Personal tools

FFCP PHASE1:Mm9::chr13:3610263..3610280,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:3610263..3610280,-
|short_description=p3@BC016423
|description=CAGE_peak_3_at_BC016423_5end
|association_with_transcript=73bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end
|EntrezGene=105203
|EntrezGene=105203
|HGNC=
|HGNC=
|UniProt=Q5DTT3,E9PYT9,Q3TAG2
|UniProt=Q5DTT3,E9PYT9,Q3TAG2
|association_with_transcript=73bp_to_ENSMUST00000096069,ENSMUST00000110712,NM_134063,uc007pix.1,uc007piy.1_5end
|description=CAGE_peak_3_at_BC016423_5end
|id=chr13:3610263..3610280,-
|ontology_enrichment_disease=
|phase1_expression=2.7225304007815,1.39590163055744,1.81999695755814,2.11724947914781,1.50268718983904,2.35030980676646,2.56973904655078,4.26106967357202,13.6565060487117,16.6185813688615,8.21846247482424,6.86040567359893,4.62241970814255,4.89554253546385,0.333109761815663,1.82227740650843,0,5.36285681109004,7.67840828192137,6.79023442876848,2.04103896362567,1.48936426801328,1.82839852397255,1.43993180514066,0.91763712426868,2.29692785646008,0.86152399231815,0.861884930743556,1.90023419456374,1.26015064879965,0.665191531965914,0.635030673459631,0,0,0.866554859253824,0.997407872150954,2.04169356262369,0,0,0.523523743973798,0,0.683045484958446,0.971020706062307,1.38486499773135,1.52065396829272,2.38610777810186,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,4.19456515144341,2.90144856804538,4.36921938885203,1.80081605225163,1.43266719969378,1.03134418455488,2.83243045203437,2.11596391708813,1.26766280701236,0.338844532069132,0.889294796111139,0.899899717281399,0.988866362566974,0,0.599200221036809,0.384218305321555,0.933206510776299,0.675029691658453,1.05162480675691,1.99955689082663,1.54607978666129,0.734944795289724,0.479227355091182,0.919218786610021,1.10115880999389,1.91531007127782,2.30409799884365,1.58263545276233,2.10421580285542,3.64639359389732,1.3959149950069,2.8138130501584,1.5279824777681,3.83017161115768,3.41692033917847,3.16879057903011,0.681535739998656,1.43585964202892,2.02905142091174,0.860423876981386,0,0,2.59910566979068,0.448026887097336,1.40444420131752,3.57903677413921,1.55871602761721,1.7666978725517,1.12674735821344,6.41632387071589,17.8363667794652,21.3320010945999,0.216491041011214,0.760079596425296,0,1.82694207550496,8.02707439306232,1.7813056687779,0.693941307064543,1.82679286987285,0.922461989024234,0.753613202763113,1.64624189989987,1.0053327306374,2.22475470960936,4.48258006451726,3.5384422077995,2.42650274921114,0.883366073841574,0.484875253135222,1.86391761218122,2.04946557908083,1.8850203613211,1.02182822083437,1.31796636956512,0,1.52484272487678,3.2953940669061,3.20250421973039,2.63874139437015,2.60736480288415,3.83573185995496,1.66230435647648,1.29793010454206,1.42575109390443,2.86136032403214,3.0326731012041,2.10441855886474,2.73252930221678,2.29902104433473,3.24111833649629,2.71268672104287,2.58538696775046,2.69038812598185,1.40552586839593,2.84573707812917,1.5089759505299,3.78212160335639,3.16712023495108,3.94552318369635,3.05851974148158,2.43776516565517,1.85203922767149,2.38841120182192,0,0.51469581422943,0.284163499395593,1.24275463521301,1.64168241986767,1.08037236876609,1.42046841351126,1.77087808572663,1.07986979021165,1.86027155800326,1.60964040839772,0.934122738937356,1.81015834904829,1.47750717671186,1.70244500046297,1.16959989940266,0.439100230582101,1.8788898626452,2.52347938276953,3.19004298375782,1.65209391491899,1.58670339998127,2.55945900642281,1.62565670302307,1.9330119198314,1.21010114774006,1.55664630691409,0.951128130562796,0.949058123089023,1.81168850196412,1.50801125280162,2.18852119245266,1.36474860983384,0,1.72