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FFCP PHASE1:Mm9::chr19:8831569..8831583,+: Difference between revisions

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|description=CAGE_peak_3_at_Nxf1_5end
|description=CAGE_peak_3_at_Nxf1_5end
|id=chr19:8831569..8831583,+
|id=chr19:8831569..8831583,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=8.64803774365887,1.74487703819681,2.27499619694768,2.11724947914781,2.00358291978539,3.18970616632591,2.56973904655078,6.84353614240354,25.3419699873,29.4921303165712,10.2730780935303,10.2108363514031,6.50562773738582,9.61624426608971,5.3297561890506,9.11138703254217,6.99561878128147,6.94016763788123,5.07323404341233,7.63901373236454,7.56885282344521,5.46100231604869,6.52999472847338,1.75991665072747,1.60586496747019,1.14846392823004,1.7230479846363,1.29282739611533,1.33016393619462,2.01624103807945,0.886922042621219,8.25539875497521,6.76571266343027,0,3.46621943701529,2.99222361645286,3.67504841272264,2.09265815368454,0,4.18818995179039,4.1176204162171,2.73218193983378,4.36959317728038,10.7012295279241,10.1376931219515,5.32285581268876,2.34717403304412,0.872100625521786,2.41654801007919,1.94429899074283,2.2397827460058,2.87505128729943,7.3824346665404,7.97898356212479,9.41062637598899,6.68874533693462,4.01146815914259,5.15672092277442,10.5204559646991,14.2827564403449,7.60597684207415,1.0165335962074,3.55717918444456,4.04954872776629,3.9554654502679,1.4209602298922,2.39680088414724,2.30530983192933,12.5464430893258,12.0155285115205,9.25429829946081,5.71301968807607,4.63823935998388,9.67677313798137,13.8975932976443,11.9498442259303,6.60695285996332,4.97980618532232,4.14737639791857,14.2437190748609,13.2657083223494,9.37644067002168,4.74611098302348,5.6276261003168,5.34793867218835,4.41942878210502,5.26775218956681,8.76077395378913,6.05809546665472,7.02815508993105,7.24661221754194,1.72084775396277,2.719885334831,2.69851595818909,2.59910566979068,2.24013443548668,2.10666630197628,4.26075806445144,3.89679006904303,3.18005617059306,6.33795388995062,6.41632387071589,10.1922095882658,14.2213340630666,3.68034769719064,1.52015919285059,2.02209778005913,1.7127581957859,7.25026074212081,7.57054909230606,8.84775166507293,7.00270600117925,5.76538743140146,5.42601505989441,7.05532242814229,5.27799683584637,4.44950941921873,4.916378135277,10.6153266233985,7.76480879747564,6.40440403535141,7.75800405016355,1.86391761218122,9.66176630138106,6.0739544975902,2.55457055208591,5.75112597628417,3.59941638596045,5.08280908292259,7.18995069143149,4.11750542536764,11.5602003943835,7.12679712788333,6.64860189058859,5.40248915854856,6.32740925964255,10.1839363850316,3.85661608891288,5.30717792710717,2.10441855886474,11.1903580947925,7.81667155073808,9.72335500948886,13.1113191517072,11.4981683565744,14.3487366719032,11.056803498048,6.20888089773638,13.7963515477019,10.5899404893979,10.381116325673,10.7405908889512,9.45360647367033,9.4028084960985,10.906453229621,10.1507476077432,2.80885274925294,2.57347907114715,4.83077948972507,9.52778553663309,10.5536726991493,10.2635375032778,9.70653415899362,11.215561209602,7.25055430570678,9.06882384526591,8.31647544338819,8.29033930806903,7.73431294593358,7.22336841948019,6.89084881139774,6.14039947186396,5.26920276698522,5.50246316917524,7.14985825118033,8.54108282748061,0.330418782983798,2.64450566663544,13.2238715331845,13.7019636397659,10.4382643670896,6.85723983719365,7.11609740303585,4.37518940058886,2.37264530772256,2.30578536613615,4.02136334080431,4.37704238490532,4.67913809085888,3.59527763461689,2.37751854862164,4.77939055810481,9.10405924574792,7.31190480702264,14.6520056375005,8.75700709734851,7.37019451236978,7.5746685481544,7.01925562079256,5.46157547524528,3.92496819603437,4.07210