Personal tools

FFCP PHASE1:Mm9::chr13:34967389..34967431,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:34967389..34967431,+
|short_description=p1@Prpf4b
|description=CAGE_peak_1_at_Prpf4b_5end
|association_with_transcript=26bp_to_ENSMUST00000021850,ENSMUST00000077853,NM_013830,uc007qbn.2,uc007qbo.2,uc007qbp.2_5end
|EntrezGene=19134
|EntrezGene=19134
|HGNC=
|HGNC=
|UniProt=C7G3P2,Q61136,Q8C5G1
|UniProt=C7G3P2,Q61136,Q8C5G1
|association_with_transcript=26bp_to_ENSMUST00000021850,ENSMUST00000077853,NM_013830,uc007qbn.2,uc007qbo.2,uc007qbp.2_5end
|description=CAGE_peak_1_at_Prpf4b_5end
|id=chr13:34967389..34967431,+
|ontology_enrichment_disease=
|phase1_expression=32.0297694209588,74.3317618271839,51.8699132904071,200.836236307735,151.771406173743,59.5971415287209,63.3090256013875,119.5681975069,209.212041117377,201.763621689558,147.076234705709,143.430341873615,152.026248178911,128.770252763183,89.9396356902289,117.638130353489,88.1447966441465,142.588898741923,153.15682233761,114.16081633367,43.7122511376499,63.7447906709684,72.3523415914851,59.3571888563539,40.1466241867548,32.1569899904411,39.6301036466349,50.6357396811839,43.3253396360533,53.4303875091053,26.6076612786366,31.7515336729816,20.2971379902908,31.6963362030877,52.570994794732,60.6756455558497,65.5383633602205,34.3195937204264,28.9094077473806,29.3173296625327,28.2351114254887,45.0810020072574,28.1596004758069,65.9699326192025,59.305504763416,64.4249100087502,12.5182615095686,11.1192829754028,5.93152693383074,22.3594383935426,10.7789544651529,7.18762821824858,130.199302300803,101.550699881588,117.968923499005,48.1075145387221,42.9800159908135,48.988848766357,22.8617600771345,28.5655128806898,24.0855933332348,7.11573517345177,12.450127145556,4.49949858640699,9.88866362566974,10.6572017241915,7.78960287347852,9.60545763303886,38.0540877172113,26.7311757896748,27.552569937031,16.8534080798244,18.3320888989839,34.1749329809722,25.8782771749238,32.1726575313507,50.6533052597188,43.4136949489638,58.06326957086,22.8163277773235,20.6762074541446,28.6502353806218,25.4056529091257,33.2029939918691,39.2691496786402,55.0955454835759,59.6537342548241,31.6879057903011,46.0415255465759,54.9405241976331,86.3796176331,70.5547579124737,35.358509352803,77.7172595958457,79.2727229286156,101.254076483998,51.5431021883529,46.5274780638098,31.69389256155,42.7540885157512,28.0278405355594,55.1803852881567,132.498724647456,99.5493384414664,86.5964164044857,86.1423542615335,85.4336312074984,71.2507409446934,309.948646725665,61.1581612947078,50.4842300889455,64.8511468804861,41.7414050033466,54.8630411611546,64.9089663389091,37.3229776249136,68.7202010301559,141.851969138433,70.7688441559899,53.383060482645,75.5277993134546,89.7019218300161,119.290727179598,86.663115915418,57.3883976668867,71.5279754584056,75.3637133142238,40.7933857075517,54.7672678684909,52.8760957099024,51.2400675156862,38.0732686901979,47.9755123730683,37.5901722275586,52.7781633181283,43.3184172390913,50.7160031974575,61.581450451996,42.710146175291,74.0755332720388,89.7831056442656,57.0157218995013,77.4267158163002,83.038354627479,62.457506220919,75.074640086922,54.1595967955233,84.5960022316581,48.5027984098895,106.65582921465,83.7527351020397,69.9234386443964,106.492096453404,83.9287721318421,82.5186366995853,72.8465416555685,58.2836945469985,56.6165395652373,42.9086884087345,62.5519833057216,85.6020118931001,76.1662519980093,66.9987601706145,85.1989123466259,74.5110155246037,71.6204549831256,57.1422344981189,43.5534727029542,50.1907542236115,67.6369952005872,65.8278733512349,58.1875949952823,68.2800858555167,55.964076623075,55.9371263180578,47.027407857333,107.716523252718,99.6978636321562,91.7139477301506,99.8617688999886,92.1402348452967,81.4801439478304,81.8351201349123,58.5894928426682,61.214248939242,38.8689533148666,53.0317290568569,47.1526838737527,61.608651529642,84.4890244134968,78.458112104514,72.686564737844,20.6738012038859,81.6876865159561,89.0391111817335,89.6065842519383,74.6717075595359,57.0905573907193,59.5055814339261,68.9339391064742,65.9394656933774,51.7034116832344,84.1925460927503,123.799068441