FF:11690-122I7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004687 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008321;DRR009193;DRZ000618;DRZ002003;DRZ011968;DRZ013353 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000970,UBERON:0000019,UBERON:0000483,UBERON:0000033,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000047,UBERON:0000062,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0000490,UBERON:0010077,UBERON:0005389,UBERON:0000020,UBERON:0010371,UBERON:0007625,UBERON:0000484,UBERON:0001032,UBERON:0010317,UBERON:0000965,UBERON:0001803,UBERON:0004088,UBERON:0000153,UBERON:0007811,UBERON:0002104,UBERON:0001801,UBERON:0004456,UBERON:0001456,UBERON:0010230 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000075,CL:0000066,CL:0002371,CL:0000325,CL:0000255,CL:0000306,CL:0002222,CL:0002224 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000085 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor3.CNhs12572.11690-122I7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor3.CNhs12572.11690-122I7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor3.CNhs12572.11690-122I7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor3.CNhs12572.11690-122I7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Lens%2520Epithelial%2520Cells%252c%2520donor3.CNhs12572.11690-122I7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11690-122I7 | |id=FF:11690-122I7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000085 | ||
|is_obsolete= | |||
|library_id=CNhs12572 | |||
|library_id_phase_based=2:CNhs12572 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11690 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11690 | |||
|name=Lens Epithelial Cells, donor3 | |name=Lens Epithelial Cells, donor3 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 60: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12572,LSID917,release012,COMPLETED | |profile_hcage=CNhs12572,LSID917,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.0241060230789031,0,0,0,0,0.127320149095055,0,-0.069046546363805,-0.21687890624462,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.022273701683784,0,0,0.0241060230789031,0,0,-0.0979578962680575,0,0,-0.084744543621056,0,0,0,0,0,0,0,0,0,0,0.231584817481691,0,-0.0615196303241338,0,0,0,0,0,0,0,0,0.0673877153954029,0,0,0,0.167209420417964,0,0,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0.0482120461578062,0,0,0,0,0,0,0,0,-0.145043907048156,0.0241060230789031,0,0,0,0,0.00768108921356281,0.0482120461578062,0,0,0,0.121396853759977,-0.0311378853911599,0,0.287638179181441,0,0,-0.0980353512377064,-0.138477200800895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,-0.0485707522809905,-0.117373513372051,0,0,-0.00463600691831079,0,0,0 | |||
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| |||
|rna_box=122 | |rna_box=122 | ||
|rna_catalog_number=SC6555 | |rna_catalog_number=SC6555 | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.57522296108789e-213!GO:0005737;cytoplasm;4.67245727837567e-192!GO:0043226;organelle;1.9061947696917e-167!GO:0043229;intracellular organelle;3.47342095363635e-167!GO:0043231;intracellular membrane-bound organelle;2.95280416985213e-164!GO:0043227;membrane-bound organelle;6.36051866328844e-164!GO:0044444;cytoplasmic part;4.76665140578515e-137!GO:0044422;organelle part;1.95829159124903e-123!GO:0044446;intracellular organelle part;5.71727597920564e-122!GO:0032991;macromolecular complex;2.35151587725079e-85!GO:0005515;protein binding;1.60185603673563e-84!GO:0030529;ribonucleoprotein complex;1.32313339097972e-75!GO:0044238;primary metabolic process;2.62240462892691e-75!GO:0044237;cellular metabolic process;1.06408521615179e-73!GO:0043170;macromolecule metabolic process;1.25598541610186e-68!GO:0043233;organelle lumen;5.60741668884477e-66!GO:0031974;membrane-enclosed lumen;5.60741668884477e-66!GO:0003723;RNA binding;5.89599105321038e-64!GO:0044428;nuclear part;5.4973313765483e-59!GO:0005739;mitochondrion;2.13012918447333e-54!GO:0005634;nucleus;6.64460380729235e-54!GO:0019538;protein metabolic process;5.02929787261537e-53!GO:0031090;organelle membrane;9.19294110762451e-53!GO:0016043;cellular component organization and biogenesis;3.19471752765823e-52!GO:0044260;cellular macromolecule metabolic process;8.54649880110596e-48!GO:0005840;ribosome;1.71769444983945e-47!GO:0033036;macromolecule localization;1.77337616076777e-47!GO:0044267;cellular protein metabolic process;4.27533312032968e-47!GO:0015031;protein transport;6.76461874289988e-47!GO:0006412;translation;1.5495188646369e-46!GO:0008104;protein localization;2.43105021551528e-44!GO:0045184;establishment of protein localization;3.2000037507864e-44!GO:0009058;biosynthetic process;2.47639729906554e-43!GO:0043234;protein complex;2.81989830442611e-43!GO:0003735;structural constituent of ribosome;5.61550565028919e-42!GO:0009059;macromolecule biosynthetic process;4.98815380107395e-40!GO:0006396;RNA processing;6.42539207733806e-39!GO:0031981;nuclear lumen;3.94207791514365e-38!GO:0044249;cellular biosynthetic process;5.51167738217381e-38!GO:0044429;mitochondrial part;2.51856260863643e-37!GO:0033279;ribosomal subunit;7.95826498094747e-37!GO:0005829;cytosol;1.14611846566449e-36!GO:0046907;intracellular transport;1.70145909068528e-36!GO:0031967;organelle envelope;6.78808377160284e-35!GO:0031975;envelope;1.30027797478176e-34!GO:0043283;biopolymer metabolic process;2.90642729008696e-34!GO:0016071;mRNA metabolic process;2.42684694635787e-32!GO:0010467;gene expression;4.447841298591e-31!GO:0006886;intracellular protein transport;1.51256375245148e-30!GO:0008380;RNA splicing;1.3619018734413e-29!GO:0065003;macromolecular complex assembly;4.89456058725977e-29!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.55087181947614e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.64102040187154e-28!GO:0006996;organelle organization and biogenesis;8.11632666231963e-28!GO:0006397;mRNA processing;1.62511396775341e-27!GO:0022607;cellular component assembly;5.44872510826156e-26!GO:0012505;endomembrane system;3.347354220875e-25!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.78794698607166e-24!GO:0005740;mitochondrial envelope;2.21765872353141e-24!GO:0005783;endoplasmic reticulum;4.26372702088239e-24!GO:0005654;nucleoplasm;4.89720465110133e-24!GO:0051649;establishment of cellular localization;1.99194531745699e-23!GO:0043228;non-membrane-bound organelle;2.26951264683278e-23!GO:0043232;intracellular non-membrane-bound organelle;2.26951264683278e-23!GO:0051641;cellular localization;2.26951264683278e-23!GO:0044445;cytosolic part;3.80876963761706e-23!GO:0031966;mitochondrial membrane;5.59748004623643e-23!GO:0006457;protein folding;1.00616703229386e-22!GO:0019866;organelle inner membrane;1.07943920622867e-22!GO:0005743;mitochondrial inner membrane;1.81999245953285e-21!GO:0005794;Golgi apparatus;2.61592244578283e-21!GO:0005681;spliceosome;1.58430273940483e-20!GO:0044451;nucleoplasm part;3.28917026228478e-20!GO:0006119;oxidative phosphorylation;5.88924857320412e-20!GO:0048770;pigment granule;1.42656130454894e-19!GO:0042470;melanosome;1.42656130454894e-19!GO:0022618;protein-RNA complex assembly;2.70192262211063e-19!GO:0016462;pyrophosphatase activity;2.85170294189373e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.35657650314703e-19!GO:0015935;small