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{{f5samples
{{f5samples
|id=FF:10389-105I2
|DRA_sample_Accession=macaque_CAGE@SAMD00066885
|name=substantia nigra, adult, donor8633
|accession_numbers=macaque_CAGE;DRX071012;DRR077168;DRZ007691;DRZ007706
|sample_id=10389
|ancestors_in_anatomy_facet=
|rna_tube_id=105I2
|rna_box=105
|rna_position=I2
|sample_cell_lot=
|sample_cell_catalog=
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Macaque (Macaca mulatta)
|sample_strain=
|sample_dev_stage=
|sample_tissue=substantia nigra
|sample_donor(cell lot)=donor:8633
|sample_sex=female
|sample_age=23
|sample_ethnicity=
|rna_rin=6.9
|rna_od260/230=
|rna_od260/280=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=Peter Heutink
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=
|rna_concentration=0.63
|sample_note=
|profile_hcage=CNhs14173,LSID1177,release017,COMPLETED
|profile_cagescan=
|profile_srnaseq=
|profile_rnaseq=
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|comment=
|created_by=
|creation_date=
|def=
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
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|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|id=FF:10389-105I2
|is_a=
|library_id=CNhs14173
|name=substantia nigra, adult, donor8633
|namespace=
|part_of=
|profile_cagescan=
|profile_hcage=CNhs14173,LSID1177,release017,COMPLETED
|profile_rnaseq=
|profile_srnaseq=
|rna_box=105
|rna_catalog_number=
|rna_concentration=0.63
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=
|rna_od260/280=
|rna_position=I2
|rna_rin=6.9
|rna_sample_type=total RNA
|rna_tube_id=105I2
|rna_weight_ug=
|sample_age=23
|sample_category=tissues
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_lot=
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=Peter Heutink
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=donor:8633
|sample_ethnicity=
|sample_experimental_condition=
|sample_id=10389
|sample_note=
|sample_sex=female
|sample_species=Rhesus macaque
|sample_strain=
|sample_tissue=substantia nigra
|top_motifs=
|top_motifs=
|zenbu_config=http://fantom.gsc.riken.jp/zenbu/gLyphs/#config=Rqah2bi7NNhsVSMs_ZhetB
}}
}}

Latest revision as of 11:26, 18 May 2017


Name:substantia nigra, adult, donor8633
Species:Rhesus macaque
Library ID:CNhs14173
Sample type:tissues
Additional information
Sample information
strainNA
tissuesubstantia nigra
dev stageNA
sexfemale
age23
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyNA
collaborationPeter Heutink
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
macaque_CAGE  SAMD00066885
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs14173 macaque_CAGE DRX071012 DRR077168
Accession ID

Library idBAMCTSS
CNhs14173 DRZ007691 DRZ007706



FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

FF: FANTOM5
NA

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA