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FFCP PHASE1:Mm9::chrX:7367112..7367130,+: Difference between revisions

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{{FFCP|EntrezGene=54645|HGNC=|UniProt=A2AEW6,A2AEW8,A2AEW5,Q8VD04|association_with_transcript=0bp_to_ENSMUST00000115671,ENSMUST00000115675,ENSMUST00000136930,ENSMUST00000171917,NM_207670,uc009smm.1,uc009smn.1,uc009smo.1,uc012hel.1_5end|description=CAGE_peak_1_at_Gripap1_5end|id=chrX:7367112..7367130,+|ontology_enrichment_celltype=CL:0000117!1.90e-10!23;CL:0000337!1.90e-10!23;CL:0000540!7.77e-08!33;CL:0000047!7.77e-08!33;CL:0000031!7.77e-08!33;CL:0000404!7.77e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-10,23;CL:0000337,1.89e-10,23;CL:0000540,8.07e-08,33;CL:0000047,8.07e-08,33;CL:0000031,8.07e-08,33;CL:0000404,8.07e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.32e-09!52;UBERON:0005068!4.32e-09!52;UBERON:0006241!4.32e-09!52;UBERON:0007135!4.32e-09!52;UBERON:0002020!1.63e-08!34;UBERON:0000073!1.71e-08!75;UBERON:0001016!1.71e-08!75;UBERON:0000955!3.91e-08!50;UBERON:0006238!3.91e-08!50;UBERON:0001017!4.23e-08!73;UBERON:0005743!4.23e-08!73;UBERON:0002616!1.19e-07!49;UBERON:0003080!9.11e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.94e-09,54;UBERON:0001049,4.03e-09,52;UBERON:0005068,4.03e-09,52;UBERON:0006241,4.03e-09,52;UBERON:0007135,4.03e-09,52;UBERON:0002020,1.63e-08,34;UBERON:0001016,1.64e-08,75;UBERON:0001017,4.06e-08,73;UBERON:0002346,1.34e-07,64;UBERON:0003075,1.34e-07,64;UBERON:0007284,1.34e-07,64;UBERON:0000955,1.45e-07,47;UBERON:0006238,1.45e-07,47;UBERON:0002616,4.32e-07,46;UBERON:0010371,6.28e-07,73;UBERON:0004121,7.90e-07,95;UBERON:0000924,7.90e-07,95;UBERON:0006601,7.90e-07,95;UBERON:0003080,9.09e-07,40|phase1_expression=2.7225304007815,4.53668029931169,5.45999087267443,9.67885476181856,6.51164448930251,3.18970616632591,1.40167584357315,5.29405626110463,5.490760163915,4.21316147379588,4.96532107853964,2.39316476986009,7.53283211697305,4.80812213304486,4.99664642723494,4.45445588257617,9.79386629379405,8.67520954735154,9.87223921961319,5.94145512517242,5.52781385981954,1.98581902401771,3.6567970479451,4.63978026100879,2.2940928106717,4.59385571292016,3.01533397311352,4.52489588640367,2.66032787238923,2.52030129759931,0.443461021310609,2.54012269383853,4.30545351309199,0,1.44425809875637,1.82858109894342,2.04169356262369,3.76678467663217,6.2506827561904,9.94695113550217,13.5293242247133,9.56263678941824,13.1087795318411,0.377690453926732,1.01376931219515,1.46837401729345,0,2.8343270329458,1.5378032791413,2.3331587888914,2.37976916763116,0,13.5903910906766,5.07753499407941,7.73015738027667,1.54355661621568,2.0057340795713,2.06268836910977,6.27181028664753,3.1739458756322,6.97214543856797,0.677689064138264,0.889294796111139,0.449949858640699,3.9554654502679,2.8419204597844,0.898800331555214,1.92109152660777,6.84351441235953,4.45519596494579,5.04779907243317,5.71301968807607,4.63823935998388,5.02212276781312,8.81778333367775,5.51531271966013,2.20231761998777,8.81042632787795,8.44835932909339,6.19865552331911,8.41686321142169,7.8137005583514,7.53794097303729,7.31591393041184,9.16789486660861,3.83017161115768,10.5355043791336,5.96478226640962,3.25622631332691,5.13886608726142,2.89864488701678,5.16254326188832,1.3599426674155,3.2382191498269,3.24888208723835,1.34408066129201,3.65155492342555,1.87473354835864,2.59786004602869,4.24007489412408,1.69012103732017,1.28326477414318,2.54805239706646,0,1.73192832808971,1.26679932737549,1.01104889002957,3.31133251185274,14.5005214842416,3.85949561568544,2.94925055502431,0.608930956624282,1.38369298353635,1.65794904607885,1.88141931417128,3.89566433121994,1.73036477414062,3.7595832799177,1.76922110389975,2.26473589926373,4.63767188766826,4.84875253135222,0,7.02673912827713,5.65506108396329,3.83185582812887,1.31796636956512,1.79970819298022,0.762421362438388,4.34392854273986,5.94750783664214,5.27748278874031,4.17178368461463,6.64860189058859,4.98691306942944,5.353961681236,2.64782346010822,3.35898820647251,3.53811861807145,2.73574412652416,1.