FFCP PHASE1:Mm9::chrX:71542459..71542517,+: Difference between revisions
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{{FFCP|EntrezGene=54411|HGNC=|MCL_coexpression_id=2709|UniProt=Q3TKX1,B7FAU7,B7FAU3|association_with_transcript=0bp_to_ENSMUST00000114171,ENSMUST00000135914,ENSMUST00000147275,ENSMUST00000147900_5end|description=CAGE_peak_1_at_Atp6ap1_5end|id=chrX:71542459..71542517,+|ontology_enrichment_celltype=CL:0000055!9.08e-07!50|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.09e-14!102;UBERON:0000924!9.09e-14!102;UBERON:0006601!9.09e-14!102;UBERON:0000073!1.50e-13!75;UBERON:0001016!1.50e-13!75;UBERON:0001017!1.14e-12!73;UBERON:0005743!1.14e-12!73;UBERON:0007023!2.01e-10!51;UBERON:0001049!6.00e-10!52;UBERON:0005068!6.00e-10!52;UBERON:0006241!6.00e-10!52;UBERON:0007135!6.00e-10!52;UBERON:0000955!6.38e-10!50;UBERON:0006238!6.38e-10!50;UBERON:0002616!1.58e-09!49;UBERON:0000033!4.44e-09!63;UBERON:0004111!9.93e-09!122;UBERON:0002346!9.99e-09!71;UBERON:0003075!9.99e-09!71;UBERON:0007284!9.99e-09!71;UBERON:0002204!1.42e-08!32;UBERON:0000480!5.15e-07!308;UBERON:0000467!5.15e-07!308;UBERON:0000025!5.45e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.50e-13,75;UBERON:0004121,4.26e-13,95;UBERON:0000924,4.26e-13,95;UBERON:0006601,4.26e-13,95;UBERON:0001017,1.14e-12,73;UBERON:0000073,6.94e-11,54;UBERON:0007023,2.01e-10,51;UBERON:0001049,6.00e-10,52;UBERON:0005068,6.00e-10,52;UBERON:0006241,6.00e-10,52;UBERON:0007135,6.00e-10,52;UBERON:0010371,9.03e-09,73;UBERON:0004111,9.93e-09,122;UBERON:0002204,1.42e-08,32;UBERON:0000955,1.65e-08,47;UBERON:0006238,1.65e-08,47;UBERON:0002346,3.29e-08,64;UBERON:0003075,3.29e-08,64;UBERON:0007284,3.29e-08,64;UBERON:0002616,3.90e-08,46;UBERON:0010314,4.32e-08,92;UBERON:0000025,5.45e-07,114|phase1_expression=133.403989638293,124.933195934891,171.989712489245,91.3441918146627,94.6692929598596,89.9832897447729,98.3509216907163,64.9490316911129,83.0653460694834,79.1138098968338,43.3181459610528,39.0883579077148,69.6786970820007,70.8105259593879,80.2794525975747,123.712388375184,113.32902425676,125.23847964722,122.443189209925,137.077857530764,122.292251237238,83.106526155141,84.3675318918761,122.394203436956,145.216074915519,146.42915084933,162.397272551971,143.719312201488,108.123325670677,75.6090389279792,165.854421970168,38.7368710810375,39.9792111929971,63.3926724061755,43.6165945824425,47.0444046364533,42.8755648150975,292.972141515835,204.709860265236,258.620729523056,342.938957522081,330.594014719888,276.740901227758,284.526808624805,249.083120006347,193.641823530574,154.131094836564,116.643458663539,255.93440288566,233.121448990066,115.628784262549,129.377307928474,126.00473714936,66.7333170650437,54.7832892602216,154.87018049364,157.306858526377,162.436709067394,111.274053472779,154.994356926706,110.286664210075,135.876657359722,111.161849513892,502.593992101661,630.89673931773,525.044804945168,213.614878799623,151.382012296692,50.4968411942286,63.3177850775629,54.2638400286566,167.962778829437,171.393987778452,56.100786040449,53.3859273571577,44.122501757281,290.705925838386,233.029392005468,260.363073869333,127.534040235097,133.388984372313,114.600941522487,259.081823073281,253.805937124288,247.074766655102,148.492807078729,130.981946335175,128.615617619457,198.629805112942,244.851854745985,140.874141509015,144.551211332873,87.0363307145921,88.511323428602,118.259307975476,74.3724632581577,129.489755361475,140.775446449476,137.946368444123,140.982490229626,181.406324672364,59.0301796105862,22.9324715735981,14.2213340630666,78.1532658050483,79.8083576246561,85.4336312074984,96.5995622423247,108.236035364518,173.82574484491,74.4252051826723,130.311224717596,116.691441611566,127.360631266966,90.425715787357,111.968932874741,185.890615736249,124.500046308044,133.576193344431,88.6482337711802,115.500114154786,126.067565815158,76.4206220994301,211.387735442337,242.958179903608,83.5344570532094,69.0135117154101,66.5892031402683,85.1370521389534,300.480022646074,209.99277669375,95.9999250142284,284.898060795141,284.099873093997,279.474919932608