ribosomal subunit;3.76098166817581e-19!GO:0044432;endoplasmic reticulum part;4.80014218133762e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;5.6191756658447e-19!GO:0000166;nucleotide binding;8.00462557001114e-19!GO:0017111;nucleoside-triphosphatase activity;1.57015793625983e-18!GO:0015934;large ribosomal subunit;1.59438011383852e-18!GO:0008134;transcription factor binding;1.73053650242524e-17!GO:0044455;mitochondrial membrane part;2.05472001008216e-17!GO:0016874;ligase activity;3.1764669642797e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;1.5931206635e-16!GO:0006512;ubiquitin cycle;1.65611154558161e-16!GO:0006259;DNA metabolic process;3.04890260974082e-16!GO:0019941;modification-dependent protein catabolic process;3.46183290055448e-16!GO:0043632;modification-dependent macromolecule catabolic process;3.46183290055448e-16!GO:0044257;cellular protein catabolic process;3.88196134418488e-16!GO:0006511;ubiquitin-dependent protein catabolic process;5.00061236445928e-16!GO:0008135;translation factor activity, nucleic acid binding;6.65194831699039e-16!GO:0048193;Golgi vesicle transport;7.00205436652141e-16!GO:0031980;mitochondrial lumen;7.60182656264126e-16!GO:0005759;mitochondrial matrix;7.60182656264126e-16!GO:0051082;unfolded protein binding;8.81687465137112e-16!GO:0016192;vesicle-mediated transport;1.00320046073434e-15!GO:0044265;cellular macromolecule catabolic process;1.26421046578869e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.31224560515536e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.19968437908685e-15!GO:0043412;biopolymer modification;4.66796940786604e-15!GO:0005730;nucleolus;8.9325667423544e-15!GO:0005746;mitochondrial respiratory chain;1.2461582889741e-14!GO:0043285;biopolymer catabolic process;2.42985445823642e-14!GO:0003676;nucleic acid binding;2.60250335758968e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.65577062350713e-14!GO:0006605;protein targeting;4.11436197491008e-14!GO:0006464;protein modification process;4.64027804883767e-14!GO:0030163;protein catabolic process;5.11238477140655e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.80314481087363e-14!GO:0009057;macromolecule catabolic process;2.34330617465182e-13!GO:0003743;translation initiation factor activity;3.30515205165576e-13!GO:0050136;NADH dehydrogenase (quinone) activity;3.40389681198035e-13!GO:0003954;NADH dehydrogenase activity;3.40389681198035e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.40389681198035e-13!GO:0032553;ribonucleotide binding;3.86761451553138e-13!GO:0032555;purine ribonucleotide binding;3.86761451553138e-13!GO:0006413;translational initiation;3.94595256127423e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.92594093958905e-13!GO:0005789;endoplasmic reticulum membrane;2.00626517066883e-12!GO:0017076;purine nucleotide binding;2.1677563593154e-12!GO:0051186;cofactor metabolic process;2.4244602284337e-12!GO:0005793;ER-Golgi intermediate compartment;3.16399196626219e-12!GO:0005761;mitochondrial ribosome;6.81643827561823e-12!GO:0000313;organellar ribosome;6.81643827561823e-12!GO:0044248;cellular catabolic process;1.02760860409758e-11!GO:0042775;organelle ATP synthesis coupled electron transport;1.33992465906141e-11!GO:0042773;ATP synthesis coupled electron transport;1.33992465906141e-11!GO:0030964;NADH dehydrogenase complex (quinone);1.88407966050543e-11!GO:0045271;respiratory chain complex I;1.88407966050543e-11!GO:0005747;mitochondrial respiratory chain complex I;1.88407966050543e-11!GO:0003712;transcription cofactor activity;2.25517509099065e-11!GO:0043687;post-translational protein modification;3.03686042147773e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.15194596086159e-11!GO:0005635;nuclear envelope;3.3450718857332e-11!GO:0007049;cell cycle;4.04382364177316e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.86649982101206e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;6.53720681171994e-11!GO:0000375;RNA splicing, via transesterification reactions;6.53720681171994e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;6.53720681171994e-11!GO:0048523;negative regulation of cellular process;8.65520618674725e-11!GO:0016070;RNA metabolic process;9.29936167371865e-11!GO:0006446;regulation of translational initiation;9.33715775421852e-11!GO:0012501;programmed cell death;9.33715775421852e-11!GO:0008565;protein transporter activity;1.3310399724828e-10!GO:0044431;Golgi apparatus part;1.747474460498e-10!GO:0031965;nuclear membrane;1.747474460498e-10!GO:0006915;apoptosis;1.91799116742508e-10!GO:0016604;nuclear body;4.43469378276631e-10!GO:0009055;electron carrier activity;4.57637843566638e-10!GO:0006732;coenzyme metabolic process;4.80563311728041e-10!GO:0042254;ribosome biogenesis and assembly;6.4050757260076e-10!GO:0008219;cell death;1.13657485696115e-09!GO:0016265;death;1.13657485696115e-09!GO:0005788;endoplasmic reticulum lumen;1.28986303096186e-09!GO:0003924;GTPase activity;1.88964053100908e-09!GO:0008639;small protein conjugating enzyme activity;1.88964053100908e-09!GO:0030120;vesicle coat;1.93163901084129e-09!GO:0030662;coated vesicle membrane;1.93163901084129e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.00058188245925e-09!GO:0005524;ATP binding;2.54685306260925e-09!GO:0048475;coated membrane;2.84494994908481e-09!GO:0030117;membrane coat;2.84494994908481e-09!GO:0019787;small conjugating protein ligase activity;2.89858999609548e-09!GO:0016023;cytoplasmic membrane-bound vesicle;2.96536970159316e-09!GO:0004842;ubiquitin-protein ligase activity;3.00500291058733e-09!GO:0031988;membrane-bound vesicle;3.01828723167661e-09!GO:0048519;negative regulation of biological process;3.02749767382268e-09!GO:0006913;nucleocytoplasmic transport;3.44882518859557e-09!GO:0009259;ribonucleotide metabolic process;4.06612536614407e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;4.08451137180602e-09!GO:0032559;adenyl ribonucleotide binding;4.33403647466257e-09!GO:0044453;nuclear membrane part;4.88415112620778e-09!GO:0006888;ER to Golgi vesicle-mediated transport;5.89532588651277e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.55117291517889e-09!GO:0051169;nuclear transport;7.77525721908262e-09!GO:0006163;purine nucleotide metabolic process;9.94126606879936e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.22311454236937e-08!GO:0006323;DNA packaging;1.51096106203406e-08!GO:0016607;nuclear speck;1.55990374979161e-08!GO:0016887;ATPase activity;1.73640546762082e-08!GO:0009150;purine ribonucleotide metabolic process;1.76604846296824e-08!GO:0042623;ATPase activity, coupled;1.96060371115583e-08!GO:0051276;chromosome organization and biogenesis;2.33496889876997e-08!GO:0030554;adenyl nucleotide binding;2.52559932827408e-08!GO:0004386;helicase activity;2.68093070226429e-08!GO:0006164;purine nucleotide biosynthetic process;2.82249726525408e-08!GO:0031982;vesicle;3.18597031068969e-08!GO:0031410;cytoplasmic vesicle;3.44058100484129e-08!GO:0009260;ribonucleotide biosynthetic process;3.98196602802031e-08!GO:0051246;regulation of protein metabolic process;4.49165699207988e-08!GO:0009152;purine ribonucleotide biosynthetic process;4.80180790377286e-08!GO:0005768;endosome;4.93466582499298e-08!GO:0016881;acid-amino acid ligase activity;5.64272458767902e-08!GO:0006974;response to DNA damage stimulus;6.37714048881671e-08!GO:0000139;Golgi