Personal tools

FFCP PHASE1:Mm9::chr3:146184360..146184394,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:146184360..146184394,-
|short_description=p1@Rpf1
|description=CAGE_peak_1_at_Rpf1_5end
|association_with_transcript=0bp_to_ENSMUST00000029838,NM_027332,NM_027371,uc008rrl.2,uc008rrm.2_5end
|EntrezGene=70285
|EntrezGene=70285
|HGNC=
|HGNC=
|UniProt=Q7TND5
|UniProt=Q7TND5
|association_with_transcript=0bp_to_ENSMUST00000029838,NM_027332,NM_027371,uc008rrl.2,uc008rrm.2_5end
|description=CAGE_peak_1_at_Rpf1_5end
|id=chr3:146184360..146184394,-
|ontology_enrichment_disease=
|phase1_expression=35.5530440572643,30.0118850569851,29.1199513209303,28.431635862842,25.0447864973174,50.3637815735669,52.0956188528022,62.3665652222813,127.55458226941,107.669682108117,143.138221436522,127.396137915552,77.8963321186986,73.7828196416338,54.9631106995843,60.1351544147783,55.2653883721236,66.5625168905882,68.2829879356579,61.5364995107144,35.4630519929961,50.6383851124515,57.4639536105658,37.9182042020374,32.5761179115381,29.285830169866,31.8763877157715,41.1550054430048,30.4037471130198,36.7963989449499,42.7939885564738,43.8171164687146,52.2805069446885,31.6963362030877,63.8362079650317,56.5197794218874,55.329895547102,43.5272895966384,53.1308034276184,66.4875154846724,32.9409633297368,38.250547157673,43.2104214197727,22.031943145726,27.4731483604884,21.2914232507551,7.82391344348039,9.59310688073965,10.1055644057857,9.91592485278845,9.09911740564856,12.9377307928474,63.2540424837666,66.0079549230323,74.612823409627,35.2445427369247,33.2378790328958,28.8776371675368,24.8849246857305,14.8117474196169,14.5781222806421,7.11573517345177,10.6715375533337,8.54904731417329,12.8552627133707,11.3676818391376,8.08920298399693,12.2949857702897,38.9872942279876,26.7311757896748,34.703618622978,14.2825492201902,14.1355866209033,35.7673133707666,31.7248509070362,32.1726575313507,14.3150645299205,16.98241596533,20.5832754563366,23.6076455037047,21.4995962465663,29.6920621217353,14.2383329490704,13.5063026407603,13.1406493088057,21.5078867395777,23.3489556510529,24.6047268489397,59.5965141532158,36.0476341709367,40.2911639295332,39.5794983411438,60.5174486999898,54.5100223554195,51.9821133958135,56.8994146613616,38.9031043764953,28.9731548382698,26.4981724694926,21.2003744706204,34.36579442551,34.6481489018658,71.3454671178608,42.6640021891999,43.0817171612316,43.0711771307668,42.9695778262566,45.9019196470621,101.503650389691,33.3994812895856,34.8705506799933,28.010824004717,31.1330921295679,33.0082582810243,41.9791684474466,30.7883148757705,56.854842578906,37.0174353714974,73.4226758118396,38.6622771374308,42.8432545813163,42.1841470227643,42.8701050801681,33.3770108593164,27.2280718857492,35.7639877292028,118.976418634379,112.781713426761,110.932308234785,17.9748767285787,23.7900313465686,33.0470946056833,22.4233373048037,21.2243829584174,19.5320761885986,21.5780879880118,39.4118338100724,42.795997889872,47.7646013439645,48.822510565662,50.0963705406409,44.8309103645272,61.5812483934294,45.2114453507145,47.5575129067782,51.7579429950793,46.8508622798644,45.0143865085887,48.9339343957552,54.0843389279963,49.4422658900696,36.1672958505498,34.1998116547485,34.8252166522167,30.0441919155597,34.8309966932363,108.140830846238,102.681814938771,73.5983463434585,52.402820451482,40.1039562567674,43.3949568121046,45.6917339679456,45.2557733019029,36.8698399800834,39.9958384970702,39.1679166043444,46.3558409197663,25.8358964364164,31.6843205672654,30.31973477015,26.7545976988358,28.7610651031276,32.3437469212496,21.8701546506692,34.6788543718189,26.4335026387038,37.2875298995597,49.9094506252447,44.8216776690646,52.1913218354478,47.7989953357322,39.1385357166972,37.6646739702867,32.2679761850268,34.9161784014903,29.6575546384318,36.8069473276129,32.5590025488931,29.6610404855893,33.2852596807029,40.2265371973822,41.726938209678,48.441369346525,58.6080225500018,46.8398054044223,44.9969770228892,44.8869247298039,38.1948684230514,42.0688