Personal tools

FFCP PHASE1:Mm9::chr19:4756557..4756623,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:4756557..4756623,+
|short_description=p1@Rbm4b
|description=CAGE_peak_1_at_Rbm4b_5end
|association_with_transcript=32bp_to_,-32bp_to_ENSMUST00000036744,ENSMUST00000164376,NM_025717,uc008gaq.1,uc008gar.1,uc008gas.1,uc012bgk.1_5end
|EntrezGene=66704
|EntrezGene=66704
|HGNC=
|HGNC=
|UniProt=Q8VE92,F6TBN8,Q3TY21
|UniProt=Q8VE92,F6TBN8,Q3TY21
|association_with_transcript=32bp_to_,-32bp_to_ENSMUST00000036744,ENSMUST00000164376,NM_025717,uc008gaq.1,uc008gar.1,uc008gas.1,uc012bgk.1_5end
|description=CAGE_peak_1_at_Rbm4b_5end
|id=chr19:4756557..4756623,+
|ontology_enrichment_disease=
|phase1_expression=15.3742893220602,3.48975407639361,4.54999239389536,5.74682001482977,5.50985302940982,5.03637815735669,4.20502753071946,17.4316486646128,38.01295498095,34.641549895655,10.2730780935303,9.6524312384357,12.6688540149092,14.4243663991346,3.66420737997229,3.64455481301687,1.39912375625629,9.14840279538889,11.9289557236993,10.6097412949508,22.7065584703356,10.7234227296956,9.92559198727954,3.67982572424835,3.89995777814189,4.01962374880514,5.1691439539089,4.52489588640367,3.80046838912748,3.2763916868791,3.76941868114018,3.17515336729816,3.07532393792285,0,3.75507105676657,4.65457007003779,4.28755648150975,2.09265815368454,6.2506827561904,3.14114246384279,2.94115744015507,4.09827290975067,2.42755176515577,7.67970589651021,8.71841608487825,8.62669735159903,10.9534788208725,5.88667922227206,10.7646229539891,8.36048566019419,8.67915814077248,8.62515386189829,16.6104779997159,23.211588544363,20.1656279485478,3.60163210450326,4.58453503902011,5.67239301505187,56.0416596581086,41.2612963832186,51.9741750875067,9.14880236586657,3.55717918444456,4.04954872776629,2.96659908770092,3.5524005747305,5.39280198933128,9.22123932771731,45.6234294157302,53.5973575176812,48.7953910335206,19.7099179238624,20.5407743085001,47.4039392961872,42.4595436610787,57.9107835564313,17.6185409599022,19.1531007127782,16.1286859919056,52.8864013798077,51.5075433481566,60.4259509845842,21.217907924105,20.2594539611405,16.8078072554491,17.6777151284201,23.6336990126511,45.8542636730239,4.08921443999194,5.2144376473682,11.3047150593654,9.46466264679525,5.439770669662,5.93673510801599,12.3457519315057,7.6164570806547,8.14577636764161,8.18065548374677,11.1707981979234,8.83348936275851,16.4786801138716,10.2661181931454,7.64415719119937,0,5.41227602528035,4.56047757855178,5.56076889516262,10.0481814152773,7.50919862576798,6.67989625791711,9.1947223186052,8.8294988710521,5.76538743140146,6.48107354376277,9.28950786372068,9.17366116706631,7.16865406429684,5.92857363371638,6.19227386364912,4.36770494858005,5.52103796150984,4.84875253135222,7.45567044872489,11.7112318804619,9.42510180660548,2.81002760729451,4.55297473122497,6.59893004092748,5.33694953706872,19.0234112044125,10.5225138648284,32.7957859014576,8.34356736922927,5.62574006126727,16.8308316093244,10.707923362472,10.3876151127323,4.85187185379363,6.82351447770922,3.99839526184301,18.6072233436666,20.2313851901456,18.546399369951,17.0296444154358,16.4648327946213,18.1921482804487,15.554486276915,12.6764651662118,19.185551371023,21.1798809787958,16.7153567955751,11.3981780862339,13.9023624612799,8.358051996532,6.79081050146213,17.7140497468459,2.80885274925294,1.02939162845886,5.96743348730745,8.69928244649108,10.3191466391682,9.7233513188948,6.8655973319711,10.4285042826124,6.47921874126989,7.44108623201305,5.90201483079162,6.07179780309281,6.91151369636618,5.41752631461014,4.53985333456792,6.43279944671462,3.73235195994786,5.09984391289413,10.5144974282064,24.6971069710283,1.32167513193519,3.70230793328962,21.1155368029882,18.8111704206955,9.27845721519072,5.84882221407693,5.55945109612176,4.56541502670142,2.84717436926707,4.28217282282428,7