Personal tools

FFCP PHASE1:Mm9::chr14:27928033..27928080,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr14:27928033..27928080,+
|short_description=p3@Arhgef3
|description=CAGE_peak_3_at_Arhgef3_5end
|association_with_transcript=-4bp_to_uc007sto.1_5end
|EntrezGene=71704
|EntrezGene=71704
|HGNC=
|HGNC=
|UniProt=Q91X46
|UniProt=Q91X46
|association_with_transcript=-4bp_to_uc007sto.1_5end
|description=CAGE_peak_3_at_Arhgef3_5end
|id=chr14:27928033..27928080,+
|ontology_enrichment_disease=
|phase1_expression=1.92178616525753,21.9854506812797,22.7499619694768,8.16653370528441,12.0214975187123,11.0800319461847,9.81173090501208,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0.42438965179803,5.6128571499706,0,0,6.71968175732308,7.57050627521661,14.3557991028755,16.3689558540448,14.4365725899546,9.88121781173144,6.04872311423834,8.86922042621219,0,0,0,0.577703239502549,1.66234645358492,0.612508068787107,0,0,0,0,0,0,3.77690453926732,4.56196190487815,4.77221555620372,0,0.65407546914134,0.439372365468944,0,0.419959264876088,1.43752564364972,0,0,0,6.17422646486273,14.8997388768154,10.3134418455488,0.202316460859598,1.05798195854407,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0,0.299600110518405,0,0.207379224616955,0,0.210324961351382,1.99955689082663,1.98781686856452,0.857435594504678,0.191690942036473,1.83843757322004,0,0.383062014255563,0.307213066512487,0,0.182975287204819,0.52091337055676,0,0,0.45839474333043,4.12480019663135,3.13217697758026,0.559198337475902,1.21161909333094,1.20914496170857,30.7256358023778,4.30211938490693,11.5595126730318,4.85732872474035,6.49776417447669,9.85659151614138,3.7919993435573,3.06774580640504,3.37721805983729,3.18005617059306,3.09855523508697,5.13305909657271,2.54805239706646,0,2.59789249213457,2.78695852022608,2.02209778005913,6.50848114398642,7.76813650941515,14.1020032111584,2.77576522825817,7.00270600117925,7.84092690670599,7.68685466818375,14.4634109776917,10.8073268543521,15.8204779349999,8.96516012903452,3.5384422077995,5.66183974815932,2.65009822152472,0.484875253135222,13.0474232852686,0.292780797011547,0.628340120440365,8.17462576667492,0.359445373517761,1.19980546198682,0.127070227073065,0.599162557619291,0,1.38219787324151,0.695297280769106,0.255715457330331,0.20778804455956,1.62241263067758,10.1839363850316,3.73220911830279,4.29628689337247,2.52530227063769,0.390361328888111,0.459804208866946,1.62055916824814,2.41127708537144,2.85753296435577,2.8185018462667,3.46696380870997,2.58703370739016,0.646703978798527,1.70195472151037,3.16712023495108,2.6303487891309,3.89266148915837,4.87553033131033,6.58502836505419,3.98068533636986,0.702213187313235,0.257347907114715,0.284163499395593,4.55676699578104,4.45599513964083,3.6012412292203,5.68187365404505,7.67380503814875,6.01641740260775,8.60375595576509,8.85302224618743,10.0418194435766,8.22799249567402,9.02921052435024,11.5117709555115,11.5497990066013,10.9775057645525,11.541752013392,0.630869845692382,2.05809224758569,14.5384264512871,4.7601101999438,1.49301775374664,2.09013004674395,4.12375876230699,4.23535401709019,3.11329261382818,4.94586627892654,7.11793592316767,4.77626968699632,2.76468729680296,4.17808591286417,4.67913809085888,8.98819408654222,5.61958929674205,9.75792238946399,0.948339504765408,2.05647322697512,1.1270773567308,3.25842124552503,2.32742984601151,3.7873342740772,6.38689024954999,12.6944727262458,17.583857518234,14.9310568345379,9.19003143970162,0.166845105716094,0.196558995113203,0,0.608580364165509,1.20588579876208,1.78238096246994,2.30156909960649,2.7562988551756,1.37280706594041,10.0637744569148,5.95425516269605,9.04909252032226,10.3557339958316,9.14926808961752,7.23665282045051,12.3784637411625,0.568474235311454,0.162964976442026,1.52770577197669,3.52035372432753,5.86271901046355,9.99783291721258,10.1469496886055,11.0344600874334,6.2010113101657,8.13219320153184,13.2729284919748,10.8791538575514,10.4147322178688,0,0,8.85175691434265,5.24279817978992,0.160550589987792,1.40654023910644,1.3114795630134,6.81671503451807,6.62567260774139,10.9322848403059,17.2338718186239,4.54040716109849,4.23317480756549,6.51076020814315,8.09621403349789,8.18316402151673,7.90575555893047,0.642642632843614,11