Personal tools

FFCP PHASE1:Mm9::chr19:41338421..41338498,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:41338421..41338498,-
|short_description=p1@Tm9sf3
|description=CAGE_peak_1_at_Tm9sf3_5end
|association_with_transcript=0bp_to_ENSMUST00000025989,ENSMUST00000067800,ENSMUST00000164316,NM_133352,uc008hls.1,uc008hlt.1_5end
|EntrezGene=107358
|EntrezGene=107358
|HGNC=
|HGNC=
|UniProt=Q9ET30,Q8C6F5,Q3UH23,Q571B0
|UniProt=Q9ET30,Q8C6F5,Q3UH23,Q571B0
|association_with_transcript=0bp_to_ENSMUST00000025989,ENSMUST00000067800,ENSMUST00000164316,NM_133352,uc008hls.1,uc008hlt.1_5end
|description=CAGE_peak_1_at_Tm9sf3_5end
|id=chr19:41338421..41338498,-
|ontology_enrichment_disease=
|phase1_expression=83.2774004944929,162.971515367582,176.53970488314,116.751185564436,136.744534275353,206.323625179713,182.21785966451,58.1054955487093,139.099257485847,129.20361852974,101.532255157724,82.4844124011778,61.2898613153717,50.6164130005995,38.6407323706169,30.5737653758637,20.9868563438444,48.2657112998104,56.2169177783529,53.0487064747538,46.4336364224841,51.929167478063,45.7099630993137,145.593104742,153.933627596071,175.140749055081,233.903763914378,168.283032727679,215.866604502441,291.59886013224,240.799334571661,20.3209815507082,15.3766196896143,15.8481681015439,110.341318744987,119.688944658114,116.989041138337,124.303894328862,99.2295887545227,129.310364761528,147.646103495785,135.243006021772,124.776160729006,80.4480666863939,82.2166912190263,109.760957792686,25.0365230191373,39.8986036176217,43.2781779986909,67.6616048778506,40.4560758497298,35.9381410912429,59.3950425444387,69.6347656330891,48.3975070765148,142.521727563915,89.6849667008309,109.838155655095,29.5382032855013,25.3915670050576,27.2547503507657,47.7770790217476,30.2360230677787,33.2962895394118,27.6882581518753,30.5506449426823,22.1704081783619,25.3584081512226,34.73602012334,19.1708432431001,30.4971193959504,33.1355141908412,31.8050698970323,27.0704666265048,31.5331599649998,19.3035945188104,36.3382407297983,64.4821057330198,65.2827766339035,25.0583946687368,35.4972057177349,39.5894161623138,45.7860118362265,45.0210088025344,55.3129656952053,55.3901740690495,51.5385484492753,45.1086658897227,105.410861119792,101.417033663306,91.5971784297302,101.530017483804,53.7177353629123,104.162715986099,128.655730654638,99.0139420485112,69.6604323853489,92.2028045147292,80.7934474314922,97.1683829903436,80.2807492727079,89.8285341900225,249.709134912513,391.086686734332,94.3900938808894,100.330506728139,88.9723023226019,114.983166877093,68.3596012828533,55.07203359305,57.5971284863571,45.365356268509,57.8844898112707,57.123880769444,52.0917972611172,69.2422918226512,83.304704126484,59.5749350510036,47.7689698052932,85.7364304721269,61.8356251689102,52.8514025917392,137.92990330141,33.6697916563279,42.7271281899448,135.136782205345,103.999528071139,70.1886195262287,74.8443637460351,36.6987066541816,45.292559679044,39.832429619778,39.9795936442236,64.6960107045736,42.8043371792694,48.9968614464628,70.5746791482692,61.2082295401658,70.2569268445616,59.9759289276451,39.1662533317738,40.9225745891582,50.9575827349138,49.2804754322788,50.6191553685879,47.786417666249,46.1012484833866,39.0642089815914,28.8861110530009,39.1449585947386,42.7561231718396,48.2230611340665,52.550930103638,61.9888856409456,69.5543621058849,43.58850443325,78.6478769790823,77.4617200415293,77.0083083362056,45.1534184127394,44.7944774563894,50.5974392705452,45.4549892323604,46.0428302288925,51.5252157043843,49.7622641765873,39.9727368085433,52.7779347499606,51.3426731730059,51.5485837208359,48.5602169179676,45.760596064129,42.1536221358817,39.3224806967889,41.4271198671331,41.7792726259895,143.732170597952,153.116878098192,42.870938357582,49.0019377625525,58.8924298241966,75.0262711598834,71.3833520742034,89.4060442729028,150.900241571155,91.243220917102,100.534083520108,89.5304124185179,99.6266485178704,125.834717211591,140.489732418551,147.961966027995,23.8981555200883,56.2102682039866,42.8289395557706,60.0771417143677,57.6038886887848,68.3824243930606,80.5001117591795,92.5515627832106,82.8953283002459,85.0206459421206,81.524472448966,42.0449666404557,44.0292149053575,42.4989392407374