Swissregulon:RXRA VDR(dimer).p1: Difference between revisions
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=1.000:7421:VDR:vitamin D (1,25- dihydroxyvitamin D3) receptor::NM_000376:NR1I1 | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0032502!developmental process!8.44815865775866e-05!83478;23166;2535;23645;137814;2354;79811;54434;3574;4792;3222;5880;56913;2246;8517;8943;56848;2022;733;382;3488;5376;4791;1390;2537$GO:0032501!multicellular organismal process!8.44815865775866e-05!4634;83478;358;23166;2535;1997;137814;2354;3574;1837;4792;3222;3291;56913;2246;8517;8943;2022;10686;733;382;5539;5376;4791;8292;1390;710$GO:0065007!biological regulation!8.44815865775866e-05!6237;23166;2001;1997;64764;2354;22930;678;3574;3222;3291;313;2022;3488;4791;710;8986;9970;6560;23645;137814;79811;9969;1981;4792;23315;7490;8517;4330;5880;8943;56848;10686;382;733;5376;8292;1390;2537$GO:0050789!regulation of biological process!0.00166753351239178!6237;23166;2001;64764;1997;2354;678;3574;3222;313;2022;3488;4791;710;8986;9970;23645;137814;79811;9969;1981;4792;7490;8517;4330;5880;8943;56848;382;733;5376;8292;1390;2537$GO:0048869!cellular developmental process!0.00166753351239178!4792;83478;8517;2246;56913;2535;8943;56848;23645;382;733;79811;1390;3574;2537$GO:0030154!cell differentiation!0.00166753351239178!4792;83478;8517;2246;56913;2535;8943;56848;23645;382;733;79811;1390;3574;2537$GO:0048856!anatomical structure development!0.00166753351239178!83478;23166;2535;137814;54434;3574;4792;56913;2246;5880;8943;2022;382;3488;5376;4791$GO:0005515!protein binding!0.00166753351239178!6581;79109;83478;81844;23166;4716;9454;2535;54843;1997;64764;2354;22930;54434;3678;3574;1837;2246;2022;54461;3488;5539;4791;51071;8986;9970;4688;257240;6168;23644;64092;9969;1981;4792;5880;8517;8943;51400;56848;10686;382;1390;2537$GO:0019899!enzyme binding!0.00249424753773429!54843;4792;79109;22930;51400;56848;8986$GO:0044459!plasma membrane part!0.00250833557858464!6581;83478;358;23166;6560;9454;2535;54843;8671;3678;5800;1179;1837;2022;10686;5376;8292$GO:0005737!cytoplasm!0.00250833557858464!79001;83478;2109;4716;9454;9167;54843;64764;22930;54434;678;51296;1837;3291;57158;6819;4791;51071;57124;25930;4688;146456;4634;6168;23644;1981;4792;58488;9659;54732;8517;5880;8943;56848;382;375686;8292;2537$GO:0000267!cell fraction!0.00328060565644588!6581;4688;3291;5880;6560;56848;54843;382;5539;22930;3678$GO:0002253!activation of immune response!0.00347169474315858!1997;733;8517;710$GO:0017016!Ras GTPase binding!0.00441982285148486!54843;79109;22930;56848$GO:0009887!organ morphogenesis!0.00441982285148486!382;83478;2246;56913;23166;3574;2022$GO:0031267!small GTPase binding!0.00530905562895139!54843;79109;22930;56848$GO:0050778!positive regulation of immune response!0.00530905562895139!1997;733;8517;710$GO:0002684!positive regulation of immune system process!0.00530905562895139!1997;733;8517;710$GO:0009653!anatomical structure morphogenesis!0.00744894062055555!83478;5880;2246;56913;23166;2535;2022;382;3488;54434;3574$GO:0051020!GTPase binding!0.00744894062055555!54843;79109;22930;56848$GO:0050776!regulation of immune response!0.00744894062055555!1997;733;8517;710$GO:0007275!multicellular organismal development!0.00744894062055555!83478;23166;2535;137814;2354;3574;4792;3222;56913;2246;8943;2022;382;5376;4791;1390$GO:0002682!regulation of immune system process!0.00744894062055555!1997;733;8517;710$GO:0004869!cysteine protease inhibitor activity!0.00822348344179233!1473;1472;1469$GO:0051240!positive regulation of multicellular organismal process!0.0082666924222951!1997;733;8517;710$GO:0048523!negative regulation of cellular process!0.0110086740485308!6237;4792;7490;4330;56848;23645;382;2354;5376;2537;3574$GO:0065008!regulation of biological quality!0.0110086740485308!23315;3291;6560;10686;382;3488;678;2537;3574;710$GO:0048513!organ development!0.0110086740485308!4792;83478;2246;56913;23166;8943;2022;137814;382;4791;3574$GO:0044444!cytoplasmic part!0.012322703286088!79001;4688;146456;4634;2109;4716;6168;9167;54843;64764;1981;51296;4792;58488;9659;3291;54732;8517;8943;56848;57158;382;375686;25930;2537$GO:0007267!cell-cell signaling!0.0132490207285672!3291;2246;23166;2535;5376;8292;3574;1837$GO:0048519!negative regulation of biological process!0.0133853748186213!6237;4792;7490;4330;56848;23645;382;2354;5376;2537;3574$GO:0001525!angiogenesis!0.0141411776288777!83478;2246;56913;23166$GO:0005624!membrane fraction!0.0184509911857937!6581;3291;5880;6560;56848;54843;382;3678$GO:0048514!blood vessel morphogenesis!0.0217342806861505!83478;2246;56913;23166$GO:0048646!anatomical structure formation!0.0245066550992869!83478;2246;56913;23166$GO:0008219!cell death!0.0246796729410753!4792;8517;56848;23645;382;733;79811;2537;3574$GO:0016265!death!0.0246796729410753!4792;8517;56848;23645;382;733;79811;2537;3574$GO:0050852!T cell receptor signaling pathway!0.0247678301844108!1997;8517$GO:0051239!regulation of multicellular organismal process!0.0247678301844108!1997;733;8517;710;3574$GO:0008283!cell proliferation!0.0247678301844108!4792;5880;2246;56848;2001;5376;3574;678$GO:0005887!integral to plasma membrane!0.0247678301844108!6581;358;23166;6560;2535;2022;5376;8671;3678;1179;5800$GO:0001568!blood vessel development!0.0247678301844108!83478;2246;56913;23166$GO:0005886!plasma membrane!0.0247678301844108!6581;6237;83478;358;23166;6560;9454;2535;54843;8671;54434;3678;5800;1179;1837;2022;57158;10686;382;5376;8292$GO:0001944!vasculature development!0.0247678301844108!83478;2246;56913;23166$GO:0006959!humoral immune response!0.0247678301844108!733;710;3574$GO:0050794!regulation of cellular process!0.0247678301844108!6237;23645;2001;64764;1997;137814;2354;79811;9969;678;3574;1981;4792;3222;7490;5880;8517;4330;56848;2022;382;3488;5376;4791;1390;8986;2537;9970$GO:0031226!intrinsic to plasma membrane!0.0247678301844108!6581;358;23166;6560;2535;2022;5376;8671;3678;1179;5800$GO:0002460!adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains!0.0247678301844108!733;4791;710$GO:0002250!adaptive immune response!0.0247678301844108!733;4791;710$GO:0008134!transcription factor binding!0.025255941945523!4792;2354;4791;9969;1390;9970$GO:0048534!hemopoietic or lymphoid organ development!0.026482969904763!4792;4791;8943;3574$GO:0048731!system development!0.0294606114170714!4792;83478;2246;56913;23166;8943;2022;137814;382;5376;4791;3574$GO:0002520!immune system development!0.0306846681297587!4792;4791;8943;3574$GO:0016563!transcription activator activity!0.0308358110237841!1997;4791;9969;1390;9970$GO:0003713!transcription coactivator activity!0.0326401788817169!4791;9969;1390;9970$GO:0007154!cell communication!0.0328663777630358!6237;83478;23166;9454;2535;1997;9969;3678;3574;1837;4792;3291;5880;2246;8517;56848;2022;382;3488;5376;4791;1390;8292;8986;2537;9970$GO:0009166!nucleotide catabolic process!0.0328663777630358!51071;272$GO:0050851!antigen receptor-mediated signaling pathway!0.0328663777630358!1997;8517$GO:0017137!Rab GTPase binding!0.0328663777630358!54843;22930$GO:0006915!apoptosis!0.0328663777630358!4792;8517;56848;23645;382;79811;2537;3574$GO:0012501!programmed cell death!0.0328663777630358!4792;8517;56848;23645;382;79811;2537;3574$GO:0006958!complement activation, classical pathway!0.0328663777630358!733;710$GO:0015095!magnesium ion transmembrane transporter activity!0.0328663777630358!10686$GO:0016263!glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity!0.0328663777630358!56913$GO:0006669!sphinganine-1-phosphate biosynthetic process!0.0328663777630358!56848$GO:0009169!purine ribonucleoside monophosphate catabolic process!0.0328663777630358!272$GO:0009158!ribonucleoside monophosphate catabolic process!0.0328663777630358!272$GO:0001977!renal