.28872105520782,4.17808591286417,6.62877896205008,1.79763881730844,2.80979464837102,1.99141273254367,12.5180814629034,11.0821057231437,12.3978509240388,11.4044743593376,11.8311017172252,8.6968416663995,8.22074982615345,5.60918562322488,7.37894020854462,7.52722699922983,6.81841042300442,4.83850806576673,3.73462090715086,4.04751802292737,5.88294352026658,5.30589751455317,8.40265310878685,8.91858026097513,7.7824908852017,5.21666685057355,10.0637744569148,7.07067800570156,8.11297950097858,8.84026072814891,5.02312757861354,16.8855232477179,6.65111484599777,15.9172785887207,11.2445833744998,12.3913912615887,10.3263709246941,6.365237782789,6.9032655856944,7.21994497073856,5.35959489961049,7.52979944805835,8.29164797018933,3.93271955317771,5.00786447411097,4.05017364028232,0,1.08781136763742,2.45882136509518,4.13905119457099,17.6605648986571,11.9555920324047,10.0000316679772,3.02965112645248,11.6738041184015,11.7131623288992,16.5876016254255,11.4705023017225,12.6995244226965,11.3230612315533,14.5731852602962,12.8592577480977,12.2539211163422,15.1021018718249,6.95506417520516,12.1084610493734,9.12166972380026,11.0529982391599,2.65490276679926,9.71122544619926,6.65111825322452,6.97838795096823,4.13422650033082,6.7635732547664,6.46070732920553,6.18007340111759,4.63446591900138,5.37262488490887,2.10837217149998,4.12542172992747,9.19186935535228,19.8067203434441,19.4038025674132,25.2917701337279,16.1379612614469,12.664186049747,10.3665882979336,12.178597964584,2.3467170806371,4.2366414172764,4.41056796109924,2.80306630000516,3.55221738730992,4.58378229453985,5.49112782414428,3.44695889464629,0.874442509889552,14.2777482548092,4.44264290074417,9.70018279427146,5.18544676635193,4.70921142511728,5.33107488111998,5.0331198105435,10.1987057996313,10.636310376598,8.153798454461,3.81868247206045,16.1331356726379,9.96265388921559,8.8564379473877,6.89991376847747,8.51613998610093,6.47348862647139,5.37247462214684,4.97336289769656,2.20345454596048,4.34937519160848,122.321367694469,13.0079395058262,13.4021377270249,15.3616438791798,12.6576627008176,9.96841140395591,8.9191501370773,11.8485990207995,12.687980675511,31.1643515865548,67.9750814768562,6.00421129193539,6.68993210457542,9.44940805916411,8.83461596249006,7.87717460936918,7.54989148168807,6.73094517311826,7.08909730437971,7.37055084621478,6.62999217898499,7.56196388526304,9.35595655101623,7.79315917286669,6.66198342434943,2.72076460338254,2.66383144048878,3.76798197759798,1.51096154727671,5.9888774149979,3.19060208267009,6.77661009788881,5.14484109789758,4.51414893631827,8.471277639256,12.889106622201,14.8952833494243,10.998603669996,10.9613203163303,9.82012066606611,8.77529250301348,12.6089936902782,10.4222754066367,11.9084871702919,21.6915556450929,26.3356416444681,17.75629499843,10.9398022680732,12.5767897576789,11.2144540154509,7.11189528965169,9.06554251851134,11.2321723357135,4.04315538822076,10.6461305953901,8.67681170375951,9.08322622457859,7.55496798377458,7.92609471587463,10.9547548995107,10.0819363572024,6.17309505483856,8.24171801606613,6.77115032618228,7.20025430009372,7.27650805253284,9.29901140794552,9.01147783120437,8.75217237862575,9.22299226019274,9.87811053512972,11.0489278803894,9.77789619690205,9.53941861818155,8.30445126869219,10.9339975436875,4.09231043169689,8.2116525828562,5.20847849649082,12.9901500527732,9.35726433781634,7.09074478359384,3.63447830930802,5.7353768971074,1.62307484934295
