Swissregulon:GZF1.p1: Difference between revisions
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=0.810:64412:GZF1:GDNF-inducible zinc finger protein 1:ZBTB:NM_022482:dJ322G13.2,ZBTB23 | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0032501!multicellular organismal process!2.65011876146461e-08!1305;3090;8200;11075;6239;8613;388585;3206;4336;10911;1297;3202;7498;10418;133;7424;3375;2300;4883;2218$GO:0007275!multicellular organismal development!8.37792650060174e-07!1305;4336;3206;3202;3090;8200;1297;11075;10418;6239;133;7424;8613;4883;2300;2218;388585$GO:0032502!developmental process!8.37792650060174e-07!1305;3090;8200;11045;11075;6239;8613;388585;3206;4336;1297;3202;7498;10418;133;7424;3375;2300;4883;2218$GO:0048856!anatomical structure development!4.08473181232368e-05!1305;4336;3202;8200;1297;11045;11075;7498;133;7424;8613;4883;2218;388585$GO:0065007!biological regulation!0.000139700969338153!6659;3090;8200;4673;55885;6239;10457;57659;59269;8613;388585;10911;3206;3202;7498;389136;5430;133;7424;3375;7328;2300;4883$GO:0050789!regulation of biological process!0.00042308837682631!6659;3090;8200;4673;55885;6239;10457;57659;59269;8613;388585;3206;3202;7498;389136;5430;133;7424;3375;7328;2300$GO:0050794!regulation of cellular process!0.00042308837682631!6659;3090;8200;4673;55885;6239;10457;57659;59269;8613;388585;3206;3202;7498;389136;5430;133;3375;7424;2300$GO:0048731!system development!0.000582604175856648!1305;4336;3202;1297;11075;133;7424;8613;4883;2218;388585$GO:0048513!organ development!0.00128872100679595!1305;3202;1297;133;7424;8613;4883;2218;388585$GO:0044421!extracellular region part!0.00163337181489306!1305;10911;8200;1297;10418;133;56265;2218$GO:0002009!morphogenesis of an epithelium!0.00431058317162458!7424;11045;7498$GO:0051537!2 iron, 2 sulfur cluster binding!0.00716892936511825!7498;112812$GO:0005625!soluble fraction!0.0121676957505152!3375;4336;11075;133$GO:0005615!extracellular space!0.0280949219035739!10911;56265;8200;2218;133$GO:0045595!regulation of cell differentiation!0.0280949219035739!3375;7498;388585$GO:0030855!epithelial cell differentiation!0.0280949219035739!11045;7498$GO:0042803!protein homodimerization activity!0.0280949219035739!4883;11045;7164$GO:0004855!xanthine oxidase activity!0.0280949219035739!7498$GO:0006701!progesterone biosynthetic process!0.0280949219035739!133$GO:0016941!natriuretic peptide receptor activity!0.0280949219035739!4883$GO:0030936!transmembrane collagen!0.0280949219035739!1305$GO:0005600!collagen type XIII!0.0280949219035739!1305$GO:0016727!oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor!0.0280949219035739!7498$GO:0008015!blood circulation!0.0280949219035739!10911;4883;133$GO:0003013!circulatory system process!0.0280949219035739!10911;4883;133$GO:0000267!cell fraction!0.0280949219035739!3375;4336;4883;10899;11075;133$GO:0044424!intracellular part!0.0280949219035739!6659;1305;3090;11045;11075;4673;6239;10457;140258;57659;8613;8605;388585;1453;3206;3883;4336;1297;3202;7498;389136;5430;345456;10391;2300;7164;2218;85293;10397$GO:0045449!regulation of transcription!0.0357074239569676!6659;3206;3202;3090;55885;389136;6239;5430;57659;59269;2300;388585$GO:0005581!collagen!0.0357074239569676!1305;1297$GO:0019222!regulation of metabolic