Personal tools

FFCP PHASE1:Mm9::chr16:38089567..38089622,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr16:38089567..38089622,+
|short_description=p1@Gsk3b
|description=CAGE_peak_1_at_Gsk3b_5end
|association_with_transcript=480bp_to_ENSMUST00000023507,NM_019827,uc007zen.1_5end
|EntrezGene=56637
|EntrezGene=56637
|HGNC=
|HGNC=
|UniProt=Q9WV60,Q5KU03
|UniProt=Q9WV60,Q5KU03
|association_with_transcript=480bp_to_ENSMUST00000023507,NM_019827,uc007zen.1_5end
|description=CAGE_peak_1_at_Gsk3b_5end
|id=chr16:38089567..38089622,+
|ontology_enrichment_disease=
|phase1_expression=69.5045996434806,84.8010240563647,90.0898493991281,155.466604611711,178.819775590846,60.6044171601922,49.5258798062514,55.2647824329946,42.0958279233484,43.7700664222128,8.73211637950075,13.6410391882025,61.8034635051653,63.7294733634491,17.3217076144145,19.2351504020335,12.5921138063066,30.5998300397491,32.4961207645601,28.8584963222661,60.6358658777128,26.0142292146319,24.291580389921,45.5978404961209,41.2936705920906,66.0366758732273,55.1375355083616,46.9727287255238,51.6863700921337,52.1702368603057,37.9159173220571,14.6057054895715,16.6067492647834,15.8481681015439,26.285497397366,19.6156881523021,28.1753711642069,63.61680787201,35.9414258480948,40.3113282859825,72.9407045158458,68.3045484958446,65.0583873061746,47.5889971947682,50.1815809536597,44.0512205188036,39.119567217402,35.7561256463932,33.8316721411087,35.9695313287424,43.1158178606117,33.0630898039435,23.1539996359676,55.8528849348735,56.1276644567915,48.8792928468299,50.4298854292212,52.5985534122991,152.141978566418,123.783889149656,131.836931929285,36.2563649313971,28.4574334755565,31.496490104849,22.7439263390404,24.8668040231135,34.1544125990981,30.7374644257244,145.891284518028,125.015498895146,135.238950148939,107.690421120234,96.5195523958551,123.838198006319,110.413982613008,94.6795350208322,93.5984988494804,90.4026353643129,94.7752310191022,151.405458314263,136.133613680386,109.39180781692,79.5671547153936,79.9122906244986,86.6366064894513,149.082064249676,144.934371053487,133.648402656741,59.2936093798831,77.0829913089212,56.8134397855288,31.8356834483113,55.0776780303278,26.9851595818909,27.9403859502498,41.2184736129549,49.5768803065084,50.276945160527,33.2526085891672,38.5140136216271,63.6612257390596,97.5281228348816,96.8259910885254,127.9920065676,18.185247444942,21.5355885653834,19.7154533555765,53.5522395882391,87.2620667890969,62.6425826853561,53.2599953172037,49.0189420082547,45.6618684566996,44.312456322471,68.5542162601159,44.3603067393754,95.1700625777339,84.7352231550682,36.2690326299448,60.9861024301733,49.2476586166678,47.0328995541165,31.6865994070808,106.279429315192,99.2777390295777,55.9450950906815,17.2533779288525,13.7977628128484,19.3146745151058,134.062622267316,123.982663363848,152.921346521356,94.3866058644061,91.5461337242583,133.399924607238,106.916992361652,75.5648079769347,46.777020949395,53.3245020295054,132.999252920252,68.7035938843076,65.5220997635398,88.7706299940372,78.5172100924075,110.69538411921,104.540795752437,109.349912561204,123.918914583989,74.3709575618306,85.0977360755187,86.9198553369907,61.374805079721,72.2922847986555,76.6154766348766,71.4064013335564,62.4967597810069,10.5331978096985,16.4702660553418,19.0389544595047,67.1087503015026,53.2374156157088,48.796818655935,71.0234206755631,57.0616272067471,56.7702975425552,59.5286898561044,53.3864068785242,56.8647217328115,57.7605073196316,56.3094401791297,80.0959838313055,61.4039947186396,64.986834126151,61.3323333734899,103.672944642115,163.721238295442,106.394848120783,55.7990695660078,65.9060694153873,72.6900782923173,71.2637061111176,61.1101079608728,60.042071838115,55.5458828248673,62.6378361238755,53.5271602853035,55.5450811448596,55.9067686435634,54.3949803062345,44.0421510240569,55.7636168676711,56.1578390577316,57.8487097906899,58.4952384561812,127.359741310581,68.6304974838709,60.7071284834669,66.7693005355833,65.9557082206004,57.863178008004,52.7515725547019,47.631305273815,38.2423888942422,35.0374722003798,36.1668551008294,28.5574882728764,31.2404586938294,29.1824363300424,30.0458505102075,43.4421167550724,31.2920987675818,28.8289483847486,41.6927798929328,42.7962089818779,27.7713529