Personal tools

FFCP PHASE1:Mm9::chr16:38089157..38089189,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr16:38089157..38089189,+
|short_description=p3@Gsk3b
|description=CAGE_peak_3_at_Gsk3b_5end
|association_with_transcript=70bp_to_ENSMUST00000023507,NM_019827,uc007zen.1_5end
|EntrezGene=56637
|EntrezGene=56637
|HGNC=
|HGNC=
|UniProt=Q9WV60,Q5KU03
|UniProt=Q9WV60,Q5KU03
|association_with_transcript=70bp_to_ENSMUST00000023507,NM_019827,uc007zen.1_5end
|description=CAGE_peak_3_at_Gsk3b_5end
|id=chr16:38089157..38089189,+
|ontology_enrichment_disease=
|phase1_expression=2.88267924788629,3.83872948403297,2.27499619694768,4.23449895829562,4.50806156951712,2.68606835059024,2.10251376535973,3.09895976259783,3.09735188733667,2.80877431586392,1.71217968225505,1.7549874978974,2.56801094896809,3.3219752919219,1.99865857089398,1.01237633694913,1.39912375625629,1.10411757875383,2.33094537129756,4.66828616977833,1.53077922271926,0.794327609607082,1.56719873483361,2.87986361028132,3.21172993494038,1.14846392823004,0.86152399231815,3.01659725760245,1.71021077510736,2.77233142735924,1.99557459589774,1.90509202037889,0.61506478758457,0,1.73310971850765,1.99481574430191,1.63335485009895,3.34825304589526,0,3.66466620781659,1.17646297606203,2.04913645487534,5.82612423637384,1.25896817975577,1.4192770370732,1.83546752161682,0.782391344348039,1.09012578190223,0.878744730937887,0.777719596297134,2.2397827460058,1.43752564364972,2.51673909086605,2.90144856804538,2.01656279485478,1.80081605225163,1.43266719969378,0.515672092277442,4.45096213891115,2.64495489636016,3.80298842103708,1.0165335962074,0,0.449949858640699,0,0.7104801149461,0,1.53687322128622,5.28817022773236,4.45519596494579,3.99617426567626,0.285650984403804,1.54607978666129,7.34944795289724,6.22995561618536,4.5960939330501,2.20231761998777,2.17068474744819,1.53606533256243,4.74790635828698,3.84248103130121,5.2091337055676,1.95428099300967,1.12552522006336,2.29197371665215,3.83017161115768,2.84743361598206,2.60959224155421,2.49896437999507,2.94729084416464,1.44932244350839,0,0.679971333707751,2.69851595818909,0.649776417447669,1.79210754838934,1.96622188184453,2.04516387093669,2.33807404142582,0.35333957451034,2.53518155598025,0,0,0,1.08245520505607,0.253359865475099,1.01104889002957,1.25602267690966,0.517875767294343,0.890652834388949,2.77576522825817,2.43572382649713,2.7673859670727,2.11011696773672,1.52865319276416,1.88499886994513,2.22475470960936,1.3013942122792,0,3.558870698843,4.85851340612866,2.90925151881133,1.86391761218122,1.46390398505774,1.46612694769419,3.57639877292028,2.39630249011841,0,2.54140454146129,2.09706895166752,3.20250421973039,3.8952849154988,0.695297280769106,2.30143911597297,3.53239675751252,2.27137768294861,1.73126918545538,2.73695335342205,2.0217820674694,2.73574412652416,5.33493816147085,1.37941262660084,6.12211241338187,4.52114453507145,4.89862793889561,7.30248205623644,8.4331552103756,3.10444044886819,7.76044774558232,3.78212160335639,4.39877810409872,2.41115305670332,2.22437799380478,4.179025998266,3.49829631893504,3.38358253591438,0,1.80143534980301,1.42081749697796,2.89976081549703,4.22146907965973,2.70093092191522,2.60419209143731,1.96764231747404,2.00547246753592,2.09280550275367,2.95100741539581,0.817357396570186,1.15191894939436,2.62667942526552,2.02672023864639,2.19299981137998,1.09775057645525,1.74468344388483,1.47202963994889,2.26390147234426,4.95628174475697,2.64450566663544,4.69234151177515,2.32236671860439,3.60828891701861,2.01683524623343,4.00280478920767,1.71203063501303,1.89811624617805,2.79988223030818,3.01602250560323,2.78539060857611,2.14460495831032,7.19055526923377,3.45820879799511,2.78797782556114,3.41402221715547,3.88444942873078,5.63538678365402,3.05476991767971,2.52138233317913,1.47285221769669,2.52946148497029,1.47610147979602,1.41298855057237,1.1105744752962,2.07516838961004,3.33690211432188,4.32429789249047,3.14806957338795,3.44862206360455,2.41177159752417,2.5462585178142,4.31544206176216,1.62135226775035,0.823684239564244,4.31304619582064,1.86070473834252,0.936113019343682,1.01031551178845,2.33216637578486,1.92977408545347,2.58654466233247,1.89491411770485,2.77040459951444,3.22515662972857,1.87752198630802,3.51763140627813,4.28478553594825,2.92700471786698,3.4679731703362,3.98636441367795,2.39182152986231,1.96635977658886,1.89953480052485,2.16973587872267,1.50791283939272,1.08781136763742,1.47529281905711,1.93155722413313,2.88991061978026,1.99259867206745,1.14754461763673,1.76729649043061,2.83957397474631,1.95219372148319,6.67812532971677,3.58453196928828,6.01556420022464,4.81230102341015,4.45291771842384,5.26060544240361,6.32460444714438,2.57057053137446,1.56134093729095,3.73937767701236,2.44330439030364,1.81467135269789,1.32745138339963,4.37005145078967,2.72091201268276,2.26326095707078,2.36241514304618,3.68922177532713,2.84271122485043,2.18120237686503,2.85197902707777,2.52829406348653,1.05418608574999,0,4.76615448055303,6.84232157318979,3.36332577835162,4.07240366560025,3.90148514013002,2.14042581122485,3.1264313914403,1.2178597964584,2.3467170806371,1.48282449604674,0.661585194164886,2.14352128823924,3.71368181400583,4.644095219468,2.626191568069,4.26766339337159,1.7488850197791,2.78137953015765,1.36696704638282,2.27025554759545,1.29636169158798,4.33247451110789,3.69074414846768,3.43167259809784,3.56954702987096,1.6794174278839,2.62579950228405,0.954670618015114,5.21954389408873,2.23651413839534,3.67218158794124,3.97267762427491,4.36725127492355,2.83215127408124,2.97552440611209,2.35580347785627,2.46268449254406,0.621339313086926,0.56369293868419,3.28936401296753,2.97825282822776,3.11121901350476,2.58319646955462,3.21016638432478,2.69921648885234,1.95306577265925,3.46035836604846,2.17425708743405,2.01621004380506,8.53230025696081,1.21635129174099,3.18403967210964,2.33857481360031,5.37080087002444,5.16571522431289,6.85114062263822,6.4983391956814,9.28891339522958,8.61136915201498,8.87270429204197,9.45341443175598,6.44619338990207,7.24636793525727,1.81384306892169,0.887943813496259,0.448569283047378,0.671538465456314,2.31827512838629,3.75364950902364,4.2124873581471,3.42989406526505,0,1.6942555278512,0.920650473014354,2.86447756719698,0.68741272937475,2.74033007908257,0,1.35004500046361,1.80128481289688,0.906284817968409,1.03552062350364,7.47268902606072,4.78829848081237,4.09760653809922,2.91728060481953,2.93458427679175,1.47074806760011,2.22246727801615,2.26638562962784,2.56735367673452,2.52697211763797,2.78827229879264,3.58390048633545,2.24739617927718,2.30490548657529,1.49332219284595,0.952587382566147,2.43357084484197,1.73618298417335,1.64834360321323,2.06078488188156,3.08582327146874,3.19456451086807,1.90748951957857,3.34296758254356,3.01150017329058,1.69229215783353,1.64635175585495,2.63069711437843,2.30866993537965,1.68342681497322,1.66089025373844,2.65962102414021,1.22769312950907,2.01417893541756,2.3148793317737,3.74715866906919,2.57324769289949,1.71896843238639,1.72159498861959,2.42650561031467,3.01428186306548
|phase1_expression=2.88267924788629,3.83872948403297,2.27499619694768,4.23449895829562,4.50806156951712,2.68606835059024,2.10251376535973,3.09895976259783,3.09735188733667,2.80877431586392,1.71217968225505,1.7549874978974,2.56801094896809,3.3219752919219,1.99865857089398,1.01237633694913,1.39912375625629,1.10411757875383,2.33094537129756,4.66828616977833,1.53077922271926,0.794327609607082,1.56719873483361,2.87986361028132,3.21172993494038,1.14846392823004,0.86152399231815,3.01659725760245,1.71021077510736,2.77233142735924,1.99557459589774,1.90509202037889,0.61506478758457,0,1.73310971850765,1.99481574430191,1.63335485009895,3.34825304589526,0,3.66466620781659,1.17646297606203,2.04913645487534,5.82612423637384,1.25896817975577,1.4192770370732,1.83546752161682,0.782391344348039,1.09012578190223,0.878744730937887,0.777719596297134,2.2397827460058,1.43752564364972,2.51673909086605,2.90144856804538,2.01656279485478,1.80081605225163,1.43266719969378,0.515672092277442,4.45096213891115,2.64495489636016,3.80298842103708,1.0165335962074,0,0.449949858640699,0,0.7104801149461,0,1.53687322128622,5.28817022773236,4.45519596494579,3.99617426567626,0.285650984403804,1.54607978666129,7.34944795289724,6.22995561618536,4.5960939330501,2.20231761998777,2.17068474744819,1.53606533256243,4.74790635828698,3.84248103130121,5.2091337055676,1.95428099300967,1.12552522006336,2.29197371665215,3.83017161115768,2.84743361598206,2.60959224155421,2.49896437999507,2.94729084416464,1.44932244350839,0,0.679971333707751,2.69851595818909,0.649776417447669,1.79210754838934,1.96622188184453,2.04516387093669,2.33807404142582,0.35333957451034,2.53518155598025,0,0,0,1.08245520505607,0.253359865475099,1.01104889002957,1.25602267690966,0.517875767294343,0.890652834388949,2.77576522825817,2.43572382649713,2.7673859670727,2.11011696773672,1.52865319276416,1.88499886994513,2.22475470960936,1.3013942122792,0,3.558870698843,4.85851340612866,2.90925151881133,1.86391761218122,1.46390398505774,1.46612694769419,3.57639877292028,2.39630249011841,0,2.54140454146129,2.09706895166752,3.20250421973039,3.8952849154988,0.695297280769106,2.30143911597297,3.53239675751252,2.27137768294861,1.73126918545538,2.73695335342205,2.0217820674694,2.73574412652416,5.33493816147085,1.37941262660084,6.12211241338187,4.52114453507145,4.89862793889561,7.30248205623644,8.4331552103756,3.10444044886819,7.76044774558232,3.78212160335639,4.39877810409872,2.41115305670332,2.22437799380478,4.179025998266,3.49829631893504,3.38358253591438,0,1.80143534980301,1.42081749697796,2.89976081549703,4.22146907965973,2.70093092191522,2.60419209143731,1.96764231747404,2.00547246753592,2.09280550275367,2.95100741539581,0.817357396570186,1.15191894939436,2.62667942526552,2.02672023864639,2.19299981137998,1.09775057645525,1.74468344388483,1.47202963994889,2.26390147234426,4.95628174475697,2.64450566663544,4.69234151177515,2.32236671860439,3.60828891701861,2.01683524623343,4.00280478920767,1.71203063501303,1.89811624617805,2.79988223030818,3.01602250560323,2.78539060857611,2.14460495831032,7.19055526923377,3.45820879799511,2.78797782556114,3.41402221715547,3.88444942873078,5.63538678365402,3.05476991767971,2.52138233317913,1.47285221769669,2.52946148497029,1.47610147979602,1.41298855057237,1.1105744752962,2.07516838961004,3.33690211432188,4.32429789249047,3.14806957338795,3.44862206360455,2.41177159752417,2.5462585178142,4.31544206176216,1.62135226775035,0.823684239564244,4.31304619582064,1.86070473834252,0.936113019343682,1.01031551178845,2.33216637578486,1.92977408545347,2.58654466233247,1.89491411770485,2.77040459951444,3.22515662972857,1.87752198630802,3.51763140627813,4.28478553594825,2.92700471786698,3.4679731703362,3.98636441367795,2.39182152986231,1.96635977658886,1.89953480052485,2.16973587872267,1.50791283939272,1.08781136763742,1.47529281905711,1.93155722413313,2.88991061978026,1.99259867206745,1.14754461763673,1.76729649043061,2.83957397474631,1.95219372148319,6.67812532971677,3.58453196928828,6.01556420022464,4.81230102341015,4.45291771842384,5.26060544240361,6.32460444714438,2.57057053137446,1.56134093729095,3.73937767701236,2.44330439030364,1.81467135269789,1.32745138339963,4.37005145078967,2.72091201268276,2.26326095707078,2.36241514304618,3.68922177532713,2.84271122485043,2.18120237686503,2.85197902707777,2.52829406348653,1.05418608574999,0,4.76615448055303,6.84232157318979,3.36332577835162,4.07240366560025,3.90148514013002,2.14042581122485,3.1264313914403,1.2178597964584,2.3467170806371,1.48282449604674,0.661585194164886,2.14352128823924,3.71368181400583,4.644095219468,2.626191568069,4.26766339337159,1.7488850197791,2.78137953015765,1.36696704638282,2.27025554759545,1.29636169158798,4.33247451110789,3.69074414846768,3.43167259809784,3.56954702987096,1.6794174278839,2.62579950228405,0.954670618015114,5.21954389408873,2.23651413839534,3.67218158794124,3.97267762427491,4.36725127492355,2.83215127408124,2.97552440611209,2.35580347785627,2.46268449254406,0.621339313086926,0.56369293868419,3.28936401296753,2.97825282822776,3.11121901350476,2.58319646955462,3.21016638432478,2.69921648885234,1.95306577265925,3.46035836604846,2.17425708743405,2.01621004380506,8.53230025696081,1.21635129174099,3.18403967210964,2.33857481360031,5.37080087002444,5.16571522431289,6.85114062263822,6.4983391956814,9.28891339522958,8.61136915201498,8.87270429204197,9.45341443175598,6.44619338990207,7.24636793525727,1.81384306892169,0.887943813496259,0.448569283047378,0.671538465456314,2.31827512838629,3.75364950902364,4.2124873581471,3.42989406526505,0,1.6942555278512,0.920650473014354,2.86447756719698,0.68741272937475,2.74033007908257,0,1.35004500046361,1.80128481289688,0.906284817968409,1.03552062350364,7.47268902606072,4.78829848081237,4.09760653809922,2.91728060481953,2.93458427679175,1.47074806760011,2.22246727801615,2.26638562962784,2.56735367673452,2.52697211763797,2.78827229879264,3.58390048633545,2.24739617927718,2.30490548657529,1.49332219284595,0.952587382566147,2.43357084484197,1.73618298417335,1.64834360321323,2.06078488188156,3.08582327146874,3.19456451086807,1.90748951957857,3.34296758254356,3.01150017329058,1.69229215783353,1.64635175585495,2.63069711437843,2.30866993537965,1.68342681497322,1.66089025373844,2.65962102414021,1.22769312950907,2.01417893541756,2.3148793317737,3.74715866906919,2.57324769289949,1.71896843238639,1.72159498861959,2.42650561031467,3.01428186306548
|short_description=p3@Gsk3b
}}
}}

Revision as of 00:32, 18 April 2012

Short description:p3@Gsk3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gsk3b_5end
Coexpression cluster:NA
Association with transcript: 70bp_to_ENSMUST00000023507, NM_019827, uc007zen.1_5end
EntrezGene:Gsk3b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gsk3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.57
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.29
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.23
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D92.50
Mouse Schwann, donor2.CNhs12573.11746-123F92.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A64.86
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C65.33
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C96.12
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C64.90
eyeball, neonate N01.CNhs11140.1532-43E77.30
eyeball, neonate N02.CNhs11205.1551-44G88.43
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E27.76
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.95
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I62.19
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F83.88
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F82.77
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.52
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F53.13
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G43.71
skin, neonate N03.CNhs11215.662-22H34.64
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C44.27
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A92.98
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G53.21
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B58.53
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F86.85
thymus, neonate N03.CNhs11137.2104-43C76.50
thymus, neonate N06.CNhs11197.681-26C49.29
thymus, neonate N07.CNhs11211.713-19D38.61
thymus, neonate N10.CNhs11194.748-24E48.87
thymus, neonate N20.CNhs11186.820-7A29.45
thymus, neonate N25.CNhs11125.1362-25G76.45
thymus, neonate N30.CNhs11132.1393-42G27.25
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I87.47
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H24.10
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:38089157..38089189,%2B&oldid=790097"