FFCP PHASE1:Mm9::chrX:7221265..7221279,+: Difference between revisions
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{{FFCP|EntrezGene=20977|HGNC=|MCL_coexpression_id=138|UniProt=|association_with_transcript=230bp_to_ENSMUST00000134355_5end|description=CAGE_peak_2_at_Syp_5end|id=chrX:7221265..7221279,+|ontology_enrichment_celltype=CL:0000540!8.28e-25!33;CL:0000047!8.28e-25!33;CL:0000031!8.28e-25!33;CL:0000404!8.28e-25!33;CL:0000117!3.00e-23!23;CL:0000337!3.00e-23!23;CL:0000221!1.50e-22!44;CL:0000133!1.50e-22!44;CL:0002319!6.97e-22!43;CL:0000393!2.20e-19!39;CL:0000211!2.20e-19!39;CL:0000055!3.09e-17!50;CL:0002321!4.50e-10!70;CL:0000220!4.50e-10!70|ontology_enrichment_celltype_v019_2=CL:0000117,1.74e-25,23;CL:0000337,1.74e-25,23;CL:0000540,1.04e-20,33;CL:0000047,1.04e-20,33;CL:0000031,1.04e-20,33;CL:0000404,1.04e-20,33;CL:0000393,8.10e-17,39;CL:0000211,8.10e-17,39;CL:0002319,7.87e-15,43;CL:0000221,2.17e-14,44;CL:0000133,2.17e-14,44;CL:0002610,3.10e-08,3;CL:0002614,3.10e-08,3;CL:0002321,2.02e-07,70;CL:0002612,2.70e-07,3;CL:0002613,6.97e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.05e-47!73;UBERON:0005743!1.05e-47!73;UBERON:0000073!6.69e-46!75;UBERON:0001016!6.69e-46!75;UBERON:0004121!4.04e-42!102;UBERON:0000924!4.04e-42!102;UBERON:0006601!4.04e-42!102;UBERON:0002346!6.89e-37!71;UBERON:0003075!6.89e-37!71;UBERON:0007284!6.89e-37!71;UBERON:0001049!5.43e-35!52;UBERON:0005068!5.43e-35!52;UBERON:0006241!5.43e-35!52;UBERON:0007135!5.43e-35!52;UBERON:0000033!1.07e-33!63;UBERON:0000955!4.39e-33!50;UBERON:0006238!4.39e-33!50;UBERON:0002616!5.34e-32!49;UBERON:0002020!1.36e-30!34;UBERON:0003056!2.83e-27!49;UBERON:0002791!3.95e-25!29;UBERON:0003528!3.95e-25!29;UBERON:0001893!3.95e-25!29;UBERON:0003080!4.64e-25!40;UBERON:0002780!4.43e-24!39;UBERON:0001890!4.43e-24!39;UBERON:0006240!4.43e-24!39;UBERON:0007811!2.65e-20!86;UBERON:0000153!3.12e-17!94;UBERON:0000956!4.20e-17!21;UBERON:0001869!4.20e-17!21;UBERON:0000203!4.20e-17!21;UBERON:0002619!4.91e-14!17;UBERON:0002021!3.21e-13!10;UBERON:0000411!3.21e-13!10;UBERON:0001950!3.21e-13!10;UBERON:0003076!4.38e-10!12;UBERON:0003057!4.38e-10!12;UBERON:0002420!3.66e-09!8;UBERON:0007245!3.66e-09!8;UBERON:0010009!3.66e-09!8;UBERON:0010011!3.66e-09!8;UBERON:0000454!3.66e-09!8;UBERON:0000025!9.02e-09!114;UBERON:0004111!6.51e-08!122;UBERON:0002240!1.59e-07!6;UBERON:0005174!1.59e-07!6;UBERON:0001137!1.59e-07!6;UBERON:0002298!2.23e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-41,73;UBERON:0000073,4.14e-41,54;UBERON:0001016,2.66e-40,75;UBERON:0001049,7.87e-37,52;UBERON:0005068,7.87e-37,52;UBERON:0006241,7.87e-37,52;UBERON:0007135,7.87e-37,52;UBERON:0002020,2.16e-35,34;UBERON:0004121,3.35e-30,95;UBERON:0000924,3.35e-30,95;UBERON:0006601,3.35e-30,95;UBERON:0002346,1.33e-28,64;UBERON:0003075,1.33e-28