Personal tools

FFCP PHASE1:Mm9::chr2:5816371..5816454,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr2:5816371..5816454,-
|short_description=p1@Sec61a2
|description=CAGE_peak_1_at_Sec61a2_5end
|association_with_transcript=0bp_to_ENSMUST00000026925,NM_021305,uc008ifx.1,uc008ify.1,uc008ifz.1,uc012boy.1_5end
|EntrezGene=57743
|EntrezGene=57743
|HGNC=
|HGNC=
|UniProt=Q9CYJ6,A2ATT8,Q9JLR1,P61620,A2ATT9,Q3TTK6
|UniProt=Q9CYJ6,A2ATT8,Q9JLR1,P61620,A2ATT9,Q3TTK6
|association_with_transcript=0bp_to_ENSMUST00000026925,NM_021305,uc008ifx.1,uc008ify.1,uc008ifz.1,uc012boy.1_5end
|description=CAGE_peak_1_at_Sec61a2_5end
|id=chr2:5816371..5816454,-
|ontology_enrichment_disease=
|phase1_expression=36.1936394456834,10.1202868215415,9.09998478779072,19.3577095236371,16.5295590882295,12.5909453933917,10.2789561862031,6.71441281896197,13.2341398822567,11.2350972634557,7.53359060192222,11.8062795313098,7.53283211697305,6.29426897416781,9.32707333083856,6.47920855647443,6.99561878128147,5.52058789376916,8.5010948835558,8.06340338416257,30.8707143248383,9.4326403640841,8.35839325244593,6.23970448894286,5.27641346454491,7.46501553349526,7.32295393470427,9.48073423817912,8.36103045608045,9.57714493087737,11.7517170647311,8.89042942843484,9.84103660135312,15.8481681015439,20.5084650023405,13.2987716286794,16.3335485009895,2.51118978442145,2.3440060335714,4.18818995179039,0.588231488031014,1.36609096991689,2.42755176515577,23.1650145075062,25.2428558736591,25.8800920547971,17.2126095756569,10.0291571935005,13.4008571468028,13.4156630361256,16.3784113301674,14.3752564364972,7.88578248471361,7.25362142011344,3.6970317905671,15.6928255981928,14.6132054368766,14.4388185837684,33.3822160418336,37.5583595283143,40.5652098243955,16.9422266034566,13.3394219416671,6.29929802096979,4.94433181283487,4.9733608046227,9.28760342607055,8.4528027170742,30.0699875694585,24.7060867146994,25.6596452848686,53.4167340835113,48.8119475503066,21.313399063402,23.098758515395,16.5459381589804,27.5289702498472,33.326395240234,35.6367157154485,32.8396856448183,37.8758844513976,35.4221091978597,32.6644108831616,32.6402313818374,40.1859391653011,42.1318877227345,49.6877165988869,43.2446714314697,18.098560206631,19.8753203080846,12.7540375028738,4.30211938490693,5.439770669662,3.77792234146472,3.89865850468601,6.72040330646003,18.5386634573912,24.3715361286623,14.8078022623635,13.4269038313929,21.9715734851622,23.0987659345772,15.2883143823987,7.11066703153331,8.22665955842614,7.60079596425296,8.08839112023653,9.81981365583916,11.9111426477699,19.1490359393624,20.8182392119363,19.485790611977,21.2166257475574,24.4170677695249,27.7509348840263,17.4676561948249,12.6069433544531,21.6899035379867,8.84610551949874,23.1326595424795,24.0717255121829,16.4857586065976,22.3670113461747,26.9358333250623,34.5587066242201,9.45191104271788,6.70964697233154,10.7982491578813,9.02198612218759,47.9330046095433,28.8225379775735,22.9947464366542,44.8466746096073,53.4445305820391,35.9473317088039,45.5897949220399,26.8855920564835,20.029522268225,20.217820674694,15.3622554797126,32.1397494117878,28.5078609497506,27.0093194708024,35.2649273735573,35.5150525569931,32.6689986726367,29.0475346135159,19.1440494346872,26.7304311236724,36.3083673922213,41.7004164268559,31.1257940047156,31.6973864117182,33.7804601526502,28.6037169607041,30.253208556411,5.61770549850588,6.94839349209731,4.83077948972507,27.3406019746863,28.6121793176937,21.7875094367828,25.8051761787879,22.0375939557092,23.7571353846563,22.0907247512887,21.4618721119695,20.3171695718875,19.7471819896177,18.5509234409378,16.7001747664463,14.1813987802572,14.4903076092093,15.0311189011616,45.6329188384156,39.4124665412659,8.59088835757875,7.1401652999157,28.1540490706509,34.6032641072053,25.2580224191303,30.6558957427481,26.4629872175396,18.6421113590308,14.2358718463353,10.5407331023367,17.0907941984183,13.131127154716,15.5971269695296,8.08937467788799,9.94235029423593,