,52.5407714396223,45.3413060334544,54.9991839847867,50.059127916441,47.5056214450854,63.1491250332587,89.1362880469598,71.0789210046841,75.5131168937237,94.7170792301669,76.6026955738565,90.2169384949497,66.5111484599777,54.5735265898996,53.1265823201004,53.6394471049595,49.7543326371624,63.1498590555645,49.7511209451769,82.7366666917067,72.5121662888479,73.3048122737445,86.424484612358,65.5453258862952,77.3628718759212,80.1355784541574,49.7611236999598,60.9174365876955,117.53166125155,123.067788851911,37.0871862871799,47.8223681296189,89.8363500664181,53.5238365673271,44.4866589376922,46.0717718270033,43.5155263420254,48.032728388463,42.1089494015725,56.3322296269777,45.3387985875882,49.0989841291004,58.897878914032,37.5945940213514,67.8473607295524,34.900858318782,56.5217748956909,60.2140948849754,185.843193675948,69.4352619403247,71.650683000646,125.04516787816,106.89928522284,120.822013141963,104.66345873313,143.959356873092,129.765045732039,160.230636273459,189.753495434998,208.333797361337,56.8534141608826,49.5168008586103,30.1405733213818,47.1541477069503,57.1035552328121,54.0457517334274,58.4149023137529,34.1000743008351,99.2661325109495,127.099242518292,320.648290771915,65.7896149236505,67.0077370788008,69.6011153670919,55.8662569934679,60.7321329056727,131.166376483433,47.28345201268,42.7177201994632,57.1691624258126,55.1879691561741,30.7040584917646,39.3679375836552,39.1210676183154,110.485979496006,105.663346504362,108.625179410277,113.605803543799,41.7563511527099,67.9087020203675,80.2479682305983,75.0626982691943,93.459177283364,96.9674650506861,109.267868468894,125.119340268366,131.040737998003,182.673758047556,13.5286305284206,50.3870760168209,45.832001856616,53.6685279829572,48.3057739806714,47.8145835138902,44.9478224013238,58.5919731797775,40.7902849816015,23.1920755992966,24.4825505319186,56.5659905924439,44.1940969332558,37.6949212794916,40.4053759460943,36.5214459161662,44.7033048257846,46.6358344137479,57.7466051252597,47.4542314756294,53.8020054984299,51.9254853454729,56.9154023520154,56.5725628845137,60.8928660365974,77.3150608127871,64.8198983852269,74.3727871292554,90.4898082202383,62.4002388723975,102.849996547248,88.2790828968218,70.3128283379336,246.773475185399,41.2268845110459,53.3977274348325,52.1334917229851,57.5708160851353,58.2320141805046,61.9422995859554,45.226507515531,43.2308355095252,48.4862377613099,44.0096264989047,23.2483658588556,41.4985868337072,41.3175325925005,51.7817307355466,29.3458427679175,38.2394497576029,54.894941766999,56.453605683457,63.2210842895876,54.8352949527441,49.681942778487,56.965155098595,65.1744891990382,71.3240197790244,67.42924055389,73.8255221488764,69.5305955669133,76.5849605240909,71.290860838972,55.0523961302646,59.3163806626769,62.6489595742461,65.8083884254606,57.5571809864021,64.1825974432555,68.6224470001496,58.3540233464145,54.4554302676335,58.938985409104,37.5965322010685,64.1815448051782,68.6576242157677,63.8400427344715,70.6511995808005,57.4861700723801,39.9696924700714,53.3364067255531,60.5936372416201,48.5872363454862,54.9272633607594,61.4449764394117
|phase1_expression=83.2774004944929,162.971515367582,176.53970488314,116.751185564436,136.744534275353,206.323625179713,182.21785966451,58.1054955487093,139.099257485847,129.20361852974,101.532255157724,82.4844124011778,61.2898613153717,50.6164130005995,38.6407323706169,30.5737653758637,20.9868563438444,48.2657112998104,56.2169177783529,53.0487064747538,46.4336364224841,51.929167478063,45.7099630993137,145.593104742,153.933627596071,175.140749055081,233.903763914378,168.283032727679,215.866604502441,291.59886013224,240.799334571661,20.3209815507082,15.3766196896143,15.8481681015439,110.341318744987,119.688944658114,116.989041138337,124.303894328862,99.2295887545227,129.310364761528,147.646103495785,135.243006021772,124.776160729006,80.4480666863939,82.2166912190263,109.760957792686,25.0365230191373,39.8986036176217,43.2781779986909,67.6616048778506,40.4560758497298,35.9381410912429,59.3950425444387,69.6347656330891,48.3975070765148,142.521727563915,89.6849667008309,109.838155655095,29.5382032855013,25.3915670050576,27.2547503507657,47.7770790217476,30.2360230677787,33.2962895