FF:10047-101G2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023 | |DRA_sample_Accession=CAGE@SAMD00004996 | ||
|accession_numbers=CAGE;DRX008752;DRR009624;DRZ001049;DRZ002434;DRZ012399;DRZ013784 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0002372,UBERON:0006562,UBERON:0000033,UBERON:0000479,UBERON:0001007,UBERON:0000344,UBERON:0004121,UBERON:0000064,UBERON:0004119,UBERON:0011216,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004923,UBERON:0004921,UBERON:0000161,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0001961,UBERON:0001744,UBERON:0010317,UBERON:0001555,UBERON:0001004,UBERON:0002465,UBERON:0000153,UBERON:0007811,UBERON:0000165,UBERON:0000166,UBERON:0001042,UBERON:0002193,UBERON:0002405,UBERON:0001735 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010047 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr4:57547454..57547469,-!p1@HOPX!2.60!399.87!HOPX;;chr11:111249993..111250006,-!p1@POU2AF1!2.37!233.17!POU2AF1;;chr11:34642612..34642646,+!p1@EHF!2.35!223.74!EHF;;chr17:80797886..80797906,-!p1@ZNF750!2.23!169.39!ZNF750;;chr16:85932760..85932775,+!p1@IRF8!2.19!154.44!IRF8;;chr5:134369879..134369898,-!p2@PITX1!2.12!129.38!PITX1;;chr19:50922187..50922204,+!p1@SPIB!2.06!114.23!SPIB;;chr6:391743..391759,+!p1@IRF4!1.98!93.55!IRF4;;chr20:21686317..21686350,+!p1@PAX1!1.94!86.75!PAX1;;chr1:201979743..201979762,+!p1@ELF3!1.89!76.78!ELF3;;chr1:24645832..24645853,+!p1@GRHL3!1.86!71.06!GRHL3;;chr14:37131058..37131139,+!p1@PAX9!1.84!68.43!PAX9;;chr19:19281060..19281078,-!p2@MEF2BNB-MEF2B,p2@MEF2B!1.83!67.28!MEF2B;;chr5:134369905..134369972,-!p1@PITX1!1.79!91.73!PITX1;;chr1:201979703..201979721,+!p2@ELF3!1.73!52.47!ELF3;;chr11:47400078..47400106,-!p1@SPI1!1.73!52.13!SPI1;;chr11:129245526..129245553,+!p1@BARX2!1.70!49.50!BARX2;;chr15:101069113..101069169,-!p1@CERS3!1.68!46.47!CERS3;;chr9:100615499..100615519,+!p1@FOXE1!1.66!44.39!FOXE1;;chr6:34524093..34524135,-!p1@SPDEF!1.65!44.18!SPDEF;;chr3:189507432..189507459,+!p1@TP63!1.65!43.91!TP63;;chr2:100759010..100759035,-!p1@AFF3!1.65!43.78!AFF3;;chr1:24645921..24645973,+!p2@GRHL3!1.64!42.70!GRHL3;;chr2:231090433..231090469,+!p1@SP140!1.62!40.28!SP140;;chr20:21686290..21686311,+!p2@PAX1!1.61!39.94!PAX1;;chr2:68592406..68592424,+!p1@PLEK!1.59!37.92!PLEK;;chr17:7493405..7493419,-!p1@SOX15!1.54!33.61!SOX15;;chr2:231090471..231090504,+!p2@SP140!1.54!33.47!SP140;;chr17:38020392..38020477,-!p1@IKZF3!1.50!30.71!IKZF3;;chr1:209979467..209979494,-!p1@IRF6!1.49!33.27!IRF6;;chr5:133451294..133451310,+!p2@TCF7!1.49!29.77!TCF7;;chr2:100759037..100759058,-!p2@AFF3!1.48!29.03!AFF3;;chr7:50343634..50343717,+!p2@IKZF1!1.47!28.62!IKZF1;;chr11:34642656..34642667,+!p2@EHF!1.47!28.22!EHF;;chr20:50159198..50159299,-!p1@NFATC2!1.46!39.94!NFATC2;;chr1:25291475..25291511,-!p2@RUNX3!1.45!27.48!RUNX3;;chr17:37934365..37934387,-!p2@IKZF3!1.45!27.01!IKZF3;;chr8:10588010..10588030,-!p1@SOX7!1.44!26.81!SOX7;;chrY:21906594..21906622,-!p1@KDM5D!1.43!26.20!KDM5D;;chr13:73633131..73633149,+!p1@KLF5!1.42!260.65!KLF5;;chr11:129245736..129245758,+!p2@BARX2!1.42!25.59!BARX2;;chr1:25256756..25256774,-!p1@RUNX3!1.40!44.59!RUNX3;;chr6:106534192..106534224,+!p1@PRDM1!1.39!64.79!PRDM1;;chr9:117150254..117150271,-!p1@AKNA!1.39!63.18!AKNA;;chr11:65554528..65554546,+!p1@OVOL1!1.39!23.71!OVOL1;;chr17:37934204..37934241,-!p3@IKZF3!1.37!22.23!IKZF3;;chr2:70142232..70142251,+!p1@MXD1!1.36!120.43!MXD1;;chr12:54785074..54785122,-!p2@ZNF385A!1.36!33.14!ZNF385A;;chr17:53342311..53342400,+!p1@HLF!1.34!24.04!HLF;;chr8:23540441..23540466,-!p1@NKX3-1!1.33!40.34!NKX3-1;;chr18:45663490..45663528,-!p2@ZBTB7C!1.32!20.07!ZBTB7C;;chr11:34645791..34645836,+!p3@EHF!1.32!20.00!EHF;;chr3:63953435..63953499,+!p1@ATXN7!1.32!19.73!ATXN7;;chr5:133450365..133450444,+!p1@TCF7!1.31!87.42!TCF7;;chr21:38071430..38071456,+!p1@SIM2!1.31!19.26!SIM2;;chr12:54785054..54785072,-!p4@ZNF385A!1.29!20.81!ZNF385A;;chr6:1312325..1312340,+!p1@FOXQ1!1.28!29.50!FOXQ1;;chr22:29196433..29196445,-!p4@XBP1!1.28!20.07!XBP1;;chr3:181429704..181429722