FFCP PHASE1:Hg19::chr12:49582837..49582875,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:49582837..49582875,- to FFCP PHASE1:Hg19::chr12:49582837..49582875,-: NSchange) |
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{{FFCP | {{FFCP | ||
|EntrezGene=7846 | |EntrezGene=7846 | ||
|HGNC=20766 | |HGNC=20766 | ||
|UniProt=F8W0F6,F8VQQ4,F8VYI2,F8VXZ4,F8VXB8,F8VWX4,F8VRZ4,Q71U36 | |UniProt=F8W0F6,F8VQQ4,F8VYI2,F8VXZ4,F8VXB8,F8VWX4,F8VRZ4,Q71U36 | ||
|association_with_transcript=0bp_to_ENST00000546918,ENST00000547939,ENST00000548302,ENST00000548405,ENST00000552250,ENST00000552597,ENST00000552924,NM_006009,uc001rtp.2,uc001rtq.2,uc001rtr.2,uc009zlg.2_5end | |||
|description=CAGE_peak_1_at_TUBA1A_5end | |||
|id=chr12:49582837..49582875,- | |||
|ontology_enrichment_celltype=CL:0000055!1.42e-24!180;CL:0000183!1.36e-17!59;CL:0000222!1.69e-17!119;CL:0000393!2.58e-16!60;CL:0000211!2.58e-16!60;CL:0000192!5.27e-16!42;CL:0000514!5.27e-16!42;CL:0000680!5.71e-16!57;CL:0000056!5.71e-16!57;CL:0000355!5.71e-16!57;CL:0000187!1.30e-15!54;CL:0000359!1.52e-12!32;CL:0000220!4.32e-09!246;CL:0002321!6.05e-09!248;CL:0000057!1.59e-07!75;CL:0002139!1.73e-07!24;CL:0000115!2.26e-07!35;CL:0000133!5.07e-07!59;CL:0002371!5.96e-07!591 | |||
|phase1_expression=1541.3593697314,598.410964275298,838.819658775124,578.423664481094,271.305384317364,328.871623585839,554.7267331886,804.811118745783,123.279616510324,1722.59489487558,1668.44259262207,808.233076881637,1027.63614717806,669.328436807932,255.175979310495,1165.13947880093,1315.68215467634,1369.33141947632,1322.29788472227,4011.77655637406,2201.57545990798,3647.67259384051,3963.79594979087,2365.73756295973,2509.97399341889,9.85732934148571,9.19526601839392,10.7833770399741,969.249578155699,386.132374485796,712.92824787053,93.7809648968506,241.567146860157,20.3364705591733,240.768059403577,216.66591031083,351.146125444477,264.809805278237,219.997258874745,255.855816573989,143.753734462031,100.407036465884,91.6969020777704,84.4763767309271,134.901711896905,106.251818800263,80.6528758062726,155.832629560272,165.383202057985,171.464665824002,526.410251917302,476.275210995611,315.442297874006,372.444662427868,434.719021967837,68.7084539330507,118.168362975047,121.800128569236,86.0095737562236,191.273700137352,179.653732349531,111.48973946311,459.963194475483,279.603436349447,55.139755339431,158.300477688828,90.3092261043584,307.528366274254,585.625317385886,674.805740498797,469.790014043494,288.729666614251,175.32016264225,668.411725890984,705.421067284014,537.774425728984,535.470584675342,594.850672545207,378.990933431715,691.72592906001,696.805120228413,653.937670477389,110.877634010633,133.25782114796,122.752277033171,136.980401443849,104.102956629363,116.099992870806,146.751961758239,139.291848162163,532.214126117334,298.903729389808,352.455916331461,405.765978737609,265.120550290267,185.685779766429,539.181479882016,510.127970048416,386.325216620078,87.6057235847153,312.559453701613,274.126279520411,325.360636441212,139.040250192697,282.527065268369,249.890233090325,277.573960359141,105.931521413133,92.3421367675136,85.5077103939116,80.9705552112536,129.252176237833,431.958758491082,302.053594913286,315.69728189103,107.757184905385,447.218316033442,406.167640560469,352.962470367206,104.808021312628,115.241771332586,95.9956564892858,102.692231211041,81.5274713053645,141.171721004151,149.169668787731,94.4297196459204,412.084183151353,296.323736928126,443.45232468913,63.38978524163,638.507218437862,920.