071959,36.118779546437,43.0553792452589,56.9283355208773,89.2357908504701,64.4270800019648,73.3342393989116,61.6174661363933,58.6725620721255,80.5705098295134,102.834852862758,84.1026022267113,88.7485861317855,84.8209761354808,90.5703085974527,73.9023549367978,64.7568681997108,77.3872463411087,43.729472342389,32.0904353453039,49.1764273019036,62.6376414111743,105.481737621979,102.794649141362,33.7705987475951,75.7412781613119,74.7754480016528,73.0120451834714,82.507161331662,72.4075457796233,90.6790603515344,106.153699045812,89.0583543684768,84.4619429363691,81.0339944790373,145.558556339079,89.9900140220423,64.6378141312136,85.0269927825667,110.035072022681,37.1686387351896,44.1860757802066,38.9997388484529,38.4754362702032,46.3623971822813,63.3316404764491,67.9666411032422,49.8041209384183,48.4836434603221,63.2073515871632,36.8965130012496,43.3169281642385,50.7255012573144,75.6256594931503,64.5499832075945,70.7312215604255,89.7341582229904,78.4822797449111,71.7433729825247,47.1920671127629,84.7164866109994,100.196569518587,69.245916989258,107.340950664904,86.3834682823095,74.7277139859851,60.0442890335776,72.8785594868072,64.417264895197,109.03007758218,36.5663684907405,52.835038198585,43.705908459252,24.1111624966004,27.7489282273681,27.4533807847827,23.2870449091582,25.1912614182584,27.2253948394715,27.6854479224383,77.0278144370065,70.1452161587628,58.5388947254163,53.1084271876751,50.6601147891132,54.7549246322372,64.3043885543114,47.1160695571253,52.4940641831761,62.7552706217795,31.0031116276305,69.2261608183622,54.9322188317564,61.4465755167191,57.9927607415013,61.3310735531525,66.6589115507882,51.0401188588284,48.235298435827,30.9227674657288,37.7319308197804,86.903058172749,38.9232413357115,39.9545623371178,38.3266427784495,65.5237706142982,66.1608911421612,58.4149884667049,57.7466051252597,64.8204608667108,68.2812987628799,71.2841128917462,91.8053236568468,72.0626693886068,75.7362326136567,76.6348696619414,44.8411625815611,40.9095186139209,48.6865387455828,74.5711832964255,77.5128623613382,87.3633247754854,74.3858275404359,59.6870803802082,134.410938542862,125.668789566459,122.599639876031,92.8007184655913,64.3977568584404,73.2732080468009,60.7520250208625,58.0914352159244,55.283373896073,55.9181136691966,89.4646936175603,158.81189961361,82.8057987907551,91.8943390518152,79.8626149612613,94.4955633433073,83.7870163812089,91.0674952995912,84.4017521226474,90.2129045996757,78.3251036660841,83.9387219168039,76.6923946178337,89.8913139764365,91.9541857979368,83.827689665821,79.1489946203363,77.7424158468731,83.2413519622679,77.426631990693,71.6596737485518,74.1848869746031,71.0539846043016,72.2371690662673,76.6050356580791,74.7146987683503,75.9151087422006,73.3964494911582,72.2477885659985,83.610198477003,85.5358480675296,79.197603829953,61.7938875186231,73.4400627221479,77.5484576144188,104.920442733937,71.1152089674042,80.3617742140636,80.5323878009831,73.0157597285596,68.6328793436448
|phase1_expression=69.5045996434806,84.8010240563647,90.0898493991281,155.466604611711,178.819775590846,60.6044171601922,49.5258798062514,55.2647824329946,42.0958279233484,43.7700664222128,8.73211637950075,13.6410391882025,61.8034635051653,63.7294733634491,17.3217076144145,19.2351504020335,12.5921138063066,30.5998300397491,32.4961207645601,28.8584963222661,60.6358658777128,26.0142292146319,24.291580389921,45.5978404961209,41.2936705920906,66.0366758732273,55.1375355083616,46.9727287255238,51.6863700921337,52.1702368603057,37.9159173220571,14.6057054895715,16.6067492647834,15.8481681015439,26.285497397366,19.6156881523021,28.1753711642069,63.61680787201,35.9414258480948,40.3113282859825,72.9407045158458,68.3045484958446,65.0583873061746,47.5889971947682,50.1815809536597,44.0512205188036,39.119567217402,35.7561256463932,33.8316721411087,35.9695313287424,43.1158178606117,33.0630898039435,23.1539996359676,55.8528849348735,56.1276644567915,48.8792928468299,50.4298854292212,52.5985534122991,152.141978566418,123.783889149656,131.836931929285,36.2563649313971,28.4574334755565,31.496490104849,22.7439263390404,24.8668040231135,34.1544125990981,30.7374644257244,145.891284518028,125.015498895146,135.238950148939,107.690421120234,96.5195523958551,123.838198006319,110.413982613008,94.6795350208322,93.5984988494804,90.4026353643129,94.7752310191022,151.405458314263,136.133613680386,109.39180781692,79.5671547153936,79.9122906244986,86.6366064894513,149.082064249676,144.934371053487,133.648402656741,59.2936093798831,77.0829913089212,56.8134397855288,31.8356834483113,55.0776780303278,26.9851595818909,27.9403859502498,41.2184736129549,49.5768803065084,50.276945160527,33.2526085891672,38.5140136216271,63.6612257390596,97.5281228348816,96.8259910885254,127.9920065676,18.185247444942,21.5355885653834,19.7154533555765,53.5522395882391,87.2620667890969,62.6425826853561,53.2599953172037,49.0189420082547,45.6618684566996,44.312456322471,68.5542162601159,44.3603067393754,95.1700625777339,84.7352231550682,36.2690326299448,60.9861024301733,49.2476586166678,47.0328995541165,31.6865994070808,106.279429315192,99.2777390295777,55.9450950906815,17.2533779288525,13.7977628128484,19.3146745151058,134.062622267316,123.982663363848,152.921346521356,94.3866058644061,91.5461337242583,133.399924607238,106.916992361652,75.5648079769347,46.777020949395,53.3245020295054,132.999252920252,68.7035938843076,65.5220997635398,88.7706299940372,78.5172100924075,110.69538411921,104.540795752437,109.349912561204,123.918914583989,74.3709575618306,85.0977360755187,86.9198553369907,61.374805079721,72.2922847986555,76.6154766348766,71.4064013335564,62.4967597810069,10.5331978096985,16.4702660553418,19.0389544595047,67.1087503015026,53.2374156157088,48.796818655935,71.0234206755631,57.0616272067471,56.7702975425552,59.5286898561044,53.3864068785242,56.8647217328115,57.7605073196316,56.3094401791297,80.0959838313055,61.4039947186396,64.986834126151,61.3323333734899,103.672944642115,163.721238295442,106.394848120783,55.7990695660078,65.9060694153873,72.6900782923173,71.2637061111176,61.1101079608728,60.042071838115,55.5458828248673,62.6378361238755,53.5271602853035,55.5450811448596,55.9067686435634,54.3949803062345,44.0421510240569,55.7636168676711,56.1578390577316,57.8487097906899,58.4952384561812,127.359741310581,68.6304974838709,60.7071284834669,66.7693005355833,65.9557082206004,57.863178008004,52.7515725547019,47.631305273815,38.2423888942422,35.0374722003798,36.1668551008294,28.5574882728764,31.2404586938294,29.1824363300424,30.0458505102075,43.4421167550724,31.2920987675818,28.8289483847486,41.6927798929328,42.7962089818779,27.7713529071959,36.118779546437,43.0553792452589,56.9283355208773,89.2357908504701,64.4270800019648,73.3342393989116,61.6174661363933,58.6725620721255,80.5705098295134,102.834852862758,84.1026022267113,88.7485861317855,84.8209761354808,90.5703085974527,73.9023549367978,64.7568681997108,77.3872463411087,43.729472342389,32.0904353453039,49.1764273019036,62.6376414111743,105.481737621979,102.794649141362,33.7705987475951,75.7412781613119,74.7754480016528,73.0120451834714,82.507161331662,72.4075457796233,90.6790603515344,106.153699045812,89.0583543684768,84.4619429363691,81.0339944790373,145.558556339079,89.9900140220423,64.6378141312136,85.0269927825667,110.035072022681,37.1686387351896,44.1860757802066,38.9997388484529,38.4754362702032,46.3623971822813,63.3316404764491,67.9666411032422,49.8041209384183,48.4836434603221,63.2073515871632,36.8965130012496,43.3169281642385,50.7255012573144,75.6256594931503,64.5499832075945,70.7312215604255,89.7341582229904,78.4822797449111,71.7433729825247,47.1920671127629,84.7164866109994,100.196569518587,69.245916989258,107.340950664904,86.3834682823095,74.7277139859851,60.0442890335776,72.8785594868072,64.417264895197,109.03007758218,36.5663684907405,52.835038198585,43.705908459252,24.1111624966004,27.7489282273681,27.4533807847827,23.2870449091582,25.1912614182584,27.2253948394715,27.6854479224383,77.0278144370065,70.1452161587628,58.5388947254163,53.1084271876751,50.6601147891132,54.7549246322372,64.3043885543114,47.1160695571253,52.4940641831761,62.7552706217795,31.0031116276305,69.2261608183622,54.9322188317564,61.4465755167191,57.9927607415013,61.3310735531525,66.6589115507882,51.0401188588284,48.235298435827,30.9227674657288,37.7319308197804,86.903058172749,38.9232413357115,39.9545623371178,38.3266427784495,65.5237706142982,66.1608911421612,58.4149884667049,57.7466051