640941942,3.85388415213294,7.84171996865642,8.64859578498093,10.5685192820881,5.68008339887808,8.92355491083942,3.8193877767213,4.89083433666378,5.99900339067631,4.66754402419738,7.18841032636773,4.46569137202204,5.61667811606209,5.30415643688935,2.51156378930677,1.4473305640901,7.7596339869974,9.28507917675375,11.7334783038259,8.99648954608497,7.04070744865506,8.20780661464897,8.33152743101048,6.82967767502296,12.2955412402829,10.1873757238436,9.72674088810671,11.9620219742489,9.32498902075836,8.67894351489069,10.5553898757491,2.71952841909355,2.95058563811422,1.93155722413313,6.90367536947505,6.09500770279457,6.88526770582037,4.29200576247434,12.9358369960665,5.85658116444958,7.75524231838076,10.7535959078648,11.8083297263669,7.64306633129848,9.71545684019746,10.2289550268959,7.11518000303742,8.03303291054518,8.51640511249612,11.3961986347043,8.79589580509311,10.3931177472697,6.63725691699814,7.28341908464944,8.76738315197778,3.39489143560617,6.496641643377,4.61152721915891,5.68542244970086,6.18007340111759,4.63446591900138,3.47640433729398,4.21674434299995,4.12542172992747,9.87274856685985,7.38250485528372,10.7367707539686,6.85878512101095,9.04435191575595,7.13475270408282,8.88564711251453,5.17590413494819,7.50949465803873,5.71946591332314,4.41056796109924,5.7710188529518,6.94297034792394,7.41848976616317,7.63983001620073,8.20704498725306,3.20628920292836,7.04616147639937,7.17657699350981,8.2554747185289,10.1856990053341,7.34636982318295,9.15851325730869,6.86334519619568,6.11922347977879,6.43776680688827,5.8043988997858,2.86401185404534,10.7554237817586,9.75933442208874,7.77638453916969,8.57262013659322,6.11415178489297,7.28267470478032,6.4469695465762,4.97336289769656,2.20345454596048,5.59205381778233,19.1655599152625,11.3632574993424,8.43838301331198,9.72255941720238,9.68698676082983,12.5027532863176,9.15386461436881,6.11960608766566,7.65473214307689,12.3207901621263,14.1134703066354,6.95224465381992,3.85177909051312,7.39518891586756,6.23619950293416,6.44496104402933,6.55648470778174,6.85114062263822,7.23678683155428,8.58214824559255,7.54447385884498,7.66279007039988,8.57629350509821,8.27421838106833,7.71387554398355,5.21479882314986,5.54964883435162,6.36968381927277,4.7007692581942,5.02292944483695,6.00583921443782,7.14291334642334,5.35920947697665,3.00943262421218,3.95326289831947,2.30162618253588,5.15605962095457,3.26521046453006,7.53590771747707,3.0215755895588,4.05013500139084,4.5032120322422,4.98456649882625,3.62432218226274,11.5203955818436,19.1531939232495,11.0976843740187,10.2104821168684,5.65955539095552,4.22840069435032,6.22290837844523,4.94484137373346,8.3438994493872,6.82282471762253,6.84394109703647,9.61994341068989,9.17686773204848,7.10679191694049,8.44301393647515,6.19181798667996,8.57544011991931,6.17309505483856,6.1812885120496,9.27353196846703,6.85738504770831,7.98641127717019,5.00715998889374,6.83128158171944,6.58765662907314,6.51532480765909,8.59761472502031,8.94437018888666,7.19761803383067,5.61142271657738,6.28765596058123,8.0773675547962,9.82154503607254,8.2116525828562,8.8737041051325,6.24526444844865,4.67863216890817,7.30561583764214,7.26895661861605,5.51478547798789,6.4922993973718
|phase1_expression=8.64803774365887,1.74487703819681,2.27499619694768,2.11724947914781,2.00358291978539,3.18970616632591,2.56973904655078,6.84353614240354,25.3419699873,29.4921303165712,10.2730780935303,10.2108363514031,6.50562773738582,9.61624426608971,5.3297561890506,9.11138703254217,6.99561878128147,6.94016763788123,5.07323404341233,7.63901373236454,7.56885282344521,5.46100231604869,6.52999472847338,1.75991665072747,1.60586496747019,1.14846392823004,1.7230479846363,1.29282739611533,1.33016393619462,2.01624103807945,0.886922042621219,8.25539875497521,6.76571266