|phase1_expression=15.3742893220602,3.48975407639361,4.54999239389536,5.74682001482977,5.50985302940982,5.03637815735669,4.20502753071946,17.4316486646128,38.01295498095,34.641549895655,10.2730780935303,9.6524312384357,12.6688540149092,14.4243663991346,3.66420737997229,3.64455481301687,1.39912375625629,9.14840279538889,11.9289557236993,10.6097412949508,22.7065584703356,10.7234227296956,9.92559198727954,3.67982572424835,3.89995777814189,4.01962374880514,5.1691439539089,4.52489588640367,3.80046838912748,3.2763916868791,3.76941868114018,3.17515336729816,3.07532393792285,0,3.75507105676657,4.65457007003779,4.28755648150975,2.09265815368454,6.2506827561904,3.14114246384279,2.94115744015507,4.09827290975067,2.42755176515577,7.67970589651021,8.71841608487825,8.62669735159903,10.9534788208725,5.88667922227206,10.7646229539891,8.36048566019419,8.67915814077248,8.62515386189829,16.6104779997159,23.211588544363,20.1656279485478,3.60163210450326,4.58453503902011,5.67239301505187,56.0416596581086,41.2612963832186,51.9741750875067,9.14880236586657,3.55717918444456,4.04954872776629,2.96659908770092,3.5524005747305,5.39280198933128,9.22123932771731,45.6234294157302,53.5973575176812,48.7953910335206,19.7099179238624,20.5407743085001,47.4039392961872,42.4595436610787,57.9107835564313,17.6185409599022,19.1531007127782,16.1286859919056,52.8864013798077,51.5075433481566,60.4259509845842,21.217907924105,20.2594539611405,16.8078072554491,17.6777151284201,23.6336990126511,45.8542636730239,4.08921443999194,5.2144376473682,11.3047150593654,9.46466264679525,5.439770669662,5.93673510801599,12.3457519315057,7.6164570806547,8.14577636764161,8.18065548374677,11.1707981979234,8.83348936275851,16.4786801138716,10.2661181931454,7.64415719119937,0,5.41227602528035,4.56047757855178,5.56076889516262,10.0481814152773,7.50919862576798,6.67989625791711,9.1947223186052,8.8294988710521,5.76538743140146,6.48107354376277,9.28950786372068,9.17366116706631,7.16865406429684,5.92857363371638,6.19227386364912,4.36770494858005,5.52103796150984,4.84875253135222,7.45567044872489,11.7112318804619,9.42510180660548,2.81002760729451,4.55297473122497,6.59893004092748,5.33694953706872,19.0234112044125,10.5225138648284,32.7957859014576,8.34356736922927,5.62574006126727,16.8308316093244,10.707923362472,10.3876151127323,4.85187185379363,6.82351447770922,3.99839526184301,18.6072233436666,20.2313851901456,18.546399369951,17.0296444154358,16.4648327946213,18.1921482804487,15.554486276915,12.6764651662118,19.185551371023,21.1798809787958,16.7153567955751,11.3981780862339,13.9023624612799,8.358051996532,6.79081050146213,17.7140497468459,2.80885274925294,1.02939162845886,5.96743348730745,8.69928244649108,10.3191466391682,9.7233513188948,6.8655973319711,10.4285042826124,6.47921874126989,7.44108623201305,5.90201483079162,6.07179780309281,6.91151369636618,5.41752631461014,4.53985333456792,6.43279944671462,3.73235195994786,5.09984391289413,10.5144974282064,24.6971069710283,1.32167513193519,3.70230793328962,21.1155368029882,18.8111704206955,9.27845721519072,5.84882221407693,5.55945109612176,4.56541502670142,2.84717436926707,4.28217282282428,7.28872105520782,4.17808591286417,6.62877896205008,1.79763881730844,2.80979464837102,1.99141273254367,12.5180814629034,11.0821057231437,12.3978509240388,11.4044743593376,11.8311017172252,8.6968416663995,8.22074982615345,5.60918562322488,7.37894020854462,7.52722699922983,6.81841042300442,4.83850806576673,3.73462090715086,4.04751802292737,5.88294352026658,5.30589751455317,8.40265310878685,8.91858026097513,7.7824908852017,5.21666685057355,10.0637744569148,7.07067800570156,8.11297950097858,8.84026072814891,5.02312757861354,16.8855232477179,6.65111484599777,15.9172785887207,11.2445833744998,12.3913912615887,10.3263709246941,6.365237782789,6.9032655856944,7.21994497073856,5.35959489961049,7.52979944805835,8.29164797018933,3.93271955317771,5.00786447411097,4.05017364028232,0,1.08781136763742,2.45882136509518,4.13905119457099,17.6605648986571,11.9555920324047,10.0000316679772,3.02965112645248,11.6738041184015,11.7131623288992,16.5876016254255,11.4705023017225,12.6995244226965,11.3230612315533,14.5731852602962,12.8592577480977,12.2539211163422,15.1021018718249,6.95506417520516,12.1084610493734,9