,64;UBERON:0007284,1.33e-28,64;UBERON:0000955,5.32e-28,47;UBERON:0006238,5.32e-28,47;UBERON:0002616,2.38e-26,46;UBERON:0003528,6.41e-26,29;UBERON:0002791,6.41e-26,29;UBERON:0001893,6.41e-26,29;UBERON:0002021,2.21e-24,10;UBERON:0000411,2.21e-24,10;UBERON:0001950,2.21e-24,10;UBERON:0010371,3.32e-24,73;UBERON:0003080,6.80e-24,40;UBERON:0002780,2.42e-22,39;UBERON:0001890,2.42e-22,39;UBERON:0006240,2.42e-22,39;UBERON:0003056,1.66e-18,49;UBERON:0010314,9.60e-18,92;UBERON:0000956,3.56e-17,21;UBERON:0001869,3.56e-17,21;UBERON:0000203,3.56e-17,21;UBERON:0002619,5.86e-16,17;UBERON:0003076,2.00e-13,12;UBERON:0003057,2.00e-13,12;UBERON:0002240,3.12e-13,6;UBERON:0005174,3.12e-13,6;UBERON:0001137,3.12e-13,6;UBERON:0000025,5.92e-13,114;UBERON:0004111,1.22e-11,122;UBERON:0001948,2.22e-11,5;UBERON:0002315,2.22e-11,5;UBERON:0011216,9.31e-11,194;UBERON:0002950,5.26e-10,4;UBERON:0001891,5.26e-10,4;UBERON:0009616,5.26e-10,4;UBERON:0010286,5.26e-10,4;UBERON:0002420,6.28e-10,8;UBERON:0007245,6.28e-10,8;UBERON:0010009,6.28e-10,8;UBERON:0010011,6.28e-10,8;UBERON:0000454,6.28e-10,8;UBERON:0002038,3.10e-08,3;UBERON:0009663,3.10e-08,3;UBERON:0009661,3.10e-08,3;UBERON:0000125,3.10e-08,3;UBERON:0002308,3.10e-08,3;UBERON:0004684,3.10e-08,3;UBERON:0002275,3.10e-08,3;UBERON:0002257,2.70e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,5.28990979272033,0.633831403506179,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0.622137673850866,2.56511282830212,0.210324961351382,7.42692559449889,8.83474163806454,0.734944795289724,0.670918297127655,0.919218786610021,16.5173821499083,8.68273898979276,12.9029487935245,1.05509030184155,4.29991924931325,2.08365348222704,17.588528937087,9.00420176050688,9.16789486660861,8.54422897873636,8.11518580554887,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,2.72280718857492,0.255457055208591,0,0,0,2.09706895166752,0.915001205637253,0.879580464790051,1.91206752211504,1.02286182932132,3.94797284663164,1.94689515681309,0,0,0,0,0.130120442962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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20977 | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=230bp_to_ENSMUST00000134355_5end | |||
|cluster_id=chrX:7221265..7221279,+ | |||
|description=CAGE_peak_2_at_Syp_5end | |||
|id=chrX:7221265..7221279,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.28e-25!33;CL:0000047!8.28e-25!33;CL:0000031!8.28e-25!33;CL:0000404!8.28e-25!33;CL:0000117!3.00e-23!23;CL:0000337!3.00e-23!23;CL:0000221!1.50e-22!44;CL:0000133!1.50e-22!44;CL:0002319!6.97e-22!43;CL:0000393!2.20e-19!39;CL:0000211!2.20e-19!39;CL:0000055!3.09e-17!50;CL:0002321!4.50e-10!70;CL:0000220!4.50e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.74e-25,23;CL:0000337,1.74e-25,23;CL:0000540,1.04e-20,33;CL:0000047,1.04e-20,33