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FFCP PHASE1:Mm9::chr1:33776748..33776790,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:33776748..33776790,+
|short_description=p1@Rab23
|description=CAGE_peak_1_at_Rab23_5end
|association_with_transcript=0bp_to_ENSMUST00000135330,ENSMUST00000138024_5end
|EntrezGene=19335
|EntrezGene=19335
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000135330,ENSMUST00000138024_5end
|description=CAGE_peak_1_at_Rab23_5end
|id=chr1:33776748..33776790,+
|ontology_enrichment_disease=
|phase1_expression=7.36684696682052,1.39590163055744,0.454999239389536,1.51232105653415,0.500895729946347,2.18243053485457,2.10251376535973,3.87369970324729,2.111830832275,2.10658073689794,1.36974374580404,2.79202556483677,2.39681021903688,2.09808965805594,1.66554880907831,1.82227740650843,2.79824751251259,2.99689057090326,2.87940310572051,1.69755860719212,5.95303031057488,1.09220046320974,3.13439746966722,0.799962113967033,0.45881856213434,0,0.86152399231815,1.29282739611533,0.190023419456374,1.26015064879965,0.886922042621219,2.54012269383853,6.1506478758457,0,2.02196133825892,1.99481574430191,1.42918549383658,13.393012183581,10.1573594788094,8.37637990358077,9.99993529652724,12.294818729252,11.6522484727477,13.7227531593379,12.9762471960979,10.8292583775392,1.56478268869608,6.32272953503295,6.81027166476863,7.19390626574849,7.8392396110203,5.75010257459886,2.01339127269284,2.90144856804538,0.336093799142464,6.94600477297057,6.87680255853016,3.6097046459421,8.09265843438391,8.99284664762456,10.775133859605,6.43804610931351,3.55717918444456,1.3498495759221,1.97773272513395,2.1314403448383,3.29560121570245,3.45796474789399,10.8874092923902,9.18040380655497,11.9885227970288,6.28432165688368,6.40518768759679,8.94182834269164,10.2554653989513,6.43453150627015,5.50579404996943,6.76742891851495,6.45147439676223,8.44072241473241,8.87430142943374,10.939180781692,4.74611098302348,5.6276261003168,5.34793867218835,6.18720029494702,8.68467252874528,7.45597783301202,6.96680978665293,5.89458168832927,6.95674772884027,2.58127163094416,2.719885334831,2.15881276655127,1.29955283489534,0.448026887097336,3.5111105032938,18.9177658061644,18.7045923314066,15.546941278455,6.05626705039726,12.8326477414318,12.7402619853323,35.5533351576666,3.68034769719064,3.54703811665138,5.05524445014783,2.2836775943812,3.36619248741323,2.52351636410202,6.93941307064543,3.95805121805784,4.38169444786511,6.0289056221049,4.46837087115678,3.01599819191221,5.43828929015623,5.06097749219691,1.76922110389975,10.0295446967394,3.75430581382669,6.78825354389311,3.72783522436244,7.61230072230023,5.86450779077674,2.04365644166873,0.718890747035522,0.599902730993408,1.27070227073065,8.23848516726525,2.74500361691176,6.91098936620754,5.9100268865374,6.64860189058859,6.85700547046548,6.32740925964255,6.82323737797119,6.22034853050465,0.758168275301024,4.8401626853889,10.7999967659044,9.19608417733892,9.72335500948886,9.19299388797862,7.75616090325138,8.45550553880009,8.90166383317424,6.46758426847539,11.2095356325078,13.2374256117473,8.79755620819744,9.20622076195814,11.1218899690239,10.7958171621872,12.3469281844766,10.1507476077432,0.702213187313235,0.772043721344145,0,5.17814431338755,6.3322036194896,7.92273070428465,4.26140524053378,4.72234156193769,3.5481435964097,3.25547522650571,6.9751084363901,4.78737903705395,5.43047504714485,7.71587081171748,7.1340552400353,7.45619935869195,7.68425403518677,6.03928884421673,6.09840850835969,9.77593817603202,0.330418782983798,2.90895623329899,10.6644125267617,9.52170354627798,7.60318021800351,6.45387278794696,3.55804870151792,3.80451252225118,4.2707615539006,5.10566759644434,6.78605063760728,3.97912944082302,7.79856348476481,0.898819408654221,3.8904848977445,3.18626037206988,6.2590407314517,8.22589290790047,7.88954149711563,6.10953983535943,8.72786192254316,6.0316805105674,5.81776141543167,3.09981310757165,4.39596437955849,3.57851775373222,3.26097889795