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FFCP PHASE1:Mm9::chr3:116210953..116210988,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:116210953..116210988,-
|short_description=p2@Rtcd1
|description=CAGE_peak_2_at_Rtcd1_5end
|association_with_transcript=0bp_to_ENSMUST00000153005_5end
|EntrezGene=66368
|EntrezGene=66368
|HGNC=
|HGNC=
|UniProt=D3Z263
|UniProt=D3Z263
|association_with_transcript=0bp_to_ENSMUST00000153005_5end
|description=CAGE_peak_2_at_Rtcd1_5end
|id=chr3:116210953..116210988,-
|ontology_enrichment_disease=
|phase1_expression=9.28863313207805,10.4692622291808,8.18998630901165,6.65421264875026,6.01074875935617,4.53274034162102,7.94282978024787,5.16493293766305,11.403886494285,14.0438715793196,3.4243593645101,5.90313976565489,4.45121897821135,6.03200776691082,7.66152452176024,6.07425802169478,4.89693314689703,5.52058789376916,4.79900517620086,8.06340338416257,13.2667532635669,11.5177503393027,9.66439219814061,7.03966660290989,6.65286915094793,5.16808767703518,7.32295393470427,7.75696437669201,10.2612646506442,5.79669298447841,8.86922042621219,10.7955214488137,11.6862309641068,31.6963362030877,2.59966457776147,6.31691652362271,5.51257261908397,3.76678467663217,7.0320181007142,5.75876118371178,5.29408339227913,0.683045484958446,4.36959317728038,5.41356317294982,6.18399280439039,7.34187008646726,7.82391344348039,6.75877984779384,9.22681967484782,11.0825042472342,7.69925318939494,5.75010257459886,5.03347818173209,2.17608642603403,7.73015738027667,11.5766746216176,9.45560351797897,7.21940929188419,12.3413041124355,15.340738398889,16.4796164911607,6.43804610931351,6.22506357277798,3.5995988691256,0,1.4209602298922,5.99200221036809,4.99483796918021,9.85051316930538,9.72042755988173,9.67494822216357,12.5686433137674,15.4607978666129,11.7591167246356,9.4887016308054,11.9498442259303,9.91042928994498,12.896421146604,11.981309593987,15.0350368012421,12.4423195299277,13.022834263919,15.355064945076,11.8180148106653,9.62628960993904,14.142172102736,14.5219114415085,16.5895506784518,11.4346551933108,12.1670211771925,4.05810284182349,6.88339101585109,4.0798280022465,4.31762553310254,3.24888208723835,2.68816132258401,6.17955448579708,5.62420064507591,7.53379413348319,5.3000936176551,9.15482228548423,3.84979432242953,0,0,7.57718643539249,3.54703811665138,4.54972000513305,4.68153906848146,3.10725460376606,3.85949561568544,6.24547176358089,8.22056791442781,7.37969591219387,5.12456977878917,5.64425794251383,4.90099706185734,3.95511948374998,2.89198713839823,2.65383165584962,8.25010934731787,7.72945314611377,3.39412677194655,7.45567044872489,6.14839673724249,5.86450779077674,3.32094171771169,11.0229914545447,17.3971791988088,10.6738990741374,8.83764772488454,10.980014467647,11.6858547464964,9.56033761057521,9.2057564638919,12.259494629014,11.0324058886075,6.21220119486929,6.46916247172484,6.57079171927554,1.47309299120532,7.67710613479952,11.0353010128067,9.90341713929421,5.72678307775717,7.68812440410005,6.91814089538189,7.02762934197966,2.84573707812917,10.1316956678436,8.88798576788751,5.63043597324636,6.79506770525482,5.00485048606076,2.78601733217733,1.85203922767149,7.16523360546575,13.3420505589515,13.1247432628505,9.94572247884574,14.2916783049496,10.3191466391682,5.94204802821349,7.10234206755631,8.46086196513836,6.63348585415727,4.65067889500816,5.90201483079162,5.60473643362414,5.26591519723137,3.94001913789829,4.62092214411378,1.60819986167866,3.29325172936576,4.02619256281115,8.62188789112922,8.23236899034275,5.94753809370836,5.02456076660734,7.89166526980366,8.82499353069666,5.54130083685001,4.43703754171354,5.11469500843202,7.60902504450237,6.16887780007865,7.24675400785648,8.29406189040889,7.75930240960488,6.62877896205008,4.49409704327111,4.75503709724327,8.16479220342906,9.48339504765408,6.85491075658373,5.63538678365402,8.14605311381257,8.33995694820791,6.24208797023835,4.67950374719504,4.28069429140846,5.33795674660674,5.92306386824642,3.26097889795864,6.00642380577939,9.04171377520734,3.82265591054251,6.8972441272091,5.788251834058,4.07401362850272,4.60313819921297,