;CL:0000031,1.04e-20,33;CL:0000404,1.04e-20,33;CL:0000393,8.10e-17,39;CL:0000211,8.10e-17,39;CL:0002319,7.87e-15,43;CL:0000221,2.17e-14,44;CL:0000133,2.17e-14,44;CL:0002610,3.10e-08,3;CL:0002614,3.10e-08,3;CL:0002321,2.02e-07,70;CL:0002612,2.70e-07,3;CL:0002613,6.97e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.05e-47!73;UBERON:0005743!1.05e-47!73;UBERON:0000073!6.69e-46!75;UBERON:0001016!6.69e-46!75;UBERON:0004121!4.04e-42!102;UBERON:0000924!4.04e-42!102;UBERON:0006601!4.04e-42!102;UBERON:0002346!6.89e-37!71;UBERON:0003075!6.89e-37!71;UBERON:0007284!6.89e-37!71;UBERON:0001049!5.43e-35!52;UBERON:0005068!5.43e-35!52;UBERON:0006241!5.43e-35!52;UBERON:0007135!5.43e-35!52;UBERON:0000033!1.07e-33!63;UBERON:0000955!4.39e-33!50;UBERON:0006238!4.39e-33!50;UBERON:0002616!5.34e-32!49;UBERON:0002020!1.36e-30!34;UBERON:0003056!2.83e-27!49;UBERON:0002791!3.95e-25!29;UBERON:0003528!3.95e-25!29;UBERON:0001893!3.95e-25!29;UBERON:0003080!4.64e-25!40;UBERON:0002780!4.43e-24!39;UBERON:0001890!4.43e-24!39;UBERON:0006240!4.43e-24!39;UBERON:0007811!2.65e-20!86;UBERON:0000153!3.12e-17!94;UBERON:0000956!4.20e-17!21;UBERON:0001869!4.20e-17!21;UBERON:0000203!4.20e-17!21;UBERON:0002619!4.91e-14!17;UBERON:0002021!3.21e-13!10;UBERON:0000411!3.21e-13!10;UBERON:0001950!3.21e-13!10;UBERON:0003076!4.38e-10!12;UBERON:0003057!4.38e-10!12;UBERON:0002420!3.66e-09!8;UBERON:0007245!3.66e-09!8;UBERON:0010009!3.66e-09!8;UBERON:0010011!3.66e-09!8;UBERON:0000454!3.66e-09!8;UBERON:0000025!9.02e-09!114;UBERON:0004111!6.51e-08!122;UBERON:0002240!1.59e-07!6;UBERON:0005174!1.59e-07!6;UBERON:0001137!1.59e-07!6;UBERON:0002298!2.23e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.30e-41,73;UBERON:0000073,4.14e-41,54;UBERON:0001016,2.66e-40,75;UBERON:0001049,7.87e-37,52;UBERON:0005068,7.87e-37,52;UBERON:0006241,7.87e-37,52;UBERON:0007135,7.87e-37,52;UBERON:0002020,2.16e-35,34;UBERON:0004121,3.35e-30,95;UBERON:0000924,3.35e-30,95;UBERON:0006601,3.35e-30,95;UBERON:0002346,1.33e-28,64;UBERON:0003075,1.33e-28,64;UBERON:0007284,1.33e-28,64;UBERON:0000955,5.32e-28,47;UBERON:0006238,5.32e-28,47;UBERON:0002616,2.38e-26,46;UBERON:0003528,6.41e-26,29;UBERON:0002791,6.41e-26,29;UBERON:0001893,6.41e-26,29;UBERON:0002021,2.21e-24,10;UBERON:0000411,2.21e-24,10;UBERON:0001950,2.21e-24,10;UBERON:0010371,3.32e-24,73;UBERON:0003080,6.80e-24,40;UBERON:0002780,2.42e-22,39;UBERON:0001890,2.42e-22,39;UBERON:0006240,2.42e-22,39;UBERON:0003056,1.66e-18,49;UBERON:0010314,9.60e-18,92;UBERON:0000956,3.56e-17,21;UBERON:0001869,3.56e-17,21;UBERON:0000203,3.56e-17,21;UBERON:0002619,5.86e-16,17;UBERON:0003076,2.00e-13,12;UBERON:0003057,2.00e-13,12;UBERON:0002240,3.12e-13,6;UBERON:0005174,3.12e-13,6;UBERON:0001137,3.12e-13,6;UBERON:0000025,5.92e-13,114;UBERON:0004111,1.22e-11,122;UBERON:0001948,2.22e-11,5