FF:11902-125F3: Difference between revisions
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{{f5samples | {{f5samples | ||
|DRA_sample_Accession=CAGE@ | |DRA_sample_Accession=CAGE@SAMD00004915 | ||
|accession_numbers=CAGE;DRX008569;DRR009441;DRZ000866;DRZ002251 | |accession_numbers=CAGE;DRX008569;DRR009441;DRZ000866;DRZ002251;DRZ012216;DRZ013601 | ||
|ancestors_in_anatomy_facet= | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000990,CL:0000255,CL:0000451,CL:0000453 | |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000990,CL:0000255,CL:0000451,CL:0000453 | ||
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase= | |data_phase=2 | ||
|datafreeze_phase= | |datafreeze_phase=2 | ||
|def= | |def= | ||
|expression_enrichment_score=chr6:391743..391759,+!p1@IRF4!2.96!912.78!IRF4;;chr11:47400078..47400106,-!p1@SPI1!2.29!192.12!SPI1;;chr20:20348740..20348757,+!p1@INSM1!2.25!175.78!INSM1;;chr9:102584262..102584276,+!p1@NR4A3!1.88!162.23!NR4A3;;chr19:50922187..50922204,+!p1@SPIB!1.79!61.25!SPIB;;chr4:185395590..185395627,-!p3@IRF2!1.67!56.87!IRF2;;chr1:25291475..25291511,-!p2@RUNX3!1.67!46.10!RUNX3;;chr1:25256756..25256774,-!p1@RUNX3!1.64!78.92!RUNX3;;chr2:61108808..61108821,+!p3@REL!1.64!52.88!REL;;chr2:61108695..61108753,+!p1@REL!1.62!265.20!REL;;chr9:102584128..102584144,+!p3@NR4A3!1.60!72.81!NR4A3;;chr6:106534192..106534224,+!p1@PRDM1!1.51!86.63!PRDM1;;chr9:102584159..102584174,+!p2@NR4A3!1.50!54.47!NR4A3;;chr2:68592406..68592424,+!p1@PLEK!1.50!30.29!PLEK;;chr1:157108130..157108173,-!p1@ETV3!1.47!198.10!ETV3;;chr19:45252008..45252024,+!p2@BCL3!1.44!85.30!BCL3;;chr7:50344251..50344288,+!p3@IKZF1!1.44!26.44!IKZF1;;chr10:104155480..104155534,+!p2@NFKB2!1.42!160.10!NFKB2;;chr2:61108771..61108789,+!p4@REL!1.41!37.20!REL;;chr7:50343634..50343717,+!p2@IKZF1!1.41!24.98!IKZF1;;chr2:192015701..192015743,-!p1@STAT4!1.37!30.43!STAT4;;chr7:50344289..50344323,+!p1@IKZF1!1.37!22.32!IKZF1;;chr9:102584241..102584261,+!p4@NR4A3!1.35!32.82!NR4A3;;chr6:106534230..106534254,+!p2@PRDM1!1.34!52.08!PRDM1;;chr1:151319654..151319698,-!p2@RFX5!1.33!43.58!RFX5;;chr11:47400062..47400077,-!p2@SPI1!1.33!20.59!SPI1;;chr12:11802753..11802834,+!p2@ETV6!1.31!93.27!ETV6;;chr5:71803177..71803255,-!p1@ZNF366!1.31!19.27!ZNF366;;chr2:8822176..8822196,+!p1@ID2!1.28!2478.99!ID2;;chr19:45579725..45579743,-!p1@ZNF296!1.28!78.92!ZNF296;;chr4:185395633..185395651,-!p2@IRF2!1.28!28.57!IRF2;;chr15:90544532..90544563,+!p1@ZNF710!1.27!34.94!ZNF710;;chr10:35484053..35484076,+!p1@CREM!1.26!42.38!CREM;;chr2:214015343..214015366,-!p3@IKZF2!1.25!16.87!IKZF2;;chr1:8935472..8935488,-!p20@ENO1!1.21!15.28!ENO1;;chr2:214015111..214015179,-!p1@IKZF2!1.20!26.71!IKZF2;;chr2:169312725..169312810,+!p1@CERS6!1.19!348.24!CERS6;;chr16:31885093..31885165,+!p1@ZNF267!1.18!213.25!ZNF267;;chr4:103422499..103422632,+!p1@NFKB1!1.16!275.16!NFKB1;;chr19:3574157..3574180,+!p4@HMG20B!1.15!13.29!HMG20B;;chr9:102584278..102584285,+!p5@NR4A3!1.15!13.29!NR4A3;;chr10:104155659..104155676,+!p4@NFKB2!1.13!15.68!NFKB2;;chr7:150102756..150102772,+!p5@ZNF775!1.13!12.36!ZNF775;;chr2:61108878..61108891,+!p5@REL!1.12!12.22!REL;;chr1:157108746..157108762,-!p4@ETV3!1.10!11.69!ETV3;;chrX:56258844..56258882,+!p1@KLF8!1.09!15.68!KLF8;;chr19:50432132..50432217,+!p2@ATF5!1.08!13.02!ATF5;;chr13:41593425..41593480,-!p1@ELF1!1.07!68.16!ELF1;;chr19:50432453..50432468,+!p1@ATF5!1.04!568.53!ATF5;;chr9:117150254..117150271,-!p1@AKNA!1.04!27.90!AKNA;;chr11:47237922..47237964,+!p4@DDB2!1.04!11.43!DDB2;;chr12:27485785..27485816,+!p1@ARNTL2!1.03!69.09!ARNTL2;;chr2:61108650..61108687,+!p2@REL!1.01!46.50!REL;;chr16:85932760..85932775,+!p1@IRF8!1.01!9.17!IRF8;;chr4:103478257..103478273,+!p28@NFKB1!1.00!9.03!NFKB1;;chr19:3574330..3574393,+!p2@HMG20B!1.00!8.90!HMG20B;;chr2:74229812..74229867,+!p1@TET3!0.99!22.32!TET3;;chr20:62462566..62462631,-!p1@ZBTB46!0.99!17.01!ZBTB46;;chr7:106810