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{{f5samples
{{f5samples
|id=FF:10704-109H2
|DRA_sample_Accession=CAGE@SAMD00005057
|name=osteoclastoma cell line:Hs 706.T
|accession_numbers=CAGE;DRX007976;DRR008848;DRZ000273;DRZ001658;DRZ011623;DRZ013008
|sample_id=10704
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002371,UBERON:0001474,UBERON:0002384,UBERON:0000479,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0004765,UBERON:0010317,UBERON:0002204,UBERON:0001434,UBERON:0002390,UBERON:0002193,UBERON:0002405
|rna_tube_id=109H2
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0000151,CL:0002320,CL:0002371,CL:0000766,CL:0000219,CL:0000054,CL:0000738,CL:0000255,CL:0002092,CL:0000137,CL:0000092
|rna_box=109
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:7,DOID:201,DOID:0060100,DOID:200,DOID:4305
|rna_position=H2
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100583,FF:0100372,FF:0100969
|sample_cell_lot=
|comment=
|sample_cell_catalog=CRL-7447
|created_by=
|sample_company=ATCC
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr11:46299199..46299233,+!p1@CREB3L1!1.67!228.45!CREB3L1;;chr7:96654133..96654150,-!p1@DLX5!1.49!30.13!DLX5;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.49!30.13!ZBED1;;chr16:86600426..86600441,+!p1@FOXC2!1.36!53.39!FOXC2;;chr5:72744594..72744609,-!p1@FOXD1!1.34!93.06!FOXD1;;chr8:67525443..67525459,-!p2@MYBL1!1.28!26.70!MYBL1;;chr8:23540441..23540466,-!p1@NKX3-1!1.21!30.51!NKX3-1;;chr11:46299539..46299620,+!p2@CREB3L1!1.21!25.93!CREB3L1;;chr1:44513995..44514031,+!p1@KLF17!1.20!14.87!KLF17;;chr5:72744445..72744466,-!p2@FOXD1!1.18!23.65!FOXD1;;chr20:30433396..30433414,-!p1@FOXS1!1.16!13.35!FOXS1;;chr17:38256799..38256815,-!p3@NR1D1!1.14!23.26!NR1D1;;chr5:158526917..158526932,-!p1@EBF1!1.12!30.51!EBF1;;chr8:49833978..49833996,-!p1@SNAI2!1.11!244.85!SNAI2;;chr6:19837592..19837621,+!p1@ID4!1.11!72.08!ID4;;chr1:23885981..23886002,-!p1@ID3!1.08!1946.96!ID3;;chr2:176994408..176994492,+!p1@HOXD8!1.07!10.68!HOXD8;;chr8:49833948..49833973,-!p2@SNAI2!1.06!67.50!SNAI2;;chr20:50179368..50179392,-!p2@NFATC2!1.02!12.20!NFATC2;;chr3:5021268..5021282,+!p4@BHLHE40!0.99!18.31!BHLHE40;;chr9:132427972..132428056,+!p1@PRRX2!0.99!11.44!PRRX2;;chr8:40755333..40755352,-!p1@ZMAT4!0.99!8.77!ZMAT4;;chr14:62162285..62162296,+!p3@HIF1A!0.96!43.48!HIF1A;;chr17:38256822..38256851,-!p1@NR1D1!0.95!64.07!NR1D1;;chr5:134369905..134369972,-!p1@PITX1!0.95!12.20!PITX1;;chr7:27224842..27224872,-!p1@HOXA11!0.95!8.01!HOXA11;;chr7:96654026..96654061,-!p2@DLX5!0.95!8.01!DLX5;;chr17:48072574..48072597,-!p1@DLX3!0.92!7.25!DLX3;;chr14:62162258..62162269,+!p2@HIF1A!0.91!72.08!HIF1A;;chr17:46132044..46132080,+!p4@NFE2L1!0.90!6.86!NFE2L1;;chr5:134369879..134369898,-!p2@PITX1!0.90!6.86!PITX1;;chr19:16435625..16435682,+!p1@KLF2!0.87!220.06!KLF2;;chr2:200322654..200322707,-!p2@SATB2!0.85!9.15!SATB2;;chr11:46299443..46299459,+!p4@CREB3L1!0.85!6.10!CREB3L1;;chr5:2751762..2751784,-!p1@IRX2!0.85!6.10!IRX2;;chr7:27224795..27224840,-!p2@HOXA11!0.85!6.10!HOXA11;;chr1:119530493..119530572,-!p1@TBX15!0.85!6.10!TBX15;;chr6:45296048..45296082,+!p1@RUNX2!0.84!6.86!RUNX2;;chr2:208030647..208030689,-!p1@KLF7!0.82!50.72!KLF7;;chr12:80085061..80085119,-!p6@PAWR!0.82!9.15!PAWR;;chr19:45908292..45908374,-!p1@PPP1R13L!0.81!52.25!PPP1R13L;;chr13:74708029..74708077,-!p2@KLF12!0.80!16.40!KLF12;;chr5:158527104..158527135,-!p4@EBF1!0.80!5.34!EBF1;;chr9:132427883..132427951,+!p2@PRRX2!0.80!5.34!PRRX2;;chr2:45236540..45236577,-!p1@SIX2!0.80!5.34!SIX2;;chr2:46524537..46524553,+!p1@EPAS1!0.79!557.58!EPAS1;;chr3:25469724..25469773,+!p1@RARB!0.79!7.63!RARB;;chr16:54320158..54320200,-!p5@IRX3!0.79!7.63!IRX3;;chr16:54964740..54964789,+!p1@IRX5!0.79!7.63!IRX5;;chr7:19157043..19157088,-!p2@TWIST1!0.78!13.35!TWIST1;;chr8:67525473..67525518,-!p1@MYBL1!0.78!12.20!MYBL1;;chr16:54320646..54320672,-!p2@IRX3!0.78!8.01!IRX3;;chr5:72744562..72744573,-!p3@FOXD1!0.78!6.48!FOXD1;;chr7:27205106..27205134,-!p2@HOXA9!0.78!4.96!HOXA9;;chr1:25291475..25291511,-!p2@RUNX3!0.78!4.96!RUNX3;;chr6:1389789..1389821,+!p1@FOXF2!0.77!6.86!FOXF2;;chr16:54320617..54320643,-!p3@IRX3!0.77!6.48!IRX3;;chr5:72743793..72743855,-!p4@FOXD1!0.76!5.72!FOXD1;;chr10:63809106..63809127,+!p1@ARID5B!0.75!69.03!ARID5B;;chr2:74229812..74229867,+!p1@TET3!0.75!12.59!TET3;;chr9:4299959..4299974,-!p4@GLIS3!0.75!7.63!GLIS3;;chr13:37494248..37494260,-!p3@SMAD9!0.75!4.58!SMAD9;;chr16:86600870..86600921,+!p2@FOXC2!0.75!4.58!FOXC2;;chr19:16435705..16435726,+!p3@KLF2!0.75!4.58!KLF2;;chr20:48599506..48599526,+!p1@SNAI1!0.73!31.27!SNAI1;;chr10:63809013..63809041,+!p3@ARID5B!0.73!26.70!ARID5B;;chr1:200379104..200379128,-!p2@ZNF281!0.73!11.44!ZNF281;;chr3:178789522..178789564,-!p2@ZMAT3!0.72!34.71!ZMAT3;;chr12:53614115..53614154,-!p1@RARG!0.72!25.55!RARG;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.72!4.58!GLIS1;;chr2:237077022..237077038,-!p1@GBX2!0.72!4.20!GBX2;;chr3:25470156..25470227,+!p2@RARB!0.72!4.20!RARB;;chr16:54320101..54320125,-!p4@IRX3!0.71!6.10!IRX3;;chr11:12696071..12696086,+!p3@TEAD1!0.71!5.72!TEAD1;;chr3:71179699..71179744,-!p2@FOXP1!0.70!34.32!FOXP1;;chr14:61116183..61116208,-!p1@SIX1!0.70!17.16!SIX1;;chr13:74708475..74708499,-!p5@KLF12!0.70!9.92!KLF12;;chr3:71179746..71179783,-!p7@FOXP1!0.68!14.11!FOXP1;;chr2:208031943..208031978,-!p5@KLF7!0.68!5.34!KLF7;;chr4:109089095..109089144,-!p6@LEF1!0.68!3.81!LEF1;;chr7:1577899..1577943,+!p3@MAFK!0.68!3.81!MAFK;;chr16:31076332..31076388,-!p3@ZNF668!0.68!3.81!ZNF668;;chr11:46299186..46299195,+!p3@CREB3L1!0.67!4.20!CREB3L1;;chr9:4300050..4300118,-!p1@GLIS3!0.66!26.70!GLIS3;;chrX:106960180..106960197,-!p2@TSC22D3!0.66!15.64!TSC22D3;;chr6:91006518..91006570,-!p1@BACH2!0.66!9.15!BACH2;;chr16:54320675..54320715,-!p1@IRX3!0.66!8.39!IRX3;;chr8:106330656..106330684,+!p1@ZFPM2!0.65!10.30!ZFPM2;;chr3:157823517..157823562,-!p1@SHOX2!0.65!3.81!SHOX2;;chr2:237076992..237077008,-!p2@GBX2!0.65!3.43!GBX2;;chr3:189348969..189349018,+!p4@TP63!0.65!3.43!TP63;;chr7:27205136..27205164,-!p1@HOXA9!0.65!3.43!HOXA9;;chr11:16629369..16629392,-!p5@SOX6!0.65!3.43!SOX6;;chr11:46333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EB3L2;;chr8:72756267..72756296,-!p4@MSC!0.17!1.14!MSC;;chr15:57025823..57025832,-!p3@ZNF280D!0.17!1.14!ZNF280D;;chr2:27805866..27805879,+!p2@ZNF512!0.17!1.14!ZNF512;;chr12:56401175..56401225,+!p3@IKZF4!0.17!1.14!IKZF4;;chr12:66218573..66218596,+!p7@HMGA2!0.17!1.14!HMGA2;;chr10:3818891..3818895,-!p6@KLF6!0.17!0.76!KLF6;;chr11:120107344..120107351,+!p1@POU2F3!0.17!0.76!POU2F3;;chr5:137804405..137804444,+!p3@EGR1!0.17!0.76!EGR1;;chr5:150284461..150284481,-!p4@ZNF300!0.17!0.76!ZNF300;;chr5:92919100..92919135,+!p3@NR2F1!0.17!0.76!NR2F1;;chr5:92920256..92920282,+!p7@NR2F1!0.17!0.76!NR2F1;;chr6:15245797..15245818,+!p8@JARID2!0.17!0.76!JARID2;;chr7:100076873..100076880,-!p6@TSC22D4!0.17!0.76!TSC22D4;;chr8:28747944..28747955,+!p5@HMBOX1!0.17!0.76!HMBOX1;;chr1:67395833..67395851,+!p8@MIER1!0.17!0.76!MIER1;;chr20:62601309..62601320,-!p2@ZNF512B!0.17!0.76!ZNF512B;;chr3:37217344..37217370,-!p5@LRRFIP2!0.17!0.76!LRRFIP2;;chr3:101568349..101568365,+!p1@NFKBIZ!0.16!67.50!NFKBIZ;;chrX:53254373..53254406,-!p1@KDM5C!0.16!47.29!KDM5C;;chr17:56065540..56065627,-!p1@VEZF1!0.16!40.05!VEZF1;;chr7:4721885..4721945,+!p1@FOXK1!0.16!38.90!FOXK1;;chr16:67867749..67867852,-!p1@CENPT!0.16!29.37!CENPT;;chr7:148892653..148892729,+!p1@ZNF282!0.16!18.31!ZNF282;;chr11:47236584..47236679,+!p1@DDB2!0.16!13.73!DDB2;;chr10:105110831..105110885,-!p1@PCGF6!0.16!11.82!PCGF6;;chr4:38665769..38665801,+!p2@KLF3!0.16!11.06!KLF3;;chr19:18392236..18392248,-!p2@JUND!0.16!8.01!JUND;;chr8:28243661..28243709,-!p1@ZNF395!0.16!6.86!ZNF395;;chr2:157189180..157189290,-!p1@NR4A2!0.16!6.10!NR4A2;;chr17:16472486..16472533,-!p1@ZNF287!0.16!5.72!ZNF287;;chr19:36545128..36545203,-!p1@THAP8!0.16!5.34!THAP8;;chr16:2059797..2059837,-!p1@ZNF598