membrane;6.71332377567796e-08!GO:0006461;protein complex assembly;6.76236877741545e-08!GO:0015986;ATP synthesis coupled proton transport;9.71955796349518e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.71955796349518e-08!GO:0006366;transcription from RNA polymerase II promoter;1.09248633324534e-07!GO:0008026;ATP-dependent helicase activity;1.10019177352978e-07!GO:0022402;cell cycle process;1.14653846742667e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.60385712968268e-07!GO:0009060;aerobic respiration;1.65214487087062e-07!GO:0009141;nucleoside triphosphate metabolic process;1.88271233616495e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.16058378066732e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.16058378066732e-07!GO:0017038;protein import;2.42379038721018e-07!GO:0005798;Golgi-associated vesicle;2.43689150013903e-07!GO:0006399;tRNA metabolic process;2.68417138967562e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.71515602282301e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.71515602282301e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.75000949578941e-07!GO:0004812;aminoacyl-tRNA ligase activity;2.75000949578941e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.75000949578941e-07!GO:0005643;nuclear pore;2.82514548444433e-07!GO:0031252;leading edge;3.24283505861455e-07!GO:0032446;protein modification by small protein conjugation;3.35248525439134e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.6504434878533e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.6504434878533e-07!GO:0019829;cation-transporting ATPase activity;3.8878992342281e-07!GO:0050794;regulation of cellular process;3.99645141334533e-07!GO:0045333;cellular respiration;4.23020757267751e-07!GO:0043038;amino acid activation;4.35258738650268e-07!GO:0006418;tRNA aminoacylation for protein translation;4.35258738650268e-07!GO:0043039;tRNA aminoacylation;4.35258738650268e-07!GO:0065002;intracellular protein transport across a membrane;4.88296431873224e-07!GO:0005525;GTP binding;5.5959047503209e-07!GO:0016567;protein ubiquitination;5.67277243446728e-07!GO:0043067;regulation of programmed cell death;5.87726372705598e-07!GO:0043069;negative regulation of programmed cell death;6.73252472588555e-07!GO:0009056;catabolic process;6.81858847930272e-07!GO:0065004;protein-DNA complex assembly;7.02278285043817e-07!GO:0005667;transcription factor complex;7.26577652327611e-07!GO:0042981;regulation of apoptosis;8.12089094649347e-07!GO:0003714;transcription corepressor activity;1.00608505924105e-06!GO:0007005;mitochondrion organization and biogenesis;1.10912988343989e-06!GO:0016853;isomerase activity;1.52554558111137e-06!GO:0043066;negative regulation of apoptosis;1.61608963013278e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.80047074151435e-06!GO:0051726;regulation of cell cycle;1.90230340366084e-06!GO:0046034;ATP metabolic process;1.98410598898612e-06!GO:0006281;DNA repair;1.99895535870928e-06!GO:0000074;regulation of progression through cell cycle;2.02697814596649e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.0400085264849e-06!GO:0051188;cofactor biosynthetic process;2.04111291763659e-06!GO:0006754;ATP biosynthetic process;2.24702700857199e-06!GO:0006753;nucleoside phosphate metabolic process;2.24702700857199e-06!GO:0006403;RNA localization;2.27215015853956e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.44073029882357e-06!GO:0006364;rRNA processing;2.71587633709042e-06!GO:0050657;nucleic acid transport;2.71587633709042e-06!GO:0051236;establishment of RNA localization;2.71587633709042e-06!GO:0050658;RNA transport;2.71587633709042e-06!GO:0032561;guanyl ribonucleotide binding;3.09131047207458e-06!GO:0019001;guanyl nucleotide binding;3.09131047207458e-06!GO:0006333;chromatin assembly or disassembly;3.37095743172045e-06!GO:0006916;anti-apoptosis;3.37095743172045e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.61456292744982e-06!GO:0006099;tricarboxylic acid cycle;3.86740814137453e-06!GO:0046356;acetyl-CoA catabolic process;3.86740814137453e-06!GO:0030133;transport vesicle;3.98726456293168e-06!GO:0016568;chromatin modification;4.92071241833846e-06!GO:0046930;pore complex;5.2951004815576e-06!GO:0031324;negative regulation of cellular metabolic process;5.39589556051188e-06!GO:0005770;late endosome;5.80896936250783e-06!GO:0005905;coated pit;5.97809753497728e-06!GO:0043566;structure-specific DNA binding;6.01500390168292e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;6.01500390168292e-06!GO:0016072;rRNA metabolic process;6.03499402094158e-06!GO:0016564;transcription repressor activity;6.07711675561858e-06!GO:0030532;small nuclear ribonucleoprotein complex;6.17922376056429e-06!GO:0044440;endosomal part;7.01021998840486e-06!GO:0010008;endosome membrane;7.01021998840486e-06!GO:0005839;proteasome core complex (sensu Eukaryota);7.53058752779969e-06!GO:0006793;phosphorus metabolic process;7.64218791527128e-06!GO:0006796;phosphate metabolic process;7.64218791527128e-06!GO:0009719;response to endogenous stimulus;7.78997580122884e-06!GO:0045259;proton-transporting ATP synthase complex;8.02467977518032e-06!GO:0006613;cotranslational protein targeting to membrane;8.16537529256286e-06!GO:0003713;transcription coactivator activity;8.38608085241926e-06!GO:0009109;coenzyme catabolic process;8.44481609338332e-06!GO:0045786;negative regulation of progression through cell cycle;8.62667186013963e-06!GO:0000278;mitotic cell cycle;8.8700239912434e-06!GO:0016859;cis-trans isomerase activity;8.96140386836824e-06!GO:0016740;transferase activity;9.33496807236996e-06!GO:0000245;spliceosome assembly;1.01921013234556e-05!GO:0000151;ubiquitin ligase complex;1.16537803644861e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.16946235033186e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.22939261028506e-05!GO:0008654;phospholipid biosynthetic process;1.23968727873991e-05!GO:0006084;acetyl-CoA metabolic process;1.29728023434452e-05!GO:0005773;vacuole;1.34860508845813e-05!GO:0006752;group transfer coenzyme metabolic process;1.57396496162569e-05!GO:0009892;negative regulation of metabolic process;1.67806962068478e-05!GO:0009117;nucleotide metabolic process;1.83322339174643e-05!GO:0016563;transcription activator activity;1.91195404085579e-05!GO:0003697;single-stranded DNA binding;1.94057415958228e-05!GO:0051187;cofactor catabolic process;2.01315713332078e-05!GO:0050789;regulation of biological process;2.10667733367253e-05!GO:0016310;phosphorylation;2.13447285561651e-05!GO:0051170;nuclear import;2.34161181879952e-05!GO:0008361;regulation of cell size;2.53576033518197e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.54699980863523e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.14139215677596e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.28285553798513e-05!GO:0016787;hydrolase activity;3.83596282277924e-05!GO:0006606;protein import into nucleus;3.85440808700578e-05!GO:0016049;cell growth;3.97803317173334e-05!GO:0030867;rough endoplasmic reticulum membrane;4.19200361616223e-05!GO:0004298;threonine endopeptidase activity;4.41134228361732e-05!GO:0048471;perinuclear region of cytoplasm;4.50623796221086e-05!GO:0051028;mRNA transport;4.98350403082303e-05!GO:0009108;coenzyme biosynthetic process;4.98808224407143e-05!GO:0008092;cytoskeletal protein binding;5.32849615112398e-05!GO:0033116;ER-Golgi intermediate compartment membrane;6.62079642341442e-05!GO:0019899;enzyme binding;6.94878912527883e-05!GO:0016491;oxidoreductase activity;7.37575059206861e-05!GO:0003724;RNA helicase activity;7.96145444254334e-05!GO:0005791;rough endoplasmic reticulum;8.22756191770545e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;8.8488289222643e-05!GO:0000785;chromatin;8.85131681631742e-05!GO:0001558;regulation of cell growth;9.15859160134432e-05!GO:0000323;lytic vacuole;9.83979082747707e-05!GO:0005764;lysosome;9.83979082747707e-05!GO:0030029;actin filament-based process;9.84947454318606e-05!GO:0005694;chromosome;0.000100483811486167!GO:0051789;response to protein stimulus;0.000103314736445992!GO:0006986;response to unfolded protein;0.000103314736445992!GO:0015980;energy derivation by oxidation of organic compounds;0.000124907507363442!GO:0016044;membrane organization and biogenesis;0.000129629236698505!GO:0007264;small GTPase mediated signal transduction;0.000129806622069525!