342,106.338416356243,102.537123247493,128.613316960311,101.053229936263,82.2441501253986,114.215366567972,99.3888940130967,73.0333359080297,192.649396746655,77.4053171150487,92.3631512419099,87.3922917697007,74.0911317845497,69.4718670763249,89.7900504209699,61.5847088254075,79.2009785508246,98.2824046638339,112.88600942677,83.4181162060242,74.5076595973223,68.2967767502296,102.147573380812,75.9623885495298,68.406095754062,101.922981753189,77.0175019121894,66.9725141232399,61.8244264151016,83.7614753080813,87.0422763243694,87.4719485786002,50.5734358461545,40.2036085011257,31.1476396215683,45.6972378239915,82.347645267643,105.418460960092,99.5256097525531,75.5141401530064,85.1090934994746,92.5660255679482,91.892029280201,90.5993159525067,103.565397821989,70.3693682963757,78.7767472905891,33.2982678857767,42.3506094319298,95.517701201098,197.790256126545,72.3486295741845,46.8601513295364,115.049098651098,54.3355482900622,106.065126040655,54.0115132721582,65.0725375764735,68.8039940282512,133.68354860685,103.310236403499,102.104187815705,78.641548929125,75.8057205871816,21.9909762430683,51.8695624776453,67.389288784064,55.2943334566419,51.5038434484639,10.656273219011,58.9025987239913,70.9637437393798,72.9948997561924,168.513750506193,80.409284494561,73.1595779378531,54.3144165214271,78.4593500781393,72.8702091574627,43.0186700664382,113.116523088178,74.9184330706498,105.560880600736,117.353548713922,151.320510087175,91.7400474558156,62.7220406677326,76.2735415163936,68.823586954603,67.7816138790731,78.7676624017027,76.8547585739488,82.9481017511434,88.0261726220913,87.7817506259634,66.0835297285621,62.238052161178,45.2837779632371,46.5317754117536,67.7259851264749,32.694190443683,74.4592399299014,44.6737924234164,58.9187100682464,42.8810613946067,67.2445379453297,55.1579021635044,52.6025714769558,55.5754525456268,56.0475160316334,39.7481408635854,183.9184722056,43.180470856805,74.3627329873349,93.6729133669902,111.354604705173,103.512985841039,80.5309511783791,106.927217674394,124.390666336118,111.71917855623,106.472451504504,159.928382293934,128.53902043148,146.797389140051,63.257777028644,88.3504094428777,108.912621923904,96.8694236420733,74.3779937023933,67.7533736378767,70.6965269671643,69.6697232006964,61.1917966923143,68.3349729566651,58.9216302729186,60.726924424576,61.6952924613838,29.4585483501376,38.5250887668747,36.4512150125175,45.032120322422,46.2205257163889,42.9741058754011,79.916257639816,71.0264274653835,64.1958357635544,88.490845012859,70.849248968258,54.2338349927542,85.7872369314235,106.108054478031,95.3130052487691,94.7614544114241,106.968264553681,96.9539394724432,94.0160734997619,83.6808741931641,76.1594318351432,104.308318390993,74.8612745603766,65.9749533985871,82.4171801606613,91.2633304833263,115.88980730627,94.0621772644489,91.3210607498239,104.358727142012,97.7796462515285,87.9991922073436,83.7810115757298,104.701745152261,89.6307151382688,102.127893441708,68.808310512021,70.9232273104057,80.2092844612591,85.9899468582111,74.6548584497017,38.2210184245057,69.9455509251771,58.8746688092337,58.7255179451349,54.9272633607594,59.3581659188279
|phase1_expression=32.0297694209588,74.3317618271839,51.8699132904071,200.836236307735,151.771406173743,59.5971415287209,63.3090256013875,119.5681975069,209.212041117377,201.763621689558,147.076234705709,143.430341873615,152.026248178911,128.770252763183,89.9396356902289,117.638130353489,88.1447966441465,142.588898741923,153.15682233761,114.16081633367,43.7122511376499,63.7447906709684,72.3523415914851,59.3571888563539,40.1466241867548,32.1569899904411,39.6301036466349,50.6357396811839,43.3253396360533,53.4303875091053,26.6076612786366,31.7515336729816,20.2971379902908,31.6963362030877,52.570994794732,60.6756455558497,65.5383633602205,34.3195937204264,28.9094077473806,29.3173296625327,28.2351114254887,45.0810020072574,28.1596004758069,65.9699326192025,59.305504763416,64.4249100087502,12.5182615095686,11.1192829754028,5.93152693383074,22.3594383935426,10.7789544651529,7.18762821824858,130.199302300803,101.550699881588,117.968923499005,48.1075145387221,42.9800159908135,48