910439899755,1.39398891278057,0.948339504765408,1.5994791765362,1.1270773567308,1.22190796707189,2.13347735884388,1.19230893813542,1.45444035385792,1.18088118383682,1.72698600625512,1.23397163921801,0.296452627087149,0.667380422864376,0.786235980452812,0.449724224769707,1.21716072833102,1.4470629585145,1.2731292589071,0.575392274901621,1.29708181420028,0.823684239564244,1.43768206527355,0.372140947668503,1.24815069245824,1.51547326768267,1.79397413521912,1.4473305640901,2.40179147216586,0.947457058852424,1.79261474086228,2.20668611507745,0.704070744865506,1.34005005953453,0.952174563544055,0.975668239288994,1.89162172927429,2.21464689648775,1.75400245523236,3.11340297959902,2.24490476425664,2.02508682014116,1.50791283939272,0,0.983528546038072,1.93155722413313,2.24770825982909,1.52375192569864,0.819674726883377,1.26235463602186,1.57754109708128,1.56175497718655,2.36965737506079,1.19484398976276,2.00518806674155,1.69845918473299,0.404810701674894,0.584511715822624,0.790575555893047,3.21321316421807,1.84522110770749,1.95872164033981,1.46598263418218,2.14461159864296,1.32745138339963,1.69946445308487,1.51161778482376,1.88605079755898,2.06711325016541,3.3817866273832,2.32585463851399,2.90826983582004,1.06949213515416,2.84433082142234,4.21674434299995,2.06271086496374,4.08527526904546,2.52085531643834,0.646793418913773,2.35770738534752,2.48276327099183,1.96205699362278,2.46823530903181,0.608929898229199,1.40803024838226,2.33015277950202,2.64634077665954,3.79238381765404,1.61464426695906,1.74907482291652,1.43246812803764,2.29797259643086,0.874442509889552,2.59595422814714,1.87957968877638,1.857481811669,1.11116716421827,1.13021074202815,2.46049609897845,1.60144721244566,0.509935289981566,1.53946597556024,0.967399816630967,0,1.26534397432454,0.609958401380546,1.83609079397062,1.67270636811575,1.52853794622324,1.61837215661785,1.81837602595739,1.04702376793612,1.55537967950151,1.24267862617385,4.50954350947352,0.598066184175915,0.496375471371293,2.33341426012857,1.03327858782185,1.520605129417,1.87771581833206,3.51551839078665,5.55754525456268,6.28118714147616,1.72818003754719,4.4241556887945,1.62180172232131,1.1298205288131,1.68897069871134,2.14832034800978,1.19208812868759,1.68273629327956,1.32920574457119,3.23092639834072,1.82896335972,2.52065462842101,2.82627854145282,2.30908419936791,3.62318396762864,0.680191150845634,1.33191572024439,1.88399098879899,2.85403847818933,2.12508553435409,1.31377732815827,1.64836461840539,1.07184189539533,3.00943262421218,2.82375921308533,1.84130094602871,1.71868654031819,0.68741272937475,5.48066015816514,0.755393897389701,2.02506750069542,0.900642406448441,4.07828168085784,4.14208249401456,2.38710899443606,4.38927360741134,3.58540572083682,3.8897074730927,2.93458427679175,2.5738091183002,3.77819437262746,3.91466608753899,2.88827288632634,3.03236654116557,2.28131369901216,3.01802146217722,1.68554713445788,2.11283002936069,3.67587001315925,3.33405583898152,2.31768651889711,2.70072908649187,5.35711671044299,2.50238164228475,2.74295401908332,1.77475806159337,4.05341522910446,2.90692833264657,1.78807822789128,2.70766745253365,2.19513567447327,2.36762740294059,2.71608227691724,3.36685362994643,3.2031454893527,3.34915240076916,1.22769312950907,3.87342102964915,3.2794123866794,1.99848462350357,0.701794825336225,1.71896843238639,1.91288332068843,2.20591419119516,1.39120701372253