864,3.50374722003798,4.32429789249047,3.59779379815766,3.65148218499305,2.894125917029,2.5462585178142,3.74004978686054,1.62135226775035,2.19649130550465,5.75072826109418,2.97712758134803,3.43241440426017,3.53610429125956,2.51156378930677,1.4473305640901,5.17308932466493,7.76914788258988,6.19266910479698,5.94107800213158,6.80601720036656,6.53274404023081,5.47500374037832,7.41507861859636,9.93101407869003,7.30833475840957,10.3645599627367,5.40748938561935,5.87128938344045,6.36455857758651,0,1.63171705145613,1.47529281905711,2.20749397043786,6.90367536947505,6.21221938938677,25.0820466426313,4.29200576247434,6.94118082715765,7.41833614163613,6.89354872744957,7.40803273652911,8.91194696329577,7.35998980050964,10.1202675418724,11.3979784585412,5.92931666919785,7.06906896127976,6.38730383437209,7.47875535402472,7.81857404897165,9.23832688646199,2.65490276679926,5.82673526771955,6.34879469625977,4.90373207365335,5.31543407185391,5.84126781093462,5.68542244970086,7.27067458955011,6.06045543254026,5.68866164284469,8.4334886859999,2.06271086496374,5.44703369206061,13.1444598642856,8.14959707831353,9.64516657642165,7.62563004661776,9.27517851530767,8.55654907131029,4.87143918583359,4.22409074514679,6.99045833850607,2.42581237860458,8.73897140589844,4.03661066739764,9.83100676328941,6.32673423216623,10.0125948844487,1.7488850197791,5.37733375830478,1.87957968877638,5.77883230297023,4.8150577116125,2.26042148405629,4.64760374251486,2.97411625168479,1.18984900995699,1.25956307091292,0.829199842826543,6.68269432610579,9.01557581706236,8.74273708645449,9.18045396985311,10.454414800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|phase1_expression=7.36684696682052,1.39590163055744,0.454999239389536,1.51232105653415,0.500895729946347,2.18243053485457,2.10251376535973,3.87369970324729,2.111830832275,2.10658073689794,1.36974374580404,2.79202556483677,2.39681021903688,2.09808965805594,1.66554880907831,1.82227740650843,2.79824751251259,2.99689057090326,2.87940310572051,1.69755860719212,5.95303031057488,1.09220046320974,3.13439746966722,0.799962113967033,0.45881856213434,0,0.86152399231815,1.29282739611533,0.190023419456374,1.26015064879965,0.886922042621219,2.54012269383853,6.1506478758457,0,2.02196133825892,1.99481574430191,1.42918549383658,13.393012183581,10.1573594788094,8.37637990358077,9.99993529652724,12.294818729252,11.6522484727477,13.7227531593379,12.9762471960979,10.8292583775392,1.56478268869608,6.32272953503295,6.81027166476863,7.19390626574849,7.8392396110203,5.75010257459886,2.01339127269284,2.90144856804538,0.336093799142464,6.94600477297057,6.87680255853016,3.6097046459421,8.09265843438391,8.99284664762456,10.775133859605,6.43804610931351,3.55717918444456,1.3498495759221,1.97773272513395,2.1314403448383,3.29560121570245,3.45796474789399,10.8874092923902,9.18040380655497,11.9885227970288,6.28432165688368,6.40518768759679,8.94182834269164,10.2554653989513,6.43453150627015,5.50579404996943,6.76742891851495,6.45147439676223,8.44072241473241,8.87430142943374,10.939180781692,4.74611098302348,5.6276261003168,5.34793867218835,6.18720029494702,8.68467252874528,7.45597783301202,6.96680978665293,5.89458168832927,6.95674772884027,2.58127163094416,2.719885334831,2.15881276655127,1.29955283489534,0.448026887097336,3.5111105032938,18.9177658061644,18.7045923314066,15.546941278455,6.05626705039726,12.8326477414318,12.7402619853323,35.5533351576666,3.68034769719064,3.54703811665138,5.05524445014783,2.2836775943812,3.36619248741323,2.52351636410202,6.93941307064543,3.95805121805784,4.38169444786511,6.0289056221049,4.46837087115678,3.01599819191221,5.43828929015623,5.06097749219691,1.76922110389975,10.0295446967394,3.75430581382669,6.78825354389311,3.72783522436244,7.61230072230023,5.86450779077674,2.04365644166873,0.718890747035522,0.599902730993408,1.27070227073065,8.23848516726525,2.74500361691176,6.91098936620754,5.9100268865374,6.64860189058859,6.85700547046548,6.32740925964255,6.82323