484..106810494,+!p4@HBP1!0.99!8.77!HBP1;;chr19:45504688..45504782,+!p1@RELB!0.98!53.28!RELB;;chr10:104154246..104154347,+!p3@NFKB2!0.98!53.28!NFKB2;;chr6:12012170..12012245,+!p1@HIVEP1!0.98!43.98!HIVEP1;;chr10:51572339..51572376,+!p4@NCOA4!0.98!19.53!NCOA4;;chr1:212782094..212782109,+!p1@ATF3!0.95!225.34!ATF3;;chr12:54785074..54785122,-!p2@ZNF385A!0.94!11.96!ZNF385A;;chr2:192015750..192015793,-!p2@STAT4!0.94!10.63!STAT4;;chr3:12330560..12330579,+!p1@PPARG!0.93!8.77!PPARG;;chrX:56258900..56258917,+!p4@KLF8!0.93!7.57!KLF8;;chr15:50647274..50647336,-!p1@GABPB1!0.92!52.88!GABPB1;;chr9:117160738..117160782,-!p2@AKNA!0.92!31.22!AKNA;;chr1:221052776..221052799,+!p1@HLX!0.91!13.29!HLX;;chr11:13299319..13299424,+!p1@ARNTL!0.90!74.14!ARNTL;;chr10:3827371..3827386,-!p2@KLF6!0.90!60.72!KLF6;;chr5:321810..321877,+!p1@AHRR!0.90!22.85!AHRR;;chr12:27485823..27485868,+!p2@ARNTL2!0.89!28.96!ARNTL2;;chr7:17338324..17338341,+!p3@AHR!0.89!23.65!AHR;;chr3:101546827..101546847,+!p2@NFKBIZ!0.89!9.83!NFKBIZ;;chr2:214014959..214015006,-!p4@IKZF2!0.88!6.64!IKZF2;;chr22:41697484..41697496,+!p3@ZC3H7B!0.87!8.37!ZC3H7B;;chr1:6684918..6684936,+!p2@THAP3!0.87!7.97!THAP3;;chr1:221052840..221052875,+!p4@HLX!0.86!7.57!HLX;;chr7:50343895..50343936,+!p5@IKZF1!0.86!6.24!IKZF1;;chr2:214016254..214016282,-!p7@IKZF2!0.84!5.98!IKZF2;;chr11:47399996..47400014,-!p4@SPI1!0.84!5.98!SPI1;;chr14:89883509..89883587,-!p2@FOXN3!0.83!42.52!FOXN3;;chr12:27485762..27485776,+!p3@ARNTL2!0.83!16.48!ARNTL2;;chr1:157108764..157108776,-!p7@ETV3!0.83!5.71!ETV3;;chr2:239148671..239148686,-!p1@HES6!0.82!22.06!HES6;;chr22:41697497..41697515,+!p2@ZC3H7B!0.82!16.21!ZC3H7B;;chr2:231090433..231090469,+!p1@SP140!0.82!5.58!SP140;;chr12:54778471..54778528,-!p1@ZNF385A!0.82!5.58!ZNF385A;;chr3:5021113..5021180,+!p1@BHLHE40!0.81!408.69!BHLHE40;;chr6:12012249..12012266,+!p5@HIVEP1!0.81!9.83!HIVEP1;;chr19:3573282.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| |expression_enrichment_score=chr6:391743..391759,+!p1@IRF4!2.96!912.78!IRF4;;chr11:47400078..47400106,-!p1@SPI1!2.29!192.12!SPI1;;chr20:20348740..20348757,+!p1@INSM1!2.25!175.78!INSM1;;chr9:102584262..102584276,+!p1@NR4A3!1.88!162.23!NR4A3;;chr19:50922187..50922204,+!p1@SPIB!1.79!61.25!SPIB;;chr4:185395590..185395627,-!p3@IRF2!1.67!56.87!IRF2;;chr1:25291475..25291511,-!p2@RUNX3!1.67!46.10!RUNX3;;chr1:25256756..25256774,-!p1@RUNX3!1.64!78.92!RUNX3;;chr2:61108808..61108821,+!p3@REL!1.64!52.88!REL;;chr2:61108695..61108753,+!p1@REL!1.62!265.20!REL;;chr9:102584128..102584144,+!p3@NR4A3!1.60!72.81!NR4A3;;chr6:106534192..106534224,+!p1@PRDM1!1.51!86.63!PRDM1;;chr9:102584159..102584174,+!p2@NR4A3!1.50!54.47!NR4A3;;chr2:68592406..68592424,+!p1@PLEK!1.50!30.29!PLEK;;chr1:157108130..157108173,-!p1@ETV3!1.47!198.10!ETV3;;chr19:45252008..45252024,+!p2@BCL3!1.44!85.30!BCL3;;chr7:50344251..50344288,+!p3@IKZF1!1.44!26.44!IKZF1;;chr10:104155480..104155534,+!p2@NFKB2!1.42!160.10!NFKB2;;chr2:61108771..61108789,+!p4@REL!1.41!37.20!REL;;chr7:50343634..50343717,+!p2@IKZF1!1.41!24.98!IKZF1;;chr2:192015701..192015743,-!p1@STAT4!1.37!30.43!STAT4;;chr7:50344289..50344323,+!p1@IKZF1!1.37!22.32!IKZF1;;chr9:102584241..102584261,+!p4@NR4A3!1.35!32.82!NR4A3;;chr6:106534230..106534254,+!p2@PRDM1!1.34!52.08!PRDM1;;chr1:151319654..151319698,-!p2@RFX5!1.33!43.58!RFX5;;chr11:47400062..47400077,-!p2@SPI1!1.33!20.59!SPI1;;chr12:11802753..11802834,+!p2@ETV6!1.31!93.27!ETV6;;chr5:71803177..71803255,-!p1@ZNF366!1.31!19.27!ZNF366;;chr2:8822176..8822196,+!p1@ID2!1.28!2478.99!ID2;;chr19:45579725..45579743,-!p1@ZNF296!1.28!78.92!ZNF296;;chr4:185395633..185395651,-!p2@IRF2!1.28!28.57!IRF2;;chr15:90544532..90544563,+!p1@ZNF710!1.27!34.94!ZNF710;;chr10:35484053..35484076,+!p1@CREM!1.26!42.38!CREM;;chr2:214015343..214015366,-!p3@IKZF2!1.25!16.87!IKZF2;;chr1:8935472..8935488,-!p20@ENO1!1.21!15.28!ENO1;;chr2:214015111..214015179,-!p1@IKZF2!1.20