921741866,38.9356845046609,47.2611137820496,52.7685676215125,73.4118465150814,64.0782324069042,71.2812896259986,63.9009382373784,59.570758458847,41.24938798859,47.4698626793838,49.9376498467109,48.5973701342904,37.3797336971122,34.6091081331708,25.587089195394,39.1497260818023,48.7960964779601,59.3405531276942,45.818791161318,49.8362412956375,52.6376873907744,42.7757616153474,43.6523861816614,38.6939454690594,43.0858990003685,45.6612735987249,41.6156780440344,38.3133913092381,31.09367988821,38.6717422729142,31.428666699593,36.7408608797039,58.8086007363162,38.0733978673097,42.7834917526562,54.3595390220323,18.9449696185595,18.7538698547525,45.2460449239624,35.0934588814078,38.4920027687833,41.3865068954437,37.2682478077742,37.5181012785507,37.2073785717598,44.7260918646355,39.6714487641396,34.4861912335348,39.5287777946523,29.8828824272281,45.420827266646,22.0801348547396,35.5093571390796,39.9227697593536,49.1157011857862,47.0994434140664,42.6276215320299,48.4715054972658,38.979849860262,37.5070880491592,45.4833795976069,40.7157777014806,44.2056749197054,53.4102120911529,52.7093042874994,42.2855727317566,25.5329704315341,48.4364342944224,21.3441828241545,37.0803070604655,45.7537802797066,30.6794366275561,31.4288629350051,28.9241701658869,50.4544172336977,52.7461856450912,42.7825092226626,59.6888235648158,44.2412529146781,48.5519045671655,41.0640863370789,43.9897611316764,27.9821603164657,22.0656109392507,52.9699730473343,35.7049281576375,51.8544676635193,52.9315364183182,55.7712449101783,43.0102965628263,90.5985031867249,95.0270361277638,78.4975851209127,53.4615546088464,49.3484149986571,49.4066305118242,37.1538372426996,31.3632444021703,29.9156712332263,35.8739161383623,35.8715997847958,36.3840759357801,44.457935839085,53.4351809254756,102.028421901838,47.6957781880292,32.7607811105053,37.1401769737131,28.0276816946676,33.6222689726649,49.1726829925709,37.1082496805258,40.5805662927501,50.4910812526353,61.0623613266675,61.9381796431229,39.1259665510017,45.7063759383481,61.8423117374304,60.5110231356087,63.1806708204422,61.0592883561442,61.4388433046241,73.6045420121996,58.9840683509699,65.133715598399,73.2883263162938,57.534681300917,62.9966502758657,45.5728071066575,84.5766482355186,84.7795944959545,82.4313466347625,36.8992124601484,45.419159059186,43.2237833270746,62.5955666910872,50.6587825075717,23.7195773899168,24.8575627713876,25.7802981047728,15.4667864109319,19.182310553578,21.9064230243013,25.6508550088086,25.2179873805563,30.3605414019417,24.3347346523355,64.7633048925262,61.4498305037588,44.0492702845666,39.3832881650636,49.8879327054598,43.7547550111034,34.670489537052,40.7949413333011,37.5475475222424,32.5979403175299,37.2614570838652,37.9138946186013,39.7039991672301,34.8296829082489,36.52895825577,38.1034953026459,33.4905701980632,38.7747533132047,35.8514733698877,34.7389451517178,40.1157025290936,41.7068144474443,32.4273218328356,31.2494795759506,37.4555334053016,28.76896668317,32.0123952527352,35.2513413326709,35.8522860553075,40.4022435593572,32.8619000203962,34.969091243325,34.7846386694236,39.3539576612354,36.845162697398,25.4806789496705,37.6629889597108,41.4701134313216,40.5531263985948,29.5592501620151,46.3735671240843
|phase1_expression=35.5530440572643,30.0118850569851,29.1199513209303,28.431635862842,25.0447864973174,50.3637815735669,52.0956188528022,62.3665652222813,127.55458226941,107.669682108117,143.138221436522,127.396137915552,77.8963321186986,73.7828196416338,54.9631106995843,60.1351544147783,55.2653883721236,66.5625168905882,68.2829879356579,61.5364995107144,35.4630519929961,50.6383851124515,57.4639536105658,37.9182042020374,32.5761179115381,29.285830169866,31.8763877157715,41.1550054430048,30.4037471130198,36.7963989449499,42.7939885564738,43.8171164687146,52.2805069446885,31.6963362030877,63.8362079650317,56.5197794218874,55.329895547102,43.5272895966384,53.1308034276184,66.4875154846724,32.9409633297368,38.250547157673,43.2104214197727,22.031943145726,27.4731483604