12.9441827615339,26.7431740343845,32.5608260937727,37.1935527721165,20.9760867680674,25.6017283061266,27.8439204964565,18.7180149887802,10.6279306545314,14.6008816892479,13.6970851953199,8.89357881261447,14.181833985868,15.3316016188298,13.2668646307064,8.52012509831712,13.0235666266305,15.2775511068852,12.9463261852865,13.943629502653,15.1008777253445,18.6898668485561,13.3970741160661,12.4815069245824,7.57736633841335,5.74071723270119,4.3419916922703,11.4546977903295,31.645065765671,27.5410810187024,25.6315079520534,23.2343345805617,22.6133447546451,18.8054476299951,16.3912264200551,17.8127712839996,15.723992965063,18.656207932926,11.3065687153859,11.2245238212832,14.0309586824066,6.03165135757089,2.71952841909355,6.88469982226651,14.6246475541508,41.9037039868137,43.0166889793386,13.9344703570174,47.9694761688309,25.2406575533005,29.2829058222479,26.2816545234015,20.790285421872,26.9586395639697,21.7968928707401,23.074209995469,27.4720506436633,27.2748566783101,33.0960955914461,25.4072752522801,25.2853157207502,28.0165570088151,17.6518031580613,5.30980553359851,15.7807413500738,19.0463840887793,11.6935149448657,7.67784921490009,12.2974059177571,15.247269296925,18.9037539328303,15.6858846489277,6.32073515871632,9.48767477174989,5.15677716240934,18.0432991049508,26.6490419166339,24.3194325511578,22.9340627483804,28.0197569154792,24.6148968290857,25.6696472139309,13.0919928119278,23.2324990983073,19.7003825903353,8.82113592219848,13.8504452470843,28.9021323785671,20.2048298509322,16.4733834724328,15.1009627765456,15.1570035047522,48.766854428764,6.4930934703184,19.1939787205797,14.8155621895769,10.9253705062721,9.97867862363484,10.066239621087,8.15896463970505,9.93655311497972,9.39759821870082,17.184071124272,33.0571113292286,23.7883776538413,24.4092070257271,19.8633881213745,20.3077184283945,17.8020937227963,16.9439584236939,15.1818446350737,17.3684064211002,9.94142900939081,36.6400410144724,28.408143748356,25.8115245113072,30.1399341933274,20.7947315799147,27.5398484549968,29.57402413873,30.8584392080162,32.2966780831189,47.5920718027232,53.573581163963,6.63623353319174,14.798940716182,13.8659792172517,11.1731907760904,13.0689487837261,10.1327490938445,8.65407236543776,9.30444021199837,8.98601404538514,8.99240318528998,7.4611377001262,6.82205165178267,9.62118416403295,11.3370595116122,25.8472637321341,20.8666796171621,18.301626748333,21.8250001273302,15.4551675225752,12.7624083306804,17.0331010568557,15.2201549146137,11.5361583928134,54.2161768912384,44.6515479411962,49.8419096692275,47.7751846915451,36.309373547844,37.0143009720953,35.7761925122857,27.0192721934532,38.5171047636574,49.7049899281747,12.2469070149328,31.1239401252804,31.756450670269,26.7417388775123,16.3498266849826,11.2144540154509,25.3361269693841,23.9000666397117,25.6735367673452,25.7751155999073,24.8409713892435,28.1053248665254,27.9988107334948,27.4027652292841,26.5926221264489,26.1961530205691,26.6533949673168,27.0072908649187,30.906442560248,24.43502074231,29.1438864527603,23.4268064130325,24.0820551846794,22.5286945780109,27.0093921791999,31.2227903120286,21.7684287718599,27.8853894124113,24.0373281507175,19.6399795080208,28.7096743860501,24.0350936996375,23.735400503842,28.0435682546598,22.3771668738124,24.9810577937946,22.92529762765,28.1481080803271,23.7197531765366,17.2061306913222,23.4186513976626
|phase1_expression=36.1936394456834,10.1202868215415,9.09998478779072,19.3577095236371,16.5295590882295,12.5909453933917,10.2789561862031,6.71441281896197,13.2341398822567,11.2350972634557,7.53359060192222,11.8062795313098,7.53283211697305,6.29426897416781,9.32707333083856,6.47920855647443,6.99561878128147,5.52058789376916,8.5010948835558,8.06340338416257,30.8707143248383,9.4326403640841,8.35839325244593,6.23970448894286,5.27641346454491,7.46501553349526,7.32295393470427,9.48073423817912,8.36103045608045,9.57714493087737,11.7517170647311,8.89042942843484,9.84103660135312,15.8481681015439