!26.71!IKZF2;;chr2:169312725..169312810,+!p1@CERS6!1.19!348.24!CERS6;;chr16:31885093..31885165,+!p1@ZNF267!1.18!213.25!ZNF267;;chr4:103422499..103422632,+!p1@NFKB1!1.16!275.16!NFKB1;;chr19:3574157..3574180,+!p4@HMG20B!1.15!13.29!HMG20B;;chr9:102584278..102584285,+!p5@NR4A3!1.15!13.29!NR4A3;;chr10:104155659..104155676,+!p4@NFKB2!1.13!15.68!NFKB2;;chr7:150102756..150102772,+!p5@ZNF775!1.13!12.36!ZNF775;;chr2:61108878..61108891,+!p5@REL!1.12!12.22!REL;;chr1:157108746..157108762,-!p4@ETV3!1.10!11.69!ETV3;;chrX:56258844..56258882,+!p1@KLF8!1.09!15.68!KLF8;;chr19:50432132..50432217,+!p2@ATF5!1.08!13.02!ATF5;;chr13:41593425..41593480,-!p1@ELF1!1.07!68.16!ELF1;;chr19:50432453..50432468,+!p1@ATF5!1.04!568.53!ATF5;;chr9:117150254..117150271,-!p1@AKNA!1.04!27.90!AKNA;;chr11:47237922..47237964,+!p4@DDB2!1.04!11.43!DDB2;;chr12:27485785..27485816,+!p1@ARNTL2!1.03!69.09!ARNTL2;;chr2:61108650..61108687,+!p2@REL!1.01!46.50!REL;;chr16:85932760..85932775,+!p1@IRF8!1.01!9.17!IRF8;;chr4:103478257..103478273,+!p28@NFKB1!1.00!9.03!NFKB1;;chr19:3574330..3574393,+!p2@HMG20B!1.00!8.90!HMG20B;;chr2:74229812..74229867,+!p1@TET3!0.99!22.32!TET3;;chr20:62462566..62462631,-!p1@ZBTB46!0.99!17.01!ZBTB46;;chr7:106810484..106810494,+!p4@HBP1!0.99!8.77!HBP1;;chr19:45504688..45504782,+!p1@RELB!0.98!53.28!RELB;;chr10:104154246..104154347,+!p3@NFKB2!0.98!53.28!NFKB2;;chr6:12012170..12012245,+!p1@HIVEP1!0.98!43.98!HIVEP1;;chr10:51572339..51572376,+!p4@NCOA4!0.98!19.53!NCOA4;;chr1:212782094..212782109,+!p1@ATF3!0.95!225.34!ATF3;;chr12:54785074..54785122,-!p2@ZNF385A!0.94!11.96!ZNF385A;;chr2:192015750..192015793,-!p2@STAT4!0.94!10.63!STAT4;;chr3:12330560..12330579,+!p1@PPARG!0.93!8.77!PPARG;;chrX:56258900..56258917,+!p4@KLF8!0.93!7.57!KLF8;;chr15:50647274..50647336,-!p1@GABPB1!0.92!52.88!GABPB1;;chr9:117160738..117160782,-!p2@AKNA!0.92!31.22!AKNA;;chr1:221052776..221052799,+!p1@HLX!0.91!13.29!HLX;;chr11:13299319..13299424,+!p1@ARNTL!0.90!74.14!ARNTL;;chr10:3827371..3827386,-!p2@KLF6!0.90!60.72!KLF6;;chr5:321810..321877,+!p1@AHRR!0.90!22.85!AHRR;;chr12:27485823..27485868,+!p2@ARNTL2!0.89!28.96!ARNTL2;;chr7:17338324..17338341,+!p3@AHR!0.89!23.65!AHR;;chr3:101546827..101546847,+!p2@NFKBIZ!0.89!9.83!NFKBIZ;;chr2:214014959..214015006,-!p4@IKZF2!0.88!6.64!IKZF2;;chr22:41697484..41697496,+!p3@ZC3H7B!0.87!8.37!ZC3H7B;;chr1:6684918..6684936,+!p2@THAP3!0.87!7.97!THAP3;;chr1:221052840..221052875,+!p4@HLX!0.86!7.57!HLX;;chr7:50343895..50343936,+!p5@IKZF1!0.86!6.24!IKZF1;;chr2:214016254..214016282,-!p7@IKZF2!0.84!5.98!IKZF2;;chr11:47399996..47400014,-!p4@SPI1!0.84!5.98!SPI1;;chr14:89883509..89883587,-!p2@FOXN3!0.83!42.52!FOXN3;;chr12:27485762..27485776,+!p3@ARNTL2!0.83!16.48!ARNTL2;;chr1:157108764..157108776,-!p7@ETV3!0.83!5.71!ETV3;;chr2:239148671..239148686,-!p1@HES6!0.82!22.06!HES6;;chr22:41697497..41697515,+!p2@ZC3H7B!0.82!16.21!ZC3H7B;;chr2:231090433..231090469,+!p1@SP140!0.82!5.58!SP140;;chr12:54778471..54778528,-!p1@ZNF385A!0.82!5.58!ZNF385A;;chr3:5021113..5021180,+!p1@BHLHE40!0.81!408.69!BHLHE40;;chr6:12012249..12012266,+!p5@HIVEP1!0.81!9.83!HIVEP1;;chr19:3573282..3573289,+!p5@HMG20B!0.81!6.91!HMG20B;;chr10:51572408..51572454,+!p3@NCOA4!0.80!33.61!NCOA4;;chr19:36391434..36391450,-!p1@NFKBID!0.80!11.03!NFKBID;;chr1:10754477..10754517,-!p1@CASZ1!0.80!9.17!CASZ1;;chr17:40540484..40540537,-!p2@STAT3!0.79!53.68!STAT3;;chr2:70142232..70142251,+!p1@MXD1!0.79!31.62!MXD1;;chr2:208031943..208031978,-!p5@KLF7!0.79!7.17!KLF7;;chr2:68592394..68592405,+!p2@PLEK!0.79!5.18!PLEK;;chr16:1429010..1429038,-!p5@UNKL!0.79!5.18!UNKL;;chr17:36861675..36861697,+!p3@MLLT6!0.78!12.49!MLLT6;;chr8:81397846..81397860,+!p3@ZBTB10!0.78!6.38!ZBTB10;;chr2:231090471..231090504,+!p2@SP140!0.78!5.05!SP140;;chr19:12476443..12476467,-!p1@ZNF442!0.77!8.37!ZNF442;;chr1:221052733..221052749,+!p2@HLX!0.77!6.51!HLX;;chr19:3572925..3573014,+!p1@HMG20B!0.76!154.52!HMG20B;;