884,21.2914232507551,7.82391344348039,9.59310688073965,10.1055644057857,9.91592485278845,9.09911740564856,12.9377307928474,63.2540424837666,66.0079549230323,74.612823409627,35.2445427369247,33.2378790328958,28.8776371675368,24.8849246857305,14.8117474196169,14.5781222806421,7.11573517345177,10.6715375533337,8.54904731417329,12.8552627133707,11.3676818391376,8.08920298399693,12.2949857702897,38.9872942279876,26.7311757896748,34.703618622978,14.2825492201902,14.1355866209033,35.7673133707666,31.7248509070362,32.1726575313507,14.3150645299205,16.98241596533,20.5832754563366,23.6076455037047,21.4995962465663,29.6920621217353,14.2383329490704,13.5063026407603,13.1406493088057,21.5078867395777,23.3489556510529,24.6047268489397,59.5965141532158,36.0476341709367,40.2911639295332,39.5794983411438,60.5174486999898,54.5100223554195,51.9821133958135,56.8994146613616,38.9031043764953,28.9731548382698,26.4981724694926,21.2003744706204,34.36579442551,34.6481489018658,71.3454671178608,42.6640021891999,43.0817171612316,43.0711771307668,42.9695778262566,45.9019196470621,101.503650389691,33.3994812895856,34.8705506799933,28.010824004717,31.1330921295679,33.0082582810243,41.9791684474466,30.7883148757705,56.854842578906,37.0174353714974,73.4226758118396,38.6622771374308,42.8432545813163,42.1841470227643,42.8701050801681,33.3770108593164,27.2280718857492,35.7639877292028,118.976418634379,112.781713426761,110.932308234785,17.9748767285787,23.7900313465686,33.0470946056833,22.4233373048037,21.2243829584174,19.5320761885986,21.5780879880118,39.4118338100724,42.795997889872,47.7646013439645,48.822510565662,50.0963705406409,44.8309103645272,61.5812483934294,45.2114453507145,47.5575129067782,51.7579429950793,46.8508622798644,45.0143865085887,48.9339343957552,54.0843389279963,49.4422658900696,36.1672958505498,34.1998116547485,34.8252166522167,30.0441919155597,34.8309966932363,108.140830846238,102.681814938771,73.5983463434585,52.402820451482,40.1039562567674,43.3949568121046,45.6917339679456,45.2557733019029,36.8698399800834,39.9958384970702,39.1679166043444,46.3558409197663,25.8358964364164,31.6843205672654,30.31973477015,26.7545976988358,28.7610651031276,32.3437469212496,21.8701546506692,34.6788543718189,26.4335026387038,37.2875298995597,49.9094506252447,44.8216776690646,52.1913218354478,47.7989953357322,39.1385357166972,37.6646739702867,32.2679761850268,34.9161784014903,29.6575546384318,36.8069473276129,32.5590025488931,29.6610404855893,33.2852596807029,40.2265371973822,41.726938209678,48.441369346525,58.6080225500018,46.8398054044223,44.9969770228892,44.8869247298039,38.1948684230514,42.0688921741866,38.9356845046609,47.2611137820496,52.7685676215125,73.4118465150814,64.0782324069042,71.2812896259986,63.9009382373784,59.570758458847,41.24938798859,47.4698626793838,49.9376498467109,48.5973701342904,37.3797336971122,34.6091081331708,25.587089195394,39.1497260818023,48.7960964779601,59.3405531276942,45.818791161318,49.8362412956375,52.6376873907744,42.7757616153474,43.6523861816614,38.6939454690594,43.0858990003685,45.6612735987249,41.6156780440344,38.3133913092381,31.09367988821,38.6717422729142,31.428666699593,36.7408608797039,58.8086007363162,38.0733978673097,42.7834917526562,54.3595390220323,18.9449696185595,18.7538698547525,45.2460449239624,35.0934588814078,38.4920027687833,41.3865068954437,37.2682478077742,37.5181012785507,37.2073785717598,44.7260918646355,39.6714487641396,34.4861912335348,39.5287777946523,29.8828824272281,45.420827266646,22.0801348547396,35.5093571390796,39.9227697593536,49.1157011857862,47.0994434140664,42.6276215320299,48.4715054972658,38.979849860262,37.5070880491592,45.4833795976069,40.7157777014806,44.2056749197054,53.4102120911529,52.7093042874994,42.2855727317566,25.5329704315341,48.4364342944224,21.3441828241545,37.0803070604655,45.7537802797066,30.6794366275561,31.4288629350051,28.9241701658869,50.4544172336977,52.7461856450912,42.7825092226626,59.6888235648158,44.2412529146781,48.5519045671655,41