394118,27.6882581518753,30.5506449426823,22.1704081783619,25.3584081512226,34.73602012334,19.1708432431001,30.4971193959504,33.1355141908412,31.8050698970323,27.0704666265048,31.5331599649998,19.3035945188104,36.3382407297983,64.4821057330198,65.2827766339035,25.0583946687368,35.4972057177349,39.5894161623138,45.7860118362265,45.0210088025344,55.3129656952053,55.3901740690495,51.5385484492753,45.1086658897227,105.410861119792,101.417033663306,91.5971784297302,101.530017483804,53.7177353629123,104.162715986099,128.655730654638,99.0139420485112,69.6604323853489,92.2028045147292,80.7934474314922,97.1683829903436,80.2807492727079,89.8285341900225,249.709134912513,391.086686734332,94.3900938808894,100.330506728139,88.9723023226019,114.983166877093,68.3596012828533,55.07203359305,57.5971284863571,45.365356268509,57.8844898112707,57.123880769444,52.0917972611172,69.2422918226512,83.304704126484,59.5749350510036,47.7689698052932,85.7364304721269,61.8356251689102,52.8514025917392,137.92990330141,33.6697916563279,42.7271281899448,135.136782205345,103.999528071139,70.1886195262287,74.8443637460351,36.6987066541816,45.292559679044,39.832429619778,39.9795936442236,64.6960107045736,42.8043371792694,48.9968614464628,70.5746791482692,61.2082295401658,70.2569268445616,59.9759289276451,39.1662533317738,40.9225745891582,50.9575827349138,49.2804754322788,50.6191553685879,47.786417666249,46.1012484833866,39.0642089815914,28.8861110530009,39.1449585947386,42.7561231718396,48.2230611340665,52.550930103638,61.9888856409456,69.5543621058849,43.58850443325,78.6478769790823,77.4617200415293,77.0083083362056,45.1534184127394,44.7944774563894,50.5974392705452,45.4549892323604,46.0428302288925,51.5252157043843,49.7622641765873,39.9727368085433,52.7779347499606,51.3426731730059,51.5485837208359,48.5602169179676,45.760596064129,42.1536221358817,39.3224806967889,41.4271198671331,41.7792726259895,143.732170597952,153.116878098192,42.870938357582,49.0019377625525,58.8924298241966,75.0262711598834,71.3833520742034,89.4060442729028,150.900241571155,91.243220917102,100.534083520108,89.5304124185179,99.6266485178704,125.834717211591,140.489732418551,147.961966027995,23.8981555200883,56.2102682039866,42.8289395557706,60.0771417143677,57.6038886887848,68.3824243930606,80.5001117591795,92.5515627832106,82.8953283002459,85.0206459421206,81.524472448966,42.0449666404557,44.0292149053575,42.4989392407374,52.5407714396223,45.3413060334544,54.9991839847867,50.059127916441,47.5056214450854,63.1491250332587,89.1362880469598,71.0789210046841,75.5131168937237,94.7170792301669,76.6026955738565,90.2169384949497,66.5111484599777,54.5735265898996,53.1265823201004,53.6394471049595,49.7543326371624,63.1498590555645,49.7511209451769,82.7366666917067,72.5121662888479,73.3048122737445,86.424484612358,65.5453258862952,77.3628718759212,80.1355784541574,49.7611236999598,60.9174365876955,117.53166125155,123.067788851911,37.0871862871799,47.8223681296189,89.8363500664181,53.5238365673271,44.4866589376922,46.0717718270033,43.5155263420254,48.032728388463,42.1089494015725,56.3322296269777,45.3387985875882,49.0989841291004,58.897878914032,37.5945940213514,67.8473607295524,34.900858318782,56.5217748956909,60.2140948849754,185.843193675948,69.4352619403247,71.650683000646,125.04516787816,106.89928522284,120.822013141963,104.66345873313,143.959356873092,129.765045732039,160.230636273459,189.753495434998,208.333797361337,56.8534141608826,49.5168008586103,30.1405733213818,47.1541477069503,57.1035552328121,54.0457517334274,58.4149023137529,34.1000743008351,99.2661325109495,127.099242518292,320.648290771915,65.7896149236505,67.0077370788008,69.6011153670919,55.8662569934679,60.7321329056727,131.166376483433,47.28345201268,42.7177201994632,57.1691624258126,55.1879691561741,30.7040584917646,39.3679375836552,39.1210676183154,110.485979496006,105.663346504362,108.625179410277,113.605803543799,41.7563511527099,67.9087020203675,80.2479682305983,75.0626982691943,93.459177283364,96.9674650506861,109.267868468894,125.119340268366,131.040737998003,182.673758047556,13.5286305284206,50.3870760168209,45.832001856616,53.6685279829572,48.3057739806714,47.8145835138902,44.9478224013238,58.5919