4.86405680325106,3.0201755450689,4.31304619582064,2.97712758134803,5.30464044294753,3.03094653536534,2.33216637578486,4.3419916922703,2.58654466233247,13.0749074121634,6.84452901056509,7.46878377410828,4.22442446919304,2.68010011906905,3.09456733151818,5.46374214001837,3.4679731703362,5.97954662051692,3.82691444777969,3.93271955317771,1.89953480052485,4.05017364028232,3.01582567878545,2.17562273527484,6.39293554924747,3.58717770196152,15.412856638828,13.0104972117346,9.01642199571715,8.58401152494868,13.566853434899,14.055794794679,12.2791336707695,6.4521575447189,11.3627323782021,10.190755108398,14.5731852602962,9.05993159525067,9.88219444866309,3.53453448063988,3.97432238583152,4.98583690268315,6.35259141478947,4.45419332025846,0,8.49732226542435,7.25576536715402,3.96070667487386,3.54362271456927,3.3817866273832,5.42699415653264,3.27180356529755,2.49548164869305,2.52829406348653,3.16255825724996,2.06271086496374,4.76615448055303,10.0834212657534,9.44318391614108,10.0738406464848,7.98031051390231,8.02659679209317,6.41741180348272,7.91608867697958,6.33613611772018,4.02480934641258,3.52845436887939,1.81374878235628,4.52100394748536,2.89502039655148,4.05865969610664,2.46211349617592,6.12109756922687,16.8737024829564,5.29699730473343,6.60437977482312,6.2966139305702,5.83942216714542,3.69074414846768,4.11800711771741,6.96911562974807,7.27747552083022,9.39759821870082,5.72802370809068,11.3880957689209,5.89626454667861,6.91234181259528,3.13632444021703,2.40198820120795,4.45052343069908,4.29797969771747,5.49687478166462,12.3134224627203,3.10669656543463,54.1145221136823,6.13017838780313,8.60384150376908,4.4723773319131,8.52454834953025,3.71703476079712,7.51086327332825,7.55185432094911,8.91304427618542,14.2534631287344,28.8030006257865,5.05617793005085,8.71718425747706,6.57350125854894,4.41730798124503,5.90788095702689,5.56307793387542,6.49055427407832,5.31682297828478,6.25991989678515,4.64861520595499,4.94048307170519,4.97035191772737,4.61816839873581,6.07759891344159,2.26730383615211,12.8751852956958,10.1376657968708,12.4234616109418,3.67060228661162,4.31669693537719,2.56412273974171,3.00115730710692,1.50471631210609,14.1187960654267,19.3336599333014,12.0308057822273,14.7793736815571,12.3314853558716,9.82012066606611,13.5004500046361,9.45674526770863,9.5159905886683,10.8729665467882,11.1052461915069,9.97562183502578,9.39034831647738,5.34834777550247,9.64220548088719,8.45680138870065,5.55616819504038,7.41726206060019,6.73930340142812,5.55933865880354,5.57654459758527,6.97917463128482,6.18033949301224,6.85069130732101,4.65227298540468,3.81034953026459,6.37363792696705,7.33055037762079,5.35711671044299,5.2991611248383,7.20025430009372,4.96932257246145,5.96090474868302,4.21504608233753,6.30532848782715,6.51532480765909,8.04883080640199,4.47218509444333,6.92600980613895,8.41713407486608,6.16902094245706,4.72821515402705,7.7753898202241,6.97215785336847,6.36591816237767,5.24602213669686,4.67863216890817,6.44613162144895,7.07766828654721,6.39715115446595,5.56482805489012
|phase1_expression=9.28863313207805,10.4692622291808,8.18998630901165,6.65421264875026,6.01074875935617,4.53274034162102,7.94282978024787,5.16493293766305,11.403886494285,14.0438715793196,3.4243593645101,5.90313976565489,4.45121897821135,6.03200776691082,7.66152452176024,6.07425802169478,4.89693314689703,5.52058789376916,4.79900517620086,8.06340338416257,13.2667532635669,11.5177503393027,9.66439219814061,7.03966660290989,6.65286915094793,5.16808767703518,7.32295393470427,7.75696437669201,10.2612646506442,5.79669298447841,8.86922042621219,10.7955214488137,11.6862309641068,31.6963362030877,2.59966457776147,6.31691652362271,5.51257261908397,3.76678467663217,7.0320181007142,5.75876118371178,5.29408339227913,0.683045484958446,4.36959317728038,5.41356317294982,6.18399280439039,7.34187008646726,7.82391344348039,6.75877984779384,9.22681967484782,11.0825042472342,7.69925318939494,5.75010257459886,5.03347818173209,2.17608642603403,7.73015738027667,11.5766746216176,9.45560351797897,7.21940929188419,12.3413041124355,15.340738398889,16.4796164911607,6