.0640863370789,43.9897611316764,27.9821603164657,22.0656109392507,52.9699730473343,35.7049281576375,51.8544676635193,52.9315364183182,55.7712449101783,43.0102965628263,90.5985031867249,95.0270361277638,78.4975851209127,53.4615546088464,49.3484149986571,49.4066305118242,37.1538372426996,31.3632444021703,29.9156712332263,35.8739161383623,35.8715997847958,36.3840759357801,44.457935839085,53.4351809254756,102.028421901838,47.6957781880292,32.7607811105053,37.1401769737131,28.0276816946676,33.6222689726649,49.1726829925709,37.1082496805258,40.5805662927501,50.4910812526353,61.0623613266675,61.9381796431229,39.1259665510017,45.7063759383481,61.8423117374304,60.5110231356087,63.1806708204422,61.0592883561442,61.4388433046241,73.6045420121996,58.9840683509699,65.133715598399,73.2883263162938,57.534681300917,62.9966502758657,45.5728071066575,84.5766482355186,84.7795944959545,82.4313466347625,36.8992124601484,45.419159059186,43.2237833270746,62.5955666910872,50.6587825075717,23.7195773899168,24.8575627713876,25.7802981047728,15.4667864109319,19.182310553578,21.9064230243013,25.6508550088086,25.2179873805563,30.3605414019417,24.3347346523355,64.7633048925262,61.4498305037588,44.0492702845666,39.3832881650636,49.8879327054598,43.7547550111034,34.670489537052,40.7949413333011,37.5475475222424,32.5979403175299,37.2614570838652,37.9138946186013,39.7039991672301,34.8296829082489,36.52895825577,38.1034953026459,33.4905701980632,38.7747533132047,35.8514733698877,34.7389451517178,40.1157025290936,41.7068144474443,32.4273218328356,31.2494795759506,37.4555334053016,28.76896668317,32.0123952527352,35.2513413326709,35.8522860553075,40.4022435593572,32.8619000203962,34.969091243325,34.7846386694236,39.3539576612354,36.845162697398,25.4806789496705,37.6629889597108,41.4701134313216,40.5531263985948,29.5592501620151,46.3735671240843
|short_description=p1@Rpf1
}}
}}

Revision as of 12:06, 18 April 2012

Short description:p1@Rpf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rpf1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000029838, NM_027332, NM_027371, uc008rrl.2, uc008rrm.2_5end
EntrezGene:Rpf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rpf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G735.55
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I530.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I629.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I328.43
CD326+ enterocyte, pool2.CNhs13197.11849-124I425.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I750.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I852.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E962.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7127.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2107.67
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6143.14
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1127.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E477.90
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E873.78
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A154.96
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A360.14
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A555.27
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A266.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A468.28
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A661.54
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A335.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H250.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I957.46
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D137.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D232.58
GP2+ M cell, pool1.CNhs13228.11845-124H929.29
GP2+ M cell, pool2.CNhs13231.11846-124I131.88
GP2+ M cell, pool3.CNhs13240.11847-124I241.16
Ileum epithelium, pool1.CNhs13199.10252-104B930.40
Ileum epithelium, pool2.CNhs13232.10253-104C136.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C842.79