chr3:178789622..178789633,-!p3@ZMAT3!0.76!9.70!ZMAT3;;chr1:157108180..157108193,-!p2@ETV3!0.75!27.10!ETV3;;chr11:47400032..47400043,-!p5@SPI1!0.75!4.65!SPI1;;chr11:47400045..47400060,-!p6@SPI1!0.75!4.65!SPI1;;chr6:44233252..44233296,-!p1@NFKBIE!0.74!49.43!NFKBIE;;chr14:75988771..75988826,+!p1@BATF!0.74!6.24!BATF;;chr10:8096631..8096660,+!p1@GATA3!0.74!5.58!GATA3;;chr6:157100031..157100112,+!p2@ARID1B!0.73!26.44!ARID1B;;chr22:21771656..21771662,+!p1@HIC2!0.73!4.38!HIC2;;chr1:157108728..157108744,-!p5@ETV3!0.73!4.38!ETV3;;chr21:30672433..30672464,+!p6@BACH1!0.73!4.38!BACH1;;chr19:20011744..20011770,+!p1@ZNF93!0.72!18.34!ZNF93;;chr11:65430554..65430579,-!p3@RELA!0.72!11.82!RELA;;chrX:56258811..56258838,+!p2@KLF8!0.72!5.85!KLF8;;chr9:126774018..126774055,+!p1@LHX2!0.72!4.25!LHX2;;chr20:46130619..46130664,+!p1@NCOA3!0.71!125.56!NCOA3;;chr2:48541789..48541874,+!p1@FOXN2!0.71!105.89!FOXN2;;chr1:14026671..14026705,+!p2@PRDM2!0.71!28.30!PRDM2;;chr2:178128250..178128293,-!p6@NFE2L2!0.71!11.29!NFE2L2;;chr6:157098579..157098634,+!p4@ARID1B!0.71!10.10!ARID1B;;chr3:107318157..107318172,+!p6@BBX!0.71!6.11!BBX;;chr4:185395191..185395226,-!p4@IRF2!0.71!5.98!IRF2;;chr2:214015379..214015410,-!p9@IKZF2!0.71!4.12!IKZF2;;chrX:49121165..49121179,-!p1@FOXP3!0.71!4.12!FOXP3;;chr10:3827389..3827408,-!p1@KLF6!0.70!349.30!KLF6;;chr6:168227552..168227609,+!p1@MLLT4!0.70!37.20!MLLT4;;chr6:144385698..144385742,-!p2@PLAGL1!0.70!5.05!PLAGL1;;chr10:35484090..35484104,+!p6@CREM!0.70!3.99!CREM;;chr19:22034784..22034801,-!p4@ZNF43!0.70!3.99!ZNF43;;chr1:6479968..6479986,-!p1@HES2!0.70!3.99!HES2;;chr3:178789566..178789620,-!p1@ZMAT3!0.69!79.32!ZMAT3;;chr3:141121164..141121249,+!p1@ZBTB38!0.69!76.00!ZBTB38;;chr19:53868940..53868990,+!p1@ZNF525,p2@ZNF765!0.69!12.22!ZNF525;;chr19:20011775..20011800,+!p2@ZNF93!0.69!7.44!ZNF93;;chr14:74226961..74227020,-!p1@C14orf43!0.68!28.70!C14orf43;;chr7:128577972..128578047,+!p1@IRF5!0.68!6.38!IRF5;;chr3:141121847..141121868,+!p5@ZBTB38!0.68!6.11!ZBTB38;;chr19:37019136..37019178,-!p1@ZNF260!0.67!34.28!ZNF260;;chr22:42666593..42666623,-!p@chr22:42666593..42666623,-!0.67!9.30!TCF20;;chr20:50159198..50159299,-!p1@NFATC2!0.67!5.71!NFATC2;;chr8:81397876..81397898,+!p5@ZBTB10!0.67!4.52!ZBTB10;;chr15:85144307..85144329,+!p2@ZSCAN2!0.67!4.25!ZSCAN2;;chr3:71114563..71114584,-!p49@FOXP1!0.67!3.72!FOXP1;;chr19:45251943..45252006,+!p1@BCL3!0.66!110.14!BCL3;;chrX:66763815..66763854,+!p2@AR!0.66!4.92!AR;;chr1:221052994..221053008,+!p6@HLX!0.66!4.38!HLX;;chr2:214013461..214013517,-!p6@IKZF2!0.66!3.59!IKZF2;;chr19:23869970..23869991,-!p1@ZNF675!0.65!15.01!ZNF675;;chrX:70585978..70586012,+!p3@TAF1!0.64!4.38!TAF1;;chr10:3824646..3824677,-!p9@KLF6!0.64!3.32!KLF6;;chr15:31619013..31619095,+!p1@KLF13!0.63!91.54!KLF13;;chr3:178789522..178789564,-!p2@ZMAT3!0.63!28.57!ZMAT3;;chr15:85144229..85144273,+!p1@ZSCAN2!0.63!20.73!ZSCAN2;;chr6:7108855..7108903,+!p5@RREB1!0.63!8.24!RREB1;;chr12:6798731..6798751,-!p4@ZNF384!0.63!5.45!ZNF384;;chr3:178789993..178790049,-!p5@ZMAT3!0.63!5.05!ZMAT3;;chr19:12476469..12476509,-!p2@ZNF442!0.62!5.85!ZNF442;;chr17:79881332..79881348,-!p3@MAFG!0.62!4.92!MAFG;;chr2:61108689..61108694,+!p6@REL!0.62!4.12!REL;;chr1:151319283..151319314,-!p4@RFX5!0.62!3.59!RFX5;;chr2:113977697..113977733,-!p6@PAX8!0.62!3.19!PAX8;;chr2:214017053..214017065,-!p16@IKZF2!0.62!3.19!IKZF2;;chr11:47237987..47237998,+!p5@DDB2!0.62!3.19!DDB2;;chr14:89883412..89883478,-!p3@FOXN3!0.61!11.29!FOXN3;;chr6:109804367..109804402,-!p2@ZBTB24!0.61!10.23!ZBTB24;;chr4:103422471..103422495,+!p2@NFKB1!0.61!9.70!NFKB1;;chr19:37341160..37341194,-!p2@ZNF790!0.61!7.44!ZNF790;;chr4:103422457..103422469,+!p3@NFKB1!0.61!5.45!NFKB1;;chr11:47399947..47399961,-!p3@SPI1!0.61!3.06!SPI1;;chr1:40916143..40916164,+!p6@ZNF643!0.61!3.06!ZNF643;;chr2:238600933..238600985,+!p3@LRRFIP1!0.60!19.27!LRRFIP1;;chr3:5021191..5021202,+!p3@BHLHE40!0.60!9.