.988848766357,22.8617600771345,28.5655128806898,24.0855933332348,7.11573517345177,12.450127145556,4.49949858640699,9.88866362566974,10.6572017241915,7.78960287347852,9.60545763303886,38.0540877172113,26.7311757896748,27.552569937031,16.8534080798244,18.3320888989839,34.1749329809722,25.8782771749238,32.1726575313507,50.6533052597188,43.4136949489638,58.06326957086,22.8163277773235,20.6762074541446,28.6502353806218,25.4056529091257,33.2029939918691,39.2691496786402,55.0955454835759,59.6537342548241,31.6879057903011,46.0415255465759,54.9405241976331,86.3796176331,70.5547579124737,35.358509352803,77.7172595958457,79.2727229286156,101.254076483998,51.5431021883529,46.5274780638098,31.69389256155,42.7540885157512,28.0278405355594,55.1803852881567,132.498724647456,99.5493384414664,86.5964164044857,86.1423542615335,85.4336312074984,71.2507409446934,309.948646725665,61.1581612947078,50.4842300889455,64.8511468804861,41.7414050033466,54.8630411611546,64.9089663389091,37.3229776249136,68.7202010301559,141.851969138433,70.7688441559899,53.383060482645,75.5277993134546,89.7019218300161,119.290727179598,86.663115915418,57.3883976668867,71.5279754584056,75.3637133142238,40.7933857075517,54.7672678684909,52.8760957099024,51.2400675156862,38.0732686901979,47.9755123730683,37.5901722275586,52.7781633181283,43.3184172390913,50.7160031974575,61.581450451996,42.710146175291,74.0755332720388,89.7831056442656,57.0157218995013,77.4267158163002,83.038354627479,62.457506220919,75.074640086922,54.1595967955233,84.5960022316581,48.5027984098895,106.65582921465,83.7527351020397,69.9234386443964,106.492096453404,83.9287721318421,82.5186366995853,72.8465416555685,58.2836945469985,56.6165395652373,42.9086884087345,62.5519833057216,85.6020118931001,76.1662519980093,66.9987601706145,85.1989123466259,74.5110155246037,71.6204549831256,57.1422344981189,43.5534727029542,50.1907542236115,67.6369952005872,65.8278733512349,58.1875949952823,68.2800858555167,55.964076623075,55.9371263180578,47.027407857333,107.716523252718,99.6978636321562,91.7139477301506,99.8617688999886,92.1402348452967,81.4801439478304,81.8351201349123,58.5894928426682,61.214248939242,38.8689533148666,53.0317290568569,47.1526838737527,61.608651529642,84.4890244134968,78.458112104514,72.686564737844,20.6738012038859,81.6876865159561,89.0391111817335,89.6065842519383,74.6717075595359,57.0905573907193,59.5055814339261,68.9339391064742,65.9394656933774,51.7034116832344,84.1925460927503,123.799068441342,106.338416356243,102.537123247493,128.613316960311,101.053229936263,82.2441501253986,114.215366567972,99.3888940130967,73.0333359080297,192.649396746655,77.4053171150487,92.3631512419099,87.3922917697007,74.0911317845497,69.4718670763249,89.7900504209699,61.5847088254075,79.2009785508246,98.2824046638339,112.88600942677,83.4181162060242,74.5076595973223,68.2967767502296,102.147573380812,75.9623885495298,68.406095754062,101.922981753189,77.0175019121894,66.9725141232399,61.8244264151016,83.7614753080813,87.0422763243694,87.4719485786002,50.5734358461545,40.2036085011257,31.1476396215683,45.6972378239915,82.347645267643,105.418460960092,99.5256097525531,75.5141401530064,85.1090934994746,92.5660255679482,91.892029280201,90.5993159525067,103.565397821989,70.3693682963757,78.7767472905891,33.2982678857767,42.3506094319298,95.517701201098,197.790256126545,72.3486295741845,46.8601513295364,115.049098651098,54.3355482900622,106.065126040655,54.0115132721582,65.0725375764735,68.8039940282512,133.68354860685,103.310236403499,102.104187815705,78.641548929125,75.8057205871816,21.9909762430683,51.8695624776453,67.389288784064,55.2943334566419,51.5038434484639,10.656273219011,58.9025987239913,70.9637437393798,72.9948997561924,168.513750506193,80.409284494561,73.1595779378531,54.3144165214271,78.4593500781393,72.8702091574627,43.0186700664382,113.116523088178,74.9184330706498,105.560880600736,117.353548713922,151.320510087175,91.7400474558156,62.7220406677326,76.2735415163936,68.823586954603,67.7816138790731,78.7676624017027,76.8547585739488,82.9481017511434,88.0261726220913,87.7817506259634,66.0835297285621,62.238052161178