731797775,40.7902849816015,23.1920755992966,24.4825505319186,56.5659905924439,44.1940969332558,37.6949212794916,40.4053759460943,36.5214459161662,44.7033048257846,46.6358344137479,57.7466051252597,47.4542314756294,53.8020054984299,51.9254853454729,56.9154023520154,56.5725628845137,60.8928660365974,77.3150608127871,64.8198983852269,74.3727871292554,90.4898082202383,62.4002388723975,102.849996547248,88.2790828968218,70.3128283379336,246.773475185399,41.2268845110459,53.3977274348325,52.1334917229851,57.5708160851353,58.2320141805046,61.9422995859554,45.226507515531,43.2308355095252,48.4862377613099,44.0096264989047,23.2483658588556,41.4985868337072,41.3175325925005,51.7817307355466,29.3458427679175,38.2394497576029,54.894941766999,56.453605683457,63.2210842895876,54.8352949527441,49.681942778487,56.965155098595,65.1744891990382,71.3240197790244,67.42924055389,73.8255221488764,69.5305955669133,76.5849605240909,71.290860838972,55.0523961302646,59.3163806626769,62.6489595742461,65.8083884254606,57.5571809864021,64.1825974432555,68.6224470001496,58.3540233464145,54.4554302676335,58.938985409104,37.5965322010685,64.1815448051782,68.6576242157677,63.8400427344715,70.6511995808005,57.4861700723801,39.9696924700714,53.3364067255531,60.5936372416201,48.5872363454862,54.9272633607594,61.4449764394117
|short_description=p1@Tm9sf3
}}
}}

Revision as of 04:37, 18 April 2012

Short description:p1@Tm9sf3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tm9sf3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000025989, ENSMUST00000067800, ENSMUST00000164316, NM_133352, uc008hls.1, uc008hlt.1_5end
EntrezGene:Tm9sf3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tm9sf3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G783.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5162.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6176.54
CD326+ enterocyte, pool1.CNhs13542.11848-124I3116.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I4136.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7206.32
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8182.22
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E958.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7139.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2129.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6101.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F182.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E461.29
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E850.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A138.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.57
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A248.27
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A456.22
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A653.05
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A346.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H251.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I945.71
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1145.59
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2153.93
GP2+ M cell, pool1.CNhs13228.11845-124H9175.14
GP2+ M cell, pool2.CNhs13231.11846-124I1233.90
GP2+ M cell, pool3.CNhs13240.11847-124I2168.28
Ileum epithelium, pool1.CNhs13199.10252-104B9215.87
Ileum epithelium, pool2.CNhs13232.10253-104C1291.60
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8240.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5110.34
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6119.69
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7116.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8124.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H199.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3129.31
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9147.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2135.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4124.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D880.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D982.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3109.76
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B725.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B843.28
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C367.66
Mouse Astrocytes, donor2.CNhs12078.11552-120C440.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C435.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A259.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I969.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A148.40
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1142.52
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E189.68
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5109.84
Mouse Granule cells, donor1.CNhs12131.11713-123C329.54
Mouse Granule cells, donor2.CNhs12357.11731-123E325.39
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C647.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D130.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C733.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E727.69
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D230.55
Mouse Microglia, donor1.CNhs12629.11718-123C822.17
Mouse Microglia, donor2.CNhs12634.11736-123E825.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.17
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D930.50
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D227.07
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F231.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F364.48
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D765.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F435.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D839.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E445.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E545.02
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I655.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D655.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F651.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E145.11
Mouse Schwann, donor1.CNhs12507.11728-123D9105.41
Mouse Schwann, donor2.CNhs12573.11746-123F9101.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G391.60
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7101.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C453.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C8104.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F4128.66
Mouse hepatocyte, donor8.CNhs13091.11824-124F699.01
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A769.66
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I792.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E380.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I897.17
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G680.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H189.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8249.71
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6391.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G194.39
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2100.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G388.97
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6114.98
accessory axillary lymph node, adult.CNhs10475.1063-29H968.36
adrenal gland, adult.CNhs10508.49-24D755.07
adrenal gland, embryo E14.CNhs11038.406-44C557.60
adrenal gland, embryo E16.CNhs11004.1254-43D645.37
adrenal gland, embryo E17.CNhs11043.1263-45I157.88
adrenal gland, embryo E18.CNhs11026.1262-18F557.12
adrenal gland, neonate N00.CNhs11191.1311-23C152.09
adrenal gland, neonate N25.CNhs11223.1377-27I369.24
amnion, adult pregnant day17.5.CNhs10488.583-22A883.30
aorta, adult.CNhs10498.46-23H159.57
bone (os femoris), adult.CNhs10483.56-12G247.77
bone (os femoris), neonate N02.CNhs11227.1985-43F585.74
bone (os femoris), neonate N16.CNhs11225.1525-43A661.84
bone (os femoris), neonate N20.CNhs11195.1350-25C352.85
cecum, adult.CNhs10467.37-13H4137.93
cerebellum, adult.CNhs10494.15-8B233.67
cerebellum, neonate N30.CNhs11135.1395-42I242.73
colon, adult.CNhs10468.36-18H7135.14
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7104.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D170.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D474.84
corpora quadrigemina, adult.CNhs10501.16-22A436.70