.4971469018698,3.02711526234334,7.32991317091092,8.08353602565424,3.98235415019888,2.42780636154981,2.41858845571801,6.41257271170054,4.13422650033082,7.99331384654211,7.75284879504663,7.99774204850512,6.41695281092498,4.74055136903724,9.48767477174989,5.15677716240934,13.6175842301515,0.18006109403131,0.388076051348264,1.07168517515796,1.77340233642274,1.96205699362278,5.92376474167636,6.39376393140658,1.40803024838226,0.847328283455281,23.155481795771,9.56340267060584,9.84933002845024,7.84068024066026,8.47543642422269,7.71462228801788,4.08073171281791,2.03967832211561,0.683483523191411,1.44470807574256,1.29636169158798,0.565105371014073,0.683471138605126,1.14389086603261,0.679913719975421,1.11961161858926,0.138199973804424,5.72802370809068,0.790839983952838,4.06638934253697,4.86024033698106,8.57262013659322,6.98760203987768,6.20375993370175,7.3561575595549,7.0674104335688,13.4799572223465,4.34937519160848,3.38215763210514,6.13017838780313,5.29467169462712,15.9449974442119,15.4991788173277,22.9780330667458,24.0582339223796,28.3845558959811,32.6112561163961,10.1465330746923,6.04863013141517,1.26404448251271,1.01362607645082,1.33524244314275,1.94881234466693,0.716106782669926,0.79472541912506,1.20195449519969,0.295379054349154,1.51449674922221,0.533447646584999,1.00826185136841,1.8516997340553,1.25075394132428,0.584384510907845,17.0047787711409,3.99574716073316,0.448569283047378,2.18250001273302,11.3981860478992,3.37828455812128,7.14291334642334,8.57473516316263,11.5361583928134,0.564751842617067,0.920650473014354,1.71868654031819,1.03111909406213,0,0,0,0,0,0.51776031175182,0.31136204275253,0.798049746802062,1.19513524027894,3.8897074730927,1.46729213839588,2.20612210140017,4.22268782823069,5.35691148821125,6.09746498224449,7.07552192938633,5.57654459758527,5.09291121742406,4.49479235855436,5.25006249719928,5.74354689556133,4.28664322154766,5.79421629724277,5.20854895252004,4.12085900803307,5.7407578852415,3.77156177623957,6.56660482789549,3.33810665926249,6.1045494985578,5.36423468367385,5.58456412085065,5.3049112133104,4.20911538300549,5.16055632614275,4.48913817326191,5.45721083371201,4.13718825977367,4.09231043169689,5.57772628269478,5.40138510747196,3.2475375131933,3.04111090979031,6.23126056740065,8.99055160723564,6.39715115446595,3.94175320554716
|phase1_expression=1.92178616525753,21.9854506812797,22.7499619694768,8.16653370528441,12.0214975187123,11.0800319461847,9.81173090501208,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.137114433605739,0.42438965179803,5.6128571499706,0,0,6.71968175732308,7.57050627521661,14.3557991028755,16.3689558540448,14.4365725899546,9.88121781173144,6.04872311423834,8.86922042621219,0,0,0,0.577703239502549,1.66234645358492,0.612508068787107,0,0,0,0,0,0,3.77690453926732,4.56196190487815,4.77221555620372,0,0.65407546914134,0.439372365468944,0,0.419959264876088,1.43752564364972,0,0,0,6.17422646486273,14.8997388768154,10.3134418455488,0.202316460859598,1.05798195854407,0,0.338844532069132,0,0.449949858640699,1.97773272513395,0,0.299600110518405,0,0.207379224616955,0,0.210324961351382,1.99955689082663,1.98781686856452,0.857435594504678,0.191690942036473,1.83843757322004,0,0.383062014255563,0.307213066512487,0,0.182975287204819,0.52091337055676,0,0,0.45839474333043,4.12480019663135,3.13217697758026,0.559198337475902,1.21161909333094,1.20914496170857,30.7256358023778,4.30211938490693,11.5595126730318,4.85732872474035,6.49776417447669,9.85659151614138,3.7919993435573,3.06774580640504,3.37721805983729,3.18005617059306,3.09855523508697,5.13305909657271,2.54805239706646,0,2.59789249213457,2.78695852022608,2.02209778005913,6.50848114398642,7.76813650941515,14.1020032111584,2.77576522825817,7.00270600117925,7.84092690670599,7.68685466818375,14.4634109776917,10.8073268543521,15.8204779349999,8.96516012903452,3.5384422077995,5.66183974815932,2.65009822152472,0.484875253135222,13.0474232852686,0.292780797011547,0.628340120440365,8.17462576667492,0.359445373517761,1.19980546198682,0.127070227073065,0.599162557619291,0,1.38219787324151,0.695297280769106,0.255715457330331,0.20778804455956,1.62241263067758,10.1839363850316,3.73220911830279,4.29628689337247,2.52530227063769,0.390361328888