,45.2837779632371,46.5317754117536,67.7259851264749,32.694190443683,74.4592399299014,44.6737924234164,58.9187100682464,42.8810613946067,67.2445379453297,55.1579021635044,52.6025714769558,55.5754525456268,56.0475160316334,39.7481408635854,183.9184722056,43.180470856805,74.3627329873349,93.6729133669902,111.354604705173,103.512985841039,80.5309511783791,106.927217674394,124.390666336118,111.71917855623,106.472451504504,159.928382293934,128.53902043148,146.797389140051,63.257777028644,88.3504094428777,108.912621923904,96.8694236420733,74.3779937023933,67.7533736378767,70.6965269671643,69.6697232006964,61.1917966923143,68.3349729566651,58.9216302729186,60.726924424576,61.6952924613838,29.4585483501376,38.5250887668747,36.4512150125175,45.032120322422,46.2205257163889,42.9741058754011,79.916257639816,71.0264274653835,64.1958357635544,88.490845012859,70.849248968258,54.2338349927542,85.7872369314235,106.108054478031,95.3130052487691,94.7614544114241,106.968264553681,96.9539394724432,94.0160734997619,83.6808741931641,76.1594318351432,104.308318390993,74.8612745603766,65.9749533985871,82.4171801606613,91.2633304833263,115.88980730627,94.0621772644489,91.3210607498239,104.358727142012,97.7796462515285,87.9991922073436,83.7810115757298,104.701745152261,89.6307151382688,102.127893441708,68.808310512021,70.9232273104057,80.2092844612591,85.9899468582111,74.6548584497017,38.2210184245057,69.9455509251771,58.8746688092337,58.7255179451349,54.9272633607594,59.3581659188279
|short_description=p1@Prpf4b
}}
}}

Revision as of 19:47, 17 April 2012

Short description:p1@Prpf4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Prpf4b_5end
Coexpression cluster:NA
Association with transcript: 26bp_to_ENSMUST00000021850, ENSMUST00000077853, NM_013830, uc007qbn.2, uc007qbo.2, uc007qbp.2_5end
EntrezGene:Prpf4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Prpf4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G732.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I574.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I651.87
CD326+ enterocyte, pool1.CNhs13542.11848-124I3200.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I4151.77
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I759.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I863.31
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9119.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7209.21
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2201.76
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6147.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1143.43
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4152.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8128.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A189.94
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3117.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A588.14
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2142.59
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4153.16
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6114.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A343.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H263.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I972.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D159.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D240.15
GP2+ M cell, pool1.CNhs13228.11845-124H932.16
GP2+ M cell, pool2.CNhs13231.11846-124I139.63
GP2+ M cell, pool3.CNhs13240.11847-124I250.64
Ileum epithelium, pool1.CNhs13199.10252-104B943.33
Ileum epithelium, pool2.CNhs13232.10253-104C153.43
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I331.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F552.57
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F660.68
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F765.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G834.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H329.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G928.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H245.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H428.16