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000130218989225861!GO:0006334;nucleosome assembly;0.000130730051939085!GO:0005762;mitochondrial large ribosomal subunit;0.00013308008947826!GO:0000315;organellar large ribosomal subunit;0.00013308008947826!GO:0044262;cellular carbohydrate metabolic process;0.000147749938183033!GO:0045454;cell redox homeostasis;0.000149118639166647!GO:0051427;hormone receptor binding;0.000154843422920836!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000155994473752662!GO:0006612;protein targeting to membrane;0.000171151338028931!GO:0006260;DNA replication;0.000177570640863888!GO:0043623;cellular protein complex assembly;0.000179712232101578!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000179733971461726!GO:0043021;ribonucleoprotein binding;0.000205745934388303!GO:0030118;clathrin coat;0.000209389489788956!GO:0019843;rRNA binding;0.000210479410338259!GO:0016481;negative regulation of transcription;0.000221891466131191!GO:0007010;cytoskeleton organization and biogenesis;0.000251218688189384!GO:0008250;oligosaccharyl transferase complex;0.000256914042399849!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000262505432732363!GO:0016779;nucleotidyltransferase activity;0.000266837428790908!GO:0044427;chromosomal part;0.000281228582888942!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000288445632500718!GO:0030176;integral to endoplasmic reticulum membrane;0.000290540883931537!GO:0005769;early endosome;0.000297423580956084!GO:0030658;transport vesicle membrane;0.000305756472452663!GO:0035257;nuclear hormone receptor binding;0.000305756472452663!GO:0004576;oligosaccharyl transferase activity;0.000317905092816123!GO:0031497;chromatin assembly;0.000327598046135114!GO:0030659;cytoplasmic vesicle membrane;0.00034875010265473!GO:0005885;Arp2/3 protein complex;0.000350471823945615!GO:0030663;COPI coated vesicle membrane;0.000365268252795999!GO:0030126;COPI vesicle coat;0.000365268252795999!GO:0019867;outer membrane;0.000390369321983074!GO:0005048;signal sequence binding;0.000400921663708734!GO:0015630;microtubule cytoskeleton;0.000418721749098206!GO:0031072;heat shock protein binding;0.000422677863239529!GO:0031968;organelle outer membrane;0.000456859601795493!GO:0001726;ruffle;0.000489104855301909!GO:0018196;peptidyl-asparagine modification;0.000633771576157136!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000633771576157136!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000655574183237415!GO:0008610;lipid biosynthetic process;0.000676323237334984!GO:0030137;COPI-coated vesicle;0.000686209357013082!GO:0044433;cytoplasmic vesicle part;0.000687384102162347!GO:0030027;lamellipodium;0.000728444305150975!GO:0006414;translational elongation;0.000746547168034484!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000788781446390984!GO:0030660;Golgi-associated vesicle membrane;0.000821032418165734!GO:0016126;sterol biosynthetic process;0.000869008333037159!GO:0051920;peroxiredoxin activity;0.000874687787080639!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00102729575889815!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00103175330244229!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00103961093343385!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00108878278677064!GO:0003899;DNA-directed RNA polymerase activity;0.00109578128109839!GO:0016363;nuclear matrix;0.00109977518362929!GO:0051301;cell division;0.00115708402287812!GO:0046474;glycerophospholipid biosynthetic process;0.00125846793411684!GO:0003729;mRNA binding;0.00128287904698219!GO:0046467;membrane lipid biosynthetic process;0.00131117636081347!GO:0008186;RNA-dependent ATPase activity;0.0013129270585445!GO:0033673;negative regulation of kinase activity;0.0013809996364481!GO:0006469;negative regulation of protein kinase activity;0.0013809996364481!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00138976823636459!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00139671537424756!GO:0048522;positive regulation of cellular process;0.00144174184980951!GO:0019798;procollagen-proline dioxygenase activity;0.00146033876027811!GO:0000314;organellar small ribosomal subunit;0.00151835321854518!GO:0005763;mitochondrial small ribosomal subunit;0.00151835321854518!GO:0012506;vesicle membrane;0.00151971603071822!GO:0042802;identical protein binding;0.00153176711108759!GO:0030134;ER to Golgi transport vesicle;0.00155271448085534!GO:0006891;intra-Golgi vesicle-mediated transport;0.00157327358783388!GO:0007050;cell cycle arrest;0.00159913271338686!GO:0040008;regulation of growth;0.00167945617566297!GO:0048468;cell development;0.00170763152635922!GO:0005741;mitochondrial outer membrane;0.00182993889726754!GO:0007243;protein kinase cascade;0.00184330813100256!GO:0031543;peptidyl-proline dioxygenase activity;0.00192019977928345!GO:0003690;double-stranded DNA binding;0.00202279693795195!GO:0030127;COPII vesicle coat;0.00203087881474058!GO:0012507;ER to Golgi transport vesicle membrane;0.00203087881474058!GO:0051348;negative regulation of transferase activity;0.00203720508671723!GO:0043284;biopolymer biosynthetic process;0.00213949504109198!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00216704371120132!GO:0015399;primary active transmembrane transporter activity;0.00216704371120132!GO:0000059;protein import into nucleus, docking;0.00216704371120132!GO:0030132;clathrin coat of coated pit;0.00218209065209396!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00222309816212074!GO:0005813;centrosome;0.00227697402791516!GO:0048500;signal recognition particle;0.00235406529901971!GO:0051168;nuclear export;0.00240139619345758!GO:0000087;M phase of mitotic cell cycle;0.00250320287979296!GO:0009165;nucleotide biosynthetic process;0.00257840902961504!GO:0030119;AP-type membrane coat adaptor complex;0.00258288830870509!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0026716810165365!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0026716810165365!