,20.5084650023405,13.2987716286794,16.3335485009895,2.51118978442145,2.3440060335714,4.18818995179039,0.588231488031014,1.36609096991689,2.42755176515577,23.1650145075062,25.2428558736591,25.8800920547971,17.2126095756569,10.0291571935005,13.4008571468028,13.4156630361256,16.3784113301674,14.3752564364972,7.88578248471361,7.25362142011344,3.6970317905671,15.6928255981928,14.6132054368766,14.4388185837684,33.3822160418336,37.5583595283143,40.5652098243955,16.9422266034566,13.3394219416671,6.29929802096979,4.94433181283487,4.9733608046227,9.28760342607055,8.4528027170742,30.0699875694585,24.7060867146994,25.6596452848686,53.4167340835113,48.8119475503066,21.313399063402,23.098758515395,16.5459381589804,27.5289702498472,33.326395240234,35.6367157154485,32.8396856448183,37.8758844513976,35.4221091978597,32.6644108831616,32.6402313818374,40.1859391653011,42.1318877227345,49.6877165988869,43.2446714314697,18.098560206631,19.8753203080846,12.7540375028738,4.30211938490693,5.439770669662,3.77792234146472,3.89865850468601,6.72040330646003,18.5386634573912,24.3715361286623,14.8078022623635,13.4269038313929,21.9715734851622,23.0987659345772,15.2883143823987,7.11066703153331,8.22665955842614,7.60079596425296,8.08839112023653,9.81981365583916,11.9111426477699,19.1490359393624,20.8182392119363,19.485790611977,21.2166257475574,24.4170677695249,27.7509348840263,17.4676561948249,12.6069433544531,21.6899035379867,8.84610551949874,23.1326595424795,24.0717255121829,16.4857586065976,22.3670113461747,26.9358333250623,34.5587066242201,9.45191104271788,6.70964697233154,10.7982491578813,9.02198612218759,47.9330046095433,28.8225379775735,22.9947464366542,44.8466746096073,53.4445305820391,35.9473317088039,45.5897949220399,26.8855920564835,20.029522268225,20.217820674694,15.3622554797126,32.1397494117878,28.5078609497506,27.0093194708024,35.2649273735573,35.5150525569931,32.6689986726367,29.0475346135159,19.1440494346872,26.7304311236724,36.3083673922213,41.7004164268559,31.1257940047156,31.6973864117182,33.7804601526502,28.6037169607041,30.253208556411,5.61770549850588,6.94839349209731,4.83077948972507,27.3406019746863,28.6121793176937,21.7875094367828,25.8051761787879,22.0375939557092,23.7571353846563,22.0907247512887,21.4618721119695,20.3171695718875,19.7471819896177,18.5509234409378,16.7001747664463,14.1813987802572,14.4903076092093,15.0311189011616,45.6329188384156,39.4124665412659,8.59088835757875,7.1401652999157,28.1540490706509,34.6032641072053,25.2580224191303,30.6558957427481,26.4629872175396,18.6421113590308,14.2358718463353,10.5407331023367,17.0907941984183,13.131127154716,15.5971269695296,8.08937467788799,9.94235029423593,12.9441827615339,26.7431740343845,32.5608260937727,37.1935527721165,20.9760867680674,25.6017283061266,27.8439204964565,18.7180149887802,10.6279306545314,14.6008816892479,13.6970851953199,8.89357881261447,14.181833985868,15.3316016188298,13.2668646307064,8.52012509831712,13.0235666266305,15.2775511068852,12.9463261852865,13.943629502653,15.1008777253445,18.6898668485561,13.3970741160661,12.4815069245824,7.57736633841335,5.74071723270119,4.3419916922703,11.4546977903295,31.645065765671,27.5410810187024,25.6315079520534,23.2343345805617,22.6133447546451,18.8054476299951,16.3912264200551,17.8127712839996,15.723992965063,18.656207932926,11.3065687153859,11.2245238212832,14.0309586824066,6.03165135757089,2.71952841909355,6.88469982226651,14.6246475541508,41.9037039868137,43.0166889793386,13.9344703570174,47.9694761688309,25.2406575533005,29.2829058222479,26.2816545234015,20.790285421872,26.9586395639697,21.7968928707401,23.074209995469,27.4720506436633,27.2748566783101,33.0960955914461,25.4072752522801,25.2853157207502,28.0165570088151,17.6518031580613,5.30980553359851,15.7807413500738,19.0463840887793,11.6935149448657,7.67784921490009,12.2974059177571,15.247269296925,18.9037539328303,15.6858846489277,6.32073515871632,9.48767477174989,5.15677716240934,18.0432