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I343.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G652.28
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F563.84
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F656.52
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F755.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G843.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H153.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H366.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H238.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H443.21
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.29
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.59
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A263.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I966.01
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A174.61
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C135.24
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E133.24
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C528.88
Mouse Granule cells, donor1.CNhs12131.11713-123C324.88
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D211.37
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E812.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D538.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D934.70
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.77
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F231.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.58
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D829.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D621.51
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.35
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.60
Mouse Schwann, donor1.CNhs12507.11728-123D959.60
Mouse Schwann, donor2.CNhs12573.11746-123F936.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G340.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F739.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C460.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C854.51
Mouse hepatocyte, donor6.CNhs13090.11822-124F451.98
Mouse hepatocyte, donor8.CNhs13091.11824-124F656.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A738.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E326.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.20
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G634.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H134.65
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I871.35
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G143.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G243.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G342.97
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B645.90
accessory axillary lymph node, adult.CNhs10475.1063-29H9101.50
adrenal gland, adult.CNhs10508.49-24D733.40
adrenal gland, embryo E14.CNhs11038.406-44C534.87
adrenal gland, embryo E16.CNhs11004.1254-43D628.01
adrenal gland, embryo E17.CNhs11043.1263-45I131.13
adrenal gland, embryo E18.CNhs11026.1262-18F533.01
adrenal gland, neonate N00.CNhs11191.1311-23C141.98
adrenal gland, neonate N25.CNhs11223.1377-27I330.79
amnion, adult pregnant day17.5.CNhs10488.583-22A856.85
aorta, adult.CNhs10498.46-23H137.02
bone (os femoris), adult.CNhs10483.56-12G273.42
bone (os femoris), neonate N02.CNhs11227.1985-43F538.66
bone (os femoris), neonate N16.CNhs11225.1525-43A642.84
bone (os femoris), neonate N20.CNhs11195.1350-25C342.18
cecum, adult.CNhs10467.37-13H442.87
cerebellum, adult.CNhs10494.15-8B233.38
cerebellum, neonate N30.CNhs11135.1395-42I227.23
colon, adult.CNhs10468.36-18H735.76
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7118.98
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1112.78
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4110.93
corpora quadrigemina, adult.CNhs10501.16-22A417.97
corpus striatum, adult.CNhs10487.19-21D823.79
corpus striatum, neonate N00.CNhs11226.630-43F133.05