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D865.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D959.31
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B364.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C322.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2130.20
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9101.55
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1117.97
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C148.11
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E142.98
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C548.99
Mouse Granule cells, donor1.CNhs12131.11713-123C322.86
Mouse Granule cells, donor2.CNhs12357.11731-123E328.57
Mouse Granule cells, donor3.CNhs12108.11636-122C724.09
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C87.79
Mouse Microglia, donor2.CNhs12634.11736-123E89.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D538.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F526.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.55
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D234.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F225.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D350.65
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D758.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.41
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E533.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I639.27
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D655.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F659.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.69
Mouse Schwann, donor1.CNhs12507.11728-123D946.04
Mouse Schwann, donor2.CNhs12573.11746-123F954.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G386.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F770.55
Mouse hepatocyte, donor1.CNhs13078.11714-123C435.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C877.72
Mouse hepatocyte, donor6.CNhs13090.11822-124F479.27
Mouse hepatocyte, donor8.CNhs13091.11824-124F6101.25
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A751.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I746.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E331.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I842.75
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.03
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H155.18
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8132.50
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B699.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G186.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G286.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G385.43
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B671.25
accessory axillary lymph node, adult.CNhs10475.1063-29H9309.95
adrenal gland, adult.CNhs10508.49-24D761.16
adrenal gland, embryo E14.CNhs11038.406-44C550.48
adrenal gland, embryo E16.CNhs11004.1254-43D664.85
adrenal gland, embryo E17.CNhs11043.1263-45I141.74
adrenal gland, embryo E18.CNhs11026.1262-18F554.86
adrenal gland, neonate N00.CNhs11191.1311-23C164.91
adrenal gland, neonate N25.CNhs11223.1377-27I337.32
amnion, adult pregnant day17.5.CNhs10488.583-22A868.72
aorta, adult.CNhs10498.46-23H1141.85
bone (os femoris), adult.CNhs10483.56-12G270.77
bone (os femoris), neonate N02.CNhs11227.1985-43F553.38
bone (os femoris), neonate N16.CNhs11225.1525-43A675.53
bone (os femoris), neonate N20.CNhs11195.1350-25C389.70
cecum, adult.CNhs10467.37-13H4119.29
cerebellum, adult.CNhs10494.15-8B286.66
cerebellum, neonate N30.CNhs11135.1395-42I257.39
colon, adult.CNhs10468.36-18H771.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C775.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D140.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D454.77
corpora quadrigemina, adult.CNhs10501.16-22A452.88
corpus striatum, adult.CNhs10487.19-21D851.24
corpus striatum, neonate N00.CNhs11226.630-43F138.07
cortex, adult.CNhs10473.12-14D547.98
cortex, neonate N30.CNhs11107.1392-42F237.59
diencephalon, adult.CNhs10482.20-12F252.78
