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FFCP PHASE1:Mm9::chr16:33056542..33056581,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:33056542..33056581,+
|short_description=p1@Gm11810,p1@Gm14279,p1@LOC100505045,p1@LOC100505110,p1@Rpl35a-ps7,p1@Rpl35a
|description=CAGE_peak_1_at_Gm11810_5end,CAGE_peak_1_at_Gm14279_5end,CAGE_peak_1_at_LOC100505045_5end,CAGE_peak_1_at_LOC100505110_5end,CAGE_peak_1_at_Rpl35a-ps7_5end,CAGE_peak_1_at_Rpl35a_5end
|association_with_transcript=0bp_to_ENSMUST00000115079,ENSMUST00000133785,NM_001130484,uc007yzw.2_5end
|EntrezGene=100039478,100041154,100046034,100505045,100505110,57808
|EntrezGene=100039478,100041154,100046034,100505045,100505110,57808
|HGNC=
|HGNC=
|UniProt=O55142,Q6ZWX1
|UniProt=O55142,Q6ZWX1
|association_with_transcript=0bp_to_ENSMUST00000115079,ENSMUST00000133785,NM_001130484,uc007yzw.2_5end
|description=CAGE_peak_1_at_Gm11810_5end,CAGE_peak_1_at_Gm14279_5end,CAGE_peak_1_at_LOC100505045_5end,CAGE_peak_1_at_LOC100505110_5end,CAGE_peak_1_at_Rpl35a-ps7_5end,CAGE_peak_1_at_Rpl35a_5end
|id=chr16:33056542..33056581,+
|ontology_enrichment_disease=
|phase1_expression=29.3072390201773,8.02643437570531,13.1949779422965,7.56160528267075,4.50806156951712,18.6345991822198,15.4184342793047,22.4674582788343,43.6445038670167,43.3019373695688,44.1742358021803,43.0769658574817,24.6529051100936,19.6695905442744,18.9872564234928,23.0821804824402,23.0855419782288,23.3442002365096,21.8011949433125,28.434106670468,11.7359740408476,22.6383368738018,24.5527801790599,15.5192650109604,15.5998311125676,21.8208146363708,19.8150518233174,14.8675150553263,12.9215925230334,19.6583501212746,25.0555477040494,21.5910428976275,19.0670084151217,0,35.2398976096555,38.8989070138872,34.300451852078,29.2972141515835,42.1921086042852,34.0290433582969,14.7057872007754,24.589637458504,28.1596004758069,9.81995180209503,10.0363161907319,14.6837401729345,14.8654355426127,20.494364699762,8.78744730937887,11.665793944457,26.4574336871935,8.62515386189829,36.7443907266443,26.8383992544197,24.5348473373999,11.0621557495457,13.4670716771216,12.3761302146586,11.1274053472779,12.6957835025288,14.5781222806421,24.3968063089775,18.6751907183339,19.3478439215501,14.8329954385046,19.8934432184908,17.6764065205859,14.6002956022191,14.8276145601123,24.0310570230409,13.6711224878398,12.8542942981712,11.7060326704355,12.2490799214954,22.715376631322,11.0306254393203,13.2139057199266,9.70423769447427,9.36999852863085,11.0784481693363,16.5592634920361,11.4600941522487,12.0048689570594,12.380777420697,11.0014738399303,8.83885756421003,8.68467252874528,12.3023634244698,23.6265723199534,13.1494514585807,4.34796733052517,6.0229671388697,10.879541339324,19.9690180905992,3.24888208723835,6.72040330646003,13.9039975930434,21.6446509674133,54.5550609666024,28.6205055353376,27.0419365971227,14.115912515575,7.64415719119937,0,37.6694411359513,41.2976580724411,39.4309067111531,13.0169622879728,6.73238497482646,7.71899123137089,19.9508125781056,22.5304453950985,18.9104707749968,19.5939432718409,11.2885158850277,12.4409925416379,9.14621380617183,4.62717942143717,14.153768831198,8.08834249737046,6.40440403535141,16.0008833534623,5.59175283654366,7.02673912827713,6.70229461803056,7.15279754584056,47.2071590553326,86.3859932630507,54.1319167331256,7.48953197024113,2.74500361691176,11.0575829859321,3.82413504423008,4.85859368927628,7.2725815595846,6.32740925964255,17.8218886738054,8.9573018839267,7.07623723614289,6.52369753248069,16.0048144844126,23.6799167566477,12.0641626969584,18.8381022294644,10.3415478710018,10.5053250633577,10.6819965998091,6.46758426847539,9.26942369611222,10.2117283290622,13.3722854364601,10.7405908889512,15.0145514581823,10.7958171621872,13.9931852757402,20.3014952154863,53.3682022358058,46.065275373534,34.9521104256579,11.5990432619881,14.3060896588469,19.0865785148676,8.04932100989715,10.8220327461072,14.8096428371883,10.4640275137684,12.6088498657821,12.6106569756543,13.6584675428189,10.0142153088248,7.29619285912702,8.62579925809461,6.36695334344047,7.64976586934119,6.30869845692382,10.0846520131699,1.65209391491899,7.1401652999157,19.8358072997768,19.5078804362768,11.0826016737,9.07575860805041,8.89512175379481,8.