252597,64.8204608667108,68.2812987628799,71.2841128917462,91.8053236568468,72.0626693886068,75.7362326136567,76.6348696619414,44.8411625815611,40.9095186139209,48.6865387455828,74.5711832964255,77.5128623613382,87.3633247754854,74.3858275404359,59.6870803802082,134.410938542862,125.668789566459,122.599639876031,92.8007184655913,64.3977568584404,73.2732080468009,60.7520250208625,58.0914352159244,55.283373896073,55.9181136691966,89.4646936175603,158.81189961361,82.8057987907551,91.8943390518152,79.8626149612613,94.4955633433073,83.7870163812089,91.0674952995912,84.4017521226474,90.2129045996757,78.3251036660841,83.9387219168039,76.6923946178337,89.8913139764365,91.9541857979368,83.827689665821,79.1489946203363,77.7424158468731,83.2413519622679,77.426631990693,71.6596737485518,74.1848869746031,71.0539846043016,72.2371690662673,76.6050356580791,74.7146987683503,75.9151087422006,73.3964494911582,72.2477885659985,83.610198477003,85.5358480675296,79.197603829953,61.7938875186231,73.4400627221479,77.5484576144188,104.920442733937,71.1152089674042,80.3617742140636,80.5323878009831,73.0157597285596,68.6328793436448
|short_description=p1@Gsk3b
}}
}}

Revision as of 00:32, 18 April 2012

Short description:p1@Gsk3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gsk3b_5end
Coexpression cluster:NA
Association with transcript: 480bp_to_ENSMUST00000023507, NM_019827, uc007zen.1_5end
EntrezGene:Gsk3b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gsk3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G769.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I584.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I690.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I3155.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I4178.82
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I760.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I849.53
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E955.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E742.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F243.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F113.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E461.80
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E863.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A319.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A230.60
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A432.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.86
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A360.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H226.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.29
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D145.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D241.29
GP2+ M cell, pool1.CNhs13228.11845-124H966.04
GP2+ M cell, pool2.CNhs13231.11846-124I155.14
GP2+ M cell, pool3.CNhs13240.11847-124I246.97
Ileum epithelium, pool1.CNhs13199.10252-104B951.69
Ileum epithelium, pool2.CNhs13232.10253-104C152.17
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C837.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I314.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G616.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F526.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.62
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F728.18
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G863.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H135.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H340.31
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G972.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H268.30
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H465.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D847.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D950.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B344.05
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B739.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C235.76
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B833.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C335.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C443.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C433.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A223.15