343027,0,3.46621943701529,2.99222361645286,3.67504841272264,2.09265815368454,0,4.18818995179039,4.1176204162171,2.73218193983378,4.36959317728038,10.7012295279241,10.1376931219515,5.32285581268876,2.34717403304412,0.872100625521786,2.41654801007919,1.94429899074283,2.2397827460058,2.87505128729943,7.3824346665404,7.97898356212479,9.41062637598899,6.68874533693462,4.01146815914259,5.15672092277442,10.5204559646991,14.2827564403449,7.60597684207415,1.0165335962074,3.55717918444456,4.04954872776629,3.9554654502679,1.4209602298922,2.39680088414724,2.30530983192933,12.5464430893258,12.0155285115205,9.25429829946081,5.71301968807607,4.63823935998388,9.67677313798137,13.8975932976443,11.9498442259303,6.60695285996332,4.97980618532232,4.14737639791857,14.2437190748609,13.2657083223494,9.37644067002168,4.74611098302348,5.6276261003168,5.34793867218835,4.41942878210502,5.26775218956681,8.76077395378913,6.05809546665472,7.02815508993105,7.24661221754194,1.72084775396277,2.719885334831,2.69851595818909,2.59910566979068,2.24013443548668,2.10666630197628,4.26075806445144,3.89679006904303,3.18005617059306,6.33795388995062,6.41632387071589,10.1922095882658,14.2213340630666,3.68034769719064,1.52015919285059,2.02209778005913,1.7127581957859,7.25026074212081,7.57054909230606,8.84775166507293,7.00270600117925,5.76538743140146,5.42601505989441,7.05532242814229,5.27799683584637,4.44950941921873,4.916378135277,10.6153266233985,7.76480879747564,6.40440403535141,7.75800405016355,1.86391761218122,9.66176630138106,6.0739544975902,2.55457055208591,5.75112597628417,3.59941638596045,5.08280908292259,7.18995069143149,4.11750542536764,11.5602003943835,7.12679712788333,6.64860189058859,5.40248915854856,6.32740925964255,10.1839363850316,3.85661608891288,5.30717792710717,2.10441855886474,11.1903580947925,7.81667155073808,9.72335500948886,13.1113191517072,11.4981683565744,14.3487366719032,11.056803498048,6.20888089773638,13.7963515477019,10.5899404893979,10.381116325673,10.7405908889512,9.45360647367033,9.4028084960985,10.906453229621,10.1507476077432,2.80885274925294,2.57347907114715,4.83077948972507,9.52778553663309,10.5536726991493,10.2635375032778,9.70653415899362,11.215561209602,7.25055430570678,9.06882384526591,8.31647544338819,8.29033930806903,7.73431294593358,7.22336841948019,6.89084881139774,6.14039947186396,5.26920276698522,5.50246316917524,7.14985825118033,8.54108282748061,0.330418782983798,2.64450566663544,13.2238715331845,13.7019636397659,10.4382643670896,6.85723983719365,7.11609740303585,4.37518940058886,2.37264530772256,2.30578536613615,4.02136334080431,4.37704238490532,4.67913809085888,3.59527763461689,2.37751854862164,4.77939055810481,9.10405924574792,7.31190480702264,14.6520056375005,8.75700709734851,7.37019451236978,7.5746685481544,7.01925562079256,5.46157547524528,3.92496819603437,4.07210640941942,3.85388415213294,7.84171996865642,8.64859578498093,10.5685192820881,5.68008339887808,8.92355491083942,3.8193877767213,4.89083433666378,5.99900339067631,4.66754402419738,7.18841032636773,4.46569137202204,5.61667811606209,5.30415643688935,2.51156378930677,1.4473305640901,7.7596339869974,9.28507917675375,11.7334783038259,8.99648954608497,7.04070744865506,8.20780661464897,8.33152743101048,6.82967767502296,12.2955412402829,10.1873757238436,9.72674088810671,11.9620219742489,9.32498902075836,8.67894351489069,10.5553898757491,2.71952841909355,2.95058563811422,1.93155722413313,6.90367536947505,6.09500770279457,6.88526770582037,4.29200576247434,12.9358369960665,5.85658116444958,7.75524231838076,10.7535959078648,11.8083297263669,7.64306633129848,9.71545684019746,10.2289550268959,7.11518000303742,8.03303291054518,8.51640511249612,11.3961986347043,8.79589580509311,10.3931177472697,6.63725691699814,7.28341