69156575851515,3.21862946206862,2.16074555766419,2.71268672104287,2.72145996605311,2.8185018462667,2.90475346135159,2.84573707812917,1.5089759505299,1.51284864134255,2.63926686245923,1.7535658594206,1.39023624612799,3.48252166522167,2.26360350048738,1.19420560091096,0.702213187313235,1.02939162845886,2.27330799516474,2.69263504296152,2.11073453982987,1.62055855314913,1.65721314909647,2.36117078096885,1.69693824176116,2.55787339225449,2.68273401399619,3.15266424391358,3.62031669809657,2.79084688934462,2.75633952455909,3.21639972335731,1.53685080703735,1.8788898626452,3.99550902271842,4.21908910755066,7.26921322564356,3.17340679996253,1.70630600428187,3.0190767341857,2.44848176511977,4.03367049246685,2.00140239460383,2.28270751335071,1.89811624617805,0.988193728344065,1.25667604400135,1.98956472041151,1.9496408711912,6.29173586057955,4.53889904736858,4.77939055810481,1.70701110857774,1.71372768914593,4.50830942692322,2.64746726198909,2.90928730751439,1.82353131714828,2.46622494784603,3.39503340353085,3.1399745568275,1.72756029490521,3.260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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54645
|HGNC=
|TSSclassifier=NA
|UniProt=A2AEW6,A2AEW8,A2AEW5,Q8VD04
|association_with_transcript=0bp_to_ENSMUST00000115671,ENSMUST00000115675,ENSMUST00000136930,ENSMUST00000171917,NM_207670,uc009smm.1,uc009smn.1,uc009smo.1,uc012hel.1_5end
|cluster_id=chrX:7367112..7367130,+
|description=CAGE_peak_1_at_Gripap1_5end
|id=chrX:7367112..7367130,+
|ontology_enrichment_celltype=CL:0000117!1.90e-10!23;CL:0000337!1.90e-10!23;CL:0000540!7.77e-08!33;CL:0000047!7.77e-08!33;CL:0000031!7.77e-08!33;CL:0000404!7.77e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-10,23;CL:0000337,1.89e-10,23;CL:0000540,8.07e-08,33;CL:0000047,8.07e-08,33;CL:0000031,8.07e-08,33;CL:0000404,8.07e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.32e-09!52;UBERON:0005068!4.32e-09!52;UBERON:0006241!4.32e-09!52;UBERON:0007135!4.32e-09!52;UBERON:0002020!1.63e-08!34;UBERON:0000073!1.71e-08!75;UBERON:0001016!1.71e-08!75;UBERON:0000955!3.91e-08!50;UBERON:0006238!3.91e-08!50;UBERON:0001017!4.23e-08!73;UBERON:0005743!4.23e-08!73;UBERON:0002616!1.19e-07!49;UBERON:0003080!9.11e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.94e-09,54;UBERON:0001049,4.03e-09,52;UBERON:0005068,4.03e-09,52;UBERON:0006241,4.03e-09,52;UBERON:0007135,4.03e-09,52;UBERON:0002020,1.63e-08,34;UBERON:0001016,1.64e-08,75;UBERON:0001017,4.06e-08,73;UBERON:0002346,1.34e-07,64;UBERON:0003075,1.34e-07,64;UBERON:0007284,1.34e-07,64;UBERON:0000955,1.45e-07,47;UBERON:0006238,1.45e-07,47;UBERON:0002616,4.32e-07,46;UBERON:0010371,6.28e-07,73;UBERON:0004121,7.90e-07,95;UBERON:0000924,7.90e-07,95;UBERON:0006601,7.90e-07,95;UBERON:0003080,9.09e-07,40
|phase1_expression=2.7225304007815,4.53668029931169,5.45999087267443,9.67885476181856,6.51164448930251,3.18970616632591,1.40167584357315,5.29405626110463,5.490760163915,4.21316147379588,4.96532107853964,2.39316476986009,7.53283211697305,4.80812213304486,4.99664642723494,4.45445588257617,9.79386629379405,8.67520954735154,9.87223921961319,5.94145512517242,5.52781385981954,1.98581902401771,3.6567970479451,4.63978026100879,2.2940928106717,4.59385571292016,3.01533397311352,4.52489588640367,2.66032787238923,2.52030129759931,0.443461021310609,2.54012269383853,4.30545351309199,0,1.44425809875637,1.82858109894342,2.04169356262369,3.76678467663217,6.2506827561904,9.94695113550217,13.5293242247133,9.56263678941824,13.1087795318411,0.377690453926732,1.01376931219515,1.46837401729345,0,2.8343270329458,1.5378032791413,2.3331587888914,2.37976916763116,0,13.5903910906766,5.07753499407941,7.73015738027667,1.54355661621568,2.0057340795713,2.06268836910977,6.27181028664753,3.1739458756322,6.97214543856797,0.677689064138264,0.889294796111139,0.449949858640699,3.9554654502679,2.8419204597844,0.898800331555214,1.92109152660777,6.84351441235953,4.45519596494579,5.04779907243317,5.71301968807607,4.63823935998388,5.02212276781312,8.81778333367775,5.51531271966013,2.20231761998777,8.81042632787795