,252.609646596499,67.4176588689094,144.312085907708,239.581174995124,151.097252526488,57.513235789515,79.0863239251147,63.7419939510936,68.8721017509218,72.9351270902235,78.9180516954675,83.3945348581587,155.480725814148,47.856094431091,53.7061267676607,59.9993333399066,72.3345917010997,68.9557178079483,80.0979983000983,96.3060398389175,54.5353891082671,75.8390242298294,69.2265870138584,81.8390878259307,70.2156368895351,79.0352822136294,76.7064381823923,78.835996949875,69.4577738068335,65.7177900900231,62.3190971931093,76.7261928002911,64.2209383019432,70.5961756128831,92.7546172046888,101.011736694136,120.176389663623,124.265365254735,136.622134298058,264.755045242236,113.709596679109,129.854581712633,63.9970371325777,44.7905326123991,45.7506243565064,48.9696353023955,70.9926006674166,77.6099373018597,120.032370077025,86.3642892011011,120.559634857976,116.116866465725,117.185362032238,115.613703661638,77.2984691442631,68.9480379100275,77.4659552959488,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54411 | |||
|HGNC= | |||
|MCL_coexpression_id=2709 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TKX1,B7FAU7,B7FAU3 | |||
|association_with_transcript=0bp_to_ENSMUST00000114171,ENSMUST00000135914,ENSMUST00000147275,ENSMUST00000147900_5end | |||
|cluster_id=chrX:71542459..71542517,+ | |||
|description=CAGE_peak_1_at_Atp6ap1_5end | |||
|id=chrX:71542459..71542517,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.08e-07!50 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.09e-14!102;UBERON:0000924!9.09e-14!102;UBERON:0006601!9.09e-14!102;UBERON:0000073!1.50e-13!75;UBERON:0001016!1.50e-13!75;UBERON:0001017!1.14e-12!73;UBERON:0005743!1.14e-12!73;UBERON:0007023!2.01e-10!51;UBERON:0001049!6.00e-10!52;UBERON:0005068!6.00e-10!52;UBERON:0006241!6.00e-10!52;UBERON:0007135!6.00e-10!52;UBERON:0000955!6.38e-10!50;UBERON:0006238!6.38e-10!50;UBERON:0002616!1.58e-09!49;UBERON:0000033!4.44e-09!63;UBERON:0004111!9.93e-09!122;UBERON:0002346!9.99e-09!71;UBERON:0003075!9.99e-09!71;UBERON:0007284!9.99e-09!71;UBERON:0002204!1.42e-08!32;UBERON:0000480!5.15e-07!308;UBERON:0000467!5.15e-07!308;UBERON:0000025!5.45e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.50e-13,75;UBERON:0004121,4.26e-13,95;UBERON:0000924,4.26e-13,95;UBERON:0006601,4.26e-13,95;UBERON:0001017,1.14e-12,73;UBERON:0000073,6.94e-11,54;UBERON:0007023,2.01e-10,51;UBERON:0001049,6.00e-10,52;UBERON:0005068,6.00e-10,52;UBERON:0006241,6.00e-10,52;UBERON:0007135,6.00e-10,52;UBERON:0010371,9.03e-09,73;UBERON:0004111,9.93e-09,122;UBERON:0002204,1.42e-08,32;UBERON:0000955,1.65e-08,47;UBERON:0006238,1.65e-08,47;UBERON:0002346,3.29e-08,64;UBERON:0003075,3.29e-08,64;UBERON:0007284,3.29e-08,64;UBERON:0002616,3.90e-08,46;UBERON:0010314,4.32e-08,92;UBERON:0000025,5.45e-07,114 | |||
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| |||
|short_description=p1@Atp6ap1 | |||
}} |
Latest revision as of 00:16, 2 October 2015
Short description: | p1@Atp6ap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Atp6ap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2709 |
Association with transcript: | 0bp_to_ENSMUST00000114171, ENSMUST00000135914, ENSMUST00000147275, ENSMUST00000147900_5end |
EntrezGene: | Atp6ap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.50e-13 | 75 |
ectoderm-derived structure | 4.26e-13 | 95 |
ectoderm | 4.26e-13 | 95 |
presumptive ectoderm | 4.26e-13 | 95 |
central nervous system | 1.14e-12 | 73 |
regional part of nervous system | 6.94e-11 | 54 |
adult organism | 2.01e-10 | 51 |
neural tube | 6.00e-10 | 52 |
neural rod | 6.00e-10 | 52 |
future spinal cord | 6.00e-10 | 52 |
neural keel | 6.00e-10 | 52 |
ecto-epithelium | 9.03e-09 | 73 |
anatomical conduit | 9.93e-09 | 122 |
musculoskeletal system | 1.42e-08 | 32 |
brain | 1.65e-08 | 47 |
future brain | 1.65e-08 | 47 |
neurectoderm | 3.29e-08 | 64 |
neural plate | 3.29e-08 | 64 |
presumptive neural plate | 3.29e-08 | 64 |
regional part of brain | 3.90e-08 | 46 |
structure with developmental contribution from neural crest | 4.32e-08 | 92 |
tube | 5.45e-07 | 114 |