17970192284004,11.3886974770683,11.3642278759568,10.304743560811,7.36138946552258,6.82374304916921,5.39291645192533,11.0230405436094,9.16049856970089,18.7771221943551,20.4504837571415,5.63538678365402,16.2921062276251,16.8738663835834,12.8348550399283,7.96780367765642,5.90440591918409,7.06494275286187,7.65062416315163,10.3758419480502,12.6802280344231,11.7935397067922,14.6160373050155,12.3744674046987,15.4353382241547,15.786802810448,13.5217184601881,18.6455510791291,14.5517548989683,14.3768206527355,10.4199465347181,14.3537329632698,8.84026072814891,10.225652570749,4.82443521363367,7.7596339869974,19.5176154123599,11.0816183980578,21.3878808076737,21.5915028425422,10.3853879613926,14.2826184531608,10.1469496886055,10.8768249433272,10.4088404134924,7.17546458958692,11.1427054006702,8.97961905702657,10.1254341007058,13.5712155545345,14.1415477792864,15.2446924635901,11.0374698521893,6.74312477948726,7.97039468826982,18.688583772941,7.82659874333556,12.304820557234,13.2749173060857,6.67812532971677,7.16906393857656,12.4767257486141,10.7569081699756,6.47697122679831,10.8134667427185,8.30104333687699,5.14114106274891,5.25178315270594,21.1898068364034,17.2660176914791,7.25868541079156,10.619611067197,25.734747432428,23.8835610002153,27.1591314848493,14.7650946440386,18.7535440245796,8.5281336745513,13.8142817201452,18.5378636760055,14.2216541071117,18.9753495434998,16.5016869197099,6.80879211507576,16.5656206508805,16.9459875755408,13.9319072770535,8.15765074754458,19.4422011186257,14.4803138129866,14.9187825066154,8.44818149029357,7.62595455109753,9.2621927183084,8.73897140589844,9.04200789497071,8.38349656501366,9.78853220825719,6.07321329056727,8.45294426226567,5.00648315428376,12.3027034174454,24.147263551697,19.4454253738197,16.0113188453987,10.935538217682,16.9295848172827,29.406268388937,32.8885912960596,31.3713940536042,5.72802370809068,12.1789357528737,10.5726122905961,19.6569720295678,20.9088296014469,12.6650286972783,9.17077555416781,10.579642332843,9.6849698534091,8.55458823725833,4.34937519160848,10.1464728963154,15.9982704267057,27.6315679063353,12.6393272423631,28.2860013416231,24.4986381961628,17.1341568422801,12.8902340995511,11.6393872312539,9.90494895386625,9.79302021276743,6.32022241256356,20.2725215290164,20.3367695186358,19.3582026236915,14.859215740401,11.1261558677508,16.5869720337557,16.2458479892035,13.4285378431036,13.336191164625,13.4098826231998,11.3051141658113,13.7582933545671,15.0771203814224,7.02864189207155,15.0950448294364,35.078117934305,22.6644232091506,7.53439416725543,9.57180624801028,11.721703953105,11.3615240911905,8.02515366456581,3.3885110557024,4.14292712856459,8.02053718815155,8.07709957015332,7.53590771747707,3.7769694869485,2.70009000092722,4.95353323546643,4.98456649882625,3.62432218226274,18.3703605223993,10.3746467084268,12.2928196142977,11.1829089851415,11.947950269795,15.9943852351512,8.44537565646138,10.5077879191836,5.13470735346904,9.34979683526051,8.61829619626815,9.43131706930381,13.2970940607233,10.8842759088278,10.1086425361879,8.57328644309533,10.5454736609819,13.3107362119956,10.714233420886,6.18235464564469,9.25746981440622,14.9079677173843,11.921809497366,9.73820991436601,8.46984423737976,12.0152743206181,9.3293266165114,12.6273461490165,12.9013908153569,5.61142271657738,7.94854621431967,12.1160513321943,10.2307760792422,9.91595783590182,13.5034627686799,8.74337022782811,7.71974307869848,7.95022899978704,11.0947232599929,7.27951683094401,8.34724208233517
|phase1_expression=29.3072390201773,8.02643437570531,13.1949779422965,7.56160528267075,4.50806156951712,18.6345991822198,15.4184342793047,22.4674582788343,43.6445038670167,43.3019373695688,44.1742358021803,43.0769658574817,24.6529051100936,19.6695905442744,18.9872564234928,23.0821804824402,23.0855419782288,23.3442002365096,21.8011949433125,28.434106670468,11.7359740408476,22.6383368738018,24.5527801790599,15.5192650109604,15.5998311125676,21.8208146363708,19.8150518233174,14.8675150553263,12.9215925230334,19.6583501212746,25.0555477040494,21.5910428976275,19.0670084151217,0,35.2398976096555,38.8989070138872,34.300451852078,29.2972141515835,42.1921086042852,34.0290433582969,14.7057872007754,24.589637458504,28.1596004758069,9.81995180209503,10.0363161907319,14.6837401729345,14.8654355426127,20.494364699762,8.78744730937887,11.665793944457,26.4574336871935,8.62515386189829,36.7443907266443,26.8383992544197,24.5348473373999,11.0621557495457,13.4670716771216,12.3761302146586,11.1274053472779,12.6957835025288,14.5781222806421,24.3968063089775,18.6751907183339,19.3478439215501,14.8329954385046,19.8934432184908,17.6764065205859,14.6002956022191,14.8276145601123,24.0310570230409,13.6711224878398,12.8542942981712,11.7060326704355,12.2490799214954,22.715376631322,11.0306254393203,13.2139057199266,9.70423769447427,9.36999852863085,11.0784481693363,16.5592634920361,11.4600941522487,12.0048689570594,12.380777420697,11.0014738399303,8.83885756421003,8.68467252874528,12.3023634244698,23.6265723199534,13.1494514585807,4.34796733052517,6.0229671388697,10.879541339324,19.9690180905992,3.24888208723835,6.72040330646003,13.9039975930434,21.6446509674133,54.5550609666024,28.6205055353376,27.0419365971227,14.115912515575,7.64415719119937,0,37.6694411359513,41.2976580724411,39.4309067111531,13.0169622879728,6.73238497482646,7.71899123137089,19.9508125781056,22.5304453950985,18.9104707749968,19.5939432718409,11.2885158850277,12.4409925416379,9.14621380617183,4.62717942143717,14.153768831198,8.08834249737046,6.40440403535141,16.0008833534623,5.59175283654366,7.02673912827713,6.70229461803056,7.15279754584056,47.2071590553326,86.3859932630507,54.1319167331256,7.48953197024113,2.74500361691176,11.0575829859321,3.82413504423008,4.85859368927628,7.2725815595846,6.32740925964255,17.8218886738054,8.9573018839267,7.07623723614289,6.52369753248069,16.0048144844126,23.6799167566477,12.0641626969584,18.8381022294644,10.3415478710018,10.5053250633577,10.6819965998091,6.46758426847539,9.26942369611222,10.2117283290622,13.3722854364601,10.7405908889512,15.0145514581823,10.7958171621872,13.9931852757402,20.3014952154863,53.3682022358058,46.065275373534,34.9521104256579,11.5990432619881,14.3060896588469,19.0865785148676,8.04932100989715,10.8220327461072,14.8096428371883,10.4640275137684,12.6088498657821,12.6106569756543,13.6584675428189,10.0142153088248,7.29619285912702,8.62579925809461,6.36695334344047,7.64976586934119,6.30869845692382,10.0846520131699,1.65209391491899,7.1401652999157,19.8358072997768,19.5078804362768,11.0826016737,9.07575860805041,8.89512175379481,8.17970192284004,11.3886974770683,11.3642278759568,10.304743560811,7.36138946552258,6.82374304916921,5.39291645192533,11.0230405436094,9.16049856970089,18.7771221943551,20.4504837571415,5.63538678365402,16.2921062276251,16.8738663835834,12.8348550399283,7.96780367765642,5.90440591918409,7.06494275286187,7.65062416315163,10.3758419480502,12.6802280344231,11.7935397067922,14.6160373050155,12.3744674046987,15.4353382241547,15.786802810448,13.5217184601881,18.6455510791291,14.5517548989683,14.3768206527355,10.4199465347181,14.3537329632698,8.84026072814891,10.225652570749,4.82443521363367,7.7596339869974,19.5176154123599,11.0816183980578,21.3878808076737,21.5915028425422,10.3853879613926,14.2826184531608,10.1469496886055,10.8768249433272,10.4088404134924,7.17546458958692,11.1427054006702,8.97961905702657,10.1254341007058,13.5712155545345,14.1415477792864,15.2446924635901,11.0374698521893,6.74312477948726,7.97039468826982,18.688583772941,7.82659874333556,12.304820557234,13.2749173060857,6.67812532971677,7.16906393857656,12.4767257486141,10.7569081699756,6.47697122679831,10.8134667427185,8.30104333687699,5.14114106274891,5.25178315270594,21.1898068364034,17.2660176914791,7.25868541079156,10.619611067197,25.734747432428,23.8835610002153,27.1591314848493,14.7650946440386,18.7535440245796,8.5281336745513,13.8142817201452,18.5378636760055,14.2216541071117,18.9753495434998,16.5016869197099,6.80879211507576,16.5656206508805,16.9459875755408,13.9319072770535,8.15765074754458,19.4422011186257,14.4803138129866,14.9187825066154,8.44818149029357,7.62595455109753,9.2621927183084,8.73897140589844,9.04200789497071,8.38349656501366,9.78853220825719,6.07321329056727,8.45294426226567,5.00648315428376,12.3027034174454,24.147263551697,19.4454253738197,16.0113188453987,10.935538217682,16.9295848172827,29.406268388937,32.8885912960596,31.3713940536042,5.72802370809068,12.1789357528737,10.5726122905961,19.6569720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|short_description=p1@Gm11810,p1@Gm14279,p1@LOC100505045,p1@LOC100505110,p1@Rpl35a-ps7,p1@Rpl35a
}}
}}

Revision as of 00:25, 18 April 2012

Short description:p1@Gm11810, p1@Gm14279, p1@LOC100505045, p1@LOC100505110, p1@Rpl35a-ps7, p1@Rpl35a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gm11810_5end, CAGE_peak_1_at_Gm14279_5end, CAGE_peak_1_at_LOC100505045_5end, CAGE_peak_1_at_LOC100505110_5end, CAGE_peak_1_at_Rpl35a-ps7_5end, CAGE_peak_1_at_Rpl35a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000115079, ENSMUST00000133785, NM_001130484, uc007yzw.2_5end
EntrezGene:100039478,100041154,100046034,100505045,100505110,57808
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gm11810p1@Gm14279p1@LOC100505045p1@LOC100505110p1@Rpl35a-ps7p1@Rpl35a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.56
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.63
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.42
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E743.64
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F243.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E644.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F143.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E424.65
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.67
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A323.08
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A523.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.34
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A421.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.60
GP2+ M cell, pool1.CNhs13228.11845-124H921.82
GP2+ M cell, pool2.CNhs13231.11846-124I119.82
GP2+ M cell, pool3.CNhs13240.11847-124I214.87
Ileum epithelium, pool1.CNhs13199.10252-104B912.92
Ileum epithelium, pool2.CNhs13232.10253-104C119.66
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I321.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G619.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F535.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F638.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F734.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G829.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H142.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H334.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H224.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H428.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.82
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.68
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.87
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C426.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A236.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.84
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.53
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C111.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C311.13
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C624.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C719.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.89
Mouse Microglia, donor1.CNhs12629.11718-123C817.68
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D913.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.72
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.08
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.30
Mouse Schwann, donor1.CNhs12507.11728-123D923.63
Mouse Schwann, donor2.CNhs12573.11746-123F913.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C819.97
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I721.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E354.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I828.62
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G137.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G241.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G339.43
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.02
accessory axillary lymph node, adult.CNhs10475.1063-29H96.73
adrenal gland, adult.CNhs10508.49-24D77.72
adrenal gland, embryo E14.CNhs11038.406-44C519.95