30!BHLHE40;;chr12:6798692..6798723,-!p5@ZNF384!0.60!5.31!ZNF384;;chr12:72056773..72056796,+!p3@THAP2!0.60!4.12!THAP2;;chr12:27485889..27485900,+!p4@ARNTL2!0.60!3.72!ARNTL2;;chr4:106068026..106068084,+!p1@TET2!0.59!31.75!TET2;;chr11:65430586..65430593,-!p5@RELA!0.59!3.32!RELA;;chr3:5022272..5022321,+!p7@BHLHE40!0.59!2.92!BHLHE40;;chr17:40440359..40440386,+!p4@STAT5A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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000451;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000453;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000990 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134 | |ffid_belonging_in_development=CL:0000049,CL:0000134 | ||
|fonse_cell_line= | |fonse_cell_line= | ||
Line 41: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/migratory%2520langerhans%2520cells%252c%2520donor2.CNhs13536.11902-125F3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/migratory%2520langerhans%2520cells%252c%2520donor2.CNhs13536.11902-125F3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/migratory%2520langerhans%2520cells%252c%2520donor2.CNhs13536.11902-125F3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/migratory%2520langerhans%2520cells%252c%2520donor2.CNhs13536.11902-125F3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/migratory%2520langerhans%2520cells%252c%2520donor2.CNhs13536.11902-125F3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11902-125F3 | |id=FF:11902-125F3 | ||
|is_a=EFO:0002091;;FF:0011136 | |is_a=EFO:0002091;;FF:0011136 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs13536 | |library_id=CNhs13536 | ||
|library_id_phase_based= | |library_id_phase_based=2:CNhs13536 | ||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11902 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11902 | |||
|name=migratory langerhans cells, donor2 | |name=migratory langerhans cells, donor2 | ||
|namespace= | |namespace= | ||
Line 51: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13536,LSID1029,release012,COMPLETED | |profile_hcage=CNhs13536,LSID1029,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| ||
Line 90: | Line 101: | ||
|top_motifs=FOX{F1,F2,J1}:2.11912514691;HSF1,2:1.86867766768;NFKB1_REL_RELA:1.42773237227;TLX2:1.34860115029;FOXP3:1.31714257941;FOXA2:1.0524641118;FOXN1:1.05221812718;SPZ1:1.02415817948;CDX1,2,4:0.983811093108;SREBF1,2:0.92276189151;RUNX1..3:0.865054945317;POU1F1:0.826297836974;PAX6:0.814755211148;NFIX:0.809752064974;ATF5_CREB3:0.802327217886;STAT5{A,B}:0.76243402151;OCT4_SOX2{dimer}:0.735691071556;ATF2:0.715372851337;EVI1:0.689842923108;CRX:0.652620937206;STAT1,3:0.624680708232;IRF1,2:0.601378402736;NANOG{mouse}:0.597618846471;HMX1:0.547698874129;BPTF:0.541637412709;SPI1:0.53479718905;FOSL2:0.478038314971;GLI1..3:0.474809800264;ESR1:0.461016891131;PAX2:0.452225234606;ESRRA:0.445841320276;DMAP1_NCOR{1,2}_SMARC:0.442195363254;RORA:0.438074687539;ARID5B:0.422820240503;NFE2L2:0.413490705292;HOXA9_MEIS1:0.408438448698;ZNF148:0.396427907128;ELF1,2,4:0.332430385154;PRRX1,2:0.318923327677;FOXQ1:0.317153333956;ZBTB16:0.314194027045;NFE2:0.302616583118;SPIB:0.297208911799;RFX2..5_RFXANK_RFXAP:0.283097437128;HNF4A_NR2F1,2:0.247053471338;PDX1:0.240967826934;CUX2:0.227186783672;SRF:0.220981179517;NKX2-2,8:0.208093366735;AHR_ARNT_ARNT2:0.197055175108;NKX6-1,2:0.195251176244;LMO2:0.192296270928;NR5A1,2:0.172799179152;JUN:0.172344634439;IKZF2:0.168266083763;EP300:0.159047984224;ETS1,2:0.153142151885;FOX{D1,D2}:0.143158492495;LHX3,4:0.13067734128;HAND1,2:0.117929105535;ATF4:0.0998016819886;GATA6:0.0979397233002;TGIF1:0.0934463714812;SNAI1..3:0.0921174252838;TFCP2:0.0902806242142;NFE2L1:0.0711071769833;HMGA1,2:0.0696667744339;BACH2:0.0632624859365;NANOG:0.0487020033057;ZEB1:0.0321808127267;MYB:0.0164972613693;POU3F1..4:-0.0107409976278;SOX2:-0.0175914574477;ALX4:-0.0255881929