.43804610931351,6.22506357277798,3.5995988691256,0,1.4209602298922,5.99200221036809,4.99483796918021,9.85051316930538,9.72042755988173,9.67494822216357,12.5686433137674,15.4607978666129,11.7591167246356,9.4887016308054,11.9498442259303,9.91042928994498,12.896421146604,11.981309593987,15.0350368012421,12.4423195299277,13.022834263919,15.355064945076,11.8180148106653,9.62628960993904,14.142172102736,14.5219114415085,16.5895506784518,11.4346551933108,12.1670211771925,4.05810284182349,6.88339101585109,4.0798280022465,4.31762553310254,3.24888208723835,2.68816132258401,6.17955448579708,5.62420064507591,7.53379413348319,5.3000936176551,9.15482228548423,3.84979432242953,0,0,7.57718643539249,3.54703811665138,4.54972000513305,4.68153906848146,3.10725460376606,3.85949561568544,6.24547176358089,8.22056791442781,7.37969591219387,5.12456977878917,5.64425794251383,4.90099706185734,3.95511948374998,2.89198713839823,2.65383165584962,8.25010934731787,7.72945314611377,3.39412677194655,7.45567044872489,6.14839673724249,5.86450779077674,3.32094171771169,11.0229914545447,17.3971791988088,10.6738990741374,8.83764772488454,10.980014467647,11.6858547464964,9.56033761057521,9.2057564638919,12.259494629014,11.0324058886075,6.21220119486929,6.46916247172484,6.57079171927554,1.47309299120532,7.67710613479952,11.0353010128067,9.90341713929421,5.72678307775717,7.68812440410005,6.91814089538189,7.02762934197966,2.84573707812917,10.1316956678436,8.88798576788751,5.63043597324636,6.79506770525482,5.00485048606076,2.78601733217733,1.85203922767149,7.16523360546575,13.3420505589515,13.1247432628505,9.94572247884574,14.2916783049496,10.3191466391682,5.94204802821349,7.10234206755631,8.46086196513836,6.63348585415727,4.65067889500816,5.90201483079162,5.60473643362414,5.26591519723137,3.94001913789829,4.62092214411378,1.60819986167866,3.29325172936576,4.02619256281115,8.62188789112922,8.23236899034275,5.94753809370836,5.02456076660734,7.89166526980366,8.82499353069666,5.54130083685001,4.43703754171354,5.11469500843202,7.60902504450237,6.16887780007865,7.24675400785648,8.29406189040889,7.75930240960488,6.62877896205008,4.49409704327111,4.75503709724327,8.16479220342906,9.48339504765408,6.85491075658373,5.63538678365402,8.14605311381257,8.33995694820791,6.24208797023835,4.67950374719504,4.28069429140846,5.33795674660674,5.92306386824642,3.26097889795864,6.00642380577939,9.04171377520734,3.82265591054251,6.8972441272091,5.788251834058,4.07401362850272,4.60313819921297,4.86405680325106,3.0201755450689,4.31304619582064,2.97712758134803,5.30464044294753,3.03094653536534,2.33216637578486,4.3419916922703,2.58654466233247,13.0749074121634,6.84452901056509,7.46878377410828,4.22442446919304,2.68010011906905,3.09456733151818,5.46374214001837,3.4679731703362,5.97954662051692,3.82691444777969,3.93271955317771,1.89953480052485,4.05017364028232,3.01582567878545,2.17562273527484,6.39293554924747,3.58717770196152,15.412856638828,13.0104972117346,9.01642199571715,8.58401152494868,13.566853434899,14.055794794679,12.2791336707695,6.4521575447189,11.3627323782021,10.190755108398,14.5731852602962,9.05993159525067,9.88219444866309,3.53453448063988,3.97432238583152,4.98583690268315,6.35259141478947,4.45419332025846,0,8.49732226542435,7.25576536715402,3.96070667487386,3.54362271456927,3.3817866273832,5.42699415653264,3.27180356529755,2.49548164869305,2.52829406348653,3.16255825724996,2.06271086496374,4.76615448055303,10.0834212657534,9.44318391614108,10.0738406464848,7.98031051390231,8.02659679209317,6.41741180348272,7.91608867697958,6.33613611772018,4.02480934641258,3.52845436887939,1.81374878235628,4.52100394748536,2.89502039655148,4.05865969610664,2.46211349617592,6.12109756922687,16.8737024829564,5.29699730473343,6.60437977482312,6.2966139305702,5.83942216714542,3.69074414846768,4.11800711771741,6.96911562974807,7.27747552083022,9.39759821870082,5.72802370809068,11.3880957689209,5.89626454667861,6.91234181259528,3.13632444021703,2.40198820120795,4.45052343069908,4.29797969771747,5.49687478166462,12.3134224627203,3.10669656543463,54.1145221136823,6.13017838