FFCP PHASE1:Mm9::chr5:135554146..135554181,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=194309 | |EntrezGene=194309 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q810I0 | |UniProt=Q810I0 | ||
|association_with_transcript=-10bp_to_ENSMUST00000067935,ENSMUST00000076203,NM_001199677,NM_177574,uc008zxq.2,uc008zxr.2_5end | |association_with_transcript=-10bp_to_ENSMUST00000067935,ENSMUST00000076203,NM_001199677,NM_177574,uc008zxq.2,uc008zxr.2_5end | ||
|cluster_id=chr5:135554146..135554181,- | |||
|description=CAGE_peak_3_at_Vps37d_5end | |description=CAGE_peak_3_at_Vps37d_5end | ||
|id=chr5:135554146..135554181,- | |id=chr5:135554146..135554181,- | ||
|ontology_enrichment_celltype=CL:0000117!2.10e-15!23;CL:0000337!2.10e-15!23;CL:0000540!1.52e-14!33;CL:0000047!1.52e-14!33;CL:0000031!1.52e-14!33;CL:0000404!1.52e-14!33;CL:0000221!1.69e-13!44;CL:0000133!1.69e-13!44;CL:0002319!3.25e-13!43;CL:0000393!8.95e-12!39;CL:0000211!8.95e-12!39;CL:0000055!2.11e-10!50 | |ontology_enrichment_celltype=CL:0000117!2.10e-15!23;CL:0000337!2.10e-15!23;CL:0000540!1.52e-14!33;CL:0000047!1.52e-14!33;CL:0000031!1.52e-14!33;CL:0000404!1.52e-14!33;CL:0000221!1.69e-13!44;CL:0000133!1.69e-13!44;CL:0002319!3.25e-13!43;CL:0000393!8.95e-12!39;CL:0000211!8.95e-12!39;CL:0000055!2.11e-10!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.88e-18,23;CL:0000337,1.88e-18,23;CL:0000540,1.62e-15,33;CL:0000047,1.62e-15,33;CL:0000031,1.62e-15,33;CL:0000404,1.62e-15,33;CL:0000221,3.32e-14,44;CL:0000133,3.32e-14,44;CL:0002319,7.29e-14,43;CL:0000393,2.54e-12,39;CL:0000211,2.54e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.17e-27!73;UBERON:0005743!4.17e-27!73;UBERON:0000073!6.95e-26!75;UBERON:0001016!6.95e-26!75;UBERON:0001049!2.24e-23!52;UBERON:0005068!2.24e-23!52;UBERON:0006241!2.24e-23!52;UBERON:0007135!2.24e-23!52;UBERON:0002346!4.78e-23!71;UBERON:0003075!4.78e-23!71;UBERON:0007284!4.78e-23!71;UBERON:0000033!2.21e-22!63;UBERON:0000955!1.00e-21!50;UBERON:0006238!1.00e-21!50;UBERON:0002616!3.56e-21!49;UBERON:0004121!6.57e-21!102;UBERON:0000924!6.57e-21!102;UBERON:0006601!6.57e-21!102;UBERON:0003056!7.13e-19!49;UBERON:0003080!5.73e-17!40;UBERON:0002780!2.24e-16!39;UBERON:0001890!2.24e-16!39;UBERON:0006240!2.24e-16!39;UBERON:0002020!6.31e-16!34;UBERON:0002791!7.81e-13!29;UBERON:0003528!7.81e-13!29;UBERON:0001893!7.81e-13!29;UBERON:0000153!6.90e-11!94;UBERON:0007811!4.01e-10!86;UBERON:0000956!2.19e-08!21;UBERON:0001869!2.19e-08!21;UBERON:0000203!2.19e-08!21;UBERON:0003076!4.59e-07!12;UBERON:0003057!4.59e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!4.17e-27!73;UBERON:0005743!4.17e-27!73;UBERON:0000073!6.95e-26!75;UBERON:0001016!6.95e-26!75;UBERON:0001049!2.24e-23!52;UBERON:0005068!2.24e-23!52;UBERON:0006241!2.24e-23!52;UBERON:0007135!2.24e-23!52;UBERON:0002346!4.78e-23!71;UBERON:0003075!4.78e-23!71;UBERON:0007284!4.78e-23!71;UBERON:0000033!2.21e-22!63;UBERON:0000955!1.00e-21!50;UBERON:0006238!1.00e-21!50;UBERON:0002616!3.56e-21!49;UBERON:0004121!6.57e-21!102;UBERON:0000924!6.57e-21!102;UBERON:0006601!6.57e-21!102;UBERON:0003056!7.13e-19!49;UBERON:0003