diencephalon, neonate N30.CNhs11201.1388-42B243.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B150.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A261.58
epididymis, adult.CNhs10490.58-23B242.71
eyeball, adult.CNhs10484.31-12G474.08
eyeball, embryo E12.CNhs11016.345-16C689.78
eyeball, embryo E14.CNhs10521.399-16E257.02
eyeball, embryo E15.CNhs10593.426-16C977.43
eyeball, embryo E17.CNhs11023.1261-18D483.04
eyeball, neonate N00.CNhs11207.633-15C662.46
eyeball, neonate N01.CNhs11140.1532-43E775.07
eyeball, neonate N02.CNhs11205.1551-44G854.16
eyeball, neonate N16.CNhs11188.777-19A284.60
forelimb, embryo E11.CNhs10596.335-25E248.50
forelimb, embryo E12.CNhs10600.359-14H2106.66
forelimb, embryo E13.CNhs10589.384-1E283.75
forelimb, embryo E14.CNhs10577.413-26A869.92
forelimb, embryo E15.CNhs11007.437-20E7106.49
forelimb, embryo E17.CNhs10598.1517-43C483.93
forelimb, embryo E18.CNhs11008.1520-43B582.52
gonad, embryo E13.CNhs11044.1564-45I672.85
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C858.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D256.62
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D542.91
heart, embryo E11.CNhs10586.331-24E962.55
heart, embryo E12.CNhs11015.353-12F585.60
heart, embryo E13.CNhs11013.376-3I976.17
heart, embryo E14.CNhs10597.403-26D467.00
heart, embryo E15.CNhs11017.431-16C885.20
heart, embryo E16.CNhs11021.457-17C674.51
heart, embryo E17.CNhs11025.479-18E571.62
heart, embryo E18.CNhs11030.1283-20G357.14
heart, neonate N00.CNhs11213.639-21E343.55
heart, neonate N03.CNhs11221.1349-25I250.19
heart, neonate N10.CNhs11118.749-24G167.64
heart, neonate N16.CNhs11209.782-15G165.83
heart, neonate N20.CNhs11127.821-26I658.19
heart, neonate N25.CNhs11196.1351-25D368.28
heart, neonate N30.CNhs11202.1390-42D255.96
hippocampus, adult.CNhs10478.13-16E855.94
hippocampus, neonate N00.CNhs11228.627-43G147.03
intestinal mucosa, adult.CNhs10506.860-29I3107.72
intestine, adult.CNhs10496.178-9A399.70
intestine, embryo E12.CNhs11019.1251-16I591.71
intestine, embryo E13.CNhs11010.381-16D599.86
intestine, embryo E15.CNhs10602.976-16D892.14
intestine, embryo E16.CNhs10585.463-22H481.48
intestine, embryo E17.CNhs10582.482-18D381.84
intestine, embryo E18.CNhs10526.1289-20F758.59
intestine, neonate N00.CNhs11126.644-26D161.21
intestine, neonate N01.CNhs11192.1322-23E938.87
intestine, neonate N06.CNhs11102.688-20B853.03
intestine, neonate N07.CNhs11095.720-20F247.15
intestine, neonate N10.CNhs11098.755-23A561.61
intestine, neonate N20.CNhs11187.827-18D184.49
intestine, neonate N25.CNhs11121.1352-25E378.46
intestine, neonate N30.CNhs11131.1384-42G172.69
kidney, embryo E14.CNhs10606.411-4I920.67
kidney, embryo E15.CNhs10997.434-16F881.69
kidney, embryo E16.CNhs10584.464-22A589.04
kidney, embryo E17.CNhs11028.483-18I289.61
kidney, embryo E18.CNhs11001.1288-20C774.67
kidney, neonate N00.CNhs11214.646-21G757.09
kidney, neonate N10.CNhs11206.758-6D559.51
kidney, neonate N20.CNhs11113.832-19I168.93
kidney, neonate N25.CNhs11122.1353-25F365.94
kidney, neonate N30.CNhs11203.1385-42H151.70
liver, adult pregnant day01.CNhs10466.508-5B284.19
liver, embryo E12.CNhs10601.355-15F8123.80
liver, embryo E13.CNhs10524.378-3H6106.34
liver, embryo E14.CNhs10594.409-16E1102.54
liver, embryo E15.CNhs10520.433-16D7128.61
liver, embryo E16.CNhs10523.462-17F5101.05
liver, embryo E17.CNhs10510.481-18A382.24
liver, embryo E18.CNhs10579.499-43G4114.22
liver, neonate N00.CNhs11117.641-24F499.39
liver, neonate N03.CNhs11123.1345-25G273.03
liver, neonate N06.CNhs11101.684-20A8192.65
liver, neonate N07.CNhs11103.716-20H277.41
liver, neonate N10.CNhs11115.751-24B992.36
liver, neonate N20.CNhs11220.823-25A387.39
liver, neonate N25.CNhs11198.1368-26H174.09
liver, neonate N30.CNhs11106.1382-42D169.47
lung, adult.CNhs10474.28-22B189.79
lung, embryo E12.CNhs10522.354-16G261.58
lung, embryo E14.CNhs10604.404-26F879.20
lung, embryo E15.CNhs11020.432-17C598.28
lung, embryo E16.CNhs10998.458-17B6112.89
lung, embryo E17.CNhs10605.480-44A683.42
lung, embryo E18.CNhs10583.1287-20I674.51
lung, neonate N00.CNhs11224.640-42C668.30