908464944,8.76738315197778,3.39489143560617,6.496641643377,4.61152721915891,5.68542244970086,6.18007340111759,4.63446591900138,3.47640433729398,4.21674434299995,4.12542172992747,9.87274856685985,7.38250485528372,10.7367707539686,6.85878512101095,9.04435191575595,7.13475270408282,8.88564711251453,5.17590413494819,7.50949465803873,5.71946591332314,4.41056796109924,5.7710188529518,6.94297034792394,7.41848976616317,7.63983001620073,8.20704498725306,3.20628920292836,7.04616147639937,7.17657699350981,8.2554747185289,10.1856990053341,7.34636982318295,9.15851325730869,6.86334519619568,6.11922347977879,6.43776680688827,5.8043988997858,2.86401185404534,10.7554237817586,9.75933442208874,7.776384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|short_description=p3@Nxf1
|short_description=p3@Nxf1
}}
}}

Revision as of 11:38, 18 April 2012

Short description:p3@Nxf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nxf1_5end
Coexpression cluster:NA
Association with transcript: -9bp_to_ENSMUST00000010241, NM_016813, uc008gmr.1_5end
EntrezGene:Nxf1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Nxf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E725.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F229.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.27
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.21
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.11
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.32
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.55
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F512.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D96.06
Mouse Schwann, donor2.CNhs12573.11746-123F97.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H97.25
adrenal gland, adult.CNhs10508.49-24D77.57
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C17.06
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H14.92
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F57.76
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B29.66
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.08
corpora quadrigemina, adult.CNhs10501.16-22A47.19
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F111.56
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C611.19
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C99.72
eyeball, embryo E17.CNhs11023.1261-18D413.11
eyeball, neonate N00.CNhs11207.633-15C611.50
eyeball, neonate N01.CNhs11140.1532-43E714.35
eyeball, neonate N02.CNhs11205.1551-44G811.06
eyeball, neonate N16.CNhs11188.777-19A26.21
forelimb, embryo E11.CNhs10596.335-25E213.80
forelimb, embryo E12.CNhs10600.359-14H210.59
forelimb, embryo E13.CNhs10589.384-1E210.38
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E79.45
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B510.91
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F510.55
heart, embryo E13.CNhs11013.376-3I910.26
heart, embryo E14.CNhs10597.403-26D49.71
heart, embryo E15.CNhs11017.431-16C811.22
heart, embryo E16.CNhs11021.457-17C67.25
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E38.29
heart, neonate N03.CNhs11221.1349-25I27.73
heart, neonate N10.CNhs11118.749-24G17.22
heart, neonate N16.CNhs11209.782-15G16.89
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D35.27
heart, neonate N30.CNhs11202.1390-42D25.50
hippocampus, adult.CNhs10478.13-16E87.15
hippocampus, neonate N00.CNhs11228.627-43G18.54
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I513.22
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D810.44
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F74.38
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I99.10
kidney, embryo E15.CNhs10997.434-16F87.31
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I28.76