!0.16!4.58!ZNF598;;chr9:137218341..137218361,+!p2@RXRA!0.16!4.58!RXRA;;chr4:38665883..38665922,+!p3@KLF3!0.16!4.20!KLF3;;chr19:56111680..56111716,+!p1@ZNF524!0.16!4.20!ZNF524;;chr4:57775059..57775139,+!p2@REST!0.16!3.81!REST;;chr19:19516507..19516539,+!p7@GATAD2A!0.16!3.05!GATAD2A;;chr19:21106081..21106115,+!p2@ZNF85!0.16!3.05!ZNF85;;chrX:153363188..153363203,-!p2@MECP2!0.16!2.29!MECP2;;chr6:12012536..12012554,+!p4@HIVEP1!0.16!2.29!HIVEP1;;chr20:3388579..3388619,-!p3@C20orf194!0.16!2.29!C20orf194;;chr16:79634595..79634620,-!p2@MAF!0.16!1.53!MAF;;chr19:37407172..37407217,-!p2@ZNF829!0.16!1.53!ZNF829;;chr3:107241993..107242023,+!p4@BBX!0.16!1.53!BBX;;chr3:150126022..150126034,+!p10@TSC22D2!0.16!1.14!TSC22D2;;chr4:57774884..57774924,+!p4@REST!0.16!1.14!REST;;chr19:57999082..57999095,+!p2@ZNF419!0.16!1.14!ZNF419;;chr12:56583297..56583304,-!p4@SMARCC2!0.16!1.14!SMARCC2;;chr15:64752927..64752950,+!p3@ZNF609!0.16!1.14!ZNF609;;chr18:56530136..56530199,+!p3@ZNF532!0.16!1.14!ZNF532;;chr17:40719165..40719168,+!p4@MLX!0.16!0.76!MLX;;chr18:45457558..45457570,-!p9@SMAD2!0.16!0.76!SMAD2;;chr18:56530573..56530591,+!p9@ZNF532!0.16!0.76!ZNF532;;chr19:23299814..23299844,+!p1@ZNF730!0.16!0.76!ZNF730;;chr1:6684918..6684936,+!p2@THAP3!0.16!0.76!THAP3;;chr9:2016758..2016782,+!p11@SMARCA2!0.16!0.76!SMARCA2;;chr9:16870659..16870675,-!p2@BNC2!0.16!0.76!BNC2;;chr10:97890311..97890324,+!p6@ZNF518A!0.16!0.76!ZNF518A;;chr11:19263192..19263222,-!p2@E2F8!0.16!0.76!E2F8;;chr6:157099113..157099126,+!p9@ARID1B!0.16!0.76!ARID1B;;chr6:28973366..28973394,-!p2@ZNF311!0.16!0.76!ZNF311;;chr7:101459263..101459310,+!p1@CUX1!0.15!75.90!CUX1;;chr11:118307179..118307223,+!p1@MLL!0.15!38.52!MLL;;chr7:77428149..77428220,+!p1@PHTF2!0.15!12.20!PHTF2;;chr19:1863591..1863611,-!p2@KLF16!0.15!11.44!KLF16;;chr3:44690211..44690267,+!p1@ZNF35!0.15!10.30!ZNF35;;chr4:140098339..140098392,-!p1@ELF2!0.15!9.92!ELF2;;chr4:146402997..146403020,+!p1@SMAD1!0.15!8.39!SMAD1;;chr19:14800849..14800917,+!p1@ZNF333!0.15!7.63!ZNF333;;chr11:62368696..62368759,-!p4@MTA2!0.15!7.25!MTA2;;chr4:2263861..2263883,-!p2@MXD4!0.15!6.86!MXD4;;chr11:58346525..58346570,+!p1@ZFP91!0.15!5.34!ZFP91;;chr2:66662249..66662267,+!p2@MEIS1!0.15!4.20!MEIS1;;chr2:174828836..174828885,-!p5@SP3!0.15!3.81!SP3;;chr10:105110890..105110914,-!p2@PCGF6!0.15!3.81!PCGF6;;chr1:8934931..8934947,-!p4@ENO1!0.15!3.43!ENO1;;chrX:134478706..134478736,+!p1@ZNF449!0.15!3.43!ZNF449;;chr19:40596789..40596825,-!p2@ZNF780A!0.15!3.05!ZNF780A;;chr8:28243934..28243993,-!p3@ZNF395!0.15!2.67!ZNF395;;chr6:20403727..20403769,+!p4@E2F3!0.15!2.29!E2F3;;chr2:242576431..242576458,-!p3@THAP4!0.15!2.29!THAP4;;chr7:150946015..150946070,-!p3@SMARCD3!0.15!1.91!SMARCD3;;chr1:151043266..151043295,+!p2@GABPB2!0.15!1.91!GABPB2;;chr19:55987998..55988026,+!p2@ZNF628!0.15!1.53!ZNF628;;chr1:33004734..33004807,+!p2@ZBTB8A!0.15!1.53!ZBTB8A;;chr5:142784101..142784130,-!p4@NR3C1!0.15!1.53!NR3C1;;chr2:231280954..231280965,+!p2@SP100!0.15!1.53!SP100;;chr2:46524506..46524514,+!p5@EPAS1!0.15!1.53!EPAS1;;chr15:31619535..31619569,+!p5@KLF13!0.15!1.53!KLF13;;chr15:56535468..56535521,-!p2@RFX7!0.15!1.53!RFX7;;chr19:31840130..31840160,-!p2@TSHZ3!0.15!1.14!TSHZ3;;chr19:44100548..44100581,+!p2@ZNF576!0.15!1.14!ZNF576;;chr14:24584138..24584192,-!p2@NRL!0.15!1.14!NRL;;chr22:29196492..29196503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|sample_dev_stage=
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0000335,UBERON:0002532,UBERON:0006603,UBERON:0010316
|sample_tissue=bone
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Line 66: Line 40:
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|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.90024673910627e-215!GO:0005737;cytoplasm;2.25045276682453e-178!GO:0043226;organelle;9.31094853357678e-173!GO:0043229;intracellular organelle;1.81447622441419e-172!GO:0043231;intracellular membrane-bound organelle;1.61920921601098e-169!GO:0043227;membrane-bound organelle;3.54559646297303e-169!GO:0044422;organelle part;6.0091633008027e-128!GO:0044446;intracellular organelle part;1.35141370416423e-126!GO:0044444;cytoplasmic part;1.63367764448754e-122!GO:0032991;macromolecular complex;7.98925473480524e-88!GO:0005515;protein binding;2.09381409932007e-81!GO:0043170;macromolecule metabolic process;4.44182690118573e-73!GO:0044237;cellular metabolic process;6.88264045020698e-73!GO:0044238;primary metabolic process;7.98044948218157e-73!GO:0030529;ribonucleoprotein complex;1.43943530137982e-66!GO:0043233;organelle lumen;2.94128160705076e-64!GO:0031974;membrane-enclosed lumen;2.94128160705076e-64!GO:0005634;nucleus;1.54478804492417e-62!GO:0044428;nuclear part;1.58683941998949e-61!GO:0005739;mitochondrion;1.04482792236764e-53!GO:0003723;RNA binding;1.07945304229044e-50!GO:0019538;protein metabolic process;1.33314249940444e-50!GO:0016043;cellular component organization and biogenesis;2.12410354273983e-48!GO:0031090;organelle membrane;2.6054217673291e-47!GO:0043234;protein complex;3.33121034322875e-47!GO:0033036;macromolecule localization;6.54653461627084e-46!GO:0044260;cellular macromolecule metabolic process;4.8402191125605e-45!GO:0015031;protein transport;7.44731080515817e-45!GO:0044267;cellular protein metabolic process;2.00517992820988e-44!GO:0008104;protein localization;9.92052836847901e-43!GO:0045184;establishment of protein localization;1.03334923573312e-42!GO:0043283;biopolymer metabolic process;6.23928229620839e-41!GO:0005840;ribosome;2.12296975556064e-40!GO:0046907;intracellular transport;3.59714953216857e-38!GO:0031981;nuclear lumen;8.57801003833857e-38!GO:0006412;translation;3.30004501529535e-37!GO:0044429;mitochondrial part;1.37922396976256e-35!GO:0006396;RNA processing;3.56859664022352e-35!GO:0003735;structural constituent of ribosome;8.81360640212891e-35!GO:0031967;organelle envelope;1.06229664198849e-33!GO:0031975;envelope;1.73534157267286e-33!GO:0005829;cytosol;8.47103250829259e-33!GO:0033279;ribosomal subunit;3.56808736701652e-31!GO:0009059;macromolecule biosynthetic process;7.3108966796646e-31!GO:0010467;gene expression;1.29451195939105e-30!GO:0016071;mRNA metabolic process;1.90783273011163e-30!GO:0043228;non-membrane-bound organelle;1.49943417495118e-29!GO:0043232;intracellular non-membrane-bound organelle;1.49943417495118e-29!GO:0006886;intracellular protein transport;1.99398338447452e-29!GO:0009058;biosynthetic process;6.7038234490969e-29!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.94953425617754e-29!GO:0006996;organelle organization and biogenesis;9.35980965232416e-29!GO:0008380;RNA splicing;1.87323922127921e-28!GO:0065003;macromolecular complex assembly;1.54934718182361e-26!GO:0051649;establishment of cellular localization;2.55785529648182e-26!GO:0051641;cellular localization;2.9217440512086e-26!GO:0006397;mRNA processing;3.89884330937772e-26!GO:0044249;cellular biosynthetic process;4.50395493517498e-26!GO:0005654;nucleoplasm;5.40506973508629e-24!GO:0005740;mitochondrial envelope;1.82039708087598e-23!GO:0022607;cellular component assembly;2.44521769316641e-23!GO:0000166;nucleotide binding;1.03486347116911e-22!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.34093539191399e-22!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.76419484376641e-22!GO:0031966;mitochondrial membrane;9.88655786407451e-22!GO:0007049;cell cycle;1.32262616436207e-21!GO:0019866;organelle inner membrane;1.42442442564213e-21!GO:0012505;endomembrane system;5.71258455839344e-21!GO:0006259;DNA metabolic process;1.7772022303964e-20!GO:0005681;spliceosome;2.73069802662921e-20!GO:0005783;endoplasmic reticulum;3.40995871001256e-20!GO:0006119;oxidative phosphorylation;3.63322395627847e-20!GO:0044451;nucleoplasm part;1.10132488073782e-19!GO:0005743;mitochondrial inner membrane;1.84575515199056e-19!GO:0006457;protein folding;2.73750843306174e-19!GO:0006512;ubiquitin cycle;9.80539144859011e-19!GO:0016462;pyrophosphatase activity;1.57436896618351e-18!