|phase1_expression=2.7225304007815,1.39590163055744,1.81999695755814,2.11724947914781,1.50268718983904,2.35030980676646,2.56973904655078,4.26106967357202,13.6565060487117,16.6185813688615,8.21846247482424,6.86040567359893,4.62241970814255,4.89554253546385,0.333109761815663,1.82227740650843,0,5.36285681109004,7.67840828192137,6.79023442876848,2.04103896362567,1.48936426801328,1.82839852397255,1.43993180514066,0.91763712426868,2.29692785646008,0.86152399231815,0.861884930743556,1.90023419456374,1.26015064879965,0.665191531965914,0.635030673459631,0,0,0.866554859253824,0.997407872150954,2.04169356262369,0,0,0.523523743973798,0,0.683045484958446,0.971020706062307,1.38486499773135,1.52065396829272,2.38610777810186,0,0.218025156380447,0,0.194429899074283,0.139986421625363,0,4.19456515144341,2.90144856804538,4.36921938885203,1.80081605225163,1.43266719969378,1.03134418455488,2.83243045203437,2.11596391708813,1.26766280701236,0.338844532069132,0.889294796111139,0.899899717281399,0.988866362566974,0,0.599200221036809,0.384218305321555,0.933206510776299,0.675029691658453,1.05162480675691,1.99955689082663,1.54607978666129,0.734944795289724,0.479227355091182,0.919218786610021,1.10115880999389,1.91531007127782,2.30409799884365,1.58263545276233,2.10421580285542,3.64639359389732,1.3959149950069,2.8138130501584,1.5279824777681,3.83017161115768,3.41692033917847,3.16879057903011,0.681535739998656,1.43585964202892,2.02905142091174,0.860423876981386,0,0,2.59910566979068,0.448026887097336,1.40444420131752,3.57903677413921,1.55871602761721,1.7666978725517,1.12674735821344,6.41632387071589,17.8363667794652,21.3320010945999,0.216491041011214,0.760079596425296,0,1.82694207550496,8.02707439306232,1.7813056687779,0.693941307064543,1.82679286987285,0.922461989024234,0.753613202763113,1.64624189989987,1.0053327306374,2.22475470960936,4.48258006451726,3.5384422077995,2.42650274921114,0.883366073841574,0.484875253135222,1.86391761218122,2.04946557908083,1.8850203613211,1.02182822083437,1.31796636956512,0,1.52484272487678,3.2953940669061,3.20250421973039,2.63874139437015,2.60736480288415,3.83573185995496,1.66230435647648,1.29793010454206,1.42575109390443,2.86136032403214,3.0326731012041,2.10441855886474,2.73252930221678,2.29902104433473,3.24111833649629,2.71268672104287,2.58538696775046,2.69038812598185,1.40552586839593,2.84573707812917,1.5089759505299,3.78212160335639,3.16712023495108,3.94552318369635,3.05851974148158,2.43776516565517,1.85203922767149,2.38841120182192,0,0.51469581422943,0.284163499395593,1.24275463521301,1.64168241986767,1.08037236876609,1.42046841351126,1.77087808572663,1.07986979021165,1.86027155800326,1.60964040839772,0.934122738937356,1.81015834904829,1.47750717671186,1.70244500046297,1.16959989940266,0.439100230582101,1.8788898626452,2.52347938276953,3.19004298375782,1.65209391491899,1.58670339998127,2.55945900642281,1.62565670302307,1.9330119198314,1.21010114774006,1.55664630691409,0.951128130562796,0.949058123089023,1.81168850196412,1.50801125280162,2.18852119245266,1.36474860983384,0,1.72910439899755,1.39398891278057,0.948339504765408,1.5994791765362,1.1270773567308,1.22190796707189,2.13347735884388,1.19230893813542,1.45444035385792,1.18088118383682,1.72698600625512,1.23397163921801,0.296452627087149,0.667380422864376,0.786235980452812,0.449724224769707,1.21716072833102,1.4470629585145,1.2731292589071,0.575392274901621,1.29708181420028,0.823684239564244,1.43768206527355,0.372140947668503,1.24815069245824,1.51547326768267,1.79397413521912,1.4473305640901,2.40179147216586,0.947457058852424,1.79261474086228,2.20668611507745,0.704070744865506,1.34005005953453,0.952174563544055,0.975668239288994,1.89162172927429,2.21464689648775,1.75400245523236,3.11340297959902,2.24490476425664,2.02508682014116,1.50791283939272,0,0.983528546038072,1.93155722413313,2.24770825982909,1.52375192569864,0.819674726883377,1.26235463602186,1.57754109708128,1.56175497718655,2.36965737506079,1.19484