kidney, embryo E18.CNhs11001.1288-20C77.37
kidney, neonate N00.CNhs11214.646-21G77.57
kidney, neonate N10.CNhs11206.758-6D57.02
kidney, neonate N20.CNhs11113.832-19I15.46
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F87.84
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E110.57
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F46.00
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B17.76
lung, embryo E12.CNhs10522.354-16G29.29
lung, embryo E14.CNhs10604.404-26F811.73
lung, embryo E15.CNhs11020.432-17C59.00
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A68.21
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E512.30
lung, neonate N07.CNhs11111.715-19A310.19
lung, neonate N10.CNhs11219.750-23E69.73
lung, neonate N20.CNhs11109.822-18A411.96
lung, neonate N25.CNhs11119.1359-25C79.32
lung, neonate N30.CNhs11133.1394-42H28.68
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A36.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I78.52
ovary, embryo E18.CNhs11040.505-44H711.40
ovary, neonate N00.CNhs11217.1299-22I48.80
oviduct, adult pregnant day01.CNhs10500.988-6G610.39
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G36.50
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C710.74
pituitary gland, embryo E14.CNhs11037.398-44A56.86
pituitary gland, embryo E15.CNhs10592.427-16B99.04
pituitary gland, embryo E16.CNhs11036.449-43F67.13
pituitary gland, embryo E17.CNhs11039.1265-44F58.89
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I77.51
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G46.94
skin, neonate N03.CNhs11215.662-22H37.42
skin, neonate N06.CNhs11097.693-20I57.64
skin, neonate N10.CNhs11108.762-6C48.21
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G27.18
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F210.19
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H19.16
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.80
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E310.76
stomach, embryo E15.CNhs10603.1252-16G89.76
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B87.28
stomach, neonate N07.CNhs11210.718-18A96.45
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G519.17
testis, embryo E13.CNhs11031.389-23F511.36
testis, embryo E15.CNhs11034.443-27C58.44
testis, embryo E16.CNhs11033.470-26G59.72
testis, embryo E17.CNhs11029.486-18I59.69
testis, embryo E18.CNhs11027.503-18G512.50
testis, neonate N00.CNhs11189.1300-22B79.15
testis, neonate N07.CNhs11222.726-26I46.12
testis, neonate N10.CNhs11204.763-44D97.65
testis, neonate N20.CNhs11110.839-18H312.32
testis, neonate N30.CNhs11130.1391-42E214.11
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I27.40
thymus, embryo E16.CNhs11002.456-26C56.24
thymus, embryo E17.CNhs10581.478-18C16.44
thymus, embryo E18.CNhs10595.1273-19G46.56
thymus, neonate N02.CNhs11181.1541-43F86.85
thymus, neonate N03.CNhs11137.2104-43C77.24
thymus, neonate N06.CNhs11197.681-26C48.58
thymus, neonate N07.CNhs11211.713-19D37.54
thymus, neonate N10.CNhs11194.748-24E47.66
thymus, neonate N20.CNhs11186.820-7A28.58
thymus, neonate N25.CNhs11125.1362-25G78.27
thymus, neonate N30.CNhs11132.1393-42G27.71
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.37
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.70
urinary bladder, adult.CNhs10481.879-12E45.02
uterus, adult pregnant day19.CNhs10497.590-15F56.01
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I811.52
whole body, embryo E12.CNhs10587.857-27C919.15
whole body, embryo E13.CNhs10512.372-23H211.10
whole body, embryo E14.5.CNhs10578.420-27D210.21
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.21
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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