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.86765890737498e-18!GO:0016817;hydrolase activity, acting on acid anhydrides;2.80836050101367e-18!GO:0044455;mitochondrial membrane part;2.84079568317192e-18!GO:0017111;nucleoside-triphosphatase activity;4.94454959540332e-18!GO:0044445;cytosolic part;7.77120798640516e-18!GO:0008134;transcription factor binding;7.93930157510176e-18!GO:0032553;ribonucleotide binding;1.28439920819596e-17!GO:0032555;purine ribonucleotide binding;1.28439920819596e-17!GO:0005794;Golgi apparatus;1.79896997112102e-17!GO:0017076;purine nucleotide binding;3.78375308389826e-17!GO:0015934;large ribosomal subunit;5.69503656502979e-17!GO:0044432;endoplasmic reticulum part;6.11139948820572e-17!GO:0016874;ligase activity;6.28434052815634e-17!GO:0022402;cell cycle process;8.71897913002774e-17!GO:0048770;pigment granule;1.25345373163967e-16!GO:0042470;melanosome;1.25345373163967e-16!GO:0043412;biopolymer modification;1.65155919140869e-16!GO:0000278;mitotic cell cycle;2.45860742382596e-16!GO:0048193;Golgi vesicle transport;2.85518722811797e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;3.9739954651278e-16!GO:0019941;modification-dependent protein catabolic process;8.25299302171037e-16!GO:0043632;modification-dependent macromolecule catabolic process;8.25299302171037e-16!GO:0044257;cellular protein catabolic process;8.69205637825958e-16!GO:0006511;ubiquitin-dependent protein catabolic process;9.17636780646525e-16!GO:0044265;cellular macromolecule catabolic process;1.23039016499029e-15!GO:0051082;unfolded protein binding;1.67351438704586e-15!GO:0022618;protein-RNA complex assembly;2.60732349758426e-15!GO:0043285;biopolymer catabolic process;2.86585720566947e-15!GO:0015935;small ribosomal subunit;2.96908517678929e-15!GO:0006464;protein modification process;2.9920787703443e-15!GO:0005746;mitochondrial respiratory chain;8.24287788278828e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.01576305246702e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.0978385653442e-14!GO:0005524;ATP binding;1.0981790821184e-14!GO:0031980;mitochondrial lumen;1.57616624168732e-14!GO:0005759;mitochondrial matrix;1.57616624168732e-14!GO:0006605;protein targeting;1.7640932229961e-14!GO:0003676;nucleic acid binding;2.9827791501827e-14!GO:0032559;adenyl ribonucleotide binding;3.13373721787958e-14!GO:0030163;protein catabolic process;3.13373721787958e-14!GO:0016192;vesicle-mediated transport;3.51149632414518e-14!GO:0009057;macromolecule catabolic process;5.75742039550567e-14!GO:0005730;nucleolus;8.30155922937939e-14!GO:0050136;NADH dehydrogenase (quinone) activity;8.30155922937939e-14!GO:0003954;NADH dehydrogenase activity;8.30155922937939e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.30155922937939e-14!GO:0030554;adenyl nucleotide binding;1.23732638907709e-13!GO:0043687;post-translational protein modification;1.29585915503277e-13!GO:0000087;M phase of mitotic cell cycle;2.19866027254446e-13!GO:0007067;mitosis;2.69798385962535e-13!GO:0016070;RNA metabolic process;3.18294172469581e-13!GO:0051186;cofactor metabolic process;3.70695869712979e-13!GO:0008135;translation factor activity, nucleic acid binding;6.861324253536e-13!GO:0051301;cell division;7.97923529861156e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.15581461464311e-12!GO:0005793;ER-Golgi intermediate compartment;2.44235313011033e-12!GO:0005761;mitochondrial ribosome;3.45076998772275e-12!GO:0000313;organellar ribosome;3.45076998772275e-12!GO:0006974;response to DNA damage stimulus;4.68844469448578e-12!GO:0044248;cellular catabolic process;5.56121902310818e-12!GO:0030964;NADH dehydrogenase complex (quinone);5.56121902310818e-12!GO:0045271;respiratory chain complex I;5.56121902310818e-12!GO:0005747;mitochondrial respiratory chain complex I;5.56121902310818e-12!GO:0008639;small protein conjugating enzyme activity;7.728817374876e-12!GO:0042775;organelle ATP synthesis coupled electron transport;7.728817374876e-12!GO:0042773;ATP synthesis coupled electron transport;7.728817374876e-12!GO:0003712;transcription cofactor activity;9.50564599023615e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.10458029511384e-11!GO:0004842;ubiquitin-protein ligase activity;1.47461058526504e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.71559980893312e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;2.14294408004371e-11!GO:0019787;small conjugating protein ligase activity;3.3435709875054e-11!GO:0022403;cell cycle phase;3.35631575447127e-11!GO:0005635;nuclear envelope;3.51696916943419e-11!GO:0005789;endoplasmic reticulum membrane;6.37679672547187e-11!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.83112794542942e-11!GO:0006913;nucleocytoplasmic transport;9.27691525179082e-11!GO:0012501;programmed cell death;9.52165954790057e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;1.12129529297375e-10!GO:0000375;RNA splicing, via transesterification reactions;1.12129529297375e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.12129529297375e-10!GO:0051169;nuclear transport;1.60448641310458e-10!GO:0006732;coenzyme metabolic process;1.93103709063906e-10!GO:0006915;apoptosis;2.15020224345004e-10!GO:0009055;electron carrier activity;2.62938032235247e-10!GO:0051726;regulation of cell cycle;2.85185808174127e-10!GO:0044453;nuclear membrane part;3.39531837894022e-10!GO:0000074;regulation of progression through cell cycle;3.43318718248552e-10!GO:0016881;acid-amino acid ligase activity;3.55290797763353e-10!GO:0031965;nuclear membrane;3.74970235530313e-10!GO:0015630;microtubule cytoskeleton;4.61159719628713e-10!GO:0008219;cell death;5.99582739778709e-10!GO:0016265;death;5.99582739778709e-10!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.41035412532261e-10!GO:0003743;translation initiation factor activity;7.21756721877584e-10!GO:0048523;negative regulation of cellular process;1.40464959768424e-09!GO:0006281;DNA repair;2.05632946210762e-09!GO:0005788;endoplasmic reticulum lumen;2.15857648391408e-09!GO:0000279;M phase;2.64862077064364e-09!GO:0006366;transcription from RNA polymerase II promoter;2.65088852738802e-09!GO:0005768;endosome;3.07698834629017e-09!GO:0006461;protein complex assembly;3.59982390010615e-09!GO:0042623;ATPase activity, coupled;3.63210797569433e-09!GO:0006413;translational initiation;3.63870273602663e-09!GO:0016887;ATPase activity;3.72344878671921e-09!GO:0051276;chromosome organization and biogenesis;4.15897934707084e-09!GO:0008565;protein transporter activity;4.31945234507413e-09!GO:0009259;ribonucleotide metabolic process;4.41141575337606e-09!GO:0016604;nuclear body;6.35030664614681e-09!GO:0005694;chromosome;6.9045632670739e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;7.62042865732449e-09!GO:0017038;protein import;7.62042865732449e-09!GO:0006446;regulation of translational initiation;7.91422227801014e-09!GO:0003714;transcription corepressor activity;1.17475035376276e-08!GO:0006888;ER to Golgi vesicle-mediated transport;1.38515026673509e-08!GO:0009150;purine ribonucleotide metabolic process;1.40560836632e-08!GO:0030120;vesicle coat;1.75442224282968e-08!GO:0030662;coated vesicle membrane;1.75442224282968e-08!GO:0006163;purine nucleotide metabolic process;2.60303363559757e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.63688031172679e-08!GO:0009719;response to endogenous stimulus;3.06587082248664e-08!GO:0048519;negative regulation of biological process;4.1073270930976e-08!GO:0009260;ribonucleotide biosynthetic process;4.77626878517365e-08!GO:0042254;ribosome biogenesis and assembly;5.35217808963695e-08!GO:0009152;purine ribonucleotide biosynthetic process;5.37104731557591e-08!GO:0050794;regulation of cellular process;5.4183417924164e-08!GO:0009199;ribonucleoside triphosphate metabolic