corpus striatum, adult.CNhs10487.19-21D845.29
corpus striatum, neonate N00.CNhs11226.630-43F139.83
cortex, adult.CNhs10473.12-14D539.98
cortex, neonate N30.CNhs11107.1392-42F264.70
diencephalon, adult.CNhs10482.20-12F242.80
diencephalon, neonate N30.CNhs11201.1388-42B249.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B170.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A261.21
epididymis, adult.CNhs10490.58-23B270.26
eyeball, adult.CNhs10484.31-12G459.98
eyeball, embryo E12.CNhs11016.345-16C639.17
eyeball, embryo E14.CNhs10521.399-16E240.92
eyeball, embryo E15.CNhs10593.426-16C950.96
eyeball, embryo E17.CNhs11023.1261-18D449.28
eyeball, neonate N00.CNhs11207.633-15C650.62
eyeball, neonate N01.CNhs11140.1532-43E747.79
eyeball, neonate N02.CNhs11205.1551-44G846.10
eyeball, neonate N16.CNhs11188.777-19A239.06
forelimb, embryo E11.CNhs10596.335-25E228.89
forelimb, embryo E12.CNhs10600.359-14H239.14
forelimb, embryo E13.CNhs10589.384-1E242.76
forelimb, embryo E14.CNhs10577.413-26A848.22
forelimb, embryo E15.CNhs11007.437-20E752.55
forelimb, embryo E17.CNhs10598.1517-43C461.99
forelimb, embryo E18.CNhs11008.1520-43B569.55
gonad, embryo E13.CNhs11044.1564-45I643.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C878.65
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D277.46
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D577.01
heart, embryo E11.CNhs10586.331-24E945.15
heart, embryo E12.CNhs11015.353-12F544.79
heart, embryo E13.CNhs11013.376-3I950.60
heart, embryo E14.CNhs10597.403-26D445.45
heart, embryo E15.CNhs11017.431-16C846.04
heart, embryo E16.CNhs11021.457-17C651.53
heart, embryo E17.CNhs11025.479-18E549.76
heart, embryo E18.CNhs11030.1283-20G339.97
heart, neonate N00.CNhs11213.639-21E352.78
heart, neonate N03.CNhs11221.1349-25I251.34
heart, neonate N10.CNhs11118.749-24G151.55
heart, neonate N16.CNhs11209.782-15G148.56
heart, neonate N20.CNhs11127.821-26I645.76
heart, neonate N25.CNhs11196.1351-25D342.15
heart, neonate N30.CNhs11202.1390-42D239.32
hippocampus, adult.CNhs10478.13-16E841.43
hippocampus, neonate N00.CNhs11228.627-43G141.78
intestinal mucosa, adult.CNhs10506.860-29I3143.73
intestine, adult.CNhs10496.178-9A3153.12
intestine, embryo E12.CNhs11019.1251-16I542.87
intestine, embryo E13.CNhs11010.381-16D549.00
intestine, embryo E15.CNhs10602.976-16D858.89
intestine, embryo E16.CNhs10585.463-22H475.03
intestine, embryo E17.CNhs10582.482-18D371.38
intestine, embryo E18.CNhs10526.1289-20F789.41
intestine, neonate N00.CNhs11126.644-26D1150.90
intestine, neonate N01.CNhs11192.1322-23E991.24
intestine, neonate N06.CNhs11102.688-20B8100.53
intestine, neonate N07.CNhs11095.720-20F289.53
intestine, neonate N10.CNhs11098.755-23A599.63
intestine, neonate N20.CNhs11187.827-18D1125.83
intestine, neonate N25.CNhs11121.1352-25E3140.49
intestine, neonate N30.CNhs11131.1384-42G1147.96
kidney, embryo E14.CNhs10606.411-4I923.90
kidney, embryo E15.CNhs10997.434-16F856.21
kidney, embryo E16.CNhs10584.464-22A542.83
kidney, embryo E17.CNhs11028.483-18I260.08
kidney, embryo E18.CNhs11001.1288-20C757.60
kidney, neonate N00.CNhs11214.646-21G768.38
kidney, neonate N10.CNhs11206.758-6D580.50
kidney, neonate N20.CNhs11113.832-19I192.55
kidney, neonate N25.CNhs11122.1353-25F382.90
kidney, neonate N30.CNhs11203.1385-42H185.02
liver, adult pregnant day01.CNhs10466.508-5B281.52
liver, embryo E12.CNhs10601.355-15F842.04
liver, embryo E13.CNhs10524.378-3H644.03
liver, embryo E14.CNhs10594.409-16E142.50
liver, embryo E15.CNhs10520.433-16D752.54
liver, embryo E16.CNhs10523.462-17F545.34
liver, embryo E17.CNhs10510.481-18A355.00
liver, embryo E18.CNhs10579.499-43G450.06
liver, neonate N00.CNhs11117.641-24F447.51
liver, neonate N03.CNhs11123.1345-25G263.15
liver, neonate N06.CNhs11101.684-20A889.14
liver, neonate N07.CNhs11103.716-20H271.08
liver, neonate N10.CNhs11115.751-24B975.51
liver, neonate N20.CNhs11220.823-25A394.72
liver, neonate N25.CNhs11198.1368-26H176.60
liver, neonate N30.CNhs11106.1382-42D190.22
lung, adult.CNhs10474.28-22B166.51
lung, embryo E12.CNhs10522.354-16G254.57
lung, embryo E14.CNhs10604.404-26F853.13
lung, embryo E15.CNhs11020.432-17C553.64
lung, embryo E16.CNhs10998.458-17B649.75