,+!p1@SOX2!1.28!18.19!SOX2;;chr5:88178983..88179012,-!p1@MEF2C!1.27!134.70!MEF2C;;chr20:62680984..62680999,-!p1@SOX18!1.27!23.44!SOX18;;chr7:50348268..50348366,+!p4@IKZF1!1.26!17.24!IKZF1;;chr9:37034186..37034216,-!p2@PAX5!1.26!17.11!PAX5;;chr1:209979411..209979433,-!p2@IRF6!1.26!17.04!IRF6;;chr17:38020557..38020572,-!p4@IKZF3!1.25!16.70!IKZF3;;chr19:42636586..42636607,-!p1@POU2F2!1.24!44.92!POU2F2;;chr2:10091815..10091864,+!p1@GRHL1!1.23!21.08!GRHL1;;chr6:91006518..91006570,-!p1@BACH2!1.20!34.35!BACH2;;chr6:106534230..106534254,+!p2@PRDM1!1.19!35.90!PRDM1;;chr8:60031619..60031676,-!p1@TOX!1.19!31.18!TOX;;chr2:122042770..122042785,-!p1@TFCP2L1!1.19!14.41!TFCP2L1;;chr3:71355163..71355209,-!p5@FOXP1!1.18!19.67!FOXP1;;chr5:88120151..88120177,-!p6@MEF2C!1.18!14.28!MEF2C;;chr20:56195474..56195506,-!p1@ZBP1!1.17!13.67!ZBP1;;chr17:80797863..80797874,-!p2@ZNF750!1.17!13.67!ZNF750;;chr16:79634624..79634642,-!p1@MAF!1.14!50.24!MAF;;chrX:49121165..49121179,-!p1@FOXP3!1.13!12.59!FOXP3;;chr4:109087445..109087463,-!p1@LEF1!1.13!12.46!LEF1;;chr1:170632285..170632309,+!p1@PRRX1!1.12!13.81!PRRX1;;chr12:52437488..52437507,+!p2@NR4A1!1.12!12.19!NR4A1;;chr7:50344251..50344288,+!p3@IKZF1!1.11!11.85!IKZF1;;chr6:10415276..10415341,-!p2@TFAP2A!1.09!14.01!TFAP2A;;chr2:60781201..60781258,-!p3@BCL11A!1.08!10.98!BCL11A;;chr7:50344289..50344323,+!p1@IKZF1!1.07!10.84!IKZF1;;chr18:77155922..77155939,+!p1@NFATC1!1.06!28.69!NFATC1;;chr20:55204351..55204377,+!p1@TFAP2C!1.06!13.34!TFAP2C;;chr14:38064429..38064486,-!p1@FOXA1!1.06!10.44!FOXA1;;chr8:102504651..102504683,+!p1@GRHL2!1.05!10.30!GRHL2;;chr13:41593425..41593480,-!p1@ELF1!1.04!64.79!ELF1;;chr19:13213662..13213686,-!p1@LYL1!1.04!14.82!LYL1;;chr6:91006575..91006602,-!p2@BACH2!1.04!14.75!BACH2;;chr18:52989031..52989079,-!p2@TCF4!1.03!23.03!TCF4;;chr6:106546808..106546833,+!p3@PRDM1!1.03!12.39!PRDM1;;chr7:97840743..97840786,+!p1@BHLHA15!1.03!9.77!BHLHA15;;chr14:75988771..75988826,+!p1@BATF!1.02!12.86!BATF;;chr15:42749722..42749739,-!p2@ZFP106!1.01!16.70!ZFP106;;chr2:192015701..192015743,-!p1@STAT4!1.01!12.93!STAT4;;chr17:38020516..38020544,-!p5@IKZF3!1.01!9.23!IKZF3;;chr5:158526756..158526797,-!p3@EBF1!1.01!9.23!EBF1;;chr2:60780607..60780624,-!p2@BCL11A!1.00!28.02!BCL11A;;chr3:32023232..32023273,+!p1@ZNF860!1.00!12.93!ZNF860;;chr21:39870339..39870443,-!p1@ERG!1.00!9.03!ERG;;chr3:111314186..111314204,-!p1@ZBED2!1.00!8.96!ZBED2;;chr3:18486354..18486377,-!p2@SATB1!0.99!11.11!SATB1;;chr2:60778035..60778060,-!p4@BCL11A!0.99!10.51!BCL11A;;chr12:26277956..26277980,-!p1@BHLHE41!0.98!31.59!BHLHE41;;chr2:70314240..70314256,+!p4@PCBP1!0.98!18.12!PCBP1;;chr6:126240442..126240459,+!p4@NCOA7!0.97!10.84!NCOA7;;chr3:27763807..27763822,-!p1@EOMES!0.97!8.42!EOMES;;chr4:185395633..185395651,-!p2@IRF2!0.96!13.13!IRF2;;chr4:185395590..185395627,-!p3@IRF2!0.96!10.10!IRF2;;chr17:37934188..37934202,-!p8@IKZF3!0.96!8.22!IKZF3;;chr6:126240380..126240430,+!p2@NCOA7!0.95!21.22!NCOA7;;chr12:26277817..26277863,-!p2@BHLHE41!0.95!10.98!BHLHE41;;chr11:65554563..65554576,+!p2@OVOL1!0.95!7.81!OVOL1;;chr5:133451347..133451358,+!p3@TCF7!0.95!7.81!TCF7;;chr11:128392273..128392308,-!p2@ETS1!0.94!34.08!ETS1;;chr7:15726296..15726315,-!p1@MEOX2!0.94!7.68!MEOX2;;chr19:13213704..13213726,-!p3@LYL1!0.93!9.97!LYL1;;chr11:47400062..47400077,-!p2@SPI1!0.93!7.54!SPI1;;chr2:100758991..100759009,-!p3@AFF3!0.93!7.48!AFF3;;chr14:75988831..75988847,+!p2@BATF!0.92!7.41!BATF;;chr15:67458861..67458879,+!p17@SMAD3!0.92!7.41!SMAD3;;chr17:26833339..26833378,+!p1@FOXN1!0.92!7.34!FOXN1;;chr5:71803177..71803255,-!p1@ZNF366!0.92!7.34!ZNF366;;chr9:37034258..37034270,-!p3@PAX5!0.92!7.34!PAX5;;chr19:45908292..45908374,-!p1@PPP1R13L!0.91!65.74!PPP1R13L;;chr19:45252008..45252024,+!p2@BCL3!0.91!24.31!BCL3;;chr16:86544113..86544145,+!p1@FOXF1!0.90!8.82!FOXF1;;chr22:38380543..38380569,-!p1@SOX10!0.90!6.94!SOX10;;chr15:60884706..60884743,-!p1@RORA!0.89!36.77!RORA;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.89!6.80!PEG3;;chr19:19779619..19779670,+!p1@ZNF101!0.88!19