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I955.85
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A156.13
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C148.88
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E150.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C552.60
Mouse Granule cells, donor1.CNhs12131.11713-123C3152.14
Mouse Granule cells, donor2.CNhs12357.11731-123E3123.78
Mouse Granule cells, donor3.CNhs12108.11636-122C7131.84
Mouse Meningeal cells, donor1.CNhs12132.11716-123C636.26
Mouse Meningeal cells, donor3.CNhs12109.11639-122D128.46
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C731.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E722.74
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.87
Mouse Microglia, donor1.CNhs12629.11718-123C834.15
Mouse Microglia, donor2.CNhs12634.11736-123E830.74
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5145.89
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5125.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9135.24
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1107.69
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D596.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2123.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2110.41
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D694.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D393.60
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F390.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D794.78
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4151.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4136.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8109.39
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E479.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E579.91
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I686.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6149.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6144.93
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1133.65
Mouse Schwann, donor1.CNhs12507.11728-123D959.29
Mouse Schwann, donor2.CNhs12573.11746-123F977.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G356.81
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F731.84
Mouse hepatocyte, donor1.CNhs13078.11714-123C455.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C826.99
Mouse hepatocyte, donor6.CNhs13090.11822-124F427.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F641.22
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A749.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I750.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E333.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I838.51
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G663.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H197.53
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I896.83
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6127.99
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G118.19
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G221.54
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.72
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B653.55
accessory axillary lymph node, adult.CNhs10475.1063-29H987.26
adrenal gland, adult.CNhs10508.49-24D762.64
adrenal gland, embryo E14.CNhs11038.406-44C553.26
adrenal gland, embryo E16.CNhs11004.1254-43D649.02
adrenal gland, embryo E17.CNhs11043.1263-45I145.66
adrenal gland, embryo E18.CNhs11026.1262-18F544.31
adrenal gland, neonate N00.CNhs11191.1311-23C168.55
adrenal gland, neonate N25.CNhs11223.1377-27I344.36
amnion, adult pregnant day17.5.CNhs10488.583-22A895.17
aorta, adult.CNhs10498.46-23H184.74
bone (os femoris), adult.CNhs10483.56-12G236.27
bone (os femoris), neonate N02.CNhs11227.1985-43F560.99
bone (os femoris), neonate N16.CNhs11225.1525-43A649.25
bone (os femoris), neonate N20.CNhs11195.1350-25C347.03
cecum, adult.CNhs10467.37-13H431.69
cerebellum, adult.CNhs10494.15-8B2106.28
cerebellum, neonate N30.CNhs11135.1395-42I299.28
colon, adult.CNhs10468.36-18H755.95
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.25
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.31
corpora quadrigemina, adult.CNhs10501.16-22A4134.06
corpus striatum, adult.CNhs10487.19-21D8123.98
corpus striatum, neonate N00.CNhs11226.630-43F1152.92
cortex, adult.CNhs10473.12-14D594.39
cortex, neonate N30.CNhs11107.1392-42F291.55
diencephalon, adult.CNhs10482.20-12F2133.40
diencephalon, neonate N30.CNhs11201.1388-42B2106.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B175.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A246.78
epididymis, adult.CNhs10490.58-23B253.32
eyeball, adult.CNhs10484.31-12G4133.00
eyeball, embryo E12.CNhs11016.345-16C668.70
eyeball, embryo E14.CNhs10521.399-16E265.52
eyeball, embryo E15.CNhs10593.426-16C988.77
eyeball, embryo E17.CNhs11023.1261-18D478.52
eyeball, neonate N00.CNhs11207.633-15C6110.70
eyeball, neonate N01.CNhs11140.1532-43E7104.54
eyeball, neonate N02.CNhs11205.1551-44G8109.35
eyeball, neonate N16.CNhs11188.777-19A2123.92
forelimb, embryo E11.CNhs10596.335-25E274.37
forelimb, embryo E12.CNhs10600.359-14H285.10
forelimb, embryo E13.CNhs10589.384-1E286.92
forelimb, embryo E14.CNhs10577.413-26A861.37
forelimb, embryo E15.CNhs11007.437-20E772.29
forelimb, embryo E17.CNhs10598.1517-43C476.62
forelimb, embryo E18.CNhs11008.1520-43B571.41
gonad, embryo E13.CNhs11044.1564-45I662.50
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C810.53
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.47
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.04
heart, embryo E11.CNhs10586.331-24E967.11
heart, embryo E12.CNhs11015.353-12F553.24
heart, embryo E13.CNhs11013.376-3I948.80
heart, embryo E14.CNhs10597.403-26D471.02
heart, embryo E15.CNhs11017.431-16C857.06
heart, embryo E16.CNhs11021.457-17C656.77
heart, embryo E17.CNhs11025.479-18E559.53
heart, embryo E18.CNhs11030.1283-20G353.39
heart, neonate N00.CNhs11213.639-21E356.86
heart, neonate N03.CNhs11221.1349-25I257.76
heart, neonate N10.CNhs11118.749-24G156.31
heart, neonate N16.CNhs11209.782-15G180.10
heart, neonate N20.CNhs11127.821-26I661.40
heart, neonate N25.CNhs11196.1351-25D364.99
heart, neonate N30.CNhs11202.1390-42D261.33
hippocampus, adult.CNhs10478.13-16E8103.67
hippocampus, neonate N00.CNhs11228.627-43G1163.72
intestinal mucosa, adult.CNhs10506.860-29I3106.39
intestine, adult.CNhs10496.178-9A355.80
intestine, embryo E12.CNhs11019.1251-16I565.91
intestine, embryo E13.CNhs11010.381-16D572.69
intestine, embryo E15.CNhs10602.976-16D871.26
intestine, embryo E16.CNhs10585.463-22H461.11
intestine, embryo E17.CNhs10582.482-18D360.04
intestine, embryo E18.CNhs10526.1289-20F755.55
intestine, neonate N00.CNhs11126.644-26D162.64
intestine, neonate N01.CNhs11192.1322-23E953.53
intestine, neonate N06.CNhs11102.688-20B855.55
intestine, neonate N07.CNhs11095.720-20F255.91
intestine, neonate N10.CNhs11098.755-23A554.39
intestine, neonate N20.CNhs11187.827-18D144.04
intestine, neonate N25.CNhs11121.1352-25E355.76
intestine, neonate N30.CNhs11131.1384-42G156.16
kidney, embryo E14.CNhs10606.411-4I957.85
kidney, embryo E15.CNhs10997.434-16F858.50
kidney, embryo E16.CNhs10584.464-22A5127.36
kidney, embryo E17.CNhs11028.483-18I268.63
kidney, embryo E18.CNhs11001.1288-20C760.71
kidney, neonate N00.CNhs11214.646-21G766.77
kidney, neonate N10.CNhs11206.758-6D565.96
kidney, neonate N20.CNhs11113.832-19I157.86
kidney, neonate N25.CNhs11122.1353-25F352.75
kidney, neonate N30.CNhs11203.1385-42H147.63
liver, adult pregnant day01.CNhs10466.508-5B238.24
liver, embryo E12.CNhs10601.355-15F835.04
liver, embryo E13.CNhs10524.378-3H636.17
liver, embryo E14.CNhs10594.409-16E128.56
liver, embryo E15.CNhs10520.433-16D731.24
liver, embryo E16.CNhs10523.462-17F529.18
liver, embryo E17.CNhs10510.481-18A330.05
liver, embryo E18.CNhs10579.499-43G443.44
liver, neonate N00.CNhs11117.641-24F431.29
liver, neonate N03.CNhs11123.1345-25G228.83
liver, neonate N06.CNhs11101.684-20A841.69
liver, neonate N07.CNhs11103.716-20H242.80
liver, neonate N10.CNhs11115.751-24B927.77
liver, neonate N20.CNhs11220.823-25A336.12
liver, neonate N25.CNhs11198.1368-26H143.06
liver, neonate N30.CNhs11106.1382-42D156.93
lung, adult.CNhs10474.28-22B189.24
lung, embryo E12.CNhs10522.354-16G264.43
lung, embryo E14.CNhs10604.404-26F873.33