398976276,2.00518806674155,1.69845918473299,0.404810701674894,0.584511715822624,0.790575555893047,3.21321316421807,1.84522110770749,1.95872164033981,1.46598263418218,2.14461159864296,1.32745138339963,1.69946445308487,1.51161778482376,1.88605079755898,2.06711325016541,3.3817866273832,2.32585463851399,2.90826983582004,1.06949213515416,2.84433082142234,4.21674434299995,2.06271086496374,4.08527526904546,2.52085531643834,0.646793418913773,2.35770738534752,2.48276327099183,1.96205699362278,2.46823530903181,0.608929898229199,1.40803024838226,2.33015277950202,2.64634077665954,3.79238381765404,1.61464426695906,1.74907482291652,1.43246812803764,2.29797259643086,0.874442509889552,2.59595422814714,1.87957968877638,1.857481811669,1.11116716421827,1.13021074202815,2.46049609897845,1.60144721244566,0.509935289981566,1.53946597556024,0.967399816630967,0,1.26534397432454,0.609958401380546,1.83609079397062,1.67270636811575,1.52853794622324,1.61837215661785,1.81837602595739,1.04702376793612,1.55537967950151,1.24267862617385,4.50954350947352,0.598066184175915,0.496375471371293,2.33341426012857,1.03327858782185,1.520605129417,1.87771581833206,3.51551839078665,5.55754525456268,6.28118714147616,1.72818003754719,4.4241556887945,1.62180172232131,1.1298205288131,1.68897069871134,2.14832034800978,1.19208812868759,1.68273629327956,1.32920574457119,3.23092639834072,1.82896335972,2.52065462842101,2.82627854145282,2.30908419936791,3.62318396762864,0.680191150845634,1.33191572024439,1.88399098879899,2.85403847818933,2.12508553435409,1.31377732815827,1.64836461840539,1.07184189539533,3.00943262421218,2.82375921308533,1.84130094602871,1.71868654031819,0.68741272937475,5.48066015816514,0.755393897389701,2.02506750069542,0.900642406448441,4.07828168085784,4.14208249401456,2.38710899443606,4.38927360741134,3.58540572083682,3.8897074730927,2.93458427679175,2.5738091183002,3.77819437262746,3.91466608753899,2.88827288632634,3.03236654116557,2.28131369901216,3.01802146217722,1.68554713445788,2.11283002936069,3.67587001315925,3.33405583898152,2.31768651889711,2.70072908649187,5.35711671044299,2.50238164228475,2.74295401908332,1.77475806159337,4.05341522910446,2.90692833264657,1.78807822789128,2.70766745253365,2.19513567447327,2.36762740294059,2.71608227691724,3.36685362994643,3.2031454893527,3.34915240076916,1.22769312950907,3.87342102964915,3.2794123866794,1.99848462350357,0.701794825336225,1.71896843238639,1.91288332068843,2.20591419119516,1.39120701372253
|short_description=p3@BC016423
}}
}}

Revision as of 19:48, 17 April 2012

Short description:p3@BC016423
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_BC016423_5end
Coexpression cluster:NA
Association with transcript: 73bp_to_ENSMUST00000096069, ENSMUST00000110712, NM_134063, uc007pix.1, uc007piy.1_5end
EntrezGene:BC016423
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@BC016423

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E713.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.22
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.86
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.68
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H98.03
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H14.48
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.59
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.89
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C43.23
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E42.52
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I82.39
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.35
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:3610263..3610280,-&oldid=754244"