lung, neonate N06.CNhs11212.683-20E5102.15
lung, neonate N07.CNhs11111.715-19A375.96
lung, neonate N10.CNhs11219.750-23E668.41
lung, neonate N20.CNhs11109.822-18A4101.92
lung, neonate N25.CNhs11119.1359-25C777.02
lung, neonate N30.CNhs11133.1394-42H266.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A161.82
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A183.76
mammary gland, adult lactating day02.CNhs10480.595-22B687.04
mammary gland, adult pregnant day19.CNhs10476.588-5H287.47
medulla oblongata, adult.CNhs10477.17-12C250.57
medulla oblongata, neonate N30.CNhs11200.1396-42A340.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C731.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C245.70
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E182.35
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2105.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E399.53
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D775.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D885.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D992.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D491.89
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D590.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6103.57
olfactory brain, adult.CNhs10489.18-22I970.37
ovary, adult.CNhs10507.91-2I778.78
ovary, embryo E18.CNhs11040.505-44H733.30
ovary, neonate N00.CNhs11217.1299-22I442.35
oviduct, adult pregnant day01.CNhs10500.988-6G695.52
pancreas, adult.CNhs10486.34-16E4197.79
pancreas, embryo E14.CNhs11012.405-44F472.35
pancreas, embryo E15.CNhs11042.1556-45F246.86
pancreas, embryo E16.CNhs11003.460-26E5115.05
pancreas, embryo E17.CNhs10599.1558-45G354.34
pancreas, embryo E18.CNhs10580.1535-43I7106.07
pancreas, neonate N00.CNhs11105.645-26G954.01
pancreas, neonate N01.CNhs11138.1531-43D765.07
pancreas, neonate N02.CNhs11139.1539-43D868.80
pancreas, neonate N16.CNhs11136.787-43B6133.68
pancreas, neonate N25.CNhs11094.1555-45E2103.31
pancreas, neonate N30.CNhs11182.1548-44H5102.10
pituitary gland, adult.CNhs10493.21-1G878.64
pituitary gland, embryo E12.CNhs11018.346-16E675.81
pituitary gland, embryo E13.CNhs11009.370-44C721.99
pituitary gland, embryo E14.CNhs11037.398-44A551.87
pituitary gland, embryo E15.CNhs10592.427-16B967.39
pituitary gland, embryo E16.CNhs11036.449-43F655.29
pituitary gland, embryo E17.CNhs11039.1265-44F551.50
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I758.90
placenta, adult pregnant day17.CNhs10464.577-18G370.96
prostate, adult.CNhs10470.859-1F872.99
skin, adult.CNhs10492.30-1C3168.51
skin, neonate N00.CNhs11124.650-25G480.41
skin, neonate N03.CNhs11215.662-22H373.16
skin, neonate N06.CNhs11097.693-20I554.31
skin, neonate N10.CNhs11108.762-6C478.46
small intestine, neonate N16.CNhs11114.790-21I172.87
spinal cord, adult.CNhs10505.24-13C943.02
spleen, adult.CNhs10465.25-2G2113.12
spleen, embryo E16.CNhs11035.461-43C174.92
spleen, embryo E18.CNhs11011.1271-21F2105.56
spleen, neonate N10.CNhs11116.752-24D1117.35
spleen, neonate N20.CNhs11112.824-19H1151.32
spleen, neonate N25.CNhs11099.1354-25G391.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C662.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C976.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D368.82
stomach, adult.CNhs10503.33-1H667.78
stomach, embryo E12.CNhs10588.356-43E378.77
stomach, embryo E15.CNhs10603.1252-16G876.85
stomach, embryo E16.CNhs11022.459-17D482.95
stomach, embryo E17.CNhs11006.1035-18D588.03
stomach, embryo E18.CNhs10999.1286-20C687.78
stomach, neonate N03.CNhs11193.1340-24B866.08
stomach, neonate N07.CNhs11210.718-18A962.24
stomach, neonate N25.CNhs11104.1355-25E445.28
stomach, neonate N30.CNhs11134.1386-42I146.53
submandibular gland, adult.CNhs10469.59-29C167.73
testis, adult.CNhs10504.57-7G532.69
testis, embryo E13.CNhs11031.389-23F574.46
testis, embryo E15.CNhs11034.443-27C544.67
testis, embryo E16.CNhs11033.470-26G558.92
testis, embryo E17.CNhs11029.486-18I542.88
testis, embryo E18.CNhs11027.503-18G567.24
testis, neonate N00.CNhs11189.1300-22B755.16
testis, neonate N07.CNhs11222.726-26I452.60
testis, neonate N10.CNhs11204.763-44D955.58