.53!ZNF101;;chr22:29196492..29196503,-!p3@XBP1!0.88!10.44!XBP1;;chr1:6479968..6479986,-!p1@HES2!0.88!6.67!HES2;;chr7:50343895..50343936,+!p5@IKZF1!0.88!6.67!IKZF1;;chr20:39317868..39317884,-!p1@MAFB!0.87!80.96!MAFB;;chr6:157098579..157098634,+!p4@ARID1B!0.87!15.15!ARID1B;;chr2:231090344..231090361,-!p3@SP110!0.87!6.47!SP110;;chr3:181429741..181429767,+!p2@SOX2!0.87!6.47!SOX2;;chr2:61108695..61108753,+!p1@REL!0.86!45.19!REL;;chr1:10754477..10754517,-!p1@CASZ1!0.86!10.78!CASZ1;;chr17:37934280..37934299,-!p6@IKZF3!0.86!6.26!IKZF3;;chr14:105935396..105935413,+!p4@MTA1!0.86!6.26!MTA1;;chr12:52445218..52445237,+!p1@NR4A1!0.85!81.56!NR4A1;;chr6:10412600..10412637,-!p1@TFAP2A!0.85!10.57!TFAP2A;;chr8:86099884..86099918,+!p4@E2F5!0.85!6.13!E2F5;;chr10:64018918..64018936,+!p2@ZNF365!0.85!6.13!ZNF365;;chr5:88179017..88179046,-!p2@MEF2C!0.84!25.46!MEF2C;;chr19:36204309..36204335,+!p1@ZBTB32!0.84!5.99!ZBTB32;;chr1:151804244..151804310,-!p1@RORC!0.84!5.99!RORC;;chr17:38020607..38020621,-!p9@IKZF3!0.84!5.93!IKZF3;;chr3:71179699..71179744,-!p2@FOXP1!0.83!46.54!FOXP1;;chr11:46299199..46299233,+!p1@CREB3L1!0.83!31.79!CREB3L1;;chr3:114866084..114866118,-!p2@ZBTB20!0.83!22.09!ZBTB20;;chr17:38256799..38256815,-!p3@NR1D1!0.83!10.91!NR1D1;;chr19:45260775..45260838,+!p5@BCL3!0.83!7.68!BCL3;;chr1:24645865..24645871,+!p6@GRHL3!0.83!5.79!GRHL3;;chr12:53625966..53626012,-!p2@RARG!0.82!15.83!RARG;;chr2:68592394..68592405,+!p2@PLEK!0.82!5.66!PLEK;;chr2:10091922..10091935,+!p3@GRHL1!0.82!5.59!GRHL1;;chr21:36421535..36421610,-!p2@RUNX1!0.81!20.81!RUNX1;;chr17:7492684..7492778,-!p2@SOX15!0.81!11.99!SOX15;;chr2:63277948..63277974,+!p1@OTX1!0.81!5.39!OTX1;;chr9:110252035..110252057,-!p1@KLF4!0.80!92.74!KLF4;;chr8:123793860..123793921,+!p2@ZHX2!0.80!15.63!ZHX2;;chr2:19558373..19558392,-!p1@OSR1!0.80!15.56!OSR1;;chr10:64576105..64576133,-!p1@EGR2!0.80!11.58!EGR2;;chr1:214161272..214161322,+!p1@PROX1!0.80!7.75!PROX1;;chr7:14028488..14028516,-!p2@ETV1!0.80!5.86!ETV1;;chr1:40105299..40105326,-!p1@HEYL!0.80!5.32!HEYL;;chr12:54778471..54778528,-!p1@ZNF385A!0.80!5.25!ZNF385A;;chr19:45579725..45579743,-!p1@ZNF296!0.79!25.32!ZNF296;;chr16:88752889..88752921,-!p1@SNAI3!0.79!6.20!SNAI3;;chr4:109090075..109090095,-!p2@LEF1!0.79!5.12!LEF1;;chr4:57522513..57522548,-!p4@HOPX!0.79!5.12!HOPX;;chr16:79634595..79634620,-!p2@MAF!0.78!9.63!MAF;;chr4:174451370..174451387,-!p1@HAND2!0.78!5.05!HAND2;;chr9:37027156..37027193,-!p4@PAX5!0.78!4.98!PAX5;;chr19:19729477..19729542,-!p1@PBX4!0.77!11.11!PBX4;;chr6:144385698..144385742,-!p2@PLAGL1!0.77!6.13!PLAGL1;;chrX:106960285..106960299,-!p1@TSC22D3!0.76!139.96!TSC22D3;;chr5:2751762..2751784,-!p1@IRX2!0.76!4.78!IRX2;;chr9:117160738..117160782,-!p2@AKNA!0.75!20.81!AKNA;;chr11:47279504..47279563,+!p1@NR1H3!0.75!11.38!NR1H3;;chr9:37034469..37034474,-!p1@PAX5!0.75!4.65!PAX5;;chr21:38071403..38071428,+!p2@SIM2!0.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| 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DM1!1.03!12.39!PRDM1;;chr7:97840743..97840786,+!p1@BHLHA15!1.03!9.77!BHLHA15;;chr14:75988771..75988826,+!p1@BATF!1.02!12.86!BATF;;chr15:42749722..42749739,-!p2@ZFP106!1.01!16.70!ZFP106;;chr2:192015701..192015743,-!p1@STAT4!1.01!12.93!STAT4;;chr17:38020516..38020544,-!p5@IKZF3!1.01!9.23!IKZF3;;chr5:158526756..158526797,-!p3@EBF1!1.01!9.23!EBF1;;chr2:60780607..60780624,-!p2@BCL11A!1.00!28.02!BCL11A;;chr3:32023232..32023273,+!p1@ZNF860!1.00!12.93!ZNF860;;chr21:39870339..39870443,-!p1@ERG!1.00!9.03!ERG;;chr3:111314186..111314204,-!p1@ZBED2!1.00!8.96!ZBED2;;chr3:18486354..18486377,-!p2@SATB1!0.99!11.11!SATB1;;chr2:60778035..60778060,-!p4@BCL11A!0.99!10.51!BCL11A;;chr12:26277956..26277980,-!p1@BHLHE41!0.98!31.59!BHLHE41;;chr2:70314240..70314256,+!p4@PCBP1!0.98!18.12!PCBP1;;chr6:126240442..126240459,+!p4@NCOA7!0.97!10.84!NCOA7;;chr3:27763807..27763822,-!p1@EOMES!0.97!8.42!EOMES;;chr4:185395633..185395651,-!p2@IRF2!0.96!13.13!IRF2;;chr4:185395590..185395627,-!p3@IRF2!0.96!10.10!IRF2;;chr17:37934188..37934202,-!p8@IKZF3!0.96!8.22!IKZF3