111,0.459804208866946,1.62055916824814,2.41127708537144,2.85753296435577,2.8185018462667,3.46696380870997,2.58703370739016,0.646703978798527,1.70195472151037,3.16712023495108,2.6303487891309,3.89266148915837,4.87553033131033,6.58502836505419,3.98068533636986,0.702213187313235,0.257347907114715,0.284163499395593,4.55676699578104,4.45599513964083,3.6012412292203,5.68187365404505,7.67380503814875,6.01641740260775,8.60375595576509,8.85302224618743,10.0418194435766,8.22799249567402,9.02921052435024,11.5117709555115,11.5497990066013,10.9775057645525,11.541752013392,0.630869845692382,2.05809224758569,14.5384264512871,4.7601101999438,1.49301775374664,2.09013004674395,4.12375876230699,4.23535401709019,3.11329261382818,4.94586627892654,7.11793592316767,4.77626968699632,2.76468729680296,4.17808591286417,4.67913809085888,8.98819408654222,5.61958929674205,9.75792238946399,0.948339504765408,2.05647322697512,1.1270773567308,3.25842124552503,2.32742984601151,3.7873342740772,6.38689024954999,12.6944727262458,17.583857518234,14.9310568345379,9.19003143970162,0.166845105716094,0.196558995113203,0,0.608580364165509,1.20588579876208,1.78238096246994,2.30156909960649,2.7562988551756,1.37280706594041,10.0637744569148,5.95425516269605,9.04909252032226,10.3557339958316,9.14926808961752,7.23665282045051,12.3784637411625,0.568474235311454,0.162964976442026,1.52770577197669,3.52035372432753,5.86271901046355,9.99783291721258,10.1469496886055,11.0344600874334,6.2010113101657,8.13219320153184,13.2729284919748,10.8791538575514,10.4147322178688,0,0,8.85175691434265,5.24279817978992,0.160550589987792,1.40654023910644,1.3114795630134,6.81671503451807,6.62567260774139,10.9322848403059,17.2338718186239,4.54040716109849,4.23317480756549,6.51076020814315,8.09621403349789,8.18316402151673,7.90575555893047,0.642642632843614,11.4971469018698,3.02711526234334,7.32991317091092,8.08353602565424,3.98235415019888,2.42780636154981,2.41858845571801,6.41257271170054,4.13422650033082,7.99331384654211,7.75284879504663,7.99774204850512,6.41695281092498,4.74055136903724,9.48767477174989,5.15677716240934,13.6175842301515,0.18006109403131,0.388076051348264,1.07168517515796,1.77340233642274,1.96205699362278,5.92376474167636,6.39376393140658,1.40803024838226,0.847328283455281,23.155481795771,9.56340267060584,9.84933002845024,7.84068024066026,8.47543642422269,7.71462228801788,4.08073171281791,2.03967832211561,0.683483523191411,1.44470807574256,1.29636169158798,0.565105371014073,0.683471138605126,1.14389086603261,0.679913719975421,1.11961161858926,0.138199973804424,5.72802370809068,0.790839983952838,4.06638934253697,4.86024033698106,8.57262013659322,6.98760203987768,6.20375993370175,7.3561575595549,7.0674104335688,13.4799572223465,4.34937519160848,3.38215763210514,6.13017838780313,5.29467169462712,15.9449974442119,15.4991788173277,22.9780330667458,24.0582339223796,28.3845558959811,32.6112561163961,10.1465330746923,6.04863013141517,1.26404448251271,1.01362607645082,1.33524244314275,1.94881234466693,0.716106782669926,0.79472541912506,1.20195449519969,0.295379054349154,1.51449674922221,0.533447646584999,1.00826185136841,1.8516997340553,1.25075394132428,0.584384510907845,17.0047787711409,3.99574716073316,0.448569283047378,2.18250001273302,11.3981860478992,3.37828455812128,7.14291334642334,8.57473516316263,11.5361583928134,0.564751842617067,0.920650473014354,1.71868654031819,1.03111909406213,0,0,0,0,0,0.51776031175182,0.31136204275253,0.798049746802062,1.19513524027894,3.8897074730927,1.46729213839588,2.20612210140017,4.22268782823069,5.35691148821125,6.09746498224449,7.07552192938633,5.57654459758527,5.09291121742406,4.49479235855436,5.25006249719928,5.74354689556133,4.28664322154766,5.79421629724277,5.20854895252004,4.12085900803307,5.7407578852415,3.77156177623957,6.56660482789549,3.33810665926249,6.1045494985578,5.36423468367385,5.58456412085065,5.3049112133104,4.20911538300549,5.16055632614275,4.48913817326191,5.45721083371201,4.13718825977367,4.09231043169689,5.57772628269478,5.40138510747196,3.2475375131933,3.04111090979031,6.23126056740065,8.99055160723564,6.39715115446595,3.94175320554716
|short_description=p3@Arhgef3
}}
}}

Revision as of 21:06, 17 April 2012