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0026716810165365!GO:0045045;secretory pathway;0.00280204505397022!GO:0006091;generation of precursor metabolites and energy;0.00280843357494581!GO:0022403;cell cycle phase;0.00285593729719012!GO:0006839;mitochondrial transport;0.0029153060390075!GO:0007067;mitosis;0.00293757622993366!GO:0006695;cholesterol biosynthetic process;0.00306654800286235!GO:0004004;ATP-dependent RNA helicase activity;0.00317395082021945!GO:0006383;transcription from RNA polymerase III promoter;0.00325339948093069!GO:0051252;regulation of RNA metabolic process;0.00335985846319232!GO:0006509;membrane protein ectodomain proteolysis;0.00366203770434636!GO:0033619;membrane protein proteolysis;0.00366203770434636!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00379638605754943!GO:0046489;phosphoinositide biosynthetic process;0.00380822585107718!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00383128680665499!GO:0030125;clathrin vesicle coat;0.00388512345226388!GO:0030665;clathrin coated vesicle membrane;0.00388512345226388!GO:0016197;endosome transport;0.00392450131133514!GO:0030131;clathrin adaptor complex;0.0039999179113251!GO:0065009;regulation of a molecular function;0.00409264936201366!GO:0043681;protein import into mitochondrion;0.0041518802190173!GO:0006402;mRNA catabolic process;0.00459118994492911!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00462415973837213!GO:0045047;protein targeting to ER;0.00462415973837213!GO:0008139;nuclear localization sequence binding;0.00466940922139676!GO:0051128;regulation of cellular component organization and biogenesis;0.00503923000987147!GO:0030521;androgen receptor signaling pathway;0.00526479741097773!GO:0005815;microtubule organizing center;0.00526479741097773!GO:0035258;steroid hormone receptor binding;0.00526570611482646!GO:0051329;interphase of mitotic cell cycle;0.00567431157630544!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00570586767927671!GO:0006352;transcription initiation;0.00578362996640235!GO:0006892;post-Golgi vesicle-mediated transport;0.00622706321216151!GO:0006626;protein targeting to mitochondrion;0.00627417577888409!GO:0000049;tRNA binding;0.0064545473042985!GO:0007040;lysosome organization and biogenesis;0.0064545473042985!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00652688769687201!GO:0045893;positive regulation of transcription, DNA-dependent;0.00679860645314761!GO:0015992;proton transport;0.00706597363783159!GO:0017166;vinculin binding;0.00711327865114978!GO:0048487;beta-tubulin binding;0.00725290088455197!GO:0030880;RNA polymerase complex;0.00743114874674802!GO:0006818;hydrogen transport;0.0078527812247221!GO:0007006;mitochondrial membrane organization and biogenesis;0.00789699300104553!GO:0008312;7S RNA binding;0.00797310976222751!GO:0008047;enzyme activator activity;0.00826770175598107!GO:0031418;L-ascorbic acid binding;0.00836003733255983!GO:0003711;transcription elongation regulator activity;0.00839093509981214!GO:0003779;actin binding;0.00841008496361415!GO:0051270;regulation of cell motility;0.00841008496361415!GO:0019222;regulation of metabolic process;0.00854422418091896!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00860260021815486!GO:0006650;glycerophospholipid metabolic process;0.00878631020813864!GO:0045892;negative regulation of transcription, DNA-dependent;0.00896811512302183!GO:0051325;interphase;0.00912637657600079!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00927653489171983!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00927653489171983!GO:0051087;chaperone binding;0.00932276878135393!GO:0031124;mRNA 3'-end processing;0.00940740209779069!GO:0007033;vacuole organization and biogenesis;0.00956334190652977!GO:0031902;late endosome membrane;0.00973252199675857!GO:0043488;regulation of mRNA stability;0.0101744045226092!GO:0043487;regulation of RNA stability;0.0101744045226092!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0102193007437837!GO:0005869;dynactin complex;0.0103068506824772!GO:0006897;endocytosis;0.0105905071142221!GO:0010324;membrane invagination;0.0105905071142221!GO:0006740;NADPH regeneration;0.0108239091395872!GO:0006098;pentose-phosphate shunt;0.0108239091395872!GO:0005862;muscle thin filament tropomyosin;0.0110274113631279!GO:0007265;Ras protein signal transduction;0.0111820498683726!GO:0008180;signalosome;0.0115527789650353!GO:0044452;nucleolar part;0.0118950548638428!GO:0000902;cell morphogenesis;0.0119088609556736!GO:0032989;cellular structure morphogenesis;0.0119088609556736!GO:0016251;general RNA polymerase II transcription factor activity;0.0120230457110448!GO:0000339;RNA cap binding;0.0121145819818638!GO:0031625;ubiquitin protein ligase binding;0.0122768449862216!GO:0000209;protein polyubiquitination;0.0122768449862216!GO:0032940;secretion by cell;0.0125149910367074!GO:0008286;insulin receptor signaling pathway;0.0125759287729509!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0126911614839665!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0129850355263271!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0129850355263271!GO:0031301;integral to organelle membrane;0.0131244064165689!GO:0065007;biological regulation;0.0131858337137626!GO:0006417;regulation of translation;0.0134568773229683!GO:0030384;phosphoinositide metabolic process;0.0140165991256417!GO:0043022;ribosome binding;0.0145168703591414!GO:0051101;regulation of DNA binding;0.0145286015723117!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0146712417873431!GO:0000428;DNA-directed RNA polymerase complex;0.0146712417873431!GO:0045941;positive regulation of transcription;0.0147152743991678!GO:0043492;ATPase activity, coupled to movement of substances;0.0148674921772104!GO:0005832;chaperonin-containing T-complex;0.015728630722928!GO:0051287;NAD binding;0.015955597881937!GO:0031123;RNA 3'-end processing;0.0160527112708151!GO:0006643;membrane lipid metabolic process;0.0161113385403995!GO:0007030;Golgi organization and biogenesis;0.0171085441728531!GO:0050811;GABA receptor binding;0.0178715917838396!GO:0015631;tubulin binding;0.0179600736130319!GO:0050681;androgen receptor binding;0.017971782917065!GO:0005669;transcription factor TFIID complex;0.0182961426627266!GO:0003684;damaged DNA binding;0.0185057017832613!GO:0003746;translation elongation factor activity;0.0185911580513136!GO:0006518;peptide metabolic process;0.0192015100316543!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0193900668647616!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0194008144382874!GO:0040011;locomotion;0.0198028792377756!GO:0031529;ruffle organization and biogenesis;0.0198612738119824!GO:0016272;prefoldin complex;0.0200538631305482!GO:0044420;extracellular matrix part;0.0205264988657186!GO:0051098;regulation of binding;0.0205765216683756!GO:0006672;ceramide metabolic process;0.0209817382114451!GO:0003682;chromatin binding;0.0213711905515948!GO:0040012;regulation of locomotion;0.0213711905515948!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0213941360348929!GO:0006979;response to oxidative stress;0.0213941360348929!GO:0050750;low-density lipoprotein receptor binding;0.0214757738083688!GO:0032984;macromolecular complex disassembly;0.0215742115616897!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0215742115616897!GO:0008022;protein C-terminus binding;0.021994451325887!GO:0016408;C-acyltransferase activity;0.0220748688651201!