.12166972380026,11.0529982391599,2.65490276679926,9.71122544619926,6.65111825322452,6.97838795096823,4.13422650033082,6.7635732547664,6.46070732920553,6.18007340111759,4.63446591900138,5.37262488490887,2.10837217149998,4.12542172992747,9.19186935535228,19.8067203434441,19.4038025674132,25.2917701337279,16.1379612614469,12.664186049747,10.3665882979336,12.178597964584,2.3467170806371,4.2366414172764,4.41056796109924,2.80306630000516,3.55221738730992,4.58378229453985,5.49112782414428,3.44695889464629,0.874442509889552,14.2777482548092,4.44264290074417,9.70018279427146,5.18544676635193,4.70921142511728,5.33107488111998,5.0331198105435,10.1987057996313,10.636310376598,8.153798454461,3.81868247206045,16.1331356726379,9.96265388921559,8.8564379473877,6.89991376847747,8.51613998610093,6.47348862647139,5.37247462214684,4.97336289769656,2.20345454596048,4.34937519160848,122.321367694469,13.0079395058262,13.4021377270249,15.3616438791798,12.6576627008176,9.96841140395591,8.9191501370773,11.8485990207995,12.687980675511,31.1643515865548,67.9750814768562,6.00421129193539,6.68993210457542,9.44940805916411,8.83461596249006,7.87717460936918,7.54989148168807,6.73094517311826,7.08909730437971,7.37055084621478,6.62999217898499,7.56196388526304,9.35595655101623,7.79315917286669,6.66198342434943,2.72076460338254,2.66383144048878,3.76798197759798,1.51096154727671,5.9888774149979,3.19060208267009,6.77661009788881,5.14484109789758,4.51414893631827,8.471277639256,12.889106622201,14.8952833494243,10.998603669996,10.9613203163303,9.82012066606611,8.77529250301348,12.6089936902782,10.4222754066367,11.9084871702919,21.6915556450929,26.3356416444681,17.75629499843,10.9398022680732,12.5767897576789,11.2144540154509,7.11189528965169,9.06554251851134,11.2321723357135,4.04315538822076,10.6461305953901,8.67681170375951,9.08322622457859,7.55496798377458,7.92609471587463,10.9547548995107,10.0819363572024,6.17309505483856,8.24171801606613,6.77115032618228,7.20025430009372,7.27650805253284,9.29901140794552,9.01147783120437,8.75217237862575,9.22299226019274,9.87811053512972,11.0489278803894,9.77789619690205,9.53941861818155,8.30445126869219,10.9339975436875,4.09231043169689,8.2116525828562,5.20847849649082,12.9901500527732,9.35726433781634,7.09074478359384,3.63447830930802,5.7353768971074,1.62307484934295
|short_description=p1@Rbm4b
}}
}}

Revision as of 04:56, 18 April 2012

Short description:p1@Rbm4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rbm4b_5end
Coexpression cluster:NA
Association with transcript: 32bp_to_, -32bp_to_ENSMUST00000036744, ENSMUST00000164376, NM_025717, uc008gaq.1, uc008gar.1, uc008gas.1, uc012bgk.1_5end
EntrezGene:Rbm4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rbm4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E917.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E738.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F234.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.27
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.65
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.67
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.42
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.93
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.63
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.61
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C356.04
Mouse Granule cells, donor2.CNhs12357.11731-123E341.26
Mouse Granule cells, donor3.CNhs12108.11636-122C751.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.15
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D545.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F553.60
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D948.80
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D247.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F242.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D657.91