991049508,26.6490419166339,24.3194325511578,22.9340627483804,28.0197569154792,24.6148968290857,25.6696472139309,13.0919928119278,23.2324990983073,19.7003825903353,8.82113592219848,13.8504452470843,28.9021323785671,20.2048298509322,16.4733834724328,15.1009627765456,15.1570035047522,48.766854428764,6.4930934703184,19.1939787205797,14.8155621895769,10.9253705062721,9.97867862363484,10.066239621087,8.15896463970505,9.93655311497972,9.39759821870082,17.184071124272,33.0571113292286,23.7883776538413,24.4092070257271,19.8633881213745,20.3077184283945,17.8020937227963,16.9439584236939,15.1818446350737,17.3684064211002,9.94142900939081,36.6400410144724,28.408143748356,25.8115245113072,30.1399341933274,20.7947315799147,27.5398484549968,29.57402413873,30.8584392080162,32.2966780831189,47.5920718027232,53.573581163963,6.63623353319174,14.798940716182,13.8659792172517,11.1731907760904,13.0689487837261,10.1327490938445,8.65407236543776,9.30444021199837,8.98601404538514,8.99240318528998,7.4611377001262,6.82205165178267,9.62118416403295,11.3370595116122,25.8472637321341,20.8666796171621,18.301626748333,21.8250001273302,15.4551675225752,12.7624083306804,17.0331010568557,15.2201549146137,11.5361583928134,54.2161768912384,44.6515479411962,49.8419096692275,47.7751846915451,36.309373547844,37.0143009720953,35.7761925122857,27.0192721934532,38.5171047636574,49.7049899281747,12.2469070149328,31.1239401252804,31.756450670269,26.7417388775123,16.3498266849826,11.2144540154509,25.3361269693841,23.9000666397117,25.6735367673452,25.7751155999073,24.8409713892435,28.1053248665254,27.9988107334948,27.4027652292841,26.5926221264489,26.1961530205691,26.6533949673168,27.0072908649187,30.906442560248,24.43502074231,29.1438864527603,23.4268064130325,24.0820551846794,22.5286945780109,27.0093921791999,31.2227903120286,21.7684287718599,27.8853894124113,24.0373281507175,19.6399795080208,28.7096743860501,24.0350936996375,23.735400503842,28.0435682546598,22.3771668738124,24.9810577937946,22.92529762765,28.1481080803271,23.7197531765366,17.2061306913222,23.4186513976626
|short_description=p1@Sec61a2
}}
}}

Revision as of 10:25, 18 April 2012

Short description:p1@Sec61a2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sec61a2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000026925, NM_021305, uc008ifx.1, uc008ify.1, uc008ifz.1, uc012boy.1_5end
EntrezGene:Sec61a2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sec61a2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G736.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.10
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.36
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.28
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.81
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.53
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.48
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.06
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A330.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.36
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I29.48
Ileum epithelium, pool1.CNhs13199.10252-104B98.36
Ileum epithelium, pool2.CNhs13232.10253-104C19.58
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D925.24
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.88
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.03
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C333.38
Mouse Granule cells, donor2.CNhs12357.11731-123E337.56
Mouse Granule cells, donor3.CNhs12108.11636-122C740.57
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.94
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C89.29
Mouse Microglia, donor2.CNhs12634.11736-123E88.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D530.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.71
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F153.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D548.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F333.33