lung, embryo E15.CNhs11020.432-17C561.62
lung, embryo E16.CNhs10998.458-17B658.67
lung, embryo E17.CNhs10605.480-44A680.57
lung, embryo E18.CNhs10583.1287-20I6102.83
lung, neonate N00.CNhs11224.640-42C684.10
lung, neonate N06.CNhs11212.683-20E588.75
lung, neonate N07.CNhs11111.715-19A384.82
lung, neonate N10.CNhs11219.750-23E690.57
lung, neonate N20.CNhs11109.822-18A473.90
lung, neonate N25.CNhs11119.1359-25C764.76
lung, neonate N30.CNhs11133.1394-42H277.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A143.73
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A132.09
mammary gland, adult lactating day02.CNhs10480.595-22B649.18
mammary gland, adult pregnant day19.CNhs10476.588-5H262.64
medulla oblongata, adult.CNhs10477.17-12C2105.48
medulla oblongata, neonate N30.CNhs11200.1396-42A3102.79
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C733.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C275.74
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E174.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E273.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E382.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D772.41
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D890.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9106.15
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D489.06
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D584.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D681.03
olfactory brain, adult.CNhs10489.18-22I9145.56
ovary, adult.CNhs10507.91-2I789.99
ovary, embryo E18.CNhs11040.505-44H764.64
ovary, neonate N00.CNhs11217.1299-22I485.03
oviduct, adult pregnant day01.CNhs10500.988-6G6110.04
pancreas, adult.CNhs10486.34-16E437.17
pancreas, embryo E14.CNhs11012.405-44F444.19
pancreas, embryo E15.CNhs11042.1556-45F239.00
pancreas, embryo E16.CNhs11003.460-26E538.48
pancreas, embryo E17.CNhs10599.1558-45G346.36
pancreas, embryo E18.CNhs10580.1535-43I763.33
pancreas, neonate N00.CNhs11105.645-26G967.97
pancreas, neonate N01.CNhs11138.1531-43D749.80
pancreas, neonate N02.CNhs11139.1539-43D848.48
pancreas, neonate N16.CNhs11136.787-43B663.21
pancreas, neonate N25.CNhs11094.1555-45E236.90
pancreas, neonate N30.CNhs11182.1548-44H543.32
pituitary gland, adult.CNhs10493.21-1G850.73
pituitary gland, embryo E12.CNhs11018.346-16E675.63
pituitary gland, embryo E13.CNhs11009.370-44C764.55
pituitary gland, embryo E14.CNhs11037.398-44A570.73
pituitary gland, embryo E15.CNhs10592.427-16B989.73
pituitary gland, embryo E16.CNhs11036.449-43F678.48
pituitary gland, embryo E17.CNhs11039.1265-44F571.74
pituitary gland, neonate N00.CNhs11190.1308-22E947.19
placenta, adult pregnant day10.CNhs10472.539-13I784.72
placenta, adult pregnant day17.CNhs10464.577-18G3100.20
prostate, adult.CNhs10470.859-1F869.25
skin, adult.CNhs10492.30-1C3107.34
skin, neonate N00.CNhs11124.650-25G486.38
skin, neonate N03.CNhs11215.662-22H374.73
skin, neonate N06.CNhs11097.693-20I560.04
skin, neonate N10.CNhs11108.762-6C472.88
small intestine, neonate N16.CNhs11114.790-21I164.42
spinal cord, adult.CNhs10505.24-13C9109.03
spleen, adult.CNhs10465.25-2G236.57
spleen, embryo E16.CNhs11035.461-43C152.84
spleen, embryo E18.CNhs11011.1271-21F243.71
spleen, neonate N10.CNhs11116.752-24D124.11
spleen, neonate N20.CNhs11112.824-19H127.75
spleen, neonate N25.CNhs11099.1354-25G327.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C623.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.23
stomach, adult.CNhs10503.33-1H627.69
stomach, embryo E12.CNhs10588.356-43E377.03
stomach, embryo E15.CNhs10603.1252-16G870.15
stomach, embryo E16.CNhs11022.459-17D458.54
stomach, embryo E17.CNhs11006.1035-18D553.11
stomach, embryo E18.CNhs10999.1286-20C650.66
stomach, neonate N03.CNhs11193.1340-24B854.75
stomach, neonate N07.CNhs11210.718-18A964.30
stomach, neonate N25.CNhs11104.1355-25E447.12
stomach, neonate N30.CNhs11134.1386-42I152.49
submandibular gland, adult.CNhs10469.59-29C162.76
testis, adult.CNhs10504.57-7G531.00
testis, embryo E13.CNhs11031.389-23F569.23
testis, embryo E15.CNhs11034.443-27C554.93
testis, embryo E16.CNhs11033.470-26G561.45
testis, embryo E17.CNhs11029.486-18I557.99
testis, embryo E18.CNhs11027.503-18G561.33