;;chr6:126240380..126240430,+!p2@NCOA7!0.95!21.22!NCOA7;;chr12:26277817..26277863,-!p2@BHLHE41!0.95!10.98!BHLHE41;;chr11:65554563..65554576,+!p2@OVOL1!0.95!7.81!OVOL1;;chr5:133451347..133451358,+!p3@TCF7!0.95!7.81!TCF7;;chr11:128392273..128392308,-!p2@ETS1!0.94!34.08!ETS1;;chr7:15726296..15726315,-!p1@MEOX2!0.94!7.68!MEOX2;;chr19:13213704..13213726,-!p3@LYL1!0.93!9.97!LYL1;;chr11:47400062..47400077,-!p2@SPI1!0.93!7.54!SPI1;;chr2:100758991..100759009,-!p3@AFF3!0.93!7.48!AFF3;;chr14:75988831..75988847,+!p2@BATF!0.92!7.41!BATF;;chr15:67458861..67458879,+!p17@SMAD3!0.92!7.41!SMAD3;;chr17:26833339..26833378,+!p1@FOXN1!0.92!7.34!FOXN1;;chr5:71803177..71803255,-!p1@ZNF366!0.92!7.34!ZNF366;;chr9:37034258..37034270,-!p3@PAX5!0.92!7.34!PAX5;;chr19:45908292..45908374,-!p1@PPP1R13L!0.91!65.74!PPP1R13L;;chr19:45252008..45252024,+!p2@BCL3!0.91!24.31!BCL3;;chr16:86544113..86544145,+!p1@FOXF1!0.90!8.82!FOXF1;;chr22:38380543..38380569,-!p1@SOX10!0.90!6.94!SOX10;;chr15:60884706..60884743,-!p1@RORA!0.89!36.77!RORA;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!0.89!6.80!PEG3;;chr19:19779619..19779670,+!p1@ZNF101!0.88!19.53!ZNF101;;chr22:29196492..29196503,-!p3@XBP1!0.88!10.44!XBP1;;chr1:6479968..6479986,-!p1@HES2!0.88!6.67!HES2;;chr7:50343895..50343936,+!p5@IKZF1!0.88!6.67!IKZF1;;chr20:39317868..39317884,-!p1@MAFB!0.87!80.96!MAFB;;chr6:157098579..157098634,+!p4@ARID1B!0.87!15.15!ARID1B;;chr2:231090344..231090361,-!p3@SP110!0.87!6.47!SP110;;chr3:181429741..181429767,+!p2@SOX2!0.87!6.47!SOX2;;chr2:61108695..61108753,+!p1@REL!0.86!45.19!REL;;chr1:10754477..10754517,-!p1@CASZ1!0.86!10.78!CASZ1;;chr17:37934280..37934299,-!p6@IKZF3!0.86!6.26!IKZF3;;chr14:105935396..105935413,+!p4@MTA1!0.86!6.26!MTA1;;chr12:52445218..52445237,+!p1@NR4A1!0.85!81.56!NR4A1;;chr6:10412600..10412637,-!p1@TFAP2A!0.85!10.57!TFAP2A;;chr8:86099884..86099918,+!p4@E2F5!0.85!6.13!E2F5;;chr10:64018918..64018936,+!p2@ZNF365!0.85!6.13!ZNF365;;chr5:88179017..88179046,-!p2@MEF2C!0.84!25.46!MEF2C;;chr19:36204309..36204335,+!p1@ZBTB32!0.84!5.99!ZBTB32;;chr1:151804244..151804310,-!p1@RORC!0.84!5.99!RORC;;chr17:38020607..38020621,-!p9@IKZF3!0.84!5.93!IKZF3;;chr3:71179699..71179744,-!p2@FOXP1!0.83!46.54!FOXP1;;chr11:46299199..46299233,+!p1@CREB3L1!0.83!31.79!CREB3L1;;chr3:114866084..114866118,-!p2@ZBTB20!0.83!22.09!ZBTB20;;chr17:38256799..38256815,-!p3@NR1D1!0.83!10.91!NR1D1;;chr19:45260775..45260838,+!p5@BCL3!0.83!7.68!BCL3;;chr1:24645865..24645871,+!p6@GRHL3!0.83!5.79!GRHL3;;chr12:53625966..53626012,-!p2@RARG!0.82!15.83!RARG;;chr2:68592394..68592405,+!p2@PLEK!0.82!5.66!PLEK;;chr2:10091922..10091935,+!p3@GRHL1!0.82!5.59!GRHL1;;chr21:36421535..36421610,-!p2@RUNX1!0.81!20.81!RUNX1;;chr17:7492684..7492778,-!p2@SOX15!0.81!11.99!SOX15;;chr2:63277948..63277974,+!p1@OTX1!0.81!5.39!OTX1;;chr9:110252035..110252057,-!p1@KLF4!0.80!92.74!KLF4;;chr8:123793860..123793921,+!p2@ZHX2!0.80!15.63!ZHX2;;chr2:19558373..19558392,-!p1@OSR1!0.80!15.56!OSR1;;chr10:64576105..64576133,-!p1@EGR2!0.80!11.58!EGR2;;chr1:214161272..214161322,+!p1@PROX1!0.80!7.75!PROX1;;chr7:14028488..14028516,-!p2@ETV1!0.80!5.86!ETV1;;chr1:40105299..40105326,-!p1@HEYL!0.80!5.32!HEYL;;chr12:54778471..54778528,-!p1@ZNF385A!0.80!5.25!ZNF385A;;chr19:45579725..45579743,-!p1@ZNF296!0.79!25.32!ZNF296;;chr16:88752889..88752921,-!p1@SNAI3!0.79!6.20!SNAI3;;chr4:109090075..109090095,-!p2@LEF1!0.79!5.12!LEF1;;chr4:57522513..57522548,-!p4@HOPX!0.79!5.12!HOPX;;chr16:79634595..79634620,-!p2@MAF!0.78!9.63!MAF;;chr4:174451370..174451387,-!p1@HAND2!0.78!5.05!HAND2;;chr9:37027156..37027193,-!p4@PAX5!0.78!4.98!PAX5;;chr19:19729477..19729542,-!p1@PBX4!0.77!11.11!PBX4;;chr6:144385698..144385742,-!p2@PLAGL1!0.77!6.13!PLAGL1;;chrX:106960285..106960299,-!p1@TSC22D3!0.76!139.96!TSC22D3;;chr5:2751762..2751784,-!p1@IRX2!0.76!4.78!IRX2;;chr9:117160738..117160782,-!p2@AKNA!0.75!20.81!AKNA;;chr11:47279504..47279563,+!p1@NR1H3!0.75!11.38!NR1H3;;chr9:37034469..37034474,-!p1@PAX5!0.75!4.65!PAX5;;chr21:38071403..38071428,+!p2@SIM2!0.