process;5.86880576643663e-08!GO:0009141;nucleoside triphosphate metabolic process;6.20858757038769e-08!GO:0044431;Golgi apparatus part;6.83970366708935e-08!GO:0005643;nuclear pore;6.92695689134127e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.31778457202451e-08!GO:0009144;purine nucleoside triphosphate metabolic process;8.31778457202451e-08!GO:0006325;establishment and/or maintenance of chromatin architecture;8.85627823050243e-08!GO:0015986;ATP synthesis coupled proton transport;9.18611296415009e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;9.18611296415009e-08!GO:0006164;purine nucleotide biosynthetic process;1.00901826470183e-07!GO:0032446;protein modification by small protein conjugation;1.09342212621124e-07!GO:0044427;chromosomal part;1.18014737697246e-07!GO:0009142;nucleoside triphosphate biosynthetic process;1.27350229599335e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.27350229599335e-07!GO:0003924;GTPase activity;1.37700278331083e-07!GO:0006793;phosphorus metabolic process;1.42438045911061e-07!GO:0006796;phosphate metabolic process;1.42438045911061e-07!GO:0016567;protein ubiquitination;1.77759016991817e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.80794727067331e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.80794727067331e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.82509079839587e-07!GO:0004812;aminoacyl-tRNA ligase activity;1.82509079839587e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.82509079839587e-07!GO:0016607;nuclear speck;1.83404410491056e-07!GO:0000151;ubiquitin ligase complex;1.87188692097468e-07!GO:0065002;intracellular protein transport across a membrane;2.68833868783098e-07!GO:0019829;cation-transporting ATPase activity;2.69362655704592e-07!GO:0006323;DNA packaging;2.71777823318273e-07!GO:0005667;transcription factor complex;2.77281314593753e-07!GO:0043038;amino acid activation;2.77419074738076e-07!GO:0006418;tRNA aminoacylation for protein translation;2.77419074738076e-07!GO:0043039;tRNA aminoacylation;2.77419074738076e-07!GO:0006260;DNA replication;2.89064643235476e-07!GO:0048475;coated membrane;3.73156516975943e-07!GO:0030117;membrane coat;3.73156516975943e-07!GO:0009056;catabolic process;3.87599792825294e-07!GO:0006399;tRNA metabolic process;4.24449658389611e-07!GO:0005798;Golgi-associated vesicle;4.85894493681575e-07!GO:0046034;ATP metabolic process;4.85894493681575e-07!GO:0015078;hydrogen ion transmembrane transporter activity;5.03535868028304e-07!GO:0004386;helicase activity;5.571021333089e-07!GO:0016564;transcription repressor activity;6.61315042596212e-07!GO:0005819;spindle;6.64195298553158e-07!GO:0051188;cofactor biosynthetic process;6.67391227590326e-07!GO:0045786;negative regulation of progression through cell cycle;7.31219490977715e-07!GO:0046930;pore complex;7.49471136578596e-07!GO:0006754;ATP biosynthetic process;8.87780219014949e-07!GO:0006753;nucleoside phosphate metabolic process;8.87780219014949e-07!GO:0031252;leading edge;1.04726899927118e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.06664564030527e-06!GO:0006403;RNA localization;1.14017188446717e-06!GO:0050657;nucleic acid transport;1.27190217389971e-06!GO:0051236;establishment of RNA localization;1.27190217389971e-06!GO:0050658;RNA transport;1.27190217389971e-06!GO:0031988;membrane-bound vesicle;1.2726784632651e-06!GO:0009060;aerobic respiration;1.2847428611856e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.75807796164386e-06!GO:0044440;endosomal part;2.00586153782184e-06!GO:0010008;endosome membrane;2.00586153782184e-06!GO:0005773;vacuole;2.01439801422978e-06!GO:0051246;regulation of protein metabolic process;2.38241177367438e-06!GO:0051170;nuclear import;2.569203165876e-06!GO:0030532;small nuclear ribonucleoprotein complex;2.63250663174937e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.72574560480933e-06!GO:0007005;mitochondrion organization and biogenesis;2.72574560480933e-06!GO:0005815;microtubule organizing center;2.80772662948995e-06!GO:0043566;structure-specific DNA binding;2.84247385396973e-06!GO:0006606;protein import into nucleus;2.93966019144237e-06!GO:0043623;cellular protein complex assembly;3.00778007302738e-06!GO:0005813;centrosome;3.05816809911964e-06!GO:0016310;phosphorylation;3.05966903219244e-06!GO:0008026;ATP-dependent helicase activity;3.07252281646723e-06!GO:0005839;proteasome core complex (sensu Eukaryota);3.75170074386374e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.16699758942826e-06!GO:0005770;late endosome;5.44092337975446e-06!GO:0016568;chromatin modification;5.51590665332846e-06!GO:0031982;vesicle;5.51590665332846e-06!GO:0043067;regulation of programmed cell death;5.97468432373787e-06!GO:0031410;cytoplasmic vesicle;6.11984892037106e-06!GO:0045333;cellular respiration;6.53128259594016e-06!GO:0000139;Golgi membrane;6.54604699439683e-06!GO:0003697;single-stranded DNA binding;7.19041789647809e-06!GO:0051789;response to protein stimulus;7.93510079335642e-06!GO:0006986;response to unfolded protein;7.93510079335642e-06!GO:0005525;GTP binding;8.62583594614048e-06!GO:0006099;tricarboxylic acid cycle;8.6364391292627e-06!GO:0046356;acetyl-CoA catabolic process;8.6364391292627e-06!GO:0051187;cofactor catabolic process;9.24297090652961e-06!GO:0042981;regulation of apoptosis;9.26617600070775e-06!GO:0045259;proton-transporting ATP synthase complex;1.04316647991751e-05!GO:0000245;spliceosome assembly;1.04867010637618e-05!GO:0031324;negative regulation of cellular metabolic process;1.07580895044774e-05!GO:0016740;transferase activity;1.08606008525888e-05!GO:0008361;regulation of cell size;1.10078074687413e-05!GO:0007010;cytoskeleton organization and biogenesis;1.13436791225679e-05!GO:0043069;negative regulation of programmed cell death;1.25163846635542e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.2612389448108e-05!GO:0009109;coenzyme catabolic process;1.31604709996469e-05!GO:0009108;coenzyme biosynthetic process;1.49908168340384e-05!GO:0006752;group transfer coenzyme metabolic process;1.50064130423699e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.50482518218209e-05!GO:0006613;cotranslational protein targeting to membrane;1.6239632882803e-05!GO:0006084;acetyl-CoA metabolic process;1.87622950592111e-05!GO:0000323;lytic vacuole;1.97452862197782e-05!GO:0005764;lysosome;1.97452862197782e-05!GO:0004298;threonine endopeptidase activity;2.03515610326191e-05!GO:0016049;cell growth;2.05523861016309e-05!GO:0016787;hydrolase activity;2.15239731571715e-05!GO:0030133;transport vesicle;2.40756037211223e-05!GO:0005769;early endosome;2.41336656406578e-05!GO:0050789;regulation of biological process;2.41459058003705e-05!GO:0019899;enzyme binding;2.4920132632016e-05!GO:0009117;nucleotide metabolic process;2.64964459525404e-05!GO:0030867;rough endoplasmic reticulum membrane;2.82026193509829e-05!GO:0051028;mRNA transport;3.25309283268467e-05!GO:0043066;negative regulation of apoptosis;3.25523779765478e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.39900145897812e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;3.463935490794e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.55546085581071e-05!GO:0065004;protein-DNA complex assembly;4.50805077720079e-05!GO:0016563;transcription activator activity;4.65841614257211e-05!GO:0005762;mitochondrial large ribosomal subunit;4.73929746578131e-05!GO:0000315;organellar large ribosomal subunit;4.73929746578131e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;5.58469802125653e-05!GO:0032561;guanyl ribonucleotide binding;5.59584468720766e-05!GO:0019001;guanyl nucleotide binding;5.59584468720766e-05!GO:0008654;phospholipid biosynthetic process;6.04320298150211e-05!GO:0001558;regulation of cell growth;6.86673064960347e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.37324590566271e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.61948134961826e-05!GO:0000785;chromatin;7.91509152493725e-05!GO:0005905;coated pit;7.93337916023071e-05!GO:0045454;cell redox homeostasis;8.633965078031e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.633965078031e-05!GO:0006916;anti-apoptosis;8.93542019601087e-05!GO:0033116;ER-Golgi intermediate compartment membrane;9.19950443501408e-05!GO:0051329;interphase of mitotic cell cycle;9.41471160786198e-05!GO:0009892;negative regulation of metabolic process;0.000100826948895921!GO:0016491;oxidoreductase activity;0.000105082674452818!