testis, neonate N20.CNhs11110.839-18H356.05
testis, neonate N30.CNhs11130.1391-42E239.75
thymus, adult.CNhs10471.38-12B5183.92
thymus, embryo E14.CNhs11041.402-44I443.18
thymus, embryo E15.CNhs11005.430-45I274.36
thymus, embryo E16.CNhs11002.456-26C593.67
thymus, embryo E17.CNhs10581.478-18C1111.35
thymus, embryo E18.CNhs10595.1273-19G4103.51
thymus, neonate N02.CNhs11181.1541-43F880.53
thymus, neonate N03.CNhs11137.2104-43C7106.93
thymus, neonate N06.CNhs11197.681-26C4124.39
thymus, neonate N07.CNhs11211.713-19D3111.72
thymus, neonate N10.CNhs11194.748-24E4106.47
thymus, neonate N20.CNhs11186.820-7A2159.93
thymus, neonate N25.CNhs11125.1362-25G7128.54
thymus, neonate N30.CNhs11132.1393-42G2146.80
tongue, adult.CNhs10499.32-1B463.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H388.35
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7108.91
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G596.87
urinary bladder, adult.CNhs10481.879-12E474.38
uterus, adult pregnant day19.CNhs10497.590-15F567.75
uterus, adult.CNhs10509.92-27E570.70
vagina, adult.CNhs10502.89-27D569.67
vesicular gland, adult.CNhs10491.51-27F861.19
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A168.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A258.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A360.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D761.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A429.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A538.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A636.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A745.03
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A846.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A942.97
whole body, embryo E11.CNhs11014.324-5I879.92
whole body, embryo E12.CNhs10587.857-27C971.03
whole body, embryo E13.CNhs10512.372-23H264.20
whole body, embryo E14.5.CNhs10578.420-27D288.49
whole body, embryo E14.CNhs10519.395-14B170.85
whole body, embryo E16.CNhs10514.453-14F254.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G585.79
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5106.11
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G595.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G594.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5106.97
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G596.95
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G594.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G583.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G576.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5104.31
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G574.86
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G565.97
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G582.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G591.26
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5115.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G594.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G591.32
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5104.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G597.78
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G588.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G583.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5104.70
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G589.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5102.13
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G568.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G570.92
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G580.21
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G585.99
whole body, embryo E17.5.CNhs10513.490-9F974.65
whole body, embryo E17.CNhs10517.475-3I538.22
whole body, embryo E18.CNhs10516.493-3B369.95
whole body, neonate N00.CNhs10525.657-19C258.87
whole body, neonate N01.CNhs10576.659-23C658.73
whole body, neonate N06.CNhs10515.692-21D154.93
whole body, neonate N10.CNhs10518.761-6B459.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:34967389..34967431,%2B&oldid=754121"