lung, embryo E17.CNhs10605.480-44A663.15
lung, embryo E18.CNhs10583.1287-20I649.75
lung, neonate N00.CNhs11224.640-42C682.74
lung, neonate N06.CNhs11212.683-20E572.51
lung, neonate N07.CNhs11111.715-19A373.30
lung, neonate N10.CNhs11219.750-23E686.42
lung, neonate N20.CNhs11109.822-18A465.55
lung, neonate N25.CNhs11119.1359-25C777.36
lung, neonate N30.CNhs11133.1394-42H280.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A149.76
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A160.92
mammary gland, adult lactating day02.CNhs10480.595-22B6117.53
mammary gland, adult pregnant day19.CNhs10476.588-5H2123.07
medulla oblongata, adult.CNhs10477.17-12C237.09
medulla oblongata, neonate N30.CNhs11200.1396-42A347.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C789.84
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C253.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E144.49
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E246.07
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E343.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D748.03
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D842.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D956.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D445.34
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D549.10
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D658.90
olfactory brain, adult.CNhs10489.18-22I937.59
ovary, adult.CNhs10507.91-2I767.85
ovary, embryo E18.CNhs11040.505-44H734.90
ovary, neonate N00.CNhs11217.1299-22I456.52
oviduct, adult pregnant day01.CNhs10500.988-6G660.21
pancreas, adult.CNhs10486.34-16E4185.84
pancreas, embryo E14.CNhs11012.405-44F469.44
pancreas, embryo E15.CNhs11042.1556-45F271.65
pancreas, embryo E16.CNhs11003.460-26E5125.05
pancreas, embryo E17.CNhs10599.1558-45G3106.90
pancreas, embryo E18.CNhs10580.1535-43I7120.82
pancreas, neonate N00.CNhs11105.645-26G9104.66
pancreas, neonate N01.CNhs11138.1531-43D7143.96
pancreas, neonate N02.CNhs11139.1539-43D8129.77
pancreas, neonate N16.CNhs11136.787-43B6160.23
pancreas, neonate N25.CNhs11094.1555-45E2189.75
pancreas, neonate N30.CNhs11182.1548-44H5208.33
pituitary gland, adult.CNhs10493.21-1G856.85
pituitary gland, embryo E12.CNhs11018.346-16E649.52
pituitary gland, embryo E13.CNhs11009.370-44C730.14
pituitary gland, embryo E14.CNhs11037.398-44A547.15
pituitary gland, embryo E15.CNhs10592.427-16B957.10
pituitary gland, embryo E16.CNhs11036.449-43F654.05
pituitary gland, embryo E17.CNhs11039.1265-44F558.41
pituitary gland, neonate N00.CNhs11190.1308-22E934.10
placenta, adult pregnant day10.CNhs10472.539-13I799.27
placenta, adult pregnant day17.CNhs10464.577-18G3127.10
prostate, adult.CNhs10470.859-1F8320.65
skin, adult.CNhs10492.30-1C365.79
skin, neonate N00.CNhs11124.650-25G467.01
skin, neonate N03.CNhs11215.662-22H369.60
skin, neonate N06.CNhs11097.693-20I555.87
skin, neonate N10.CNhs11108.762-6C460.73
small intestine, neonate N16.CNhs11114.790-21I1131.17
spinal cord, adult.CNhs10505.24-13C947.28
spleen, adult.CNhs10465.25-2G242.72
spleen, embryo E16.CNhs11035.461-43C157.17
spleen, embryo E18.CNhs11011.1271-21F255.19
spleen, neonate N10.CNhs11116.752-24D130.70
spleen, neonate N20.CNhs11112.824-19H139.37
spleen, neonate N25.CNhs11099.1354-25G339.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6110.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9105.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3108.63
stomach, adult.CNhs10503.33-1H6113.61
stomach, embryo E12.CNhs10588.356-43E341.76
stomach, embryo E15.CNhs10603.1252-16G867.91
stomach, embryo E16.CNhs11022.459-17D480.25
stomach, embryo E17.CNhs11006.1035-18D575.06
stomach, embryo E18.CNhs10999.1286-20C693.46
stomach, neonate N03.CNhs11193.1340-24B896.97
stomach, neonate N07.CNhs11210.718-18A9109.27
stomach, neonate N25.CNhs11104.1355-25E4125.12
stomach, neonate N30.CNhs11134.1386-42I1131.04
submandibular gland, adult.CNhs10469.59-29C1182.67
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F550.39
testis, embryo E15.CNhs11034.443-27C545.83
testis, embryo E16.CNhs11033.470-26G553.67
testis, embryo E17.CNhs11029.486-18I548.31
testis, embryo E18.CNhs11027.503-18G547.81