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0224062067006612!GO:0032906;transforming growth factor-beta2 production;0.0224062067006612!GO:0032909;regulation of transforming growth factor-beta2 production;0.0224062067006612!GO:0031901;early endosome membrane;0.0224773448671241!GO:0030145;manganese ion binding;0.0232202963391897!GO:0043624;cellular protein complex disassembly;0.0236406300243035!GO:0000082;G1/S transition of mitotic cell cycle;0.0246199596252111!GO:0005801;cis-Golgi network;0.0246610973602844!GO:0006497;protein amino acid lipidation;0.0246950382968022!GO:0008632;apoptotic program;0.0250009381299959!GO:0006611;protein export from nucleus;0.0251559121767655!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0251559121767655!GO:0015002;heme-copper terminal oxidase activity;0.0251559121767655!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0251559121767655!GO:0004129;cytochrome-c oxidase activity;0.0251559121767655!GO:0045792;negative regulation of cell size;0.0251751202629!GO:0046519;sphingoid metabolic process;0.025182673347158!GO:0000096;sulfur amino acid metabolic process;0.0251969300371649!GO:0005581;collagen;0.0253346355904442!GO:0008147;structural constituent of bone;0.0253990648808512!GO:0019752;carboxylic acid metabolic process;0.0260664236212446!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0261982995930735!GO:0016860;intramolecular oxidoreductase activity;0.0263500713336883!GO:0007034;vacuolar transport;0.026426170390961!GO:0030308;negative regulation of cell growth;0.026482313960954!GO:0006082;organic acid metabolic process;0.0265025533884252!GO:0008154;actin polymerization and/or depolymerization;0.0265025533884252!GO:0004674;protein serine/threonine kinase activity;0.0265025533884252!GO:0006790;sulfur metabolic process;0.0265465528098255!GO:0006595;polyamine metabolic process;0.0271661320511277!GO:0003756;protein disulfide isomerase activity;0.0277231033291215!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0277231033291215!GO:0005684;U2-dependent spliceosome;0.0302687277909286!GO:0016584;nucleosome positioning;0.0307504716697404!GO:0045936;negative regulation of phosphate metabolic process;0.0307504716697404!GO:0030518;steroid hormone receptor signaling pathway;0.0312341322820893!GO:0006289;nucleotide-excision repair;0.031532407106283!GO:0006338;chromatin remodeling;0.0317799320593117!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0320437638229085!GO:0006376;mRNA splice site selection;0.0322903235956737!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0322903235956737!GO:0008652;amino acid biosynthetic process;0.0325597273756633!GO:0043086;negative regulation of catalytic activity;0.0326772012852006!GO:0030140;trans-Golgi network transport vesicle;0.0326772012852006!GO:0043034;costamere;0.032848090279301!GO:0006144;purine base metabolic process;0.0330201757229568!GO:0042158;lipoprotein biosynthetic process;0.0330222251819238!GO:0050790;regulation of catalytic activity;0.0336507415446465!GO:0022406;membrane docking;0.0337411022800116!GO:0048278;vesicle docking;0.0337411022800116!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0343310764130856!GO:0033043;regulation of organelle organization and biogenesis;0.0343310764130856!GO:0051059;NF-kappaB binding;0.0353438834324722!GO:0008637;apoptotic mitochondrial changes;0.035869383174368!GO:0043241;protein complex disassembly;0.036062814514959!GO:0006984;ER-nuclear signaling pathway;0.036062814514959!GO:0030032;lamellipodium biogenesis;0.036159176445836!GO:0048518;positive regulation of biological process;0.0363257266335758!GO:0005938;cell cortex;0.0363262155833152!GO:0042585;germinal vesicle;0.0363373896881875!GO:0051540;metal cluster binding;0.0372964598118123!GO:0051536;iron-sulfur cluster binding;0.0372964598118123!GO:0006739;NADP metabolic process;0.0380003194528935!GO:0004177;aminopeptidase activity;0.0383142321531745!GO:0006378;mRNA polyadenylation;0.0383142321531745!GO:0030433;ER-associated protein catabolic process;0.0383932169013383!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0383932169013383!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0388195347137478!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0388195347137478!GO:0004860;protein kinase inhibitor activity;0.0388195347137478!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0392577860349043!GO:0006007;glucose catabolic process;0.0393486425905151!GO:0008538;proteasome activator activity;0.03948220515373!GO:0031371;ubiquitin conjugating enzyme complex;0.0395789270250735!GO:0046483;heterocycle metabolic process;0.0397584234572898!GO:0048819;regulation of hair follicle maturation;0.0398441068427107!GO:0051794;regulation of catagen;0.0398441068427107!GO:0051795;positive regulation of catagen;0.0398441068427107!GO:0048818;positive regulation of hair follicle maturation;0.0398441068427107!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0400179526156798!GO:0009889;regulation of biosynthetic process;0.0402691695606784!GO:0007021;tubulin folding;0.0402937993591026!GO:0006506;GPI anchor biosynthetic process;0.0403280194910596!GO:0022890;inorganic cation transmembrane transporter activity;0.0403280194910596!GO:0008033;tRNA processing;0.0408712006046791!GO:0045334;clathrin-coated endocytic vesicle;0.041405043011846!GO:0005637;nuclear inner membrane;0.0414657843843157!GO:0006354;RNA elongation;0.0414657843843157!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0414657843843157!GO:0005100;Rho GTPase activator activity;0.0414981177227276!GO:0009967;positive regulation of signal transduction;0.0415575689890422!GO:0006644;phospholipid metabolic process;0.0417988509491167!GO:0033559;unsaturated fatty acid metabolic process;0.0418169495026985!GO:0006636;unsaturated fatty acid biosynthetic process;0.0418169495026985!GO:0006505;GPI anchor metabolic process;0.0419983956841443!GO:0030833;regulation of actin filament polymerization;0.0424472991212477!GO:0006401;RNA catabolic process;0.0426719828561836!GO:0003923;GPI-anchor transamidase activity;0.0431202922277581!GO:0016255;attachment of GPI anchor to protein;0.0431202922277581!GO:0042765;GPI-anchor transamidase complex;0.0431202922277581!GO:0030100;regulation of endocytosis;0.043703382368556!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0442347777593166!GO:0001952;regulation of cell-matrix adhesion;0.0444365840190503!GO:0031326;regulation of cellular biosynthetic process;0.044871167908828!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0450206947542052!GO:0030041;actin filament polymerization;0.0453228411815929!GO:0005784;translocon complex;0.046105819228267!GO:0006607;NLS-bearing substrate import into nucleus;0.0462976751582244!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0462997605723979!GO:0005099;Ras GTPase activator activity;0.046758711333406!GO:0031575;G1/S transition checkpoint;0.046758711333406!GO:0006904;vesicle docking during exocytosis;0.0468213222758575!GO:0006720;isoprenoid metabolic process;0.0468377651189878!GO:0005975;carbohydrate metabolic process;0.0470474334141259!GO:0035035;histone acetyltransferase binding;0.0471272726683603!GO:0007004;telomere maintenance via telomerase;0.0471272726683603!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0477399570563317!GO:0048144;fibroblast proliferation;0.0477678218444668!GO:0048145;regulation of fibroblast proliferation;0.0477678218444668!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0477678218444668!GO:0022408;negative regulation of cell-cell adhesion;0.0478394350851615!GO:0051052;regulation of DNA metabolic process;0.0480666488209473!GO:0005774;vacuolar membrane;0.0484271763315218!GO:0008287;protein serine/threonine phosphatase complex;0.0492440846294568!GO:0035267;NuA4 histone acetyltransferase complex;0.0494494303585437!GO:0008234;cysteine-type peptidase activity;0.049941954940561!GO:0000786;nucleosome;0.0499472095669902 | |||