cortex, adult.CNhs10473.12-14D522.42
cortex, neonate N30.CNhs11107.1392-42F221.22
diencephalon, adult.CNhs10482.20-12F219.53
diencephalon, neonate N30.CNhs11201.1388-42B221.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B139.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A242.80
epididymis, adult.CNhs10490.58-23B247.76
eyeball, adult.CNhs10484.31-12G448.82
eyeball, embryo E12.CNhs11016.345-16C650.10
eyeball, embryo E14.CNhs10521.399-16E244.83
eyeball, embryo E15.CNhs10593.426-16C961.58
eyeball, embryo E17.CNhs11023.1261-18D445.21
eyeball, neonate N00.CNhs11207.633-15C647.56
eyeball, neonate N01.CNhs11140.1532-43E751.76
eyeball, neonate N02.CNhs11205.1551-44G846.85
eyeball, neonate N16.CNhs11188.777-19A245.01
forelimb, embryo E11.CNhs10596.335-25E248.93
forelimb, embryo E12.CNhs10600.359-14H254.08
forelimb, embryo E13.CNhs10589.384-1E249.44
forelimb, embryo E14.CNhs10577.413-26A836.17
forelimb, embryo E15.CNhs11007.437-20E734.20
forelimb, embryo E17.CNhs10598.1517-43C434.83
forelimb, embryo E18.CNhs11008.1520-43B530.04
gonad, embryo E13.CNhs11044.1564-45I634.83
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8108.14
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2102.68
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D573.60
heart, embryo E11.CNhs10586.331-24E952.40
heart, embryo E12.CNhs11015.353-12F540.10
heart, embryo E13.CNhs11013.376-3I943.39
heart, embryo E14.CNhs10597.403-26D445.69
heart, embryo E15.CNhs11017.431-16C845.26
heart, embryo E16.CNhs11021.457-17C636.87
heart, embryo E17.CNhs11025.479-18E540.00
heart, embryo E18.CNhs11030.1283-20G339.17
heart, neonate N00.CNhs11213.639-21E346.36
heart, neonate N03.CNhs11221.1349-25I225.84
heart, neonate N10.CNhs11118.749-24G131.68
heart, neonate N16.CNhs11209.782-15G130.32
heart, neonate N20.CNhs11127.821-26I626.75
heart, neonate N25.CNhs11196.1351-25D328.76
heart, neonate N30.CNhs11202.1390-42D232.34
hippocampus, adult.CNhs10478.13-16E821.87
hippocampus, neonate N00.CNhs11228.627-43G134.68
intestinal mucosa, adult.CNhs10506.860-29I326.43
intestine, adult.CNhs10496.178-9A337.29
intestine, embryo E12.CNhs11019.1251-16I549.91
intestine, embryo E13.CNhs11010.381-16D544.82
intestine, embryo E15.CNhs10602.976-16D852.19
intestine, embryo E16.CNhs10585.463-22H447.80
intestine, embryo E17.CNhs10582.482-18D339.14
intestine, embryo E18.CNhs10526.1289-20F737.66
intestine, neonate N00.CNhs11126.644-26D132.27
intestine, neonate N01.CNhs11192.1322-23E934.92
intestine, neonate N06.CNhs11102.688-20B829.66
intestine, neonate N07.CNhs11095.720-20F236.81
intestine, neonate N10.CNhs11098.755-23A532.56
intestine, neonate N20.CNhs11187.827-18D129.66
intestine, neonate N25.CNhs11121.1352-25E333.29
intestine, neonate N30.CNhs11131.1384-42G140.23
kidney, embryo E14.CNhs10606.411-4I941.73
kidney, embryo E15.CNhs10997.434-16F848.44
kidney, embryo E16.CNhs10584.464-22A558.61
kidney, embryo E17.CNhs11028.483-18I246.84
kidney, embryo E18.CNhs11001.1288-20C745.00
kidney, neonate N00.CNhs11214.646-21G744.89
kidney, neonate N10.CNhs11206.758-6D538.19
kidney, neonate N20.CNhs11113.832-19I142.07
kidney, neonate N25.CNhs11122.1353-25F338.94
kidney, neonate N30.CNhs11203.1385-42H147.26
liver, adult pregnant day01.CNhs10466.508-5B252.77
liver, embryo E12.CNhs10601.355-15F873.41
liver, embryo E13.CNhs10524.378-3H664.08
liver, embryo E14.CNhs10594.409-16E171.28
liver, embryo E15.CNhs10520.433-16D763.90
liver, embryo E16.CNhs10523.462-17F559.57
liver, embryo E17.CNhs10510.481-18A341.25
liver, embryo E18.CNhs10579.499-43G447.47
liver, neonate N00.CNhs11117.641-24F449.94
liver, neonate N03.CNhs11123.1345-25G248.60
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H234.61
liver, neonate N10.CNhs11115.751-24B925.59
liver, neonate N20.CNhs11220.823-25A339.15
liver, neonate N25.CNhs11198.1368-26H148.80
liver, neonate N30.CNhs11106.1382-42D159.34
lung, adult.CNhs10474.28-22B145.82
lung, embryo E12.CNhs10522.354-16G249.84
lung, embryo E14.CNhs10604.404-26F852.64