780313,8.60384150376908,4.4723773319131,8.52454834953025,3.71703476079712,7.51086327332825,7.55185432094911,8.91304427618542,14.2534631287344,28.8030006257865,5.05617793005085,8.71718425747706,6.57350125854894,4.41730798124503,5.90788095702689,5.56307793387542,6.49055427407832,5.31682297828478,6.25991989678515,4.64861520595499,4.94048307170519,4.97035191772737,4.61816839873581,6.07759891344159,2.26730383615211,12.8751852956958,10.1376657968708,12.4234616109418,3.67060228661162,4.31669693537719,2.56412273974171,3.00115730710692,1.50471631210609,14.1187960654267,19.3336599333014,12.0308057822273,14.7793736815571,12.3314853558716,9.82012066606611,13.5004500046361,9.45674526770863,9.5159905886683,10.8729665467882,11.1052461915069,9.97562183502578,9.39034831647738,5.34834777550247,9.64220548088719,8.45680138870065,5.55616819504038,7.41726206060019,6.73930340142812,5.55933865880354,5.57654459758527,6.97917463128482,6.18033949301224,6.85069130732101,4.65227298540468,3.81034953026459,6.37363792696705,7.33055037762079,5.35711671044299,5.2991611248383,7.20025430009372,4.96932257246145,5.96090474868302,4.21504608233753,6.30532848782715,6.51532480765909,8.04883080640199,4.47218509444333,6.92600980613895,8.41713407486608,6.16902094245706,4.72821515402705,7.7753898202241,6.97215785336847,6.36591816237767,5.24602213669686,4.67863216890817,6.44613162144895,7.07766828654721,6.39715115446595,5.56482805489012
|short_description=p2@Rtcd1
}}
}}

Revision as of 11:37, 18 April 2012

Short description:p2@Rtcd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rtcd1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000153005_5end
EntrezGene:Rtcd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rtcd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.90
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.45
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.07
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I27.76
Ileum epithelium, pool1.CNhs13199.10252-104B910.26
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.34
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.58
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C312.34
Mouse Granule cells, donor2.CNhs12357.11731-123E315.34
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.85
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.52
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.59
Mouse Schwann, donor1.CNhs12507.11728-123D911.43
Mouse Schwann, donor2.CNhs12573.11746-123F912.17
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.15
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.68
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C56.25
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I17.38
adrenal gland, embryo E18.CNhs11026.1262-18F55.12
adrenal gland, neonate N00.CNhs11191.1311-23C15.64
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F58.25
bone (os femoris), neonate N16.CNhs11225.1525-43A67.73
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.02
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D117.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.67
corpora quadrigemina, adult.CNhs10501.16-22A48.84
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F111.69
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F29.21
diencephalon, adult.CNhs10482.20-12F212.26
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.47
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C67.68
eyeball, embryo E14.CNhs10521.399-16E211.04
eyeball, embryo E15.CNhs10593.426-16C99.90
eyeball, embryo E17.CNhs11023.1261-18D45.73
eyeball, neonate N00.CNhs11207.633-15C67.69
eyeball, neonate N01.CNhs11140.1532-43E76.92
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E210.13
forelimb, embryo E12.CNhs10600.359-14H28.89
forelimb, embryo E13.CNhs10589.384-1E25.63
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.95
heart, embryo E11.CNhs10586.331-24E914.29
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C88.46
heart, embryo E16.CNhs11021.457-17C66.63
heart, embryo E17.CNhs11025.479-18E54.65