994032958949,495.894517071625,756.518907149557,332.27791449613,369.01267943171,144.530556479883,1700.1141518786,1465.63131722755,1285.90126254737,588.881923437716,57.9229508385142,27.0672643232633,1118.06577114038,1205.50017132283,1593.76707273964,38.6354811374654,40.039643754609,30.4595151090243,1684.71016484019,1412.50520516426,1951.6239000379,1141.35673474458,1478.73551263992,1190.71088551661,1301.82964655779,916.087411255271,974.088027236213,1232.77601681228,3957.79804059737,1861.14611479892,3365.61577358926,1152.25609380395,2674.27856995769,449.534832182058,203.648140971936,249.434429270559,1876.59564258241,2146.28965628354,1505.18552813223,996.259955816638,1078.02913433234,107.715230879206,406.026084535075,1092.94794617699,1076.35423083066,737.4569519452,782.398451129576,879.70315462328,1845.6901361666,1600.62572167895,487.667692471434,412.484077877385,737.703568751039,756.030351086432,368.752591667199,182.770716830361,553.147656143328,953.258413800775,626.937214914806,552.999054113489,480.600771828983,671.916659263557,495.073865293116,1150.46621594202,93.819809307595,936.146251538258,748.476994926192,1602.79415837286,737.302213503461,1544.3155094146,1033.85432970204,775.502459240228,1040.37696148759,864.602071949034,413.905852287674,1588.16399642345,898.56268516551,806.819814956548,805.341224406335,1053.61983835234,863.580195018118,807.445452503002,742.420139906712,917.468142063523,1072.00193078351,1237.68279511889,888.281521898189,412.359090944789,1389.15253551751,1223.53348087646,1117.06518214149,630.030381312348,690.047685094812,394.929927850658,286.882156816808,315.288318836813,628.376843038355,1078.3859553249,491.016375803973,398.920253469882,736.877297273433,611.078891283241,1273.60397486987,908.303667230551,593.384933932399,8.75470320294845,9.6093273344518,6.50729780685401,9.59557562771827,10.8939722046203,5.21995362044413,10.7865046528132,8.24130153526453,9.23393176671337,749.965941898643,2116.248366694,2837.39123411867,3023.9691932006,0,10.8110993834539,209.730416871898,233.975442689765,37.2654968785634,1666.09500580898,1762.69933394794,31.4724909121335,89.7723723635863,43.3313923341918,89.9230922656496,969.219219880567,2072.59807148292,2593.94281131734,1420.99742633615,1341.30866614814,961.620909621621,812.765738346204,210.194369857167,254.111903980082,1041.99036976187,682.824445676296,847.048993883462,1121.05665448185,1263.05762192722,651.456571828766,100.842896563407,131.075906269797,462.359511073245,483.795299613816,202.071156060354,4120.4389682573,1510.66535171659,2395.70265913241,1179.98136963138,939.309538447805,842.793445440238,1493.46245377822,729.149750759267,626.815961720256,414.448327314338,1481.36375528656,891.974300832891,1394.23415174208,994.875124471858,196.711045218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| ||
|short_description=p1@TUBA1A | |||
}} | }} |
Revision as of 09:46, 18 April 2012
Short description: | p1@TUBA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TUBA1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546918, ENST00000547939, ENST00000548302, ENST00000548405, ENST00000552250, ENST00000552597, ENST00000552924, NM_006009, uc001rtp.2, uc001rtq.2, uc001rtr.2, uc009zlg.2_5end |
EntrezGene: | TUBA1A |
HGNC: | 20766 |
UniProt: | F8W0F6F8VQQ4F8VYI2F8VXZ4F8VXB8F8VWX4F8VRZ4Q71U36 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Ontology term | p-value | n |
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Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.