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.64
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D432.84
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F437.88
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E432.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.19
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D642.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F649.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E143.24
Mouse Schwann, donor1.CNhs12507.11728-123D918.10
Mouse Schwann, donor2.CNhs12573.11746-123F919.88
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.75
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E314.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.23
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.82
accessory axillary lymph node, adult.CNhs10475.1063-29H911.91
adrenal gland, adult.CNhs10508.49-24D719.15
adrenal gland, embryo E14.CNhs11038.406-44C520.82
adrenal gland, embryo E16.CNhs11004.1254-43D619.49
adrenal gland, embryo E17.CNhs11043.1263-45I121.22
adrenal gland, embryo E18.CNhs11026.1262-18F524.42
adrenal gland, neonate N00.CNhs11191.1311-23C127.75
adrenal gland, neonate N25.CNhs11223.1377-27I317.47
amnion, adult pregnant day17.5.CNhs10488.583-22A812.61
aorta, adult.CNhs10498.46-23H121.69
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F523.13
bone (os femoris), neonate N16.CNhs11225.1525-43A624.07
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B226.94
cerebellum, neonate N30.CNhs11135.1395-42I234.56
colon, adult.CNhs10468.36-18H79.45
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.02
corpora quadrigemina, adult.CNhs10501.16-22A447.93
corpus striatum, adult.CNhs10487.19-21D828.82
corpus striatum, neonate N00.CNhs11226.630-43F122.99
cortex, adult.CNhs10473.12-14D544.85
cortex, neonate N30.CNhs11107.1392-42F253.44
diencephalon, adult.CNhs10482.20-12F235.95
diencephalon, neonate N30.CNhs11201.1388-42B245.59
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B126.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.03
epididymis, adult.CNhs10490.58-23B220.22
eyeball, adult.CNhs10484.31-12G415.36
eyeball, embryo E12.CNhs11016.345-16C632.14
eyeball, embryo E14.CNhs10521.399-16E228.51
eyeball, embryo E15.CNhs10593.426-16C927.01
eyeball, embryo E17.CNhs11023.1261-18D435.26
eyeball, neonate N00.CNhs11207.633-15C635.52
eyeball, neonate N01.CNhs11140.1532-43E732.67
eyeball, neonate N02.CNhs11205.1551-44G829.05
eyeball, neonate N16.CNhs11188.777-19A219.14
forelimb, embryo E11.CNhs10596.335-25E226.73
forelimb, embryo E12.CNhs10600.359-14H236.31
forelimb, embryo E13.CNhs10589.384-1E241.70
forelimb, embryo E14.CNhs10577.413-26A831.13
forelimb, embryo E15.CNhs11007.437-20E731.70
forelimb, embryo E17.CNhs10598.1517-43C433.78
forelimb, embryo E18.CNhs11008.1520-43B528.60
gonad, embryo E13.CNhs11044.1564-45I630.25
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E927.34
heart, embryo E12.CNhs11015.353-12F528.61
heart, embryo E13.CNhs11013.376-3I921.79
heart, embryo E14.CNhs10597.403-26D425.81
heart, embryo E15.CNhs11017.431-16C822.04
heart, embryo E16.CNhs11021.457-17C623.76
heart, embryo E17.CNhs11025.479-18E522.09
heart, embryo E18.CNhs11030.1283-20G321.46
heart, neonate N00.CNhs11213.639-21E320.32
heart, neonate N03.CNhs11221.1349-25I219.75
heart, neonate N10.CNhs11118.749-24G118.55
heart, neonate N16.CNhs11209.782-15G116.70
heart, neonate N20.CNhs11127.821-26I614.18
heart, neonate N25.CNhs11196.1351-25D314.49
heart, neonate N30.CNhs11202.1390-42D215.03
hippocampus, adult.CNhs10478.13-16E845.63
hippocampus, neonate N00.CNhs11228.627-43G139.41
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I528.15
intestine, embryo E13.CNhs11010.381-16D534.60
intestine, embryo E15.CNhs10602.976-16D825.26
intestine, embryo E16.CNhs10585.463-22H430.66
intestine, embryo E17.CNhs10582.482-18D326.46
intestine, embryo E18.CNhs10526.1289-20F718.64