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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000161;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000165;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000166;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000344;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001557;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002465 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0006595,UBERON:0010316 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/tonsil%252c%2520adult%252c%2520pool1.CNhs10654.10047-101G2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/tonsil%252c%2520adult%252c%2520pool1.CNhs10654.10047-101G2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/tonsil%252c%2520adult%252c%2520pool1.CNhs10654.10047-101G2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/tonsil%252c%2520adult%252c%2520pool1.CNhs10654.10047-101G2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/tonsil%252c%2520adult%252c%2520pool1.CNhs10654.10047-101G2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10047-101G2 | |id=FF:10047-101G2 | ||
|is_a=EFO:0002091;;FF:0010047 | |is_a=EFO:0002091;;FF:0010047 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs10654 | |||
|library_id_phase_based=2:CNhs10654 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10047 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10047 | |||
|name=tonsil, adult, pool1 | |name=tonsil, adult, pool1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 43: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10654,LSID658,release008,COMPLETED | |profile_hcage=CNhs10654,LSID658,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:636587 | |rna_catalog_number=Cat:636587 | ||
| Line 58: | Line 79: | ||
|rna_weight_ug=50 | |rna_weight_ug=50 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 79: | Line 101: | ||
|top_motifs=TBP:3.25904758314;POU2F1..3:3.15661160874;POU5F1:3.02764869432;TFCP2:2.40557584753;SNAI1..3:2.31166130602;ZEB1:2.2223605852;MYOD1:1.76368113507;LMO2:1.76026503044;TLX2:1.73989147259;MEF2{A,B,C,D}:1.6783608122;SP1:1.66779489656;ZNF148:1.55830813459;IRF7:1.55774722686;ETS1,2:1.51161667186;ELF1,2,4:1.48969265143;RBPJ:1.36576048065;XCPE1{core}:1.36537120521;TBX4,5:1.35181490573;FOX{F1,F2,J1}:1.30097732422;VSX1,2:1.24063448481;EP300:1.18634386011;TFAP4:1.16859923136;TGIF1:1.10298637225;SOX5:1.08111433529;FOXO1,3,4:1.01677800204;SPI1:0.984094762917;MAZ:0.965111049713;IRF1,2:0.964330620424;HMX1:0.963065999204;T:0.95487529113;NANOG:0.936450436904;RUNX1..3:0.924254884836;ZNF423:0.917888818408;FOXA2:0.909483696152;TFAP2{A,C}:0.901436728646;FOX{D1,D2}:0.897821532045;SPIB:0.822359955175;PAX6:0.819398010391;NKX2-3_NKX2-5:0.778504511719;RXRA_VDR{dimer}:0.768869537336;RREB1:0.759658294494;SPZ1:0.750214128182;MYFfamily:0.692703635526;SRF:0.661622496665;NFATC1..3:0.656108320637;TP53:0.653845028787;HAND1,2:0.652792979443;PATZ1:0.647604366091;ESR1:0.63204407007;MTF1:0.591672713233;PBX1:0.582772506972;FOXN1:0.556375539694;SMAD1..7,9:0.551259474046;MED-1{core}:0.509964604644;GLI1..3:0.432509710817;NFY{A,B,C}:0.428207173415;TAL1_TCF{3,4,12}:0.423192121232;DMAP1_NCOR{1,2}_SMARC:0.405307437536;ATF2:0.399361934451;NKX2-1,4:0.38102370452;ATF6:0.377863382528;EGR1..3:0.355758085393;ZNF238:0.354755639206;JUN:0.354578916405;PAX3,7:0.341934285861;TLX1..3_NFIC{dimer}:0.328296429485;SREBF1,2:0.315661160128;PDX1:0.31248004044;BPTF:0.307212096513;GTF2I:0.29730817014;GCM1,2:0.29283928021;NFKB1_REL_RELA:0.272839035842;EBF1:0.257759116413;SOX2:0.255996586088;GTF2A1,2:0.248192813028;SOX{8,9,10}:0.242825305778;GATA6:0.227765533967;HIC1:0.222887369256;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.210557814304;NHLH1,2:0.202053879635;NKX6-1,2:0.191655310407;NR5A1,2:0.188807544652;BREu{core}:0.178583233376;AR:0.16616261883;CRX:0.156681975087;CDC5L:0.14742160229;NKX3-2:0.0912891360545;ZFP161:0.0896745410784;MTE{core}:0.0868166758079;CUX2:0.0782637120638;MZF1:0.0132274882417;STAT1,3:-0.000931883244136;GFI1:-0