;UBERON:0002315,2.22e-11,5;UBERON:0011216,9.31e-11,194;UBERON:0002950,5.26e-10,4;UBERON:0001891,5.26e-10,4;UBERON:0009616,5.26e-10,4;UBERON:0010286,5.26e-10,4;UBERON:0002420,6.28e-10,8;UBERON:0007245,6.28e-10,8;UBERON:0010009,6.28e-10,8;UBERON:0010011,6.28e-10,8;UBERON:0000454,6.28e-10,8;UBERON:0002038,3.10e-08,3;UBERON:0009663,3.10e-08,3;UBERON:0009661,3.10e-08,3;UBERON:0000125,3.10e-08,3;UBERON:0002308,3.10e-08,3;UBERON:0004684,3.10e-08,3;UBERON:0002275,3.10e-08,3;UBERON:0002257,2.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,5.28990979272033,0.633831403506179,0,0,0,0.988866362566974,0,0.299600110518405,0.768436610643109,0.622137673850866,2.56511282830212,0.210324961351382,7.42692559449889,8.83474163806454,0.734944795289724,0.670918297127655,0.919218786610021,16.5173821499083,8.68273898979276,12.9029487935245,1.05509030184155,4.29991924931325,2.08365348222704,17.588528937087,9.00420176050688,9.16789486660861,8.54422897873636,8.11518580554887,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,2.72280718857492,0.255457055208591,0,0,0,2.09706895166752,0.915001205637253,0.879580464790051,1.91206752211504,1.02286182932132,3.94797284663164,1.94689515681309,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,1.76605648986571,0.586058432961016,0,0,0,0.780877488593277,0.215423397732799,0.238968797952552,0,0.283076530788832,1.61924280669958,1.16902343164525,0.790575555893047,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356737635204141,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.471277639256,19.3336599333014,13.7494923225455,12.0297227640581,19.8673930733486,15.8632718451837,16.8755625057951,21.1650965515384,9.9691329976525,10.8729665467882,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0,0.192075457214608,0.114870937911227,0,0.231768651889711,0,0.824171801606613,0,0,0,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p2@Syp | |||
}} |
Latest revision as of 00:26, 2 October 2015
Short description: | p2@Syp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Syp_5end |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | 230bp_to_ENSMUST00000134355_5end |
EntrezGene: | Syp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.74e-25 | 23 |
neuroblast (sensu Vertebrata) | 1.74e-25 | 23 |
neuron | 1.04e-20 | 33 |
neuronal stem cell | 1.04e-20 | 33 |
neuroblast | 1.04e-20 | 33 |
electrically signaling cell | 1.04e-20 | 33 |
electrically responsive cell | 8.10e-17 | 39 |
electrically active cell | 8.10e-17 | 39 |
neural cell | 7.87e-15 | 43 |
ectodermal cell | 2.17e-14 | 44 |
neurectodermal cell | 2.17e-14 | 44 |
raphe nuclei neuron | 3.10e-08 | 3 |
neuron of the substantia nigra | 3.10e-08 | 3 |
embryonic cell | 2.02e-07 | 70 |
neuron of the ventral spinal cord | 2.70e-07 | 3 |
striatum neuron | 6.97e-07 | 3 |