regulation of blood volume!0.0328663777630358!3291$GO:0009125!nucleoside monophosphate catabolic process!0.0328663777630358!272$GO:0002017!aldosterone mediated regulation of blood volume!0.0328663777630358!3291$GO:0047057!vitamin-K-epoxide reductase (warfarin-sensitive) activity!0.0328663777630358!79001$GO:0045746!negative regulation of Notch signaling pathway!0.0328663777630358!4792$GO:0050528!acyloxyacyl hydrolase activity!0.0328663777630358!313$GO:0046511!sphinganine biosynthetic process!0.0328663777630358!56848$GO:0009128!purine nucleoside monophosphate catabolic process!0.0328663777630358!272$GO:0016900!oxidoreductase activity, acting on the CH-OH group of donors, disulfide as acceptor!0.0328663777630358!79001$GO:0051723!protein methylesterase activity!0.0328663777630358!51400$GO:0048273!mitogen-activated protein kinase p38 binding!0.0328663777630358!8986$GO:0003845!11-beta-hydroxysteroid dehydrogenase activity!0.0328663777630358!3291$GO:0006196!AMP catabolic process!0.0328663777630358!272$GO:0004711!ribosomal protein S6 kinase activity!0.0328663777630358!8986$GO:0051722!protein C-terminal methylesterase activity!0.0328663777630358!51400$GO:0003700!transcription factor activity!0.0336290314281634!3222;7490;2001;64764;1997;2354;137814;4791;1390;678;9970$GO:0043565!sequence-specific DNA binding!0.0338071845259239!3222;2001;64764;1997;2354;137814;1390;9970$GO:0002429!immune response-activating cell surface receptor signaling pathway!0.0354826973071242!1997;8517$GO:0002455!humoral immune response mediated by circulating immunoglobulin!0.0354826973071242!733;710$GO:0009617!response to bacterium!0.0360615670184235!4792;23166;10578$GO:0051051!negative regulation of transport!0.036585454273224!4792;382$GO:0002768!immune response-regulating cell surface receptor signaling pathway!0.036585454273224!1997;8517$GO:0002757!immune response-activating signal transduction!0.0385216180055741!1997;8517$GO:0044424!intracellular part!0.0397502832127844!79001;83478;2109;4716;112802;9454;2001;9167;54843;1997;64764;2354;22930;54434;678;51296;1837;3222;3291;57158;6819;4791;57124;51071;8986;25930;9970;4688;146456;4634;6168;23644;137814;79811;9969;1981;4792;9659;58488;7490;54732;5880;8517;8943;56848;382;375686;8292;1390;2537$GO:0002764!immune response-regulating signal transduction!0.0400434473238249!1997;8517$GO:0044464!cell part!0.0432164007150996!79001;83478;358;81844;9454;2535;8470;79639;2001;9167;54843;2354;3678;51296;1837;3291;57158;6819;4791;51071;4688;4634;6560;6168;137814;8671;5800;1179;63906;4792;58488;9777;23315;7490;54732;56913;8517;8943;382;375686;1390;8292;2537;6237;6581;2109;112802;4716;23166;64764;1997;22930;54434;678;3222;2022;5539;57124;25930;8986;9970;146456;23644;79811;3101;9969;1981;9659;5880;56848;10686;733;5376$GO:0051234!establishment of localization!0.0436829083627415!6581;146456;2109;358;23166;6560;9454;54843;8671;1179;51296;4792;58488;23315;54732;8943;10686;733;382;5539;8292$GO:0004857!enzyme inhibitor activity!0.0441205567615836!1473;1472;1469;51400;710$GO:0008104!protein localization!0.0441205567615836!4792;9454;8943;54843;382;5539;8292;51296$GO:0015296!anion:cation symporter activity!0.0441205567615836!8671;6560$GO:0006956!complement activation!0.0441205567615836!733;710$GO:0002541!activation of plasma proteins during acute inflammatory response!0.0441205567615836!733;710$GO:0004866!endopeptidase inhibitor activity!0.0441205567615836!1473;1472;1469;710$GO:0009055!electron carrier activity!0.0441205567615836!4688;2109;4716;9167$GO:0051179!localization!0.0441205567615836!6581;6237;146456;2109;358;23166;6560;9454;54843;8671;1179;51296;4792;58488;23315;54732;8943;10686;733;382;5539;8292$GO:0048261!negative regulation of receptor-mediated endocytosis!0.0441205567615836!382$GO:0002268!follicular dendritic cell differentiation!0.0441205567615836!4791$GO:0033257!Bcl3/NF-kappaB2 