intestine, neonate N00.CNhs11126.644-26D114.24
intestine, neonate N01.CNhs11192.1322-23E910.54
intestine, neonate N06.CNhs11102.688-20B817.09
intestine, neonate N07.CNhs11095.720-20F213.13
intestine, neonate N10.CNhs11098.755-23A515.60
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E39.94
intestine, neonate N30.CNhs11131.1384-42G112.94
kidney, embryo E14.CNhs10606.411-4I926.74
kidney, embryo E15.CNhs10997.434-16F832.56
kidney, embryo E16.CNhs10584.464-22A537.19
kidney, embryo E17.CNhs11028.483-18I220.98
kidney, embryo E18.CNhs11001.1288-20C725.60
kidney, neonate N00.CNhs11214.646-21G727.84
kidney, neonate N10.CNhs11206.758-6D518.72
kidney, neonate N20.CNhs11113.832-19I110.63
kidney, neonate N25.CNhs11122.1353-25F314.60
kidney, neonate N30.CNhs11203.1385-42H113.70
liver, adult pregnant day01.CNhs10466.508-5B28.89
liver, embryo E12.CNhs10601.355-15F814.18
liver, embryo E13.CNhs10524.378-3H615.33
liver, embryo E14.CNhs10594.409-16E113.27
liver, embryo E15.CNhs10520.433-16D78.52
liver, embryo E16.CNhs10523.462-17F513.02
liver, embryo E17.CNhs10510.481-18A315.28
liver, embryo E18.CNhs10579.499-43G412.95
liver, neonate N00.CNhs11117.641-24F413.94
liver, neonate N03.CNhs11123.1345-25G215.10
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H213.40
liver, neonate N10.CNhs11115.751-24B912.48
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B111.45
lung, embryo E12.CNhs10522.354-16G231.65
lung, embryo E14.CNhs10604.404-26F827.54
lung, embryo E15.CNhs11020.432-17C525.63
lung, embryo E16.CNhs10998.458-17B623.23
lung, embryo E17.CNhs10605.480-44A622.61
lung, embryo E18.CNhs10583.1287-20I618.81
lung, neonate N00.CNhs11224.640-42C616.39
lung, neonate N06.CNhs11212.683-20E517.81
lung, neonate N07.CNhs11111.715-19A315.72
lung, neonate N10.CNhs11219.750-23E618.66
lung, neonate N20.CNhs11109.822-18A411.31
lung, neonate N25.CNhs11119.1359-25C711.22
lung, neonate N30.CNhs11133.1394-42H214.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H214.62
medulla oblongata, adult.CNhs10477.17-12C241.90
medulla oblongata, neonate N30.CNhs11200.1396-42A343.02
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C247.97
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E125.24
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E229.28
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.28
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.79
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D826.96
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.80
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.47
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D627.27
olfactory brain, adult.CNhs10489.18-22I933.10
ovary, adult.CNhs10507.91-2I725.41
ovary, embryo E18.CNhs11040.505-44H725.29
ovary, neonate N00.CNhs11217.1299-22I428.02
oviduct, adult pregnant day01.CNhs10500.988-6G617.65
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F415.78
pancreas, embryo E15.CNhs11042.1556-45F219.05
pancreas, embryo E16.CNhs11003.460-26E511.69
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I712.30
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D718.90
pancreas, neonate N02.CNhs11139.1539-43D815.69
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G818.04
pituitary gland, embryo E12.CNhs11018.346-16E626.65
pituitary gland, embryo E13.CNhs11009.370-44C724.32
pituitary gland, embryo E14.CNhs11037.398-44A522.93
pituitary gland, embryo E15.CNhs10592.427-16B928.02
pituitary gland, embryo E16.CNhs11036.449-43F624.61
pituitary gland, embryo E17.CNhs11039.1265-44F525.67
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I723.23
placenta, adult pregnant day17.CNhs10464.577-18G319.70
prostate, adult.CNhs10470.859-1F88.82
skin, adult.CNhs10492.30-1C313.85
skin, neonate N00.CNhs11124.650-25G428.90
skin, neonate N03.CNhs11215.662-22H320.20
skin, neonate N06.CNhs11097.693-20I516.47
skin, neonate N10.CNhs11108.762-6C415.10
small intestine, neonate N16.CNhs11114.790-21I115.16