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E35.60
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G14.62
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E88.62
hippocampus, neonate N00.CNhs11228.627-43G18.23
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I57.89
intestine, embryo E13.CNhs11010.381-16D58.82
intestine, embryo E15.CNhs10602.976-16D85.54
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F77.61
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E97.25
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F27.76
intestine, neonate N10.CNhs11098.755-23A56.63
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G18.16
kidney, embryo E14.CNhs10606.411-4I99.48
kidney, embryo E15.CNhs10997.434-16F86.85
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I28.15
kidney, embryo E18.CNhs11001.1288-20C78.34
kidney, neonate N00.CNhs11214.646-21G76.24
kidney, neonate N10.CNhs11206.758-6D54.68
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F35.34
kidney, neonate N30.CNhs11203.1385-42H15.92
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F86.01
liver, embryo E13.CNhs10524.378-3H69.04
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F44.86
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G213.07
lung, embryo E14.CNhs10604.404-26F86.84
lung, embryo E15.CNhs11020.432-17C57.47
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C65.46
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C215.41
medulla oblongata, neonate N30.CNhs11200.1396-42A313.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.58
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E113.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.36
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F27.26
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E610.08
pituitary gland, embryo E13.CNhs11009.370-44C79.44
pituitary gland, embryo E14.CNhs11037.398-44A510.07
pituitary gland, embryo E15.CNhs10592.427-16B97.98
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F56.42
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H32.90
skin, neonate N06.CNhs11097.693-20I54.06
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C916.87
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F26.30
spleen, neonate N10.CNhs11116.752-24D15.84
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.40
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E311.39
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D46.91
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A94.30
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I112.31
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G554.11
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C58.60
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I58.52
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B77.51
testis, neonate N07.CNhs11222.726-26I47.55
testis, neonate N10.CNhs11204.763-44D98.91
testis, neonate N20.CNhs11110.839-18H314.25
testis, neonate N30.CNhs11130.1391-42E228.80
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I26.57
thymus, embryo E16.CNhs11002.456-26C54.42
thymus, embryo E17.CNhs10581.478-18C15.91
thymus, embryo E18.CNhs10595.1273-19G45.56
thymus, neonate N02.CNhs11181.1541-43F86.49
thymus, neonate N03.CNhs11137.2104-43C75.32
thymus, neonate N06.CNhs11197.681-26C46.26
thymus, neonate N07.CNhs11211.713-19D34.65
thymus, neonate N10.CNhs11194.748-24E44.94
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G74.62
thymus, neonate N30.CNhs11132.1393-42G26.08
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.42
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A412.33
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I811.11
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H29.39
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B19.64
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.97
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D16.40
whole body, neonate N10.CNhs10518.761-6B45.56





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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