.0134037276277;TEAD1:-0.0360953469008;LEF1_TCF7_TCF7L1,2:-0.0472631147951;FOS_FOS{B,L1}_JUN{B,D}:-0.0508783087069;RORA:-0.0651104335119;PITX1..3:-0.071409863106;E2F1..5:-0.0789639187634;STAT2,4,6:-0.0834888355918;DBP:-0.088537882293;ZNF143:-0.103330868264;ALX4:-0.11051232341;MYBL2:-0.111193702367;TFAP2B:-0.128492030643;MAFB:-0.135670137093;PRDM1:-0.153665186873;TOPORS:-0.187073293368;NR1H4:-0.198324893677;OCT4_SOX2{dimer}:-0.2441356764;PAX5:-0.245936320186;FOSL2:-0.265522547279;HBP1_HMGB_SSRP1_UBTF:-0.26724391641;REST:-0.274369463415;AIRE:-0.287582002557;GATA4:-0.288570481809;HNF4A_NR2F1,2:-0.301079675524;RFX2..5_RFXANK_RFXAP:-0.301741162136;ELK1,4_GABP{A,B1}:-0.310612447954;HES1:-0.312815319348;NFIL3:-0.317954519604;ZIC1..3:-0.323553808645;ZNF384:-0.323591211253;CEBPA,B_DDIT3:-0.332083969276;bHLH_family:-0.352296810091;HSF1,2:-0.360369939387;HIF1A:-0.380003511407;FOXP1:-0.381053690518;NRF1:-0.415139399978;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.416750809087;ATF4:-0.421168185261;ADNP_IRX_SIX_ZHX:-0.424766171723;FOX{I1,J2}:-0.434197012325;NFIX:-0.444169869931;PAX2:-0.45205149892;POU6F1:-0.479380285975;IKZF1:-0.487983887279;GFI1B:-0.500373552421;FOXL1:-0.505103868147;HNF1A:-0.509609636853;NFE2:-0.533225648676;BACH2:-0.547842793036;ATF5_CREB3:-0.554796781906;NANOG{mouse}:-0.564778789838;FOXQ1:-0.575622561394;MYB:-0.62272082476;PRRX1,2:-0.633651662912;TFDP1:-0.639162456864;IKZF2:-0.652905430502;POU1F1:-0.664600558916;FOXM1:-0.672037457584;HLF:-0.674055307512;CREB1:-0.691418356374;XBP1:-0.707273362887;HOX{A4,D4}:-0.772080572217;HOX{A6,A7,B6,B7}:-0.772410814517;KLF4:-0.813825412898;LHX3,4:-0.833708084943;NFE2L2:-0.846138130078;ESRRA:-0.879572128668;NFE2L1:-0.890034376591;ZBTB6:-0.91505815991;PAX1,9:-0.916321309188;SOX17:-0.944393023166;FOXP3:-0.947959517911;YY1:-0.956484527884;AHR_ARNT_ARNT2:-0.968574072847;GZF1:-0.987363660795;NR6A1:-1.0153365996;CDX1,2,4:-1.05541611097;RXR{A,B,G}:-1.07787008344;STAT5{A,B}:-1.08808560207;RFX1:-1.14118445605;NR3C1:-1.19983761507;POU3F1..4:-1.25712135847;PPARG:-1.25806262253;HOXA9_MEIS1:-1.32300468673;EN1,2:-1.42895426893;ARID5B:-1.46695334411;NKX3-1:-1.49867723952;ALX1:-1.51655056738;HOX{A5,B5}:-1.52677984198;UFEwm:-1.56658044966;ZBTB16:-1.57488056846;ONECUT1,2:-1.57697140625;NKX2-2,8:-1.59066022876;EVI1:-1.72273358353;FOXD3:-1.92337115335;TEF:-2.07726665989;PAX8:-2.07926762392;HMGA1,2:-2.13187491054;PAX4:-2.24493340177 | |top_motifs=TBP:3.25904758314;POU2F1..3:3.15661160874;POU5F1:3.02764869432;TFCP2:2.40557584753;SNAI1..3:2.31166130602;ZEB1:2.2223605852;MYOD1:1.76368113507;LMO2:1.76026503044;TLX2:1.73989147259;MEF2{A,B,C,D}:1.6783608122;SP1:1.66779489656;ZNF148:1.55830813459;IRF7:1.55774722686;ETS1,2:1.51161667186;ELF1,2,4:1.48969265143;RBPJ:1.36576048065;XCPE1{core}:1.36537120521;TBX4,5:1.35181490573;FOX{F1,F2,J1}:1.30097732422;VSX1,2:1.24063448481;EP300:1.18634386011;TFAP4:1.16859923136;TGIF1:1.10298637225;SOX5:1.08111433529;FOXO1,3,4:1.01677800204;SPI1:0.984094762917;MAZ:0.965111049713;IRF1,2:0.964330620424;HMX1:0.963065999204;T:0.95487529113;NANOG:0.936450436904;RUNX1..3:0.924254884836;ZNF423:0.917888818408;FOXA2:0.909483696152;TFAP2{A,C}:0.901436728646;FOX{D1,D2}:0.897821532045;SPIB:0.822359955175;PAX6:0.819398010391;NKX2-3_NKX2-5:0.778504511719;RXRA_VDR{dimer}:0.768869537336;RREB1:0.759658294494;SPZ1:0.750214128182;MYFfamily:0.692703635526;SRF:0.661622496665;NFATC1..3:0.656108320637;TP53:0.653845028787;HAND1,2:0.652792979443;PATZ1:0.647604366091;ESR1:0.63204407007;MTF1:0.591672713233;PBX1:0.582772506972;FOXN1:0.556375539694;SMAD1..7,9:0.551259474046;MED-1{core}:0.509964604644;GLI1..3:0.432509710817;NFY{A,B,C}:0.428207173415;TAL1_TCF{3,4,12}:0.423192121232;DMAP1_NCOR{1,2}_SMARC:0.405307437536;ATF2:0.399361934451;NKX2-1,4:0.38102370452;ATF6:0.377863382528;EGR1..3:0.355758085393;ZNF238:0.354755639206;JUN:0.354578916405;PAX3,7:0.341934285861;TLX1..3_NFIC{dimer}:0.328296429485;SREBF1,2:0.315661160128;PDX1:0.31248004044;BPTF:0.307212096513;GTF2I:0.29730817014;GCM1,2:0.29283928021