362;HOX{A6,A7,B6,B7}:-0.0385550985313;SOX5:-0.0417766992761;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.045258672492;RXRA_VDR{dimer}:-0.0480429518305;ALX1:-0.0575514385926;CREB1:-0.074701828102;YY1:-0.0786596516068;ELK1,4_GABP{A,B1}:-0.0882803183824;NFY{A,B,C}:-0.0896125987243;AR:-0.100301779303;MYFfamily:-0.112552187167;ZFP161:-0.118034982975;SP1:-0.124870721616;ZNF238:-0.12521051949;SOX17:-0.149312709349;POU2F1..3:-0.1496441849;HNF1A:-0.199073227866;IRF7:-0.2008376394;STAT2,4,6:-0.207264305546;PBX1:-0.208702375494;MAZ:-0.216323294177;PAX4:-0.22648379633;FOS_FOS{B,L1}_JUN{B,D}:-0.231496752237;FOXM1:-0.236143338896;NKX2-3_NKX2-5:-0.238341639504;TAL1_TCF{3,4,12}:-0.269757922227;MYOD1:-0.282304413273;TP53:-0.291982087721;ONECUT1,2:-0.30638562061;NRF1:-0.312102625897;MEF2{A,B,C,D}:-0.318753305278;XCPE1{core}:-0.330774980779;MTE{core}:-0.333849149137;ZNF143:-0.337825392248;NFIL3:-0.348759973864;MAFB:-0.349055269339;PAX8:-0.384348138442;ATF6:-0.389040811355;LEF1_TCF7_TCF7L1,2:-0.397039916547;SMAD1..7,9:-0.406461470765;MED-1{core}:-0.416189390335;VSX1,2:-0.41968791781;NHLH1,2:-0.427601477613;BREu{core}:-0.446777883088;GFI1B:-0.451450309693;AIRE:-0.470357617122;NFATC1..3:-0.487363661335;POU5F1:-0.494785484829;RFX1:-0.497107304981;NR1H4:-0.49869780464;HLF:-0.509295571811;MYBL2:-0.512031672503;HBP1_HMGB_SSRP1_UBTF:-0.513524615336;NR6A1:-0.522261910166;NKX3-1:-0.538670335008;TBP:-0.555091206865;FOXO1,3,4:-0.561859817324;EGR1..3:-0.5651224926;FOXP1:-0.566449957435;TFAP4:-0.56984136571;ZIC1..3:-0.589111230235;FOX{I1,J2}:-0.593950985805;TBX4,5:-0.635184735644;TFDP1:-0.635841055338;E2F1..5:-0.650436414963;CEBPA,B_DDIT3:-0.654219379502;EN1,2:-0.660982052007;HOX{A5,B5}:-0.661138764673;MTF1:-0.667259352671;UFEwm:-0.684260846937;HOX{A4,D4}:-0.696666994341;NKX3-2:-0.69771508232;EBF1:-0.723074559552;ZBTB6:-0.725565475443;PAX5:-0.746021719344;TFAP2{A,C}:-0.755578690007;XBP1:-0.766031400019;PAX3,7:-0.783271853731;TFAP2B:-0.797993301298;NR3C1:-0.807621632702;HES1:-0.829920382;CDC5L:-0.851433407549;GATA4:-0.872191630023;SOX{8,9,10}:-0.879714939402;HIC1:-0.885626358388;TEAD1:-0.895112479255;GTF2A1,2:-0.901895838423;GZF1:-0.912601840659;MZF1:-0.921182233234;TLX1..3_NFIC{dimer}:-0.928608762784;HIF1A:-0.956420840255;RBPJ:-0.978392659974;ADNP_IRX_SIX_ZHX:-0.984617887559;PITX1..3:-0.995887254762;GFI1:-1.05088748461;TEF:-1.07990707506;IKZF1:-1.11239454767;NKX2-1,4:-1.12612238537;PATZ1:-1.14735102096;ZNF423:-1.1729079934;RREB1:-1.17455527995;GTF2I:-1.18260636138;TOPORS:-1.19293812844;REST:-1.20570283964;PPARG:-1.21601039574;KLF4:-1.22627063799;POU6F1:-1.30337124901;PRDM1:-1.3655153905;T:-1.42189206117;bHLH_family:-1.43241432493;ZNF384:-1.54125004232;GCM1,2:-1.55184430285;PAX1,9:-1.64485073464;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.64504483991;FOXL1:-1.77405316785;DBP:-1.78902363047;RXR{A,B,G}:-1.86713315567;FOXD3:-2.00700519208 | |top_motifs=FOX{F1,F2,J1}:2.11912514691;HSF1,2:1.86867766768;NFKB1_REL_RELA:1.42773237227;TLX2:1.34860115029;FOXP3:1.31714257941;FOXA2:1.0524641118;FOXN1:1.05221812718;SPZ1:1.02415817948;CDX1,2,4:0.983811093108;SREBF1,2:0.92276189151;RUNX1..3:0.865054945317;POU1F1:0.826297836974;PAX6:0.814755211148;NFIX:0.809752064974;ATF5_CREB3:0.802327217886;STAT5{A,B}:0.76243402151;OCT4_SOX2{dimer}:0.735691071556;ATF2:0.715372851337;EVI1:0.689842923108;CRX:0.652620937206;STAT1,3:0.624680708232;IRF1,2:0.601378402736;NANOG{mouse}:0.597618846471;HMX1:0.547698874129;BPTF:0.541637412709;SPI1:0.53479718905;FOSL2:0.478038314971;GLI1..3:0.474809800264;ESR1:0.461016891131;PAX2:0.452225234606;ESRRA:0.445841320276;DMAP1_NCOR{1,2}_SMARC:0.442195363254;RORA:0.438074687539;ARID5B:0.422820240503;NFE2L2:0.413490705292;HOXA9_MEIS1:0.408438448698;ZNF148:0.396427907128;ELF1,2,4:0.332430385154;PRRX1,2:0.318923327677;FOXQ1:0.317153333956;ZBTB16:0.314194027045;NFE2:0.302616583118;SPIB:0.297208911799