testis, neonate N00.CNhs11189.1300-22B744.95
testis, neonate N07.CNhs11222.726-26I458.59
testis, neonate N10.CNhs11204.763-44D940.79
testis, neonate N20.CNhs11110.839-18H323.19
testis, neonate N30.CNhs11130.1391-42E224.48
thymus, adult.CNhs10471.38-12B556.57
thymus, embryo E14.CNhs11041.402-44I444.19
thymus, embryo E15.CNhs11005.430-45I237.69
thymus, embryo E16.CNhs11002.456-26C540.41
thymus, embryo E17.CNhs10581.478-18C136.52
thymus, embryo E18.CNhs10595.1273-19G444.70
thymus, neonate N02.CNhs11181.1541-43F846.64
thymus, neonate N03.CNhs11137.2104-43C757.75
thymus, neonate N06.CNhs11197.681-26C447.45
thymus, neonate N07.CNhs11211.713-19D353.80
thymus, neonate N10.CNhs11194.748-24E451.93
thymus, neonate N20.CNhs11186.820-7A256.92
thymus, neonate N25.CNhs11125.1362-25G756.57
thymus, neonate N30.CNhs11132.1393-42G260.89
tongue, adult.CNhs10499.32-1B477.32
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H364.82
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F774.37
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G590.49
urinary bladder, adult.CNhs10481.879-12E462.40
uterus, adult pregnant day19.CNhs10497.590-15F5102.85
uterus, adult.CNhs10509.92-27E588.28
vagina, adult.CNhs10502.89-27D570.31
vesicular gland, adult.CNhs10491.51-27F8246.77
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A253.40
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A352.13
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D757.57
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A458.23
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.94
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A645.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A743.23
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A848.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A944.01
whole body, embryo E11.CNhs11014.324-5I823.25
whole body, embryo E12.CNhs10587.857-27C941.50
whole body, embryo E13.CNhs10512.372-23H241.32
whole body, embryo E14.5.CNhs10578.420-27D251.78
whole body, embryo E14.CNhs10519.395-14B129.35
whole body, embryo E16.CNhs10514.453-14F238.24
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G554.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G556.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G563.22
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G554.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G549.68
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G556.97
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G565.17
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G571.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G567.43
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G573.83
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G569.53
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G576.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G571.29
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G555.05
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G559.32
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G562.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G565.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G557.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G564.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G568.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G558.35
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G554.46
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G558.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G537.60
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G564.18
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G568.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G563.84
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G570.65
whole body, embryo E17.5.CNhs10513.490-9F957.49
whole body, embryo E17.CNhs10517.475-3I539.97
whole body, embryo E18.CNhs10516.493-3B353.34
whole body, neonate N00.CNhs10525.657-19C260.59
whole body, neonate N01.CNhs10576.659-23C648.59
whole body, neonate N06.CNhs10515.692-21D154.93
whole body, neonate N10.CNhs10518.761-6B461.44





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:41338421..41338498,-&oldid=823032"