complex!0.0441205567615836!4791$GO:0001507!acetylcholine catabolic process in synaptic cleft!0.0441205567615836!8292$GO:0006668!sphinganine-1-phosphate metabolic process!0.0441205567615836!56848$GO:0001865!NK T cell differentiation!0.0441205567615836!8943$GO:0046033!AMP metabolic process!0.0441205567615836!272$GO:0008481!sphinganine kinase activity!0.0441205567615836!56848$GO:0033256!I-kappaB/NF-kappaB complex!0.0441205567615836!4791$GO:0006482!protein amino acid demethylation!0.0441205567615836!51400$GO:0002266!follicular dendritic cell activation!0.0441205567615836!4791$GO:0051902!negative regulation of mitochondrial depolarization!0.0441205567615836!2537$GO:0006581!acetylcholine catabolic process!0.0441205567615836!8292$GO:0051138!positive regulation of NK T cell differentiation!0.0441205567615836!8943$GO:0008525!phosphatidylcholine transmembrane transporter activity!0.0441205567615836!58488$GO:0048007!antigen processing and presentation, exogenous lipid antigen via MHC class Ib!0.0441205567615836!8943$GO:0008214!protein amino acid dealkylation!0.0441205567615836!51400$GO:0051136!regulation of NK T cell differentiation!0.0441205567615836!8943$GO:0006667!sphinganine metabolic process!0.0441205567615836!56848$GO:0051019!mitogen-activated protein kinase binding!0.0441205567615836!8986$GO:0006952!defense response!0.0448294054613724!4688;733;313;23166;710;10578$GO:0030217!T cell differentiation!0.0448294054613724!8943;3574$GO:0006898!receptor-mediated endocytosis!0.0448294054613724!382;23166$GO:0005622!intracellular!0.0448294054613724!79001;6237;83478;2109;81844;4716;112802;9454;8470;2001;9167;54843;1997;64764;2354;22930;54434;678;51296;1837;3222;3291;57158;6819;4791;57124;51071;8986;25930;9970;4688;146456;4634;6168;23644;137814;79811;9969;1981;63906;4792;9659;58488;7490;54732;5880;8517;8943;56848;382;375686;8292;1390;2537$GO:0007588!excretion!0.0465449125098834!10686;358$GO:0044425!membrane part!0.046667886210497!79001;6581;83478;358;23166;4716;9454;2535;79639;9167;54843;64764;3678;51296;1837;57158;2022;57124;146456;6560;8671;1179;5800;23315;9777;54732;56913;8943;10686;733;5376;8292;2537$GO:0001726!ruffle!0.0479725129702504!382;3678$GO:0030414!protease inhibitor activity!0.0483997472756807!1473;1472;1469;710 | |||
|gostat_on_mara_mm9= | |||
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|motif_activities_mm9=-1.12223030273,0.148389385579,-0.109521718203,0.258360780627,0.152306475356,0.0494501293781,-0.222058815145,-0.767620923856,-0.235929523498,-0.473826303171,-0.0994725564984,-0.0491757282106,-0.183868025753,-0.335710065905,-0.203786474653,-0.639739658557,-0.749038195857,0.662605525492,0.616917924235,0.323571104232,-1.23044328124,0.126904115349,0.150348319363,0.0521490848309,-0.175777449789,-0.354367194171,0.261044275723,-0.0406616151526,-0.669990657232,-0.683945057009,-0.372085253983,-0.637053140929,-0.149760251257,0.14277645358,-0.189157063665,-0.356350564615,-0.54318471815,0.302590600647,0.373504163452,0.380711285959,0.533406487826,0.482580969491,0.658339522772,-0.185672769242,-0.0294929930853,-0.506196708689,1.21432608418,0.454199305667,1.41720144338,1.14072746004,0.309199779025,0.37440477004,0.479158542364,-0.479632614184,-0.213807654204,0.375756038206,0.851336532545,0.791486577299,-1.41013229341,-0.811291370515,-1.23015602987,-0.0106589259851,0.479488049509,0.802589342198,1.04614817977,1.46020118568,1.0424436692,0.913887987243,-1.11239662458,-0.791441895207,-1.18405188772,-0.929583080674,-0.461982014637,-1.27536950296,-1.15177741173,-1.1282858213,-1.41613855848,-1.57142756667,-1.68658383462,-1.23955169459,-1.33001052,-1.2981169771,-0.814193014691,-0.396845519162,-1.12974531219,-1.4998042912,-1.49498195726,-1.46031882334,-0.646210554696,-0.501236884688,-0.832552952458,0.52632690183,0.941410417153,0.5864275746,0.499246249392,0.0449293740972,1.37730136552,-0.512498541513,-0.630077377141,-0.339047318216,-0.640967697518,-0.699103829197,-0.553431935223,0.332926796266,-0.0752599460511,0.0547109192545,0.264632688435,0.0969844177456,0.747623910072,0.34775495616,-0.466558087996,0.183194597705,-0.115768177552,0.0729270985219,0.0631459080657,0.182472598655,2.19017474479,0.586979946254,0.578980633756,0.615280251361,1.35744758716,0.937945661255,0.67496429829,-1.00361563176,-0.885606779616,2.27933550151,-0.328047314119,-0.509882243589,-0.525334413542,-1.47543745078,-1.64584681733,-1.6064062252,-1.6849771081,-1.81126985138,-1.23368050835,-1.56219534278,0.318298164142,1.48569399647,0.299112473102,0.0178532046127,-0.994715525049,-0.75473427921,-0.657237655374,-0.379559393726,-0.304420953583,-0.386826766185,-0.394127549837,-0.0520557154253,-0.873447904129,-0.711556114903,-0.578639435086,-0.220831210386,-0.148109763985,0.284472170931,0.251955554409,-0.976636545837,-0.157113077533,-0.414472447917,-0.399333788182,-0.56566276408,-0.772917255312,-0.792525548771,-0.698898922498,-0.668632965982,-0.414048951409,-0.365144520113,-0.246030579173,-0.267202077612,-0.507048014172,-0.381809334557,-0.167411457393,-0.500675051224,-0.265029060331,-0.207707433853,-1.83705588614,-1.43226331869,2.69642950061,0.457701176474,-0.659933356871,-0.718456532843,-0.173140262167,0.435899133734,0.598481696126,1.16386361392,1.81805776884,0.646494912046,1.64717644559,1.18411542682,1.85267254968,1.75839442272,0.377928862102,1.56294258275,-0.163636197638,-0.584211146699,-0.32993236568,-0.452803877863,-0.347575099014,0.0766434072167,-0.108335919657,0.121820852702,0.352404188867,0.436472941407,0.866301814355,-0.513226583329,-0.461562941725,-0.195620982936,-0.107004809082,0.0927893533984,0.342503404234,0.506612873935,1.30656531505,0.351731103676,1.44069067305,1.18463264233,0.275578544041,0.709334537791,0.57147246944,0.930892559975,0.497925122138,-0.86932620054,-0.344739793694,0.0900190323307,0.157548985244,0.551041587871,0.726347163494,1.15480413875,0.0489604049941,0.0622920301377,0.519920797905,0.435449392716,0.778178110774,0.515834451509,0.209221342804,-0.0749580420955,-0.0696582914207,0.256925511083,-1.5764833461,-1.38569609435,-0.852452735474,0.977814207979,-0.832978396828,-0.614490006646,-0.709996848267,-0.721450776133,-0.824034158075,-0.524597870619,-0.309733468164,-0.549219472366,-0.568250150265,-1.23792197095,-0.522272309526,0.177750646801,-0.0609433953433,0.0621152549078,4.12893177232,0.487544902048,0.810197792337,2.41891072739,2.5833058572,2.69353523868,2.41913150479,3.02226229602,3.05846655425,3.20192075314,3.64527643195,3.43300893602,2.22064700772,-0.786389290504,0.219656384063,-0.464004429791,-0.39344296666,0.433162983891,1.13386711608,2.45051692024,0.992346815378,0.979566286883,0.204230964323,-0.669383485511,-0.156959357106,-0.597858135725,-0.34120536818,-0.217260132867,1.94863117154,-1.39481297072,0.659729869656,0.965135666276,0.58254974148,0.0127715389608,0.438295326224,0.377991698276,-0.364119969477,-0.597137014582,-0.559392711969,3.33232660221,-0.674364093101,0.237070150034,0.682734760599,0.659994516587,1.19202017085,1.49289924751,0.926780949022,0.659251197837,0.0615186344517,-0.429239450784,-3.11372574131,-0.78261762167,-0.960402987608,-0.805287354807,-0.833131946164,-0.628080533315,-0.782193758719,-0.985908680772,-1.59328983876,-2.60182376241,-2.38927377764,1.02036186366,-0.261737254517,-0.114704090835,0.166277431999,0.184842019495,0.509783316827,0.657265049969,0.48483356297,0.59365538674,0.73303965486,0.617537367723,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| |||
|name=RXRA_VDR{dimer}.p1 | |name=RXRA_VDR{dimer}.p1 | ||
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}} | }} |
Latest revision as of 09:59, 17 April 2012
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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