;RFX2..5_RFXANK_RFXAP:0.283097437128;HNF4A_NR2F1,2:0.247053471338;PDX1:0.240967826934;CUX2:0.227186783672;SRF:0.220981179517;NKX2-2,8:0.208093366735;AHR_ARNT_ARNT2:0.197055175108;NKX6-1,2:0.195251176244;LMO2:0.192296270928;NR5A1,2:0.172799179152;JUN:0.172344634439;IKZF2:0.168266083763;EP300:0.159047984224;ETS1,2:0.153142151885;FOX{D1,D2}:0.143158492495;LHX3,4:0.13067734128;HAND1,2:0.117929105535;ATF4:0.0998016819886;GATA6:0.0979397233002;TGIF1:0.0934463714812;SNAI1..3:0.0921174252838;TFCP2:0.0902806242142;NFE2L1:0.0711071769833;HMGA1,2:0.0696667744339;BACH2:0.0632624859365;NANOG:0.0487020033057;ZEB1:0.0321808127267;MYB:0.0164972613693;POU3F1..4:-0.0107409976278;SOX2:-0.0175914574477;ALX4:-0.0255881929362;HOX{A6,A7,B6,B7}:-0.0385550985313;SOX5:-0.0417766992761;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.045258672492;RXRA_VDR{dimer}:-0.0480429518305;ALX1:-0.0575514385926;CREB1:-0.074701828102;YY1:-0.0786596516068;ELK1,4_GABP{A,B1}:-0.0882803183824;NFY{A,B,C}:-0.0896125987243;AR:-0.100301779303;MYFfamily:-0.112552187167;ZFP161:-0.118034982975;SP1:-0.124870721616;ZNF238:-0.12521051949;SOX17:-0.149312709349;POU2F1..3:-0.1496441849;HNF1A:-0.199073227866;IRF7:-0.2008376394;STAT2,4,6:-0.207264305546;PBX1:-0.208702375494;MAZ:-0.216323294177;PAX4:-0.22648379633;FOS_FOS{B,L1}_JUN{B,D}:-0.231496752237;FOXM1:-0.236143338896;NKX2-3_NKX2-5:-0.238341639504;TAL1_TCF{3,4,12}:-0.269757922227;MYOD1:-0.282304413273;TP53:-0.291982087721;ONECUT1,2:-0.30638562061;NRF1:-0.312102625897;MEF2{A,B,C,D}:-0.318753305278;XCPE1{core}:-0.330774980779;MTE{core}:-0.333849149137;ZNF143:-0.337825392248;NFIL3:-0.348759973864;MAFB:-0.349055269339;PAX8:-0.384348138442;ATF6:-0.389040811355;LEF1_TCF7_TCF7L1,2:-0.397039916547;SMAD1..7,9:-0.406461470765;MED-1{core}:-0.416189390335;VSX1,2:-0.41968791781;NHLH1,2:-0.427601477613;BREu{core}:-0.446777883088;GFI1B:-0.451450309693;AIRE:-0.470357617122;NFATC1..3:-0.487363661335;POU5F1:-0.494785484829;RFX1:-0.497107304981;NR1H4:-0.49869780464;HLF:-0.509295571811;MYBL2:-0.512031672503;HBP1_HMGB_SSRP1_UBTF:-0.513524615336;NR6A1:-0.522261910166;NKX3-1:-0.538670335008;TBP:-0.555091206865;FOXO1,3,4:-0.561859817324;EGR1..3:-0.5651224926;FOXP1:-0.566449957435;TFAP4:-0.56984136571;ZIC1..3:-0.589111230235;FOX{I1,J2}:-0.593950985805;TBX4,5:-0.635184735644;TFDP1:-0.635841055338;E2F1..5:-0.650436414963;CEBPA,B_DDIT3:-0.654219379502;EN1,2:-0.660982052007;HOX{A5,B5}:-0.661138764673;MTF1:-0.667259352671;UFEwm:-0.684260846937;HOX{A4,D4}:-0.696666994341;NKX3-2:-0.69771508232;EBF1:-0.723074559552;ZBTB6:-0.725565475443;PAX5:-0.746021719344;TFAP2{A,C}:-0.755578690007;XBP1:-0.766031400019;PAX3,7:-0.783271853731;TFAP2B:-0.797993301298;NR3C1:-0.807621632702;HES1:-0.829920382;CDC5L:-0.851433407549;GATA4:-0.872191630023;SOX{8,9,10}:-0.879714939402;HIC1:-0.885626358388;TEAD1:-0.895112479255;GTF2A1,2:-0.901895838423;GZF1:-0.912601840659;MZF1:-0.921182233234;TLX1..3_NFIC{dimer}:-0.928608762784;HIF1A:-0.956420840255;RBPJ:-0.978392659974;ADNP_IRX_SIX_ZHX:-0.984617887559;PITX1..3:-0.995887254762;GFI1:-1.05088748461;TEF:-1.07990707506;IKZF1:-1.11239454767;NKX2-1,4:-1.12612238537;PATZ1:-1.14735102096;ZNF423:-1.1729079934;RREB1:-1.17455527995;GTF2I:-1.18260636138;TOPORS:-1.19293812844;REST:-1.20570283964;PPARG:-1.21601039574;KLF4:-1.22627063799;POU6F1:-1.30337124901;PRDM1:-1.3655153905;T:-1.42189206117;bHLH_family:-1.43241432493;ZNF384:-1.54125004232;GCM1,2:-1.55184430285;PAX1,9:-1.64485073464;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.64504483991;FOXL1:-1.77405316785;DBP:-1.78902363047;RXR{A,B,G}:-1.86713315567;FOXD3:-2.00700519208 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11902-125F3;search_select_hide=table117:FF:11902-125F3 | |||
}} | }} |
Latest revision as of 18:28, 4 June 2020
Name: | migratory langerhans cells, donor2 |
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Species: | Human (Homo sapiens) |