737797119,6.22034853050465,0.758168275301024,4.8401626853889,10.7999967659044,9.19608417733892,9.72335500948886,9.19299388797862,7.75616090325138,8.45550553880009,8.90166383317424,6.46758426847539,11.2095356325078,13.2374256117473,8.79755620819744,9.20622076195814,11.1218899690239,10.7958171621872,12.3469281844766,10.1507476077432,0.702213187313235,0.772043721344145,0,5.17814431338755,6.3322036194896,7.92273070428465,4.26140524053378,4.72234156193769,3.5481435964097,3.25547522650571,6.9751084363901,4.78737903705395,5.43047504714485,7.71587081171748,7.1340552400353,7.45619935869195,7.68425403518677,6.03928884421673,6.09840850835969,9.77593817603202,0.330418782983798,2.90895623329899,10.6644125267617,9.52170354627798,7.60318021800351,6.45387278794696,3.55804870151792,3.80451252225118,4.2707615539006,5.10566759644434,6.78605063760728,3.97912944082302,7.79856348476481,0.898819408654221,3.8904848977445,3.18626037206988,6.2590407314517,8.22589290790047,7.88954149711563,6.10953983535943,8.72786192254316,6.0316805105674,5.81776141543167,3.09981310757165,4.39596437955849,3.57851775373222,3.26097889795864,3.50374722003798,4.32429789249047,3.59779379815766,3.65148218499305,2.894125917029,2.5462585178142,3.74004978686054,1.62135226775035,2.19649130550465,5.75072826109418,2.97712758134803,3.43241440426017,3.53610429125956,2.51156378930677,1.4473305640901,5.17308932466493,7.76914788258988,6.19266910479698,5.94107800213158,6.80601720036656,6.53274404023081,5.47500374037832,7.41507861859636,9.93101407869003,7.30833475840957,10.3645599627367,5.40748938561935,5.87128938344045,6.36455857758651,0,1.63171705145613,1.47529281905711,2.20749397043786,6.90367536947505,6.21221938938677,25.0820466426313,4.29200576247434,6.94118082715765,7.41833614163613,6.89354872744957,7.40803273652911,8.91194696329577,7.35998980050964,10.1202675418724,11.3979784585412,5.92931666919785,7.06906896127976,6.38730383437209,7.47875535402472,7.81857404897165,9.23832688646199,2.65490276679926,5.82673526771955,6.34879469625977,4.90373207365335,5.31543407185391,5.84126781093462,5.68542244970086,7.27067458955011,6.06045543254026,5.68866164284469,8.4334886859999,2.06271086496374,5.44703369206061,13.1444598642856,8.14959707831353,9.64516657642165,7.62563004661776,9.27517851530767,8.55654907131029,4.87143918583359,4.22409074514679,6.99045833850607,2.42581237860458,8.73897140589844,4.03661066739764,9.83100676328941,6.32673423216623,10.0125948844487,1.7488850197791,5.37733375830478,1.87957968877638,5.77883230297023,4.8150577116125,2.26042148405629,4.64760374251486,2.97411625168479,1.18984900995699,1.25956307091292,0.829199842826543,6.68269432610579,9.01557581706236,8.74273708645449,9.18045396985311,10.454414800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|short_description=p1@Rab23
}}
}}

Revision as of 07:03, 18 April 2012

Short description:p1@Rab23
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab23_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000135330, ENSMUST00000138024_5end
EntrezGene:Rab23
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab23

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.79
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.98
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.83
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.32
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D96.97
Mouse Schwann, donor2.CNhs12573.11746-123F95.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I718.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E318.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C14.47
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F510.03
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A48.24
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F26.86
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C610.80
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C99.72
eyeball, embryo E17.CNhs11023.1261-18D49.19