spinal cord, adult.CNhs10505.24-13C948.77
spleen, adult.CNhs10465.25-2G26.49
spleen, embryo E16.CNhs11035.461-43C119.19
spleen, embryo E18.CNhs11011.1271-21F214.82
spleen, neonate N10.CNhs11116.752-24D110.93
spleen, neonate N20.CNhs11112.824-19H19.98
spleen, neonate N25.CNhs11099.1354-25G310.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.40
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E333.06
stomach, embryo E15.CNhs10603.1252-16G823.79
stomach, embryo E16.CNhs11022.459-17D424.41
stomach, embryo E17.CNhs11006.1035-18D519.86
stomach, embryo E18.CNhs10999.1286-20C620.31
stomach, neonate N03.CNhs11193.1340-24B817.80
stomach, neonate N07.CNhs11210.718-18A916.94
stomach, neonate N25.CNhs11104.1355-25E415.18
stomach, neonate N30.CNhs11134.1386-42I117.37
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G536.64
testis, embryo E13.CNhs11031.389-23F528.41
testis, embryo E15.CNhs11034.443-27C525.81
testis, embryo E16.CNhs11033.470-26G530.14
testis, embryo E17.CNhs11029.486-18I520.79
testis, embryo E18.CNhs11027.503-18G527.54
testis, neonate N00.CNhs11189.1300-22B729.57
testis, neonate N07.CNhs11222.726-26I430.86
testis, neonate N10.CNhs11204.763-44D932.30
testis, neonate N20.CNhs11110.839-18H347.59
testis, neonate N30.CNhs11130.1391-42E253.57
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I414.80
thymus, embryo E15.CNhs11005.430-45I213.87
thymus, embryo E16.CNhs11002.456-26C511.17
thymus, embryo E17.CNhs10581.478-18C113.07
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F88.65
thymus, neonate N03.CNhs11137.2104-43C79.30
thymus, neonate N06.CNhs11197.681-26C48.99
thymus, neonate N07.CNhs11211.713-19D38.99
thymus, neonate N10.CNhs11194.748-24E47.46
thymus, neonate N20.CNhs11186.820-7A26.82
thymus, neonate N25.CNhs11125.1362-25G79.62
thymus, neonate N30.CNhs11132.1393-42G211.34
tongue, adult.CNhs10499.32-1B425.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F718.30
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.83
urinary bladder, adult.CNhs10481.879-12E415.46
uterus, adult pregnant day19.CNhs10497.590-15F512.76
uterus, adult.CNhs10509.92-27E517.03
vagina, adult.CNhs10502.89-27D515.22
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A154.22
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A349.84
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D747.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A436.31
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.02
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A949.70
whole body, embryo E11.CNhs11014.324-5I812.25
whole body, embryo E12.CNhs10587.857-27C931.12
whole body, embryo E13.CNhs10512.372-23H231.76
whole body, embryo E14.5.CNhs10578.420-27D226.74
whole body, embryo E14.CNhs10519.395-14B116.35
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G525.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.90
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.67
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G526.59
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G526.65
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.01
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.91
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G529.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.08
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.53
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G531.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G523.74
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.04
whole body, embryo E17.5.CNhs10513.490-9F922.38
whole body, embryo E17.CNhs10517.475-3I524.98
whole body, embryo E18.CNhs10516.493-3B322.93
whole body, neonate N00.CNhs10525.657-19C228.15
whole body, neonate N01.CNhs10576.659-23C623.72
whole body, neonate N06.CNhs10515.692-21D117.21
whole body, neonate N10.CNhs10518.761-6B423.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:5816371..5816454,-&oldid=866841"