|sample_id=11690 | |sample_id=11690 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=eye | |sample_tissue=eye | ||
|top_motifs=NKX3-1:1.67458090786;PAX1,9:1.43948876933;NKX2-1,4:1.39311545787;SOX17:1.34922324561;TAL1_TCF{3,4,12}:1.26360954985;NFATC1..3:1.23781901264;HSF1,2:1.20486422597;SRF:1.20156797369;MAZ:1.19669779524;TEAD1:1.18602556062;NR3C1:1.14600659144;HIF1A:1.1082525395;EN1,2:1.10810519432;MZF1:1.08030255374;HOX{A5,B5}:1.03222867532;SOX2:0.985583607861;TFAP4:0.972544973297;ZNF384:0.95592569357;T:0.930615005345;IKZF1:0.913015505665;GTF2A1,2:0.902052300206;MTE{core}:0.890286127921;POU3F1..4:0.882811056484;ATF6:0.862442156426;TBX4,5:0.850887673411;NANOG{mouse}:0.839996168007;SMAD1..7,9:0.832268455679;MYBL2:0.826551290137;GLI1..3:0.819945114044;PATZ1:0.818357976883;NHLH1,2:0.784699212228;TFAP2{A,C}:0.773109598019;TP53:0.769993216088;GTF2I:0.754009469398;TFCP2:0.724785109751;TLX1..3_NFIC{dimer}:0.706795583492;FOXA2:0.694169239519;LHX3,4:0.669436771304;NANOG:0.658423414898;GFI1B:0.655309768394;POU5F1:0.61474953148;ZFP161:0.608167897766;ZNF148:0.60581283662;EGR1..3:0.596703741776;NKX2-3_NKX2-5:0.587812843673;DBP:0.581126999405;CDC5L:0.553082161845;PAX5:0.536288095205;EBF1:0.526109324033;KLF4:0.514478462286;PRDM1:0.498185934662;MYFfamily:0.479876273046;MAFB:0.47853596945;TBP:0.468760747721;CRX:0.45980369185;ADNP_IRX_SIX_ZHX:0.458584868453;SP1:0.455328727188;ONECUT1,2:0.443751842858;LEF1_TCF7_TCF7L1,2:0.438116609269;AHR_ARNT_ARNT2:0.412194525861;ALX1:0.410811395206;NR6A1:0.389954898913;PAX4:0.371970830638;FOXN1:0.351773609111;HIC1:0.351198949858;PDX1:0.346814457573;GFI1:0.341707761391;ZNF423:0.339746424514;GATA4:0.336169337536;NFE2L2:0.316447550594;PAX8:0.315174128704;PRRX1,2:0.307559452183;ZIC1..3:0.305523415376;HOX{A4,D4}:0.301903632677;XCPE1{core}:0.301264701944;FOSL2:0.295775808938;TFAP2B:0.286858289188;NKX3-2:0.281702656678;RXR{A,B,G}:0.274407763198;VSX1,2:0.261164804933;NRF1:0.223182694904;ALX4:0.217496264713;EVI1:0.213501677471;TLX2:0.205982229324;HMGA1,2:0.200646831276;XBP1:0.198554114306;ZBTB6:0.190170841652;TFDP1:0.170107182689;STAT5{A,B}:0.160391202865;NFE2L1:0.15612242294;HOXA9_MEIS1:0.152984500573;NFIX:0.138738316922;MED-1{core}:0.138586080087;FOXM1:0.136864155107;JUN:0.132768332948;STAT1,3:0.12224464556;ELK1,4_GABP{A,B1}:0.1143591815;NFY{A,B,C}:0.0917675012653;RORA:0.0839246809576;ZNF143:0.0836742688914;TEF:0.0834139449426;REST:0.0516880823287;HNF1A:0.0478759129894;AR:0.0351637172283;BACH2:0.0348697300141;AIRE:0.0325187186054;FOXP3:0.0282892224121;HLF:0.022446491684;UFEwm:0.0163746298552;RFX1:0.0155969145082;ELF1,2,4:0.0114171446822;HNF4A_NR2F1,2:0.0087330075171;SPZ1:-0.00355215340229;HOX{A6,A7,B6,B7}:-0.00649853712399;bHLH_family:-0.0101732179176;NFE2:-0.0237164732144;NR1H4:-0.0355901344537;GZF1:-0.0359008252364;CUX2:-0.0449482967533;RBPJ:-0.047398418698;FOXQ1:-0.0652994981583;NFIL3:-0.0711118850371;MEF2{A,B,C,D}:-0.0784443691061;GATA6:-0.0821938502787;POU6F1:-0.0825568209298;PAX6:-0.0964393956702;MYOD1:-0.102091955371;FOX{D1,D2}:-0.107310536345;RREB1:-0.110916122746;MTF1:-0.114777491656;PAX2:-0.11590239335;IRF7:-0.12476763092;FOS_FOS{B,L1}_JUN{B,D}:-0.132322190524;OCT4_SOX2{dimer}:-0.136370413265;HMX1:-0.136948221071;HAND1,2:-0.13757893622;ATF2:-0.138914546963;CDX1,2,4:-0.140819645839;TGIF1:-0.149885906859;ZNF238:-0.160305452065;PPARG:-0.164789116545;SOX5:-0.184558695975;PBX1:-0.185997436751;CEBPA,B_DDIT3:-0.195885604859;IRF1,2:-0.196148279387;SREBF1,2:-0.206890028898;RUNX1..3:-0.225016570061;SOX{8,9,10}:-0.253273102409;ATF4:-0.274335692534;FOX{I1,J2}:-0.276497232213;NFKB1_REL_RELA:-0.280782494275;HBP1_HMGB_SSRP1_UBTF:-0.29598086777;BREu{core}:-0.316259834833;ZEB1:-0.322596697214;FOX{F1,F2,J1}:-0.322838282573;SNAI1..3:-0.325800186995;LMO2:-0.331817123215;EP300:-0.349750368321;ETS1,2:-0.351187139085;MYB:-0.377507594249;TOPORS:-0.379376853544;NR5A1,2:-0.379953936866;ATF5_CREB3:-0.3829318602;SPI1:-0.385737782584;STAT2,4,6:-0.392629418042;GCM1,2:-0.423419922596;E2F1..5:-0.479510880058;ESRRA:-0.5031493446;YY1:-0.516139765613;SPIB:-0.526116057979;NKX2-2,8:-0.530262343473;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.530728263858;BPTF:-0.535896672523;ARID5B:-0.540648524139;DMAP1_NCOR{1,2}_SMARC:-0.54463842395;RFX2..5_RFXANK_RFXAP:-0.567803995577;POU2F1..3:-0.56783071965;FOXL1:-0.620979006965;RXRA_VDR{dimer}:-0.647022361766;POU1F1:-0.65316290194;ESR1:-0.688416561939;FOXO1,3,4:-0.730227491875;PAX3,7:-0.822284658351;NKX6-1,2:-0.891287515332;ZBTB16:-0.920160397998;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.950518278456;CREB1:-0.954637039973;IKZF2:-1.01000316417;HES1:-1.09708170538;PITX1..3:-1.09719954736;FOXP1:-1.18917940598;FOXD3:-1.26546068335 | |top_motifs=NKX3-1:1.67458090786;PAX1,9:1.43948876933;NKX2-1,4:1.39311545787;SOX17:1.34922324561;TAL1_TCF{3,4,12}:1.26360954985;NFATC1..3:1.23781901264;HSF1,2:1.20486422597;SRF:1.20156797369;MAZ:1.19669779524;TEAD1:1.18602556062;NR3C1:1.14600659144;HIF1A:1.1082525395;EN1,2:1.10810519432;MZF1:1.08030255374;HOX{A5,B5}:1.03222867532;SOX2:0.985583607861;TFAP4:0.972544973297;ZNF384:0.95592569357;T:0.930615005345;IKZF1:0.913015505665;GTF2A1,2:0.902052300206;MTE{core}:0.890286127921;POU3F1..4:0.882811056484;ATF6:0.862442156426;TBX4,5:0.850887673411;NANOG{mouse}:0.839996168007;SMAD1..7,9:0.832268455679;MYBL2:0.826551290137;GLI1..3:0.819945114044;PATZ1:0.818357976883;NHLH1,2:0.784699212228;TFAP2{A,C}:0.773109598019;TP53:0.769993216088;GTF2I:0.754009469398;TFCP2:0.724785109751;TLX1..3_NFIC{dimer}:0.706795583492;FOXA2:0.694169239519;LHX3,4:0.669436771304;NANOG:0.658423414898;GFI1B:0.655309768394;POU5F1:0.61474953148;ZFP161:0.608167897766;ZNF148:0.60581283662;EGR1..3:0.596703741776;NKX2-3_NKX2-5:0.587812843673;DBP:0.581126999405;CDC5L:0.553082161845;PAX5:0.536288095205;EBF1:0.526109324033;KLF4:0.514478462286;PRDM1:0.498185934662;MYFfamily:0.479876273046;MAFB:0.47853596945;TBP:0.468760747721;CRX:0.45980369185;ADNP_IRX_SIX_ZHX:0.458584868453;SP1:0.455328727188;ONECUT1,2:0.443751842858;LEF1_TCF7_TCF7L1,2:0.438116609269;AHR_ARNT_ARNT2:0.412194525861;ALX1:0.410811395206;NR6A1:0.389954898913;PAX4:0.371970830638;FOXN1:0.351773609111;HIC1:0.351198949858;PDX1:0.346814457573;GFI1:0.341707761391;ZNF423:0.339746424514;GATA4:0.336169337536;NFE2L2:0.316447550594;PAX8:0.315174128704;PRRX1,2:0.307559452183;ZIC1..3:0.305523415376;HOX{A4,D4}:0.301903632677;XCPE1{core}:0.301264701944;FOSL2:0.295775808938;TFAP2B:0.286858289188;NKX3-2:0.281702656678;RXR{A,B,G}:0.274407763198;VSX1,2:0.261164804933;NRF1:0.223182694904;ALX4:0.217496264713;EVI1:0.213501677471;TLX2:0.205982229324;HMGA1,2:0.200646831276;XBP1:0.198554114306;ZBTB6:0.190170841652;TFDP1:0.170107182689;STAT5{A,B}:0.160391202865;NFE2L1:0.15612242294;HOXA9_MEIS1:0.152984500573;NFIX:0.138738316922;MED-1{core}:0.138586080087;FOXM1:0.136864155107;JUN:0.132768332948;STAT1,3:0.12224