Library ID: | CNhs13536 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13536
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13536
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0487 |
10 | 10 | 0.0526 |
100 | 100 | 0.659 |
101 | 101 | 0.451 |
102 | 102 | 0.427 |
103 | 103 | 0.0269 |
104 | 104 | 0.68 |
105 | 105 | 0.0837 |
106 | 106 | 0.00599 |
107 | 107 | 0.68 |
108 | 108 | 0.768 |
109 | 109 | 0.0329 |
11 | 11 | 0.158 |
110 | 110 | 0.397 |
111 | 111 | 0.0792 |
112 | 112 | 0.0304 |
113 | 113 | 0.897 |
114 | 114 | 0.0125 |
115 | 115 | 0.165 |
116 | 116 | 0.811 |
117 | 117 | 0.0128 |
118 | 118 | 0.181 |
119 | 119 | 0.0102 |
12 | 12 | 0.367 |
120 | 120 | 0.61 |
121 | 121 | 0.75 |
122 | 122 | 0.614 |
123 | 123 | 0.596 |
124 | 124 | 0.127 |
125 | 125 | 0.928 |
126 | 126 | 0.0747 |
127 | 127 | 0.0855 |
128 | 128 | 0.0157 |
129 | 129 | 0.19 |
13 | 13 | 0.0898 |
130 | 130 | 0.837 |
131 | 131 | 0.659 |
132 | 132 | 0.57 |
133 | 133 | 0.905 |
134 | 134 | 0.949 |
135 | 135 | 0.353 |
136 | 136 | 0.392 |
137 | 137 | 0.0247 |
138 | 138 | 0.809 |
139 | 139 | 0.237 |
14 | 14 | 0.553 |
140 | 140 | 0.0104 |
141 | 141 | 0.924 |
142 | 142 | 0.2 |
143 | 143 | 0.119 |
144 | 144 | 0.691 |
145 | 145 | 0.366 |
146 | 146 | 0.684 |
147 | 147 | 0.286 |
148 | 148 | 0.0214 |
149 | 149 | 0.831 |
15 | 15 | 0.0261 |
150 | 150 | 0.368 |
151 | 151 | 0.621 |
152 | 152 | 0.45 |
153 | 153 | 0.532 |
154 | 154 | 0.524 |
155 | 155 | 0.0659 |
156 | 156 | 0.498 |
157 | 157 | 0.708 |
158 | 158 | 0.298 |
159 | 159 | 0.297 |
16 | 16 | 0.319 |
160 | 160 | 0.934 |
161 | 161 | 0.22 |
162 | 162 | 0.651 |
163 | 163 | 0.98 |
164 | 164 | 0.617 |
165 | 165 | 0.141 |
166 | 166 | 0.68 |
167 | 167 | 0.849 |
168 | 168 | 0.649 |
169 | 169 | 0.112 |
17 | 17 | 0.691 |
18 | 18 | 0.345 |
19 | 19 | 0.837 |
2 | 2 | 0.917 |
20 | 20 | 0.276 |
21 | 21 | 0.606 |
22 | 22 | 0.536 |
23 | 23 | 0.249 |
24 | 24 | 0.77 |
25 | 25 | 0.284 |
26 | 26 | 0.219 |
27 | 27 | 0.8 |
28 | 28 | 0.476 |
29 | 29 | 0.11 |
3 | 3 | 0.138 |
30 | 30 | 0.592 |
31 | 31 | 0.624 |
32 | 32 | 0.285 |
33 | 33 | 0.359 |
34 | 34 | 0.817 |
35 | 35 | 0.488 |
36 | 36 | 0.118 |
37 | 37 | 0.201 |
38 | 38 | 0.347 |
39 | 39 | 0.969 |
4 | 4 | 0.333 |
40 | 40 | 0.14 |
41 | 41 | 0.161 |
42 | 42 | 0.307 |
43 | 43 | 0.0794 |
44 | 44 | 0.0142 |
45 | 45 | 0.739 |
46 | 46 | 0.131 |
47 | 47 | 0.219 |
48 | 48 | 0.308 |
49 | 49 | 0.0668 |
5 | 5 | 0.548 |
50 | 50 | 0.956 |
51 | 51 | 0.304 |
52 | 52 | 0.0787 |
53 | 53 | 0.744 |
54 | 54 | 0.299 |
55 | 55 | 0.509 |
56 | 56 | 0.874 |
57 | 57 | 0.232 |
58 | 58 | 0.0577 |
59 | 59 | 0.185 |
6 | 6 | 0.939 |
60 | 60 | 0.0377 |
61 | 61 | 0.414 |
62 | 62 | 0.0483 |
63 | 63 | 0.466 |
64 | 64 | 0.483 |
65 | 65 | 0.371 |
66 | 66 | 0.0884 |
67 | 67 | 0.168 |
68 | 68 | 0.94 |
69 | 69 | 0.763 |
7 | 7 | 0.0647 |
70 | 70 | 0.0114 |
71 | 71 | 0.123 |
72 | 72 | 0.215 |
73 | 73 | 0.451 |
74 | 74 | 0.656 |
75 | 75 | 0.13 |
76 | 76 | 0.426 |
77 | 77 | 0.952 |
78 | 78 | 0.0488 |
79 | 79 | 0.971 |
8 | 8 | 0.463 |
80 | 80 | 0.739 |
81 | 81 | 0.382 |
82 | 82 | 0.157 |
83 | 83 | 0.147 |
84 | 84 | 0.299 |
85 | 85 | 0.221 |
86 | 86 | 0.255 |
87 | 87 | 0.0429 |
88 | 88 | 0.163 |
89 | 89 | 0.427 |
9 | 9 | 0.577 |
90 | 90 | 0.015 |
91 | 91 | 0.499 |
92 | 92 | 0.469 |
93 | 93 | 0.545 |
94 | 94 | 0.0657 |
95 | 95 | 0.0524 |
96 | 96 | 0.01 |
97 | 97 | 0.843 |
98 | 98 | 0.213 |
99 | 99 | 0.566 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13536
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011136 human migratory langerhans cells sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000990 (conventional dendritic cell)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000453 (Langerhans cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011136 (human migratory langerhans cells sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)