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D317.62
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D452.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F451.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D860.43
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.85
Mouse Schwann, donor1.CNhs12507.11728-123D94.09
Mouse Schwann, donor2.CNhs12573.11746-123F95.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.30
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.94
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.05
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D76.68
adrenal gland, embryo E14.CNhs11038.406-44C59.19
adrenal gland, embryo E16.CNhs11004.1254-43D68.83
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F56.48
adrenal gland, neonate N00.CNhs11191.1311-23C19.29
adrenal gland, neonate N25.CNhs11223.1377-27I39.17
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H15.93
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I29.43
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.34
corpora quadrigemina, adult.CNhs10501.16-22A419.02
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F132.80
cortex, adult.CNhs10473.12-14D58.34
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F216.83
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.39
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.85
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C618.61
eyeball, embryo E14.CNhs10521.399-16E220.23
eyeball, embryo E15.CNhs10593.426-16C918.55
eyeball, embryo E17.CNhs11023.1261-18D417.03
eyeball, neonate N00.CNhs11207.633-15C616.46
eyeball, neonate N01.CNhs11140.1532-43E718.19
eyeball, neonate N02.CNhs11205.1551-44G815.55
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E219.19
forelimb, embryo E12.CNhs10600.359-14H221.18
forelimb, embryo E13.CNhs10589.384-1E216.72
forelimb, embryo E14.CNhs10577.413-26A811.40
forelimb, embryo E15.CNhs11007.437-20E713.90
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B56.79
gonad, embryo E13.CNhs11044.1564-45I617.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.97
heart, embryo E11.CNhs10586.331-24E98.70
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D46.87
heart, embryo E15.CNhs11017.431-16C810.43
heart, embryo E16.CNhs11021.457-17C66.48
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I26.91
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G14.54
heart, neonate N20.CNhs11127.821-26I66.43
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D25.10
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G124.70
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I521.12
intestine, embryo E13.CNhs11010.381-16D518.81
intestine, embryo E15.CNhs10602.976-16D89.28
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A56.63
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I912.52
kidney, embryo E15.CNhs10997.434-16F811.08
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I211.40
kidney, embryo E18.CNhs11001.1288-20C711.83
kidney, neonate N00.CNhs11214.646-21G78.70
kidney, neonate N10.CNhs11206.758-6D58.22
kidney, neonate N20.CNhs11113.832-19I15.61
kidney, neonate N25.CNhs11122.1353-25F37.38
kidney, neonate N30.CNhs11203.1385-42H17.53
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D75.88
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G48.92
liver, neonate N00.CNhs11117.641-24F47.78
liver, neonate N03.CNhs11123.1345-25G25.22
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B98.11
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H15.02
liver, neonate N30.CNhs11106.1382-42D116.89
lung, adult.CNhs10474.28-22B16.65
lung, embryo E12.CNhs10522.354-16G215.92
lung, embryo E14.CNhs10604.404-26F811.24
lung, embryo E15.CNhs11020.432-17C512.39
lung, embryo E16.CNhs10998.458-17B610.33