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000105511764973996!GO:0007051;spindle organization and biogenesis;0.000112490277886496!GO:0008092;cytoskeletal protein binding;0.000113354152938426!GO:0006333;chromatin assembly or disassembly;0.000127432859265416!GO:0016481;negative regulation of transcription;0.000127432859265416!GO:0006364;rRNA processing;0.000131262479238437!GO:0005048;signal sequence binding;0.000178716211021117!GO:0030663;COPI coated vesicle membrane;0.000196528862378308!GO:0030126;COPI vesicle coat;0.000196528862378308!GO:0016072;rRNA metabolic process;0.00023811940136784!GO:0030036;actin cytoskeleton organization and biogenesis;0.000238175628204785!GO:0006891;intra-Golgi vesicle-mediated transport;0.000244647050350158!GO:0005874;microtubule;0.000250039038963108!GO:0003713;transcription coactivator activity;0.000251962970856508!GO:0008250;oligosaccharyl transferase complex;0.00026183004350369!GO:0016779;nucleotidyltransferase activity;0.000267036748219791!GO:0051325;interphase;0.000276379993660968!GO:0000075;cell cycle checkpoint;0.000296278437006474!GO:0043021;ribonucleoprotein binding;0.000302848431673927!GO:0005885;Arp2/3 protein complex;0.00031194002064027!GO:0004576;oligosaccharyl transferase activity;0.000325877702912282!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000325877702912282!GO:0030137;COPI-coated vesicle;0.000327192551928587!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00036395988891131!GO:0015399;primary active transmembrane transporter activity;0.00036395988891131!GO:0016859;cis-trans isomerase activity;0.000392348913264356!GO:0003724;RNA helicase activity;0.000393760128332329!GO:0051427;hormone receptor binding;0.000400414643357355!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00041714542949809!GO:0006612;protein targeting to membrane;0.000418142497943769!GO:0000775;chromosome, pericentric region;0.000428063506779595!GO:0016853;isomerase activity;0.00043596651386804!GO:0007243;protein kinase cascade;0.000462358848689465!GO:0015980;energy derivation by oxidation of organic compounds;0.000487674956488401!GO:0048522;positive regulation of cellular process;0.000511194538382186!GO:0044262;cellular carbohydrate metabolic process;0.000519794912306816!GO:0007050;cell cycle arrest;0.000556083009502534!GO:0051168;nuclear export;0.000627312203734903!GO:0048471;perinuclear region of cytoplasm;0.000634030097744343!GO:0006091;generation of precursor metabolites and energy;0.000741167716042232!GO:0035257;nuclear hormone receptor binding;0.00077112769044663!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00077250879998046!GO:0016044;membrane organization and biogenesis;0.000773404559887149!GO:0000314;organellar small ribosomal subunit;0.00081939111698586!GO:0005763;mitochondrial small ribosomal subunit;0.00081939111698586!GO:0040008;regulation of growth;0.000831425228722934!GO:0030029;actin filament-based process;0.00104373665150287!GO:0008022;protein C-terminus binding;0.00107145088094637!GO:0030132;clathrin coat of coated pit;0.00112044704991928!GO:0019222;regulation of metabolic process;0.00113449258356807!GO:0046474;glycerophospholipid biosynthetic process;0.00115503581827306!GO:0018196;peptidyl-asparagine modification;0.00116834565317598!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00116834565317598!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00116834565317598!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00119551502435074!GO:0006383;transcription from RNA polymerase III promoter;0.00127574035500607!GO:0003729;mRNA binding;0.00131133448067022!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00134737301539704!GO:0015631;tubulin binding;0.00136092991513557!GO:0001726;ruffle;0.00137749320686824!GO:0031072;heat shock protein binding;0.00139688394960158!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00141020821166768!GO:0030658;transport vesicle membrane;0.00148876114583008!GO:0019867;outer membrane;0.00156457198829456!GO:0007093;mitotic cell cycle checkpoint;0.0016082224289624!GO:0003899;DNA-directed RNA polymerase activity;0.00163614032066709!GO:0007088;regulation of mitosis;0.00165624686595818!GO:0004674;protein serine/threonine kinase activity;0.00165624686595818!GO:0051920;peroxiredoxin activity;0.00174172828360462!GO:0065009;regulation of a molecular function;0.00183147573309187!GO:0006839;mitochondrial transport;0.00184086602217195!GO:0042802;identical protein binding;0.00186915966842101!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00194757044792703!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00197898350201866!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00197898350201866!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00197898350201866!GO:0046489;phosphoinositide biosynthetic process;0.00198489588880618!GO:0051252;regulation of RNA metabolic process;0.00201499974682603!GO:0000059;protein import into nucleus, docking;0.00202598854857715!GO:0031968;organelle outer membrane;0.00203991280605966!GO:0006509;membrane protein ectodomain proteolysis;0.00207657227861066!GO:0033619;membrane protein proteolysis;0.00207657227861066!GO:0016197;endosome transport;0.00212889522127833!GO:0000776;kinetochore;0.00215742142554972!GO:0016363;nuclear matrix;0.00216819448909695!GO:0048487;beta-tubulin binding;0.00219388249563699!GO:0043681;protein import into mitochondrion;0.00225327309990719!GO:0043492;ATPase activity, coupled to movement of substances;0.00227895847942735!GO:0003690;double-stranded DNA binding;0.00252139416401567!GO:0030134;ER to Golgi transport vesicle;0.00254881918957383!GO:0007264;small GTPase mediated signal transduction;0.00281160732639737!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00283365932292057!GO:0007006;mitochondrial membrane organization and biogenesis;0.00286654239462242!GO:0005791;rough endoplasmic reticulum;0.00322002473558471!GO:0030176;integral to endoplasmic reticulum membrane;0.00330079744543145!GO:0006892;post-Golgi vesicle-mediated transport;0.00330079744543145!GO:0031543;peptidyl-proline dioxygenase activity;0.00334257863761967!GO:0008047;enzyme activator activity;0.00335801772033692!GO:0019843;rRNA binding;0.00343481748737492!GO:0000287;magnesium ion binding;0.00347761003969329!GO:0043284;biopolymer biosynthetic process;0.00348666324132933!GO:0005637;nuclear inner membrane;0.003710244540298!GO:0048500;signal recognition particle;0.00378100766999222!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00393986450967826!GO:0017166;vinculin binding;0.00414457596775581!GO:0005741;mitochondrial outer membrane;0.00414707398587377!GO:0003682;chromatin binding;0.00416077622661866!GO:0000910;cytokinesis;0.00427035467046161!GO:0030660;Golgi-associated vesicle membrane;0.00432782630192842!GO:0006261;DNA-dependent DNA replication;0.00442755129660605!GO:0045045;secretory pathway;0.0044606836966777!GO:0030127;COPII vesicle coat;0.00467237092513231!GO:0012507;ER to Golgi transport vesicle membrane;0.00467237092513231!GO:0006334;nucleosome assembly;0.00473822194675976!