lung, embryo E15.CNhs11020.432-17C542.78
lung, embryo E16.CNhs10998.458-17B643.65
lung, embryo E17.CNhs10605.480-44A638.69
lung, embryo E18.CNhs10583.1287-20I643.09
lung, neonate N00.CNhs11224.640-42C645.66
lung, neonate N06.CNhs11212.683-20E541.62
lung, neonate N07.CNhs11111.715-19A338.31
lung, neonate N10.CNhs11219.750-23E631.09
lung, neonate N20.CNhs11109.822-18A438.67
lung, neonate N25.CNhs11119.1359-25C731.43
lung, neonate N30.CNhs11133.1394-42H236.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A158.81
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A138.07
mammary gland, adult lactating day02.CNhs10480.595-22B642.78
mammary gland, adult pregnant day19.CNhs10476.588-5H254.36
medulla oblongata, adult.CNhs10477.17-12C218.94
medulla oblongata, neonate N30.CNhs11200.1396-42A318.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C745.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C235.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E138.49
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E241.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E337.27
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D737.52
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D837.21
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D944.73
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D439.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D534.49
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D639.53
olfactory brain, adult.CNhs10489.18-22I929.88
ovary, adult.CNhs10507.91-2I745.42
ovary, embryo E18.CNhs11040.505-44H722.08
ovary, neonate N00.CNhs11217.1299-22I435.51
oviduct, adult pregnant day01.CNhs10500.988-6G639.92
pancreas, adult.CNhs10486.34-16E449.12
pancreas, embryo E14.CNhs11012.405-44F447.10
pancreas, embryo E15.CNhs11042.1556-45F242.63
pancreas, embryo E16.CNhs11003.460-26E548.47
pancreas, embryo E17.CNhs10599.1558-45G338.98
pancreas, embryo E18.CNhs10580.1535-43I737.51
pancreas, neonate N00.CNhs11105.645-26G945.48
pancreas, neonate N01.CNhs11138.1531-43D740.72
pancreas, neonate N02.CNhs11139.1539-43D844.21
pancreas, neonate N16.CNhs11136.787-43B653.41
pancreas, neonate N25.CNhs11094.1555-45E252.71
pancreas, neonate N30.CNhs11182.1548-44H542.29
pituitary gland, adult.CNhs10493.21-1G825.53
pituitary gland, embryo E12.CNhs11018.346-16E648.44
pituitary gland, embryo E13.CNhs11009.370-44C721.34
pituitary gland, embryo E14.CNhs11037.398-44A537.08
pituitary gland, embryo E15.CNhs10592.427-16B945.75
pituitary gland, embryo E16.CNhs11036.449-43F630.68
pituitary gland, embryo E17.CNhs11039.1265-44F531.43
pituitary gland, neonate N00.CNhs11190.1308-22E928.92
placenta, adult pregnant day10.CNhs10472.539-13I750.45
placenta, adult pregnant day17.CNhs10464.577-18G352.75
prostate, adult.CNhs10470.859-1F842.78
skin, adult.CNhs10492.30-1C359.69
skin, neonate N00.CNhs11124.650-25G444.24
skin, neonate N03.CNhs11215.662-22H348.55
skin, neonate N06.CNhs11097.693-20I541.06
skin, neonate N10.CNhs11108.762-6C443.99
small intestine, neonate N16.CNhs11114.790-21I127.98
spinal cord, adult.CNhs10505.24-13C922.07
spleen, adult.CNhs10465.25-2G252.97
spleen, embryo E16.CNhs11035.461-43C135.70
spleen, embryo E18.CNhs11011.1271-21F251.85
spleen, neonate N10.CNhs11116.752-24D152.93
spleen, neonate N20.CNhs11112.824-19H155.77
spleen, neonate N25.CNhs11099.1354-25G343.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C690.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C995.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D378.50
stomach, adult.CNhs10503.33-1H653.46
stomach, embryo E12.CNhs10588.356-43E349.35
stomach, embryo E15.CNhs10603.1252-16G849.41
stomach, embryo E16.CNhs11022.459-17D437.15
stomach, embryo E17.CNhs11006.1035-18D531.36
stomach, embryo E18.CNhs10999.1286-20C629.92
stomach, neonate N03.CNhs11193.1340-24B835.87
stomach, neonate N07.CNhs11210.718-18A935.87
stomach, neonate N25.CNhs11104.1355-25E436.38
stomach, neonate N30.CNhs11134.1386-42I144.46