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C67.22
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A37.53
lung, neonate N10.CNhs11219.750-23E68.29
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C217.66
medulla oblongata, neonate N30.CNhs11200.1396-42A311.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.47
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.32
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.86
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I915.10
ovary, adult.CNhs10507.91-2I76.96
ovary, embryo E18.CNhs11040.505-44H712.11
ovary, neonate N00.CNhs11217.1299-22I49.12
oviduct, adult pregnant day01.CNhs10500.988-6G611.05
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F49.71
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E56.98
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G96.46
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E619.81
pituitary gland, embryo E13.CNhs11009.370-44C719.40
pituitary gland, embryo E14.CNhs11037.398-44A525.29
pituitary gland, embryo E15.CNhs10592.427-16B916.14
pituitary gland, embryo E16.CNhs11036.449-43F612.66
pituitary gland, embryo E17.CNhs11039.1265-44F510.37
pituitary gland, neonate N00.CNhs11190.1308-22E912.18
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G34.24
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H34.58
skin, neonate N06.CNhs11097.693-20I55.49
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C914.28
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C19.70
spleen, embryo E18.CNhs11011.1271-21F25.19
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G35.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.15
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E316.13
stomach, embryo E15.CNhs10603.1252-16G89.96
stomach, embryo E16.CNhs11022.459-17D48.86
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C68.52
stomach, neonate N03.CNhs11193.1340-24B86.47
stomach, neonate N07.CNhs11210.718-18A95.37
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G5122.32
testis, embryo E13.CNhs11031.389-23F513.01
testis, embryo E15.CNhs11034.443-27C513.40
testis, embryo E16.CNhs11033.470-26G515.36
testis, embryo E17.CNhs11029.486-18I512.66
testis, embryo E18.CNhs11027.503-18G59.97
testis, neonate N00.CNhs11189.1300-22B78.92
testis, neonate N07.CNhs11222.726-26I411.85
testis, neonate N10.CNhs11204.763-44D912.69
testis, neonate N20.CNhs11110.839-18H331.16
testis, neonate N30.CNhs11130.1391-42E267.98
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I46.69
thymus, embryo E15.CNhs11005.430-45I29.45
thymus, embryo E16.CNhs11002.456-26C58.83
thymus, embryo E17.CNhs10581.478-18C17.88
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F86.73
thymus, neonate N03.CNhs11137.2104-43C77.09
thymus, neonate N06.CNhs11197.681-26C47.37
thymus, neonate N07.CNhs11211.713-19D36.63
thymus, neonate N10.CNhs11194.748-24E47.56
thymus, neonate N20.CNhs11186.820-7A29.36
thymus, neonate N25.CNhs11125.1362-25G77.79
thymus, neonate N30.CNhs11132.1393-42G26.66
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E56.78
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A212.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I821.69
whole body, embryo E12.CNhs10587.857-27C926.34
whole body, embryo E13.CNhs10512.372-23H217.76
whole body, embryo E14.5.CNhs10578.420-27D210.94
whole body, embryo E14.CNhs10519.395-14B112.58
whole body, embryo E16.CNhs10514.453-14F211.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.93
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.01
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.21
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I512.99
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C27.09
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:4756557..4756623,%2B&oldid=825151"