eyeball, neonate N00.CNhs11207.633-15C67.76
eyeball, neonate N01.CNhs11140.1532-43E78.46
eyeball, neonate N02.CNhs11205.1551-44G88.90
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E211.21
forelimb, embryo E12.CNhs10600.359-14H213.24
forelimb, embryo E13.CNhs10589.384-1E28.80
forelimb, embryo E14.CNhs10577.413-26A89.21
forelimb, embryo E15.CNhs11007.437-20E711.12
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B512.35
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G36.98
heart, neonate N00.CNhs11213.639-21E34.79
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G17.72
heart, neonate N16.CNhs11209.782-15G17.13
heart, neonate N20.CNhs11127.821-26I67.46
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D26.04
hippocampus, adult.CNhs10478.13-16E86.10
hippocampus, neonate N00.CNhs11228.627-43G19.78
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I510.66
intestine, embryo E13.CNhs11010.381-16D59.52
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A57.80
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F88.23
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C78.73
kidney, neonate N00.CNhs11214.646-21G76.03
kidney, neonate N10.CNhs11206.758-6D55.82
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F34.40
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A33.54
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G27.77
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B66.81
lung, embryo E17.CNhs10605.480-44A66.53
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C67.42
lung, neonate N06.CNhs11212.683-20E59.93
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E610.36
lung, neonate N20.CNhs11109.822-18A45.41
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H26.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C725.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I47.82
oviduct, adult pregnant day01.CNhs10500.988-6G69.24
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E613.14
pituitary gland, embryo E13.CNhs11009.370-44C78.15
pituitary gland, embryo E14.CNhs11037.398-44A59.65
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F69.28
pituitary gland, embryo E17.CNhs11039.1265-44F58.56
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H39.83
skin, neonate N06.CNhs11097.693-20I56.33
skin, neonate N10.CNhs11108.762-6C410.01
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H14.65
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.83
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E39.02
stomach, embryo E15.CNhs10603.1252-16G88.74
stomach, embryo E16.CNhs11022.459-17D49.18
stomach, embryo E17.CNhs11006.1035-18D510.45
stomach, embryo E18.CNhs10999.1286-20C67.64
stomach, neonate N03.CNhs11193.1340-24B815.78
stomach, neonate N07.CNhs11210.718-18A914.30
stomach, neonate N25.CNhs11104.1355-25E414.13
stomach, neonate N30.CNhs11134.1386-42I16.35
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F510.17
testis, embryo E15.CNhs11034.443-27C510.92
testis, embryo E16.CNhs11033.470-26G58.75
testis, embryo E17.CNhs11029.486-18I59.56
testis, embryo E18.CNhs11027.503-18G58.62
testis, neonate N00.CNhs11189.1300-22B79.04
testis, neonate N07.CNhs11222.726-26I49.90
testis, neonate N10.CNhs11204.763-44D99.86
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G22.57
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.46
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.74
urinary bladder, adult.CNhs10481.879-12E46.76
uterus, adult pregnant day19.CNhs10497.590-15F59.38
uterus, adult.CNhs10509.92-27E57.33
vagina, adult.CNhs10502.89-27D57.93
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I812.66
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B110.48
whole body, embryo E16.CNhs10514.453-14F29.56
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.38
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.30
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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