;NFKB1_REL_RELA:0.272839035842;EBF1:0.257759116413;SOX2:0.255996586088;GTF2A1,2:0.248192813028;SOX{8,9,10}:0.242825305778;GATA6:0.227765533967;HIC1:0.222887369256;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.210557814304;NHLH1,2:0.202053879635;NKX6-1,2:0.191655310407;NR5A1,2:0.188807544652;BREu{core}:0.178583233376;AR:0.16616261883;CRX:0.156681975087;CDC5L:0.14742160229;NKX3-2:0.0912891360545;ZFP161:0.0896745410784;MTE{core}:0.0868166758079;CUX2:0.0782637120638;MZF1:0.0132274882417;STAT1,3:-0.000931883244136;GFI1:-0.0134037276277;TEAD1:-0.0360953469008;LEF1_TCF7_TCF7L1,2:-0.0472631147951;FOS_FOS{B,L1}_JUN{B,D}:-0.0508783087069;RORA:-0.0651104335119;PITX1..3:-0.071409863106;E2F1..5:-0.0789639187634;STAT2,4,6:-0.0834888355918;DBP:-0.088537882293;ZNF143:-0.103330868264;ALX4:-0.11051232341;MYBL2:-0.111193702367;TFAP2B:-0.128492030643;MAFB:-0.135670137093;PRDM1:-0.153665186873;TOPORS:-0.187073293368;NR1H4:-0.198324893677;OCT4_SOX2{dimer}:-0.2441356764;PAX5:-0.245936320186;FOSL2:-0.265522547279;HBP1_HMGB_SSRP1_UBTF:-0.26724391641;REST:-0.274369463415;AIRE:-0.287582002557;GATA4:-0.288570481809;HNF4A_NR2F1,2:-0.301079675524;RFX2..5_RFXANK_RFXAP:-0.301741162136;ELK1,4_GABP{A,B1}:-0.310612447954;HES1:-0.312815319348;NFIL3:-0.317954519604;ZIC1..3:-0.323553808645;ZNF384:-0.323591211253;CEBPA,B_DDIT3:-0.332083969276;bHLH_family:-0.352296810091;HSF1,2:-0.360369939387;HIF1A:-0.380003511407;FOXP1:-0.381053690518;NRF1:-0.415139399978;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.416750809087;ATF4:-0.421168185261;ADNP_IRX_SIX_ZHX:-0.424766171723;FOX{I1,J2}:-0.434197012325;NFIX:-0.444169869931;PAX2:-0.45205149892;POU6F1:-0.479380285975;IKZF1:-0.487983887279;GFI1B:-0.500373552421;FOXL1:-0.505103868147;HNF1A:-0.509609636853;NFE2:-0.533225648676;BACH2:-0.547842793036;ATF5_CREB3:-0.554796781906;NANOG{mouse}:-0.564778789838;FOXQ1:-0.575622561394;MYB:-0.62272082476;PRRX1,2:-0.633651662912;TFDP1:-0.639162456864;IKZF2:-0.652905430502;POU1F1:-0.664600558916;FOXM1:-0.672037457584;HLF:-0.674055307512;CREB1:-0.691418356374;XBP1:-0.707273362887;HOX{A4,D4}:-0.772080572217;HOX{A6,A7,B6,B7}:-0.772410814517;KLF4:-0.813825412898;LHX3,4:-0.833708084943;NFE2L2:-0.846138130078;ESRRA:-0.879572128668;NFE2L1:-0.890034376591;ZBTB6:-0.91505815991;PAX1,9:-0.916321309188;SOX17:-0.944393023166;FOXP3:-0.947959517911;YY1:-0.956484527884;AHR_ARNT_ARNT2:-0.968574072847;GZF1:-0.987363660795;NR6A1:-1.0153365996;CDX1,2,4:-1.05541611097;RXR{A,B,G}:-1.07787008344;STAT5{A,B}:-1.08808560207;RFX1:-1.14118445605;NR3C1:-1.19983761507;POU3F1..4:-1.25712135847;PPARG:-1.25806262253;HOXA9_MEIS1:-1.32300468673;EN1,2:-1.42895426893;ARID5B:-1.46695334411;NKX3-1:-1.49867723952;ALX1:-1.51655056738;HOX{A5,B5}:-1.52677984198;UFEwm:-1.56658044966;ZBTB16:-1.57488056846;ONECUT1,2:-1.57697140625;NKX2-2,8:-1.59066022876;EVI1:-1.72273358353;FOXD3:-1.92337115335;TEF:-2.07726665989;PAX8:-2.07926762392;HMGA1,2:-2.13187491054;PAX4:-2.24493340177 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10047-101G2;search_select_hide=table117:FF:10047-101G2 | |||
}} | }} | ||
Latest revision as of 12:17, 3 June 2020
| Name: | tonsil, adult, pool1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10654 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10654
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10654
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.497 |
| 10 | 10 | 0.0428 |
| 100 | 100 | 0.0947 |
| 101 | 101 | 0.913 |
| 102 | 102 | 0.634 |
| 103 | 103 | 0.649 |
| 104 | 104 | 0.698 |
| 105 | 105 | 0.0909 |
| 106 | 106 | 0.365 |
| 107 | 107 | 0.161 |
| 108 | 108 | 0.811 |
| 109 | 109 | 0.972 |
| 11 | 11 | 0.841 |
| 110 | 110 | 0.617 |
| 111 | 111 | 0.333 |
| 112 | 112 | 0.201 |
| 113 | 113 | 0.0548 |
| 114 | 114 | 0.156 |
| 115 | 115 | 0.596 |
| 116 | 116 | 0.0973 |
| 117 | 117 | 0.339 |
| 118 | 118 | 0.0338 |
| 119 | 119 | 0.724 |
| 12 | 12 | 0.595 |
| 120 | 120 | 0.17 |
| 121 | 121 | 0.0595 |
| 122 | 122 | 0.177 |
| 123 | 123 | 0.368 |
| 124 | 124 | 0.515 |