adrenal gland, embryo E16.CNhs11004.1254-43D622.53
adrenal gland, embryo E17.CNhs11043.1263-45I118.91
adrenal gland, embryo E18.CNhs11026.1262-18F519.59
adrenal gland, neonate N00.CNhs11191.1311-23C111.29
adrenal gland, neonate N25.CNhs11223.1377-27I312.44
amnion, adult pregnant day17.5.CNhs10488.583-22A89.15
aorta, adult.CNhs10498.46-23H14.63
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F58.09
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C316.00
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I26.70
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C747.21
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D186.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D454.13
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F111.06
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.82
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.96
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C616.00
eyeball, embryo E14.CNhs10521.399-16E223.68
eyeball, embryo E15.CNhs10593.426-16C912.06
eyeball, embryo E17.CNhs11023.1261-18D418.84
eyeball, neonate N00.CNhs11207.633-15C610.34
eyeball, neonate N01.CNhs11140.1532-43E710.51
eyeball, neonate N02.CNhs11205.1551-44G810.68
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E29.27
forelimb, embryo E12.CNhs10600.359-14H210.21
forelimb, embryo E13.CNhs10589.384-1E213.37
forelimb, embryo E14.CNhs10577.413-26A810.74
forelimb, embryo E15.CNhs11007.437-20E715.01
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B513.99
gonad, embryo E13.CNhs11044.1564-45I620.30
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C853.37
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D246.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D534.95
heart, embryo E11.CNhs10586.331-24E911.60
heart, embryo E12.CNhs11015.353-12F514.31
heart, embryo E13.CNhs11013.376-3I919.09
heart, embryo E14.CNhs10597.403-26D48.05
heart, embryo E15.CNhs11017.431-16C810.82
heart, embryo E16.CNhs11021.457-17C614.81
heart, embryo E17.CNhs11025.479-18E510.46
heart, embryo E18.CNhs11030.1283-20G312.61
heart, neonate N00.CNhs11213.639-21E312.61
heart, neonate N03.CNhs11221.1349-25I213.66
heart, neonate N10.CNhs11118.749-24G110.01
heart, neonate N16.CNhs11209.782-15G17.30
heart, neonate N20.CNhs11127.821-26I68.63
heart, neonate N25.CNhs11196.1351-25D36.37
heart, neonate N30.CNhs11202.1390-42D27.65
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G110.08
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I519.84
intestine, embryo E13.CNhs11010.381-16D519.51
intestine, embryo E15.CNhs10602.976-16D811.08
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D38.90
intestine, embryo E18.CNhs10526.1289-20F78.18
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E911.36
intestine, neonate N06.CNhs11102.688-20B810.30
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E311.02
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I918.78
kidney, embryo E15.CNhs10997.434-16F820.45
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I216.29
kidney, embryo E18.CNhs11001.1288-20C716.87
kidney, neonate N00.CNhs11214.646-21G712.83
kidney, neonate N10.CNhs11206.758-6D57.97
kidney, neonate N20.CNhs11113.832-19I15.90
kidney, neonate N25.CNhs11122.1353-25F37.06
kidney, neonate N30.CNhs11203.1385-42H17.65
liver, adult pregnant day01.CNhs10466.508-5B210.38
liver, embryo E12.CNhs10601.355-15F812.68
liver, embryo E13.CNhs10524.378-3H611.79
liver, embryo E14.CNhs10594.409-16E114.62
liver, embryo E15.CNhs10520.433-16D712.37
liver, embryo E16.CNhs10523.462-17F515.44
liver, embryo E17.CNhs10510.481-18A315.79
liver, embryo E18.CNhs10579.499-43G413.52
liver, neonate N00.CNhs11117.641-24F418.65
liver, neonate N03.CNhs11123.1345-25G214.55
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H210.42
liver, neonate N10.CNhs11115.751-24B914.35
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H110.23
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B17.76
lung, embryo E12.CNhs10522.354-16G219.52
lung, embryo E14.CNhs10604.404-26F811.08
lung, embryo E15.CNhs11020.432-17C521.39
lung, embryo E16.CNhs10998.458-17B621.59
lung, embryo E17.CNhs10605.480-44A610.39
lung, embryo E18.CNhs10583.1287-20I614.28
lung, neonate N00.CNhs11224.640-42C610.15
lung, neonate N06.CNhs11212.683-20E510.88
lung, neonate N07.CNhs11111.715-19A310.41
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A411.14
lung, neonate N25.CNhs11119.1359-25C78.98
lung, neonate N30.CNhs11133.1394-42H210.13
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B615.24
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A37.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.69
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.83
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.17
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.76
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H721.19
ovary, neonate N00.CNhs11217.1299-22I417.27
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F425.73
pancreas, embryo E15.CNhs11042.1556-45F223.88
pancreas, embryo E16.CNhs11003.460-26E527.16
pancreas, embryo E17.CNhs10599.1558-45G314.77
pancreas, embryo E18.CNhs10580.1535-43I718.75
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D818.54
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E616.57
pituitary gland, embryo E13.CNhs11009.370-44C716.95
pituitary gland, embryo E14.CNhs11037.398-44A513.93
pituitary gland, embryo E15.CNhs10592.427-16B98.16
pituitary gland, embryo E16.CNhs11036.449-43F619.44
pituitary gland, embryo E17.CNhs11039.1265-44F514.48
pituitary gland, neonate N00.CNhs11190.1308-22E914.92
placenta, adult pregnant day10.CNhs10472.539-13I78.45
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G49.04
skin, neonate N03.CNhs11215.662-22H38.38
skin, neonate N06.CNhs11097.693-20I59.79
skin, neonate N10.CNhs11108.762-6C46.07
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G212.30
spleen, embryo E16.CNhs11035.461-43C124.15
spleen, embryo E18.CNhs11011.1271-21F219.45
spleen, neonate N10.CNhs11116.752-24D116.01
spleen, neonate N20.CNhs11112.824-19H110.94
spleen, neonate N25.CNhs11099.1354-25G316.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C629.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D331.37
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E312.18
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D419.66
stomach, embryo E17.CNhs11006.1035-18D520.91
stomach, embryo E18.CNhs10999.1286-20C612.67
stomach, neonate N03.CNhs11193.1340-24B89.17
stomach, neonate N07.CNhs11210.718-18A910.58
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I18.55
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F516.00
testis, embryo E15.CNhs11034.443-27C527.63
testis, embryo E16.CNhs11033.470-26G512.64
testis, embryo E17.CNhs11029.486-18I528.29
testis, embryo E18.CNhs11027.503-18G524.50
testis, neonate N00.CNhs11189.1300-22B717.13
testis, neonate N07.CNhs11222.726-26I412.89
testis, neonate N10.CNhs11204.763-44D911.64
testis, neonate N20.CNhs11110.839-18H39.90
testis, neonate N30.CNhs11130.1391-42E29.79
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I420.27
thymus, embryo E15.CNhs11005.430-45I220.34
thymus, embryo E16.CNhs11002.456-26C519.36
thymus, embryo E17.CNhs10581.478-18C114.86
thymus, embryo E18.CNhs10595.1273-19G411.13
thymus, neonate N02.CNhs11181.1541-43F816.59
thymus, neonate N03.CNhs11137.2104-43C716.25
thymus, neonate N06.CNhs11197.681-26C413.43
thymus, neonate N07.CNhs11211.713-19D313.34
thymus, neonate N10.CNhs11194.748-24E413.41
thymus, neonate N20.CNhs11186.820-7A211.31
thymus, neonate N25.CNhs11125.1362-25G713.76
thymus, neonate N30.CNhs11132.1393-42G215.08
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F735.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G522.66
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F59.57
uterus, adult.CNhs10509.92-27E511.72
vagina, adult.CNhs10502.89-27D511.36
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I818.37
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B111.95
whole body, embryo E16.CNhs10514.453-14F215.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.92
whole body, embryo E17.5.CNhs10513.490-9F913.50
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C611.09
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B48.35





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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