process!0.0357074239569676!6659;3206;3202;3090;55885;389136;6239;5430;57659;59269;7328;2300;388585$GO:0008217!regulation of blood pressure!0.0357074239569676!10911;4883$GO:0043185!vascular endothelial growth factor receptor 3 binding!0.0357074239569676!7424$GO:0016726!oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor!0.0357074239569676!7498$GO:0046475!glycerophospholipid catabolic process!0.0357074239569676!8605$GO:0004854!xanthine dehydrogenase activity!0.0357074239569676!7498$GO:0030156!benzodiazepine receptor binding!0.0357074239569676!1622$GO:0019219!regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process!0.0357074239569676!6659;3206;3202;3090;55885;389136;6239;5430;57659;59269;2300;388585$GO:0005102!receptor binding!0.0357074239569676!7424;3375;10911;8200;1622;133$GO:0007399!nervous system development!0.0357074239569676!7424;4336;11075;2218;388585$GO:0001501!skeletal development!0.0357074239569676!1305;4883;3202$GO:0009653!anatomical structure morphogenesis!0.0357074239569676!7424;1305;8200;1297;11045;7498$GO:0048869!cellular developmental process!0.0357074239569676!7424;3375;1305;8200;11045;11075;7498;388585$GO:0030154!cell differentiation!0.0357074239569676!7424;3375;1305;8200;11045;11075;7498;388585$GO:0031404!chloride ion binding!0.0357074239569676!4883;2554$GO:0043168!anion binding!0.0357074239569676!4883;2554$GO:0005179!hormone activity!0.0358233015995121!3375;10911;133$GO:0005622!intracellular!0.0358233015995121!6659;1305;3090;11045;11075;4673;6239;10457;140258;57659;59269;2794;8613;8605;388585;1453;3206;3883;4336;1297;3202;7498;389136;5430;345456;10391;2300;7164;2218;85293;10397$GO:0045596!negative regulation of cell differentiation!0.0358233015995121!3375;388585$GO:0006350!transcription!0.0358233015995121!6659;3206;3202;3090;55885;389136;6239;5430;57659;59269;2300;388585$GO:0042127!regulation of cell proliferation!0.0358233015995121!7424;4673;10457;133$GO:0008284!positive regulation of cell proliferation!0.0358233015995121!7424;4673;133$GO:0005594!collagen type IX!0.0358233015995121!1297$GO:0042668!auditory receptor cell fate determination!0.0358233015995121!388585$GO:0008195!phosphatidate phosphatase activity!0.0358233015995121!8613$GO:0045779!negative regulation of bone resorption!0.0358233015995121!3375$GO:0047499!calcium-independent phospholipase A2 activity!0.0358233015995121!8605$GO:0001958!endochondral ossification!0.0358233015995121!1305$GO:0010468!regulation of gene expression!0.0358233015995121!6659;3206;3202;3090;55885;389136;6239;5430;57659;59269;2300;388585$GO:0050793!regulation of developmental process!0.0358233015995121!3375;7498;388585$GO:0005882!intermediate filament!0.0358233015995121!3883;85293;140258$GO:0045111!intermediate filament cytoskeleton!0.0358233015995121!3883;85293;140258$GO:0048699!generation of neurons!0.0377959360773032!7424;11075;388585$GO:0051093!negative regulation of developmental process!0.0399977227805354!3375;388585$GO:0042448!progesterone metabolic process!0.0399977227805354!133$GO:0004681!casein kinase I activity!0.0399977227805354!1453$GO:0002052!positive regulation of neuroblast proliferation!0.0399977227805354!7424$GO:0019369!arachidonic acid metabolic process!0.0399977227805354!8605$GO:0060120!inner ear receptor cell fate commitment!0.0399977227805354!388585$GO:0005172!vascular endothelial