testis, neonate N00.CNhs11189.1300-22B766.66
testis, neonate N07.CNhs11222.726-26I451.04
testis, neonate N10.CNhs11204.763-44D948.24
testis, neonate N20.CNhs11110.839-18H330.92
testis, neonate N30.CNhs11130.1391-42E237.73
thymus, adult.CNhs10471.38-12B586.90
thymus, embryo E14.CNhs11041.402-44I438.92
thymus, embryo E15.CNhs11005.430-45I239.95
thymus, embryo E16.CNhs11002.456-26C538.33
thymus, embryo E17.CNhs10581.478-18C165.52
thymus, embryo E18.CNhs10595.1273-19G466.16
thymus, neonate N02.CNhs11181.1541-43F858.41
thymus, neonate N03.CNhs11137.2104-43C757.75
thymus, neonate N06.CNhs11197.681-26C464.82
thymus, neonate N07.CNhs11211.713-19D368.28
thymus, neonate N10.CNhs11194.748-24E471.28
thymus, neonate N20.CNhs11186.820-7A291.81
thymus, neonate N25.CNhs11125.1362-25G772.06
thymus, neonate N30.CNhs11132.1393-42G275.74
tongue, adult.CNhs10499.32-1B476.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H344.84
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F740.91
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G548.69
urinary bladder, adult.CNhs10481.879-12E474.57
uterus, adult pregnant day19.CNhs10497.590-15F577.51
uterus, adult.CNhs10509.92-27E587.36
vagina, adult.CNhs10502.89-27D574.39
vesicular gland, adult.CNhs10491.51-27F859.69
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1134.41
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2125.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3122.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D792.80
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A464.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A573.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A660.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A758.09
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A855.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A955.92
whole body, embryo E11.CNhs11014.324-5I889.46
whole body, embryo E12.CNhs10587.857-27C9158.81
whole body, embryo E13.CNhs10512.372-23H282.81
whole body, embryo E14.5.CNhs10578.420-27D291.89
whole body, embryo E14.CNhs10519.395-14B179.86
whole body, embryo E16.CNhs10514.453-14F294.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G583.79
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G591.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G584.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G590.21
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G578.33
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G583.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G576.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G589.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G591.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G583.83
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G579.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G577.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G583.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G577.43
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G571.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G574.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G571.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G572.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G576.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G574.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G575.92
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G573.40
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G572.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G583.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G585.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G579.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G561.79
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G573.44
whole body, embryo E17.5.CNhs10513.490-9F977.55
whole body, embryo E17.CNhs10517.475-3I5104.92
whole body, embryo E18.CNhs10516.493-3B371.12
whole body, neonate N00.CNhs10525.657-19C280.36
whole body, neonate N01.CNhs10576.659-23C680.53
whole body, neonate N06.CNhs10515.692-21D173.02
whole body, neonate N10.CNhs10518.761-6B468.63





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:38089567..38089622,%2B&oldid=790106"