Short description:p3@Arhgef3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Arhgef3_5end
Coexpression cluster:NA
Association with transcript: -4bp_to_uc007sto.1_5end
EntrezGene:Arhgef3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Arhgef3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I622.75
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.57
GP2+ M cell, pool1.CNhs13228.11845-124H914.36
GP2+ M cell, pool2.CNhs13231.11846-124I116.37
GP2+ M cell, pool3.CNhs13240.11847-124I214.44
Ileum epithelium, pool1.CNhs13199.10252-104B99.88
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.17
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.90
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G330.73
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.51
accessory axillary lymph node, adult.CNhs10475.1063-29H97.77
adrenal gland, adult.CNhs10508.49-24D714.10
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D67.00
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F57.69
adrenal gland, neonate N00.CNhs11191.1311-23C114.46
adrenal gland, neonate N25.CNhs11223.1377-27I310.81
amnion, adult pregnant day17.5.CNhs10488.583-22A815.82
aorta, adult.CNhs10498.46-23H18.97
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B24.30
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C66.02
heart, embryo E17.CNhs11025.479-18E58.60
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E310.04
heart, neonate N03.CNhs11221.1349-25I28.23
heart, neonate N10.CNhs11118.749-24G19.03
heart, neonate N16.CNhs11209.782-15G111.51
heart, neonate N20.CNhs11127.821-26I611.55
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D211.54
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I314.54
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A54.68
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G19.76
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G73.79
kidney, neonate N10.CNhs11206.758-6D56.39
kidney, neonate N20.CNhs11113.832-19I112.69
kidney, neonate N25.CNhs11122.1353-25F317.58
kidney, neonate N30.CNhs11203.1385-42H114.93
liver, adult pregnant day01.CNhs10466.508-5B29.19
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A310.36
liver, neonate N25.CNhs11198.1368-26H19.15
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B112.38
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C610.15
lung, neonate N06.CNhs11212.683-20E511.03
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E68.13
lung, neonate N20.CNhs11109.822-18A413.27
lung, neonate N25.CNhs11119.1359-25C710.88
lung, neonate N30.CNhs11133.1394-42H210.41
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E317.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I711.50
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I47.33
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D78.00
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F823.16
skin, adult.CNhs10492.30-1C39.56
skin, neonate N00.CNhs11124.650-25G49.85
skin, neonate N03.CNhs11215.662-22H37.84
skin, neonate N06.CNhs11097.693-20I58.48
skin, neonate N10.CNhs11108.762-6C47.71
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D44.86
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C66.99
stomach, neonate N03.CNhs11193.1340-24B86.20
stomach, neonate N07.CNhs11210.718-18A97.36
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I113.48
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C55.29
testis, embryo E16.CNhs11033.470-26G515.94
testis, embryo E17.CNhs11029.486-18I515.50
testis, embryo E18.CNhs11027.503-18G522.98
testis, neonate N00.CNhs11189.1300-22B724.06
testis, neonate N07.CNhs11222.726-26I428.38
testis, neonate N10.CNhs11204.763-44D932.61
testis, neonate N20.CNhs11110.839-18H310.15
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B417.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E411.40
uterus, adult pregnant day19.CNhs10497.590-15F53.38
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D58.57
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C26.23
whole body, neonate N01.CNhs10576.659-23C68.99
whole body, neonate N06.CNhs10515.692-21D16.40
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr14:27928033..27928080,%2B&oldid=763716"