464556;ELK1,4_GABP{A,B1}:0.1143591815;NFY{A,B,C}:0.0917675012653;RORA:0.0839246809576;ZNF143:0.0836742688914;TEF:0.0834139449426;REST:0.0516880823287;HNF1A:0.0478759129894;AR:0.0351637172283;BACH2:0.0348697300141;AIRE:0.0325187186054;FOXP3:0.0282892224121;HLF:0.022446491684;UFEwm:0.0163746298552;RFX1:0.0155969145082;ELF1,2,4:0.0114171446822;HNF4A_NR2F1,2:0.0087330075171;SPZ1:-0.00355215340229;HOX{A6,A7,B6,B7}:-0.00649853712399;bHLH_family:-0.0101732179176;NFE2:-0.0237164732144;NR1H4:-0.0355901344537;GZF1:-0.0359008252364;CUX2:-0.0449482967533;RBPJ:-0.047398418698;FOXQ1:-0.0652994981583;NFIL3:-0.0711118850371;MEF2{A,B,C,D}:-0.0784443691061;GATA6:-0.0821938502787;POU6F1:-0.0825568209298;PAX6:-0.0964393956702;MYOD1:-0.102091955371;FOX{D1,D2}:-0.107310536345;RREB1:-0.110916122746;MTF1:-0.114777491656;PAX2:-0.11590239335;IRF7:-0.12476763092;FOS_FOS{B,L1}_JUN{B,D}:-0.132322190524;OCT4_SOX2{dimer}:-0.136370413265;HMX1:-0.136948221071;HAND1,2:-0.13757893622;ATF2:-0.138914546963;CDX1,2,4:-0.140819645839;TGIF1:-0.149885906859;ZNF238:-0.160305452065;PPARG:-0.164789116545;SOX5:-0.184558695975;PBX1:-0.185997436751;CEBPA,B_DDIT3:-0.195885604859;IRF1,2:-0.196148279387;SREBF1,2:-0.206890028898;RUNX1..3:-0.225016570061;SOX{8,9,10}:-0.253273102409;ATF4:-0.274335692534;FOX{I1,J2}:-0.276497232213;NFKB1_REL_RELA:-0.280782494275;HBP1_HMGB_SSRP1_UBTF:-0.29598086777;BREu{core}:-0.316259834833;ZEB1:-0.322596697214;FOX{F1,F2,J1}:-0.322838282573;SNAI1..3:-0.325800186995;LMO2:-0.331817123215;EP300:-0.349750368321;ETS1,2:-0.351187139085;MYB:-0.377507594249;TOPORS:-0.379376853544;NR5A1,2:-0.379953936866;ATF5_CREB3:-0.3829318602;SPI1:-0.385737782584;STAT2,4,6:-0.392629418042;GCM1,2:-0.423419922596;E2F1..5:-0.479510880058;ESRRA:-0.5031493446;YY1:-0.516139765613;SPIB:-0.526116057979;NKX2-2,8:-0.530262343473;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.530728263858;BPTF:-0.535896672523;ARID5B:-0.540648524139;DMAP1_NCOR{1,2}_SMARC:-0.54463842395;RFX2..5_RFXANK_RFXAP:-0.567803995577;POU2F1..3:-0.56783071965;FOXL1:-0.620979006965;RXRA_VDR{dimer}:-0.647022361766;POU1F1:-0.65316290194;ESR1:-0.688416561939;FOXO1,3,4:-0.730227491875;PAX3,7:-0.822284658351;NKX6-1,2:-0.891287515332;ZBTB16:-0.920160397998;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.950518278456;CREB1:-0.954637039973;IKZF2:-1.01000316417;HES1:-1.09708170538;PITX1..3:-1.09719954736;FOXP1:-1.18917940598;FOXD3:-1.26546068335 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11690-122I7;search_select_hide=table117:FF:11690-122I7 | |||
}} | }} | ||
Latest revision as of 18:15, 4 June 2020
| Name: | Lens Epithelial Cells, donor3 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12572 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12572
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12572
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0251 |
| 10 | 10 | 0.0316 |
| 100 | 100 | 0.288 |
| 101 | 101 | 0.574 |
| 102 | 102 | 0.168 |
| 103 | 103 | 0.698 |
| 104 | 104 | 0.809 |
| 105 | 105 | 0.982 |
| 106 | 106 | 0.272 |
| 107 | 107 | 0.901 |
| 108 | 108 | 0.747 |
| 109 | 109 | 0.0301 |
| 11 | 11 | 0.0257 |
| 110 | 110 | 0.141 |
| 111 | 111 | 0.00572 |
| 112 | 112 | 0.0769 |
| 113 | 113 | 0.0894 |
| 114 | 114 | 0.135 |
| 115 | 115 | 0.382 |
| 116 | 116 | 0.482 |
| 117 | 117 | 0.0321 |
| 118 | 118 | 0.0324 |
| 119 | 119 | 0.206 |
| 12 | 12 | 0.317 |
| 120 | 120 | 0.779 |
| 121 | 121 | 0.915 |
| 122 | 122 | 0.867 |
| 123 | 123 | 2.29713e-6 |
| 124 | 124 | 0.944 |
| 125 | 125 | 0.149 |
| 126 | 126 | 0.424 |
| 127 | 127 | 0.433 |
| 128 | 128 | 0.474 |
| 129 | 129 | 0.179 |
| 13 | 13 | 0.0646 |
| 130 | 130 | 0.226 |
| 131 | 131 | 0.395 |
| 132 | 132 | 0.908 |
| 133 | 133 | 0.0266 |
| 134 | 134 | 0.597 |
| 135 | 135 | 0.403 |
| 136 | 136 | 0.89 |
| 137 | 137 | 0.141 |
| 138 | 138 | 0.561 |
| 139 | 139 | 0.0971 |
| 14 | 14 | 0.491 |
| 140 | 140 | 0.356 |
| 141 | 141 | 0.0344 |
| 142 | 142 | 0.913 |
| 143 | 143 | 0.931 |
| 144 | 144 | 0.868 |
| 145 | 145 | 0.189 |
| 146 | 146 | 0.929 |
| 147 | 147 | 0.403 |
| 148 | 148 | 0.0295 |
| 149 | 149 | 0.55 |
| 15 | 15 | 0.324 |
| 150 | 150 | 0.833 |
| 151 | 151 | 0.301 |
| 152 | 152 | 0.701 |
| 153 | 153 | 0.996 |
| 154 | 154 | 0.923 |
| 155 | 155 | 6.20634e-4 |
| 156 | 156 | 0.162 |
| 157 | 157 | 0.357 |
| 158 | 158 | 0.00259 |
| 159 | 159 | 0.403 |
| 16 | 16 | 0.508 |
| 160 | 160 | 0.161 |
| 161 | 161 | 0.245 |
| 162 | 162 | 0.737 |
| 163 | 163 | 0.0528 |
| 164 | 164 | 0.127 |
| 165 | 165 | 0.564 |
| 166 | 166 | 0.125 |
| 167 | 167 | 0.156 |
| 168 | 168 | 0.904 |
| 169 | 169 | 0.0176 |
| 17 | 17 | 0.357 |
| 18 | 18 | 0.459 |
| 19 | 19 | 0.403 |
| 2 | 2 | 0.89 |
| 20 | 20 | 0.262 |
| 21 | 21 | 0.0957 |
| 22 | 22 | 0.364 |
| 23 | 23 | 0.747 |
| 24 | 24 | 0.576 |
| 25 | 25 | 0.279 |
| 26 | 26 | 0.00874 |
| 27 | 27 | 0.827 |
| 28 | 28 | 0.899 |
| 29 | 29 | 0.0974 |
| 3 | 3 | 0.124 |
| 30 | 30 | 0.295 |
| 31 | 31 | 0.99 |
| 32 | 32 | 0.349 |
| 33 | 33 | 0.181 |
| 34 | 34 | 0.851 |
| 35 | 35 | 0.226 |
| 36 | 36 | 0.0277 |
| 37 | 37 | 0.228 |
| 38 | 38 | 0.151 |
| 39 | 39 | 0.589 |
| 4 | 4 | 0.593 |
| 40 | 40 | 0.0243 |
| 41 | 41 | 0.295 |
| 42 | 42 | 0.38 |
| 43 | 43 | 0.12 |
| 44 | 44 | 0.293 |
| 45 | 45 | 0.778 |
| 46 | 46 | 0.0596 |
| 47 | 47 | 0.0419 |
| 48 | 48 | 0.121 |
| 49 | 49 | 0.0348 |
| 5 | 5 | 0.754 |
| 50 | 50 | 0.791 |
| 51 | 51 | 0.517 |
| 52 | 52 | 0.981 |
| 53 | 53 | 0.209 |
| 54 | 54 | 0.611 |
| 55 | 55 | 0.894 |
| 56 | 56 | 0.614 |
| 57 | 57 | 0.27 |
| 58 | 58 | 0.145 |
| 59 | 59 | 0.403 |
| 6 | 6 | 0.174 |
| 60 | 60 | 0.143 |
| 61 | 61 | 0.162 |
| 62 | 62 | 0.137 |
| 63 | 63 | 0.2 |
| 64 | 64 | 0.114 |
| 65 | 65 | 0.222 |
| 66 | 66 | 0.571 |
| 67 | 67 | 0.973 |
| 68 | 68 | 0.665 |
| 69 | 69 | 0.895 |
| 7 | 7 | 0.242 |
| 70 | 70 | 0.0393 |
| 71 | 71 | 0.0382 |
| 72 | 72 | 0.844 |
| 73 | 73 | 0.25 |
| 74 | 74 | 0.192 |
| 75 | 75 | 0.012 |
| 76 | 76 | 0.0511 |
| 77 | 77 | 0.244 |
| 78 | 78 | 0.301 |
| 79 | 79 | 0.817 |
| 8 | 8 | 0.2 |
| 80 | 80 | 0.17 |
| 81 | 81 | 0.301 |
| 82 | 82 | 0.156 |
| 83 | 83 | 0.58 |
| 84 | 84 | 0.769 |
| 85 | 85 | 0.27 |
| 86 | 86 | 0.593 |
| 87 | 87 | 0.789 |
| 88 | 88 | 0.932 |
| 89 | 89 | 0.639 |
| 9 | 9 | 0.898 |
| 90 | 90 | 0.279 |
| 91 | 91 | 0.962 |
| 92 | 92 | 0.832 |
| 93 | 93 | 0.553 |
| 94 | 94 | 0.188 |
| 95 | 95 | 0.0403 |
| 96 | 96 | 0.0784 |
| 97 | 97 | 0.319 |
| 98 | 98 | 0.0278 |
| 99 | 99 | 0.569 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12572
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000306 (crystallin accumulating cell)
0002222 (vertebrate lens cell)
0002224 (lens epithelial cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000970 (eye)
0000019 (camera-type eye)
0000483 (epithelium)
0000033 (head)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0010077 (cuboidal epithelium)
0005389 (transparent eye structure)
0000020 (sense organ)
0010371 (ecto-epithelium)
0007625 (pigment epithelium of eye)
0000484 (simple cuboidal epithelium)
0001032 (sensory system)
0010317 (germ layer / neural crest derived structure)
0000965 (lens of camera-type eye)
0001803 (epithelium of lens)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0010230 (eyeball of camera-type eye)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000085 (human lens epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