submandibular gland, adult.CNhs10469.59-29C153.44
testis, adult.CNhs10504.57-7G5102.03
testis, embryo E13.CNhs11031.389-23F547.70
testis, embryo E15.CNhs11034.443-27C532.76
testis, embryo E16.CNhs11033.470-26G537.14
testis, embryo E17.CNhs11029.486-18I528.03
testis, embryo E18.CNhs11027.503-18G533.62
testis, neonate N00.CNhs11189.1300-22B749.17
testis, neonate N07.CNhs11222.726-26I437.11
testis, neonate N10.CNhs11204.763-44D940.58
testis, neonate N20.CNhs11110.839-18H350.49
testis, neonate N30.CNhs11130.1391-42E261.06
thymus, adult.CNhs10471.38-12B561.94
thymus, embryo E14.CNhs11041.402-44I439.13
thymus, embryo E15.CNhs11005.430-45I245.71
thymus, embryo E16.CNhs11002.456-26C561.84
thymus, embryo E17.CNhs10581.478-18C160.51
thymus, embryo E18.CNhs10595.1273-19G463.18
thymus, neonate N02.CNhs11181.1541-43F861.06
thymus, neonate N03.CNhs11137.2104-43C761.44
thymus, neonate N06.CNhs11197.681-26C473.60
thymus, neonate N07.CNhs11211.713-19D358.98
thymus, neonate N10.CNhs11194.748-24E465.13
thymus, neonate N20.CNhs11186.820-7A273.29
thymus, neonate N25.CNhs11125.1362-25G757.53
thymus, neonate N30.CNhs11132.1393-42G263.00
tongue, adult.CNhs10499.32-1B445.57
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H384.58
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F784.78
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G582.43
urinary bladder, adult.CNhs10481.879-12E436.90
uterus, adult pregnant day19.CNhs10497.590-15F545.42
uterus, adult.CNhs10509.92-27E543.22
vagina, adult.CNhs10502.89-27D562.60
vesicular gland, adult.CNhs10491.51-27F850.66
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A224.86
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.78
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.18
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.91
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A625.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.33
whole body, embryo E11.CNhs11014.324-5I864.76
whole body, embryo E12.CNhs10587.857-27C961.45
whole body, embryo E13.CNhs10512.372-23H244.05
whole body, embryo E14.5.CNhs10578.420-27D239.38
whole body, embryo E14.CNhs10519.395-14B149.89
whole body, embryo E16.CNhs10514.453-14F243.75
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G534.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G540.79
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G537.55
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G532.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G537.26
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G537.91
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G539.70
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G536.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G538.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G533.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G538.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G535.85
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G540.12
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G541.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G531.25
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G537.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G528.77
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G532.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G535.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G540.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G534.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G534.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G539.35
whole body, embryo E17.5.CNhs10513.490-9F936.85
whole body, embryo E17.CNhs10517.475-3I525.48
whole body, embryo E18.CNhs10516.493-3B337.66
whole body, neonate N00.CNhs10525.657-19C241.47
whole body, neonate N01.CNhs10576.659-23C640.55
whole body, neonate N06.CNhs10515.692-21D129.56
whole body, neonate N10.CNhs10518.761-6B446.37





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:146184360..146184394,-&oldid=881298"