| 125 | 125 | 0.907 |
| 126 | 126 | 0.146 |
| 127 | 127 | 0.257 |
| 128 | 128 | 0.612 |
| 129 | 129 | 0.861 |
| 13 | 13 | 0.272 |
| 130 | 130 | 0.375 |
| 131 | 131 | 0.587 |
| 132 | 132 | 0.261 |
| 133 | 133 | 4.73588e-4 |
| 134 | 134 | 0.00157 |
| 135 | 135 | 0.0246 |
| 136 | 136 | 0.964 |
| 137 | 137 | 0.249 |
| 138 | 138 | 0.968 |
| 139 | 139 | 0.551 |
| 14 | 14 | 0.425 |
| 140 | 140 | 0.561 |
| 141 | 141 | 0.324 |
| 142 | 142 | 0.596 |
| 143 | 143 | 0.947 |
| 144 | 144 | 0.0518 |
| 145 | 145 | 0.415 |
| 146 | 146 | 0.0133 |
| 147 | 147 | 0.826 |
| 148 | 148 | 0.841 |
| 149 | 149 | 0.0871 |
| 15 | 15 | 0.236 |
| 150 | 150 | 0.89 |
| 151 | 151 | 0.507 |
| 152 | 152 | 0.109 |
| 153 | 153 | 0.324 |
| 154 | 154 | 0.56 |
| 155 | 155 | 0.618 |
| 156 | 156 | 0.916 |
| 157 | 157 | 0.204 |
| 158 | 158 | 0.969 |
| 159 | 159 | 0.615 |
| 16 | 16 | 0.833 |
| 160 | 160 | 0.673 |
| 161 | 161 | 0.88 |
| 162 | 162 | 0.698 |
| 163 | 163 | 0.447 |
| 164 | 164 | 0.0243 |
| 165 | 165 | 0.697 |
| 166 | 166 | 0.914 |
| 167 | 167 | 0.0446 |
| 168 | 168 | 2.72809e-4 |
| 169 | 169 | 0.168 |
| 17 | 17 | 0.719 |
| 18 | 18 | 0.108 |
| 19 | 19 | 0.675 |
| 2 | 2 | 0.028 |
| 20 | 20 | 0.12 |
| 21 | 21 | 0.726 |
| 22 | 22 | 0.327 |
| 23 | 23 | 0.452 |
| 24 | 24 | 0.781 |
| 25 | 25 | 0.477 |
| 26 | 26 | 0.717 |
| 27 | 27 | 0.144 |
| 28 | 28 | 0.843 |
| 29 | 29 | 0.232 |
| 3 | 3 | 0.872 |
| 30 | 30 | 0.0207 |
| 31 | 31 | 0.947 |
| 32 | 32 | 0.0747 |
| 33 | 33 | 0.689 |
| 34 | 34 | 0.322 |
| 35 | 35 | 0.23 |
| 36 | 36 | 0.0989 |
| 37 | 37 | 0.625 |
| 38 | 38 | 0.579 |
| 39 | 39 | 0.911 |
| 4 | 4 | 0.958 |
| 40 | 40 | 0.878 |
| 41 | 41 | 0.754 |
| 42 | 42 | 0.933 |
| 43 | 43 | 0.968 |
| 44 | 44 | 0.903 |
| 45 | 45 | 0.0178 |
| 46 | 46 | 0.795 |
| 47 | 47 | 0.75 |
| 48 | 48 | 0.944 |
| 49 | 49 | 0.826 |
| 5 | 5 | 0.811 |
| 50 | 50 | 0.345 |
| 51 | 51 | 0.966 |
| 52 | 52 | 0.238 |
| 53 | 53 | 0.286 |
| 54 | 54 | 0.849 |
| 55 | 55 | 0.639 |
| 56 | 56 | 0.76 |
| 57 | 57 | 0.294 |
| 58 | 58 | 0.483 |
| 59 | 59 | 0.336 |
| 6 | 6 | 0.309 |
| 60 | 60 | 0.303 |
| 61 | 61 | 0.707 |
| 62 | 62 | 0.837 |
| 63 | 63 | 0.487 |
| 64 | 64 | 0.955 |
| 65 | 65 | 0.526 |
| 66 | 66 | 0.528 |
| 67 | 67 | 0.47 |
| 68 | 68 | 0.724 |
| 69 | 69 | 0.901 |
| 7 | 7 | 0.522 |
| 70 | 70 | 0.239 |
| 71 | 71 | 0.273 |
| 72 | 72 | 0.0609 |
| 73 | 73 | 0.762 |
| 74 | 74 | 0.105 |
| 75 | 75 | 0.342 |
| 76 | 76 | 0.0628 |
| 77 | 77 | 0.226 |
| 78 | 78 | 0.617 |
| 79 | 79 | 0.145 |
| 8 | 8 | 0.604 |
| 80 | 80 | 7.56823e-5 |
| 81 | 81 | 0.771 |
| 82 | 82 | 0.9 |
| 83 | 83 | 0.728 |
| 84 | 84 | 0.111 |
| 85 | 85 | 0.945 |
| 86 | 86 | 0.788 |
| 87 | 87 | 0.56 |
| 88 | 88 | 0.812 |
| 89 | 89 | 0.666 |
| 9 | 9 | 0.173 |
| 90 | 90 | 0.0755 |
| 91 | 91 | 0.412 |
| 92 | 92 | 0.47 |
| 93 | 93 | 0.999 |
| 94 | 94 | 0.341 |
| 95 | 95 | 0.802 |
| 96 | 96 | 0.909 |
| 97 | 97 | 0.54 |
| 98 | 98 | 0.31 |
| 99 | 99 | 0.382 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10654
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010047 human tonsil - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0002372 (tonsil)
0006562 (pharynx)
0000033 (head)
0000479 (tissue)
0001007 (digestive system)
0000344 (mucosa)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0004119 (endoderm-derived structure)
0011216 (organ system subdivision)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004923 (organ component layer)
0004921 (subdivision of digestive tract)
0000161 (orifice)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0001961 (mucosa-associated lymphoid tissue)
0001744 (lymphoid tissue)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001004 (respiratory system)
0002465 (lymphoid system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000165 (mouth)
0000166 (oral opening)
0001042 (chordate pharynx)
0002193 (hemolymphoid system)
0002405 (immune system)
0001735 (tonsillar ring)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010047 (human tonsil - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)