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00477506023873353!GO:0030027;lamellipodium;0.00481526185338635!GO:0030145;manganese ion binding;0.00484850445422168!GO:0008186;RNA-dependent ATPase activity;0.00484850445422168!GO:0008139;nuclear localization sequence binding;0.00494594439058188!GO:0004177;aminopeptidase activity;0.00524163278718825!GO:0007040;lysosome organization and biogenesis;0.0055017550035442!GO:0015992;proton transport;0.00568831346177823!GO:0009967;positive regulation of signal transduction;0.00568831346177823!GO:0006818;hydrogen transport;0.00581444012445498!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00581491085545844!GO:0007030;Golgi organization and biogenesis;0.0060021987280721!GO:0019798;procollagen-proline dioxygenase activity;0.00613568650484947!GO:0031902;late endosome membrane;0.00617790195955629!GO:0008287;protein serine/threonine phosphatase complex;0.00667274841917948!GO:0031901;early endosome membrane;0.00670570627431553!GO:0043488;regulation of mRNA stability;0.00670570627431553!GO:0043487;regulation of RNA stability;0.00670570627431553!GO:0006497;protein amino acid lipidation;0.00705994879084391!GO:0005583;fibrillar collagen;0.00734007948327974!GO:0007052;mitotic spindle organization and biogenesis;0.00746910346374698!GO:0051540;metal cluster binding;0.00755255374681629!GO:0051536;iron-sulfur cluster binding;0.00755255374681629!GO:0045892;negative regulation of transcription, DNA-dependent;0.00790201546401733!GO:0065007;biological regulation;0.00797559834486338!GO:0006402;mRNA catabolic process;0.00798032216940225!GO:0006626;protein targeting to mitochondrion;0.00810154489534258!GO:0051052;regulation of DNA metabolic process;0.00818323364789122!GO:0031418;L-ascorbic acid binding;0.00821477920556144!GO:0003684;damaged DNA binding;0.00830116922778546!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00830116922778546!GO:0045047;protein targeting to ER;0.00830116922778546!GO:0032940;secretion by cell;0.00842869677067761!GO:0009165;nucleotide biosynthetic process;0.00856591153978807!GO:0046483;heterocycle metabolic process;0.00875738144925178!GO:0000082;G1/S transition of mitotic cell cycle;0.0090104355046884!GO:0006650;glycerophospholipid metabolic process;0.00907723906570164!GO:0031497;chromatin assembly;0.00920073391263564!GO:0006352;transcription initiation;0.00931402263662285!GO:0006354;RNA elongation;0.00931402263662285!GO:0005869;dynactin complex;0.00942146451838204!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00974740778519973!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00974740778519973!GO:0005096;GTPase activator activity;0.00992063305367504!GO:0003746;translation elongation factor activity;0.0100613275107168!GO:0000049;tRNA binding;0.0101424679855114!GO:0022890;inorganic cation transmembrane transporter activity;0.010380917704628!GO:0006607;NLS-bearing substrate import into nucleus;0.0108061690207717!GO:0006302;double-strand break repair;0.0108694983221357!GO:0030659;cytoplasmic vesicle membrane;0.0108800390907407!GO:0030118;clathrin coat;0.0111022026478679!GO:0005774;vacuolar membrane;0.0111129927913768!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0111207425124903!GO:0005876;spindle microtubule;0.0111332800013745!GO:0007033;vacuole organization and biogenesis;0.0113488140931309!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0113892429506642!GO:0030521;androgen receptor signaling pathway;0.0114638557021684!GO:0004004;ATP-dependent RNA helicase activity;0.0115925899018072!GO:0006414;translational elongation;0.0117584519885002!GO:0006595;polyamine metabolic process;0.0118141801109942!GO:0016272;prefoldin complex;0.0118351621087054!GO:0007017;microtubule-based process;0.0122667378640224!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0125419644200987!GO:0006506;GPI anchor biosynthetic process;0.0125993636429882!GO:0051087;chaperone binding;0.0130176506578932!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0131468580903537!GO:0048468;cell development;0.0133024681742954!GO:0005684;U2-dependent spliceosome;0.0135411555438993!GO:0006611;protein export from nucleus;0.013573510346811!GO:0046467;membrane lipid biosynthetic process;0.013573510346811!GO:0031529;ruffle organization and biogenesis;0.0135844421939681!GO:0007034;vacuolar transport;0.0138115059052619!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0141034025213627!GO:0044433;cytoplasmic vesicle part;0.0147627537965458!GO:0006505;GPI anchor metabolic process;0.0151148533429755!GO:0007178;transmembrane receptor protein serine/threonine kinase signaling pathway;0.0153034405050693!GO:0005862;muscle thin filament tropomyosin;0.0153349588858905!GO:0008312;7S RNA binding;0.0156212964115308!GO:0030384;phosphoinositide metabolic process;0.0162100851071596!GO:0035258;steroid hormone receptor binding;0.0162617633509929!GO:0050790;regulation of catalytic activity;0.0162617633509929!GO:0043022;ribosome binding;0.0164980471487281!GO:0030880;RNA polymerase complex;0.0164980471487281!GO:0030125;clathrin vesicle coat;0.0166244432949184!GO:0030665;clathrin coated vesicle membrane;0.0166244432949184!GO:0008180;signalosome;0.0166878400563986!GO:0030032;lamellipodium biogenesis;0.0167243574757298!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0171225611832822!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0171225611832822!GO:0000159;protein phosphatase type 2A complex;0.01712441096766!GO:0008601;protein phosphatase type 2A regulator activity;0.017237660420252!GO:0006740;NADPH regeneration;0.0179336086406368!GO:0006098;pentose-phosphate shunt;0.0179336086406368!GO:0000792;heterochromatin;0.0181841549492606!GO:0051101;regulation of DNA binding;0.0183690849655626!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0186109828873926!GO:0006897;endocytosis;0.019022431346195!GO:0010324;membrane invagination;0.019022431346195!GO:0046519;sphingoid metabolic process;0.0191750664926138!GO:0016301;kinase activity;0.0194655603173152!GO:0042158;lipoprotein biosynthetic process;0.0201606344506191!GO:0000922;spindle pole;0.02038676354613!GO:0032906;transforming growth factor-beta2 production;0.0211278105259725!GO:0032909;regulation of transforming growth factor-beta2 production;0.0211278105259725!GO:0001666;response to hypoxia;0.0213565584411519!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0213565584411519!GO:0015002;heme-copper terminal oxidase activity;0.0213565584411519!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0213565584411519!GO:0004129;cytochrome-c oxidase activity;0.0213565584411519!GO:0031625;ubiquitin protein ligase binding;0.0216104459511081!GO:0003711;transcription elongation regulator activity;0.0217240646797578!GO:0008632;apoptotic program;0.0220867219936949!GO:0003678;DNA helicase activity;0.0222450513958577!GO:0012506;vesicle membrane;0.022612510538661!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0226653615415336!GO:0005832;chaperonin-containing T-complex;0.0230317639187874!GO:0051128;regulation of cellular component organization and biogenesis;0.0230785132983062!GO:0005856;cytoskeleton;0.0231887880948431!GO:0016311;dephosphorylation;0.023699020200302!GO:0016791;phosphoric monoester hydrolase activity;0.023699020200302!GO:0044437;vacuolar part;0.0237628085951428!GO:0048518;positive regulation of biological process;0.0238141353143804!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0239112161069415!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0241087149562372!GO:0003779;actin binding;0.024171410927287!GO:0006289;nucleotide-excision repair;0.0247827149037088!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0248915973336087!GO:0007041;lysosomal transport;0.0249547203204868!GO:0006401;RNA catabolic process;0.0250950671174936!GO:0005875;microtubule associated complex;0.0253228231310151!GO:0018193;peptidyl-amino acid modification;0.0253799287479584!GO:0045941;positive regulation of transcription;0.0254345258808956!GO:0007160;cell-matrix adhesion;0.0258644267901627!GO:0031589;cell-substrate adhesion;0.0260622324470085!GO:0045893;positive regulation of transcription, DNA-dependent;0.0262741210641307!GO:0005586;collagen type III;0.026734401847524!GO:0005801;cis-Golgi network;0.0268921731724591!GO:0030140;trans-Golgi network transport vesicle;0.0278297731779843!