,8.44835932909339,6.19865552331911,8.41686321142169,7.8137005583514,7.53794097303729,7.31591393041184,9.16789486660861,3.83017161115768,10.5355043791336,5.96478226640962,3.25622631332691,5.13886608726142,2.89864488701678,5.16254326188832,1.3599426674155,3.2382191498269,3.24888208723835,1.34408066129201,3.65155492342555,1.87473354835864,2.59786004602869,4.24007489412408,1.69012103732017,1.28326477414318,2.54805239706646,0,1.73192832808971,1.26679932737549,1.01104889002957,3.31133251185274,14.5005214842416,3.85949561568544,2.94925055502431,0.608930956624282,1.38369298353635,1.65794904607885,1.88141931417128,3.89566433121994,1.73036477414062,3.7595832799177,1.76922110389975,2.26473589926373,4.63767188766826,4.84875253135222,0,7.02673912827713,5.65506108396329,3.83185582812887,1.31796636956512,1.79970819298022,0.762421362438388,4.34392854273986,5.94750783664214,5.27748278874031,4.17178368461463,6.64860189058859,4.98691306942944,5.353961681236,2.64782346010822,3.35898820647251,3.53811861807145,2.73574412652416,1.69156575851515,3.21862946206862,2.16074555766419,2.71268672104287,2.72145996605311,2.8185018462667,2.90475346135159,2.84573707812917,1.5089759505299,1.51284864134255,2.63926686245923,1.7535658594206,1.39023624612799,3.48252166522167,2.26360350048738,1.19420560091096,0.702213187313235,1.02939162845886,2.27330799516474,2.69263504296152,2.11073453982987,1.62055855314913,1.65721314909647,2.36117078096885,1.69693824176116,2.55787339225449,2.68273401399619,3.15266424391358,3.62031669809657,2.79084688934462,2.75633952455909,3.21639972335731,1.53685080703735,1.8788898626452,3.99550902271842,4.21908910755066,7.26921322564356,3.17340679996253,1.70630600428187,3.0190767341857,2.44848176511977,4.03367049246685,2.00140239460383,2.28270751335071,1.89811624617805,0.988193728344065,1.25667604400135,1.98956472041151,1.9496408711912,6.29173586057955,4.53889904736858,4.77939055810481,1.70701110857774,1.71372768914593,4.50830942692322,2.64746726198909,2.90928730751439,1.82353131714828,2.46622494784603,3.39503340353085,3.1399745568275,1.72756029490521,3.26097889795864,5.5058884886311,4.32429789249047,4.27238013531222,4.66578279193557,4.58236603529592,2.29163266603278,3.74004978686054,3.40483976227574,3.56929837144506,2.87536413054709,1.86070473834252,0.936113019343682,1.51547326768267,2.87035861635059,1.4473305640901,3.32555742299888,2.08440552947533,2.11854469374634,1.86719594352707,1.87752198630802,2.51259386162724,3.33261097240419,1.36593553500459,1.10344600874334,1.32878813789265,4.9430978283821,2.45794972073607,4.83517949224508,1.44649058581512,10.5553898757491,8.70249094109935,1.96705709207614,3.86311444826625,3.05046120976805,5.04010252346474,1.14754461763673,2.52470927204373,3.47059041357882,1.56175497718655,3.87762115919038,2.38968797952552,4.01037613348309,5.09537755419898,0.809621403349789,3.21481443702443,1.97643888973262,9.63963949265421,3.54850213020672,1.06839362200353,2.28041743095006,3.29940245945071,5.30980553359851,1.94224508923985,3.02323556964751,1.32023555829129,3.2483208216885,1.84461088766356,2.06742634534577,2.90826983582004,0.356497378384721,3.47640433729398,3.16255825724996,4.12542172992747,5.44703369206061,1.44048875225048,1.81102157295856,2.7863814554107,4.07882537377229,1.78368817602071,3.9491764944509,4.26250928760439,2.11204537257339,1.0591603543191,2.64634077665954,5.27636009412736,1.77610869365496,3.79971427047382,2.50681922406587,3.11867709515616,3.78925087618806,4.82105785227325,5.12612642393558,2.68302928352189,2.59272338317596,3.20226376907975,5.33107488111998,5.71945433016307,1.69978429993855,2.37917468950219,2.62579950228405,1.90934123603023,2.37251995185852,3.25311147402958,2.59212817972323,1.46361807210128,1.09181281873089,1.07891477107857,2.56225712748541,2.87931536182433,2.46268449254406,2.4853572523477,2.81846469342095,1.94371509857172,0.992750942742586,2.52786544847262,2.19571699912143,2.36538575687089,1.64300134104056,2.47388331203505,1.25831213310853,0.724752362478018,2.59227005632079,1.58005560314089,1.82452693761148,2.46506297195585,2.5984164595559,4.47566739168704,3.57626438606277,2.16351809135944,3.54454865218985,3.93769154797776,3.20068587950999,3.02478555410522,4.28814675254911,4.81059208201647,4.9088298916259,3.40095575422817,3.10780334723691,2.78112955489375,2.3503846290971,2.70465431645067,2.43987218086537,2.38097111547445,2.14368379079066,3.00943262421218,4.51801474093653,2.76195141904306,5.72895513439397,3.95262319390481,2.74033007908257,3.0215755895588,5.40018000185445,2.70192721934532,4.07828168085784,1.03552062350364,1.3492355185943,3.59122386060928,2.21953687480374,3.16038732188782,1.67690530102386,2.38996560985018,2.22246727801615,2.67845574410562,0.64183841918363,1.26348605881899,3.8021894983536,1.88626341386076,2.80924522409647,2.75308155340938,3.96304735793732,3.33405583898152,3.24476112645595,2.12200142510076,2.88460130562315,3.53277408322554,1.37147700954166,2.8396128985494,1.43061713968393,1.88950341622027,1.41164070622996,2.03075058940024,2.37806364734604,2.10455769150274,3.12349461845482,2.24456908663095,2.96587545310435,3.74317033027141,2.86461730218783,3.09873682371932,2.70069255373598,2.74791635731741,0.935726433781634,2.57845264857958,1.91288332068843,2.64709702943419,2.31867835620421
|short_description=p1@Gripap1
}}

Latest revision as of 00:32, 2 October 2015

Short description:p1@Gripap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gripap1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000115671, ENSMUST00000115675, ENSMUST00000136930, ENSMUST00000171917, NM_207670, uc009smm.1, uc009smn.1, uc009smo.1, uc012hel.1_5end
EntrezGene:Gripap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gripap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.97
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.53
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.81
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.87
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.95
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G913.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.59
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F95.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H914.50
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H13.76
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.36
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G12.76
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G71.82
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F85.51
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E14.27
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F54.58
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C74.84
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I73.55
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C35.28
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H33.80
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G25.13
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G35.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C14.48
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D33.20
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A24.29
thymus, neonate N25.CNhs11125.1362-25G74.81
thymus, neonate N30.CNhs11132.1393-42G24.91
tongue, adult.CNhs10499.32-1B43.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.78
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.89e-1023
neuroblast (sensu Vertebrata)1.89e-1023
neuron8.07e-0833
neuronal stem cell8.07e-0833
neuroblast8.07e-0833
electrically signaling cell8.07e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.94e-0954
neural tube4.03e-0952
neural rod4.03e-0952
future spinal cord4.03e-0952
neural keel4.03e-0952
gray matter1.63e-0834
nervous system1.64e-0875
central nervous system4.06e-0873
neurectoderm1.34e-0764
neural plate1.34e-0764
presumptive neural plate1.34e-0764
brain1.45e-0747
future brain1.45e-0747
regional part of brain4.32e-0746
ecto-epithelium6.28e-0773
ectoderm-derived structure7.90e-0795
ectoderm7.90e-0795
presumptive ectoderm7.90e-0795
anterior neural tube9.09e-0740
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