growth factor receptor binding!0.0399977227805354!7424$GO:0009912!auditory receptor cell fate commitment!0.0399977227805354!388585$GO:0015698!inorganic anion transport!0.0399977227805354!1305;2554;1297$GO:0031323!regulation of cellular metabolic process!0.0399977227805354!6659;3206;3202;3090;55885;389136;6239;5430;57659;59269;2300;388585$GO:0022008!neurogenesis!0.0399977227805354!7424;11075;388585$GO:0048770!pigment granule!0.040367108783679!4673;10457$GO:0042470!melanosome!0.040367108783679!4673;10457$GO:0051536!iron-sulfur cluster binding!0.0459910190555103!7498;112812$GO:0051540!metal cluster binding!0.0459910190555103!7498;112812$GO:0048598!embryonic morphogenesis!0.0483688193474133!7424;8200$GO:0005515!protein binding!0.0496374155291734!1305;3090;8200;11045;11075;4673;57659;1622;10911;1453;3883;10418;10391;345456;5430;133;7424;3375;4883;7164;10397$GO:0046849!bone remodeling!0.0496374155291734!3375;1305$GO:0008354!germ cell migration!0.0496374155291734!8613$GO:0016743!carboxyl- or carbamoyltransferase activity!0.0496374155291734!29101$GO:0045124!regulation of bone resorption!0.0496374155291734!3375$GO:0005678!chromatin assembly complex!0.0496374155291734!4673$GO:0005593!FACIT collagen!0.0496374155291734!1297 | |||
|gostat_on_mara_mm9=GO:0048513!organ development!0.00842628783955046!20677;12817;15395;15402;433938;22341;14241;14009;286940;16869;15208$GO:0048856!anatomical structure development!0.00842628783955046!20677;12817;15395;15402;14563;433938;22341;14241;14009;286940;16869;15208$GO:0032502!developmental process!0.00842628783955046!20677;12817;15395;15402;15248;14563;433938;22341;14241;14009;286940;16869;17988;15208$GO:0007275!multicellular organismal development!0.0188089998787988!20677;12817;15395;15402;15248;14563;433938;22341;14241;14009;286940;16869;15208$GO:0048731!system development!0.0239975008983321!20677;12817;15395;15402;433938;22341;14241;14009;286940;16869;15208 | |||
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| |||
|name=GZF1.p1 | |name=GZF1.p1 | ||
|weight_matrix=NA:GZF1.p1;PO:A:C:G:T;01:3.353006:6.19862:8.04369:50.405334;02:1.521955:4.640791:58.905863:2.932041;03:4.144576:48.837059:3.401438:11.617577;04:5.644736:8.534435:48.479766:5.341713;05:5.990855:53.411207:1.532305:7.066283;06:12.614081:14.931984:13.6881:26.766485;07:1.621686:3.33807:7.667297:55.373597;08:29.2691:28.808567:2.144777:7.778206;09:7.77032:4.726177:0.965644:54.538509;10:47.248598:2.387852:8.132428:10.231772;11:6.111482:2.467576:0.885639:58.535953;12:57.396271:0.690034:5.506417:4.407928 | |weight_matrix=NA:GZF1.p1;PO:A:C:G:T;01:3.353006:6.19862:8.04369:50.405334;02:1.521955:4.640791:58.905863:2.932041;03:4.144576:48.837059:3.401438:11.617577;04:5.644736:8.534435:48.479766:5.341713;05:5.990855:53.411207:1.532305:7.066283;06:12.614081:14.931984:13.6881:26.766485;07:1.621686:3.33807:7.667297:55.373597;08:29.2691:28.808567:2.144777:7.778206;09:7.77032:4.726177:0.965644:54.538509;10:47.248598:2.387852:8.132428:10.231772;11:6.111482:2.467576:0.885639:58.535953;12:57.396271:0.690034:5.506417:4.407928 | ||
}} | }} |
Latest revision as of 09:51, 17 April 2012
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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mm9 | ||||||||||||
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