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0284393536013959!GO:0007021;tubulin folding;0.0291429233356825!GO:0031575;G1/S transition checkpoint;0.0296284005429843!GO:0006672;ceramide metabolic process;0.0298870560609234!GO:0000118;histone deacetylase complex;0.0300568450282446!GO:0003923;GPI-anchor transamidase activity;0.0300568450282446!GO:0016255;attachment of GPI anchor to protein;0.0300568450282446!GO:0042765;GPI-anchor transamidase complex;0.0300568450282446!GO:0022415;viral reproductive process;0.0300793981197718!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0306323082666376!GO:0000428;DNA-directed RNA polymerase complex;0.0306323082666376!GO:0050811;GABA receptor binding;0.0314237318421829!GO:0000209;protein polyubiquitination;0.0315922131078581!GO:0007265;Ras protein signal transduction;0.0317286278622378!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0325666388733391!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0325666388733391!GO:0016251;general RNA polymerase II transcription factor activity;0.0328240414160813!GO:0030518;steroid hormone receptor signaling pathway;0.0328621500471222!GO:0035035;histone acetyltransferase binding;0.032994185753116!GO:0045792;negative regulation of cell size;0.0331092724986701!GO:0031323;regulation of cellular metabolic process;0.0331936225138883!GO:0030041;actin filament polymerization;0.0332031227623422!GO:0046822;regulation of nucleocytoplasmic transport;0.0337671342946792!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0339027151662814!GO:0005784;translocon complex;0.0359651433328654!GO:0005765;lysosomal membrane;0.0359651433328654!GO:0003756;protein disulfide isomerase activity;0.0365746133429023!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0365746133429023!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0369665209744804!GO:0030308;negative regulation of cell growth;0.0374020226145478!GO:0009225;nucleotide-sugar metabolic process;0.0375270497389705!GO:0031970;organelle envelope lumen;0.0375639151290057!GO:0045334;clathrin-coated endocytic vesicle;0.0375786169066398!GO:0007059;chromosome segregation;0.0378456078557065!GO:0006007;glucose catabolic process;0.0382806958064737!GO:0046983;protein dimerization activity;0.0388596549291342!GO:0005099;Ras GTPase activator activity;0.0392851888422376!GO:0003702;RNA polymerase II transcription factor activity;0.0395184888685563!GO:0006376;mRNA splice site selection;0.0395184888685563!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0395184888685563!GO:0030911;TPR domain binding;0.0395191059898139!GO:0004722;protein serine/threonine phosphatase activity;0.0398193282588538!GO:0032507;maintenance of cellular protein localization;0.040270126967724!GO:0000339;RNA cap binding;0.0405120052066626!GO:0008017;microtubule binding;0.0408446412337647!GO:0006405;RNA export from nucleus;0.0408509322309737!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0416395226344665!GO:0006778;porphyrin metabolic process;0.0424638208801129!GO:0033013;tetrapyrrole metabolic process;0.0424638208801129!GO:0051287;NAD binding;0.0427108601043783!GO:0005669;transcription factor TFIID complex;0.0430597944886229!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0431807310952909!GO:0044452;nucleolar part;0.0440827576489218!GO:0042770;DNA damage response, signal transduction;0.0442797407216081!GO:0005657;replication fork;0.0450130036908836!GO:0050681;androgen receptor binding;0.0450130036908836!GO:0006284;base-excision repair;0.0450246897294398!GO:0005588;collagen type V;0.0454266975480967!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0455141397289329!GO:0006979;response to oxidative stress;0.0456684029178079!GO:0043624;cellular protein complex disassembly;0.0462266062060742!GO:0051235;maintenance of localization;0.0462982364654555!GO:0030833;regulation of actin filament polymerization;0.0470406610883252!GO:0030433;ER-associated protein catabolic process;0.0471973937463034!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0471973937463034!GO:0030508;thiol-disulfide exchange intermediate activity;0.0473170357277808!GO:0008286;insulin receptor signaling pathway;0.0474405662378629!GO:0046426;negative regulation of JAK-STAT cascade;0.0481883978956094!GO:0005811;lipid particle;0.0494039871201414!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0496195892898422!GO:0010257;NADH dehydrogenase complex assembly;0.0496195892898422!GO:0033108;mitochondrial respiratory chain complex assembly;0.0496195892898422
|sample_id=10704
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=bone
|top_motifs=TAL1_TCF{3,4,12}:2.14352434187;NKX3-1:2.10128903917;PPARG:2.06061635208;EVI1:2.017481083;EN1,2:1.59306728583;ESR1:1.54344577134;HOX{A5,B5}:1.2425766273;AIRE:1.19809570799;GLI1..3:1.18410705753;NR6A1:1.15383727785;GTF2A1,2:1.150598869;HOX{A4,D4}:1.1067471792;FOXD3:1.01801942603;MYBL2:1.01332922197;HMGA1,2:0.973010108713;HBP1_HMGB_SSRP1_UBTF:0.960938406709;POU5F1:0.944796409927;ZNF384:0.936319129788;MYB:0.886591497601;MTE{core}:0.877139302939;VSX1,2:0.835202644439;UFEwm:0.826965645591;TEAD1:0.822062429521;ADNP_IRX_SIX_ZHX:0.82099582318;ZBTB16:0.790517350022;RXR{A,B,G}:0.786988403745;TFCP2:0.786411655313;PAX3,7:0.775996480525;FOXA2:0.759818795198;NFATC1..3:0.734526110315;TFAP2B:0.733751838921;TP53:0.731201028777;PAX8:0.730449379318;PDX1:0.728442889236;NR3C1:0.725809344931;ATF6:0.725028866639;NFE2L1:0.699807631611;TFDP1:0.690843528423;NKX3-2:0.681847360904;XBP1:0.643974386863;NKX2-2,8:0.640910038249;DBP:0.630454509009;PAX4:0.62898072976;ZNF148:0.615395113965;HIC1:0.600828751791;POU3F1..4:0.569589809315;MAFB:0.563476656861;HES1:0.559067766594;SPZ1:0.536928832446;ZIC1..3:0.507711716918;TEF:0.504440461109;FOXL1:0.481041019102;NR1H4:0.47135520368;HIF1A:0.471349089491;MAZ:0.455397671158;LEF1_TCF7_TCF7L1,2:0.43296440216;EBF1:0.424819104933;POU6F1:0.423202921646;GTF2I:0.419937331356;MEF2{A,B,C,D}:0.412483206664;HLF:0.401252919284;SRF:0.384526976658;NKX2-1,4:0.374322103979;TLX1..3_NFIC{dimer}:0.370858798724;SMAD1..7,9:0.369951128105;ZBTB6:0.357507199056;FOX{D1,D2}:0.348618456051;POU1F1:0.348514040631;RFX1:0.346687994027;EGR1..3:0.311967368141;IKZF1:0.307828291709;MED-1{core}:0.306522314806;T:0.304570574963;HSF1,2:0.275502508329;NFE2L2:0.245837506625;GCM1,2:0.245199189179;TOPORS:0.2403473616;TBX4,5:0.239356357837;XCPE1{core}:0.224228184404;NFIX:0.213309652513;GFI1B:0.204076521529;OCT4_SOX2{dimer}:0.201572414977;NHLH1,2:0.191888952672;ZFP161:0.187854067117;KLF4:0.17252676361;GATA4:0.171742384041;STAT2,4,6:0.168358336145;TFAP4:0.163141252086;MZF1:0.162482868102;SOX17:0.154354892613;FOX{I1,J2}:0.149266171137;ZNF423:0.148714942131;BACH2:0.13932184435;ZNF143:0.138752122175;ZNF238:0.114463456797;MYFfamily:0.108488545002;CDX1,2,4:0.0844013095136;TFAP2{A,C}:0.0655131529111;FOXO1,3,4:0.0591371780557;DMAP1_NCOR{1,2}_SMARC:0.0578499558823;FOXP3:0.0414093016938;PRDM1:0.0290485480331;NANOG{mouse}:0.00802619063816;FOSL2:-0.00982271329937;FOXN1:-0.0111323795004;FOS_FOS{B,L1}_JUN{B,D}:-0.0164136842653;HMX1:-0.0201763177824;NFIL3:-0.0252108329095;HNF1A:-0.0361435816755;NFE2:-0.0483097998083;JUN:-0.049840007271;ELK1,4_GABP{A,B1}:-0.0633741740371;ONECUT1,2:-0.0679127599575;PAX5:-0.071664951352;FOXP1:-0.0844174021711;CDC5L:-0.0858351629704;GZF1:-0.105416946428;STAT5{A,B}:-0.106924584473;MTF1:-0.10810921382;CREB1:-0.114756720366;RUNX1..3:-0.119974404039;RXRA_VDR{dimer}:-0.121856926066;NRF1:-0.162201416321;IRF1,2:-0.188542012156;NR5A1,2:-0.1885767896;BPTF:-0.196491854671;REST:-0.198989114939;E2F1..5:-0.206397532132;TBP:-0.221847552564;TLX2:-0.228540164233;HAND1,2:-0.232931013434;SOX5:-0.23840417322;ALX4:-0.251637777924;FOX{F1,F2,J1}:-0.256747683825;bHLH_family:-0.262641616292;PAX2:-0.276526251506;NKX2-3_NKX2-5:-0.277066115383;PATZ1:-0.278586404231;ATF4:-0.283912811269;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.284739646884;CEBPA,B_DDIT3:-0.297186127856;SOX2:-0.297327128688;AR:-0.303547333416;CUX2:-0.306773825389;FOXM1:-0.307539931417;YY1:-0.309837651231;SREBF1,2:-0.318971303529;IRF7:-0.330448750423;GFI1:-0.355800375579;ETS1,2:-0.386502434156;SP1:-0.387920323425;RFX2..5_RFXANK_RFXAP:-0.388386547602;NANOG:-0.395174523434;NFKB1_REL_RELA:-0.406340774816;LHX3,4:-0.410179495344;ATF2:-0.414252455697;AHR_ARNT_ARNT2:-0.425925958379;PRRX1,2:-0.445745554742;PITX1..3:-0.451356020718;ELF1,2,4:-0.482063495786;PAX6:-0.482979671931;RORA:-0.487016218842;HOXA9_MEIS1:-0.492881807861;CRX:-0.504779147488;NFY{A,B,C}:-0.505283603219;SPI1:-0.538844984218;ARID5B:-0.580450805682;GATA6:-0.599481749037;RREB1:-0.638429858523;ATF5_CREB3:-0.639788818255;SPIB:-0.647090715897;EP300:-0.718560467067;BREu{core}:-0.720222527893;ESRRA:-0.743905425746;SOX{8,9,10}:-0.811836431708;HNF4A_NR2F1,2:-0.898540144934;POU2F1..3:-0.925467912283;FOXQ1:-0.933579537201;HOX{A6,A7,B6,B7}:-0.944664783276;SNAI1..3:-0.96125911223;IKZF2:-1.04902136392;STAT1,3:-1.0805354553;ALX1:-1.09027638195;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.13143071593;RBPJ:-1.16542258146;TGIF1:-1.18074391817;ZEB1:-1.19262970462;LMO2:-1.27663176225;PAX1,9:-1.27775893943;NKX6-1,2:-1.57009323622;PBX1:-1.5842759712;MYOD1:-1.69963601367
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10704-109H2;search_select_hide=table117:FF:10704-109H2
}}
}}

Latest revision as of 14:34, 3 June 2020

Name:osteoclastoma cell line:Hs 706.T
Species:Human (Homo sapiens)
Library ID:CNhs11835
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebone
dev stageNA
sexfemale
age16
cell typeosteoclast
cell lineHs 706.T
companyATCC
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005057
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11835 CAGE DRX007976 DRR008848
Accession ID Hg19

Library idBAMCTSS
CNhs11835 DRZ000273 DRZ001658
Accession ID Hg38

Library idBAMCTSS
CNhs11835 DRZ011623 DRZ013008
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0386
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.152
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.402
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0554
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.141
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.246
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0079
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.058
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.106
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0185
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.155
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.0809
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.246
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.14
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.331
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.517
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.682
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic1.007
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.608
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11835

Jaspar motifP-value
MA0002.20.672
MA0003.10.473
MA0004.10.143
MA0006.10.0302
MA0007.10.467
MA0009.10.193
MA0014.10.345
MA0017.10.17
MA0018.20.0242
MA0019.10.32
MA0024.10.00871
MA0025.10.353
MA0027.10.737
MA0028.10.0393
MA0029.10.0873
MA0030.10.691
MA0031.10.428
MA0035.20.0355
MA0038.10.123
MA0039.20.0267
MA0040.10.392
MA0041.10.437
MA0042.10.592
MA0043.15.19187e-4
MA0046.10.958
MA0047.20.469
MA0048.10.00373
MA0050.10.0622
MA0051.10.0802
MA0052.10.267
MA0055.10.597
MA0057.10.798
MA0058.10.0312
MA0059.10.806
MA0060.19.69806e-4
MA0061.10.143
MA0062.26.98477e-5
MA0065.20.101
MA0066.10.942
MA0067.10.145
MA0068.10.484
MA0069.10.326
MA0070.10.617
MA0071.10.937
MA0072.10.86
MA0073.10.39
MA0074.10.506
MA0076.10.013
MA0077.10.177
MA0078.10.73
MA0079.20.732
MA0080.21.4565e-8
MA0081.10.00463
MA0083.10.1
MA0084.10.112
MA0087.10.867
MA0088.10.237
MA0090.12.19296e-5
MA0091.10.687
MA0092.10.889
MA0093.10.196
MA0099.20.509
MA0100.10.0673
MA0101.10.00486
MA0102.22.20757e-4
MA0103.18.15945e-5
MA0104.20.0111
MA0105.10.0557
MA0106.10.0227
MA0107.10.0191
MA0108.20.00847
MA0111.10.327
MA0112.20.863
MA0113.10.557
MA0114.10.123
MA0115.10.367
MA0116.10.347
MA0117.10.186
MA0119.10.575
MA0122.10.678
MA0124.10.127
MA0125.10.0643
MA0131.10.252
MA0135.10.0428
MA0136.15.15864e-10
MA0137.20.637
MA0138.20.962
MA0139.10.291
MA0140.10.321
MA0141.10.525
MA0142.10.171
MA0143.10.376
MA0144.10.485
MA0145.10.772
MA0146.10.847
MA0147.10.0691
MA0148.10.807
MA0149.10.32
MA0150.10.633
MA0152.10.0401
MA0153.10.579
MA0154.10.422
MA0155.10.386
MA0156.13.67813e-4
MA0157.10.704
MA0159.10.778
MA0160.10.307
MA0162.10.827
MA0163.10.0863
MA0164.10.798
MA0258.10.87
MA0259.10.196



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11835

Novel motifP-value
10.504
100.993
1000.781
1010.712
1020.246
1030.223
1040.285
1050.346
1060.65
1070.497
1080.505
1090.581
110.73
1100.632
1110.468
1120.678
1130.0709
1140.693
1150.667
1160.391
1170.885
1180.374
1190.475
120.369
1200.842
1210.696
1220.409
1230.0851
1240.635
1250.618
1260.724
1270.49
1280.565
1290.354
130.025
1300.56
1310.922
1320.761
1330.799
1340.0615
1350.445
1360.473
1370.405
1380.637
1390.615
140.241
1400.419
1410.485
1420.896
1430.209
1440.449
1450.674
1460.529
1470.0911
1480.355
1490.985
150.397
1500.748
1510.818
1520.0668
1530.987
1540.325
1550.104
1560.474
1570.37
1580.138
1590.182
160.0411
1600.26
1610.95
1620.306
1630.434
1640.731
1650.802
1660.179
1670.822
1680.188
1690.763
170.544
180.0166
190.125
20.531
200.866
210.247
220.407
230.0808
240.342
250.366
260.64
270.586
280.911
290.909
30.783
300.757
310.65
325.25649e-19
330.855
340.988
350.94
360.347
370.406
380.264
390.595
40.66
400.262
410.47
420.518
430.5
440.827
450.751
460.339
470.419
480.968
490.884
50.123
500.615
510.397
520.948
530.104
540.56
550.175
560.924
570.481
580.145
590.0277
60.565
600.994
610.203
620.987
630.552
640.889
650.769
660.565
670.0275
680.383
690.492
70.282
700.156
710.606
720.197
730.0468
740.0144
750.798
760.194
770.111
780.239
790.0514
80.207
800.764
810.693
820.684
830.409
840.447
850.375
860.726
870.396
880.822
890.681
90.88
900.24
910.494
920.746
930.445
940.409
950.599
960.839
970.247
980.321
990.521



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11835


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0000151 (secretory cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000054 (bone matrix secreting cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0002092 (bone marrow cell)
0000137 (osteocyte)
0000092 (osteoclast)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
7 (disease of anatomical entity)
201 (connective tissue cancer)
0060100 (musculoskeletal system cancer)
200 (giant cell tumor)
4305 (bone giant cell tumor)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002371 (bone marrow)
0001474 (bone element)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004765 (skeletal element)
0010317 (germ layer / neural crest derived structure)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0002390 (hematopoietic system)
0002193 (hemolymphoid system)
0002405 (immune system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100583 (bone marrow cancer cell sample)
0100372 (bone cancer cell)
0100969 (osteoclastoma cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0000335 (mesenchyme condensation cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)

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