080!5.73e-17!40;UBERON:0002780!2.24e-16!39;UBERON:0001890!2.24e-16!39;UBERON:0006240!2.24e-16!39;UBERON:0002020!6.31e-16!34;UBERON:0002791!7.81e-13!29;UBERON:0003528!7.81e-13!29;UBERON:0001893!7.81e-13!29;UBERON:0000153!6.90e-11!94;UBERON:0007811!4.01e-10!86;UBERON:0000956!2.19e-08!21;UBERON:0001869!2.19e-08!21;UBERON:0000203!2.19e-08!21;UBERON:0003076!4.59e-07!12;UBERON:0003057!4.59e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.22e-30,73;UBERON:0001016,8.81e-29,75;UBERON:0000073,8.83e-29,54;UBERON:0001049,2.29e-27,52;UBERON:0005068,2.29e-27,52;UBERON:0006241,2.29e-27,52;UBERON:0007135,2.29e-27,52;UBERON:0002346,4.32e-27,64;UBERON:0003075,4.32e-27,64;UBERON:0007284,4.32e-27,64;UBERON:0004121,1.19e-24,95;UBERON:0000924,1.19e-24,95;UBERON:0006601,1.19e-24,95;UBERON:0000955,1.59e-23,47;UBERON:0006238,1.59e-23,47;UBERON:0002616,7.21e-23,46;UBERON:0010371,9.08e-23,73;UBERON:0003056,6.60e-21,49;UBERON:0003080,1.38e-19,40;UBERON:0002780,7.18e-19,39;UBERON:0001890,7.18e-19,39;UBERON:0006240,7.18e-19,39;UBERON:0002020,2.76e-18,34;UBERON:0003528,1.51e-14,29;UBERON:0002791,1.51e-14,29;UBERON:0001893,1.51e-14,29;UBERON:0010314,1.21e-13,92;UBERON:0000956,3.37e-09,21;UBERON:0001869,3.37e-09,21;UBERON:0000203,3.37e-09,21;UBERON:0003076,2.79e-08,12;UBERON:0003057,2.79e-08,12;UBERON:0002420,6.89e-07,8;UBERON:0007245,6.89e-07,8;UBERON:0010009,6.89e-07,8;UBERON:0010011,6.89e-07,8;UBERON:0000454,6.89e-07,8 | |||
|phase1_expression=2.24208385946712,0,1.36499771816861,0.60492842261366,1.50268718983904,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.10556277196391,0.198581902401771,0,0.319984845586813,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.570070258369122,1.00812051903972,0,0,0,0,0.288851619751275,0.831173226792462,0.408338712524738,0,0,0,0,0,0,1.00717454380462,1.11514624341466,0.550640256485045,2.34717403304412,2.61630187656536,0.659058548203415,1.94429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,13.7575193384526,5.28990979272033,8.87363964908651,2.03306719241479,0.889294796111139,0,0,0,2.09720077362883,2.30530983192933,8.19147937236973,7.02030879324791,7.78202357000113,4.57041575046086,3.75476519617743,6.85948475603743,7.28425579738596,4.5960939330501,2.20231761998777,3.95830748064082,3.07213066512487,11.6059933202571,13.5401712531566,9.37644067002168,3.90856198601933,5.06486349028512,3.66715794664344,4.71405736757868,6.83384067835694,10.4383689662168,0.302904773332736,0.226714680320357,0.579728977403356,0,0,0,0,0,0.280888840263504,0.340860645156116,0.519572009205738,1.06001872353102,1.97180787687353,0,2.54805239706646,0,0,0,0.505524445014783,0.45673551887624,0,0.445326417194474,1.56136794089522,0.913396434936424,0.691846491768175,0.904335843315735,0.470354828542819,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0,0,2.04946557908083,3.97948742945565,0.255457055208591,0,0,0,4.04434726393021,1.83000241127451,8.04187853522332,4.69325664519146,2.30143911597297,3.94797284663164,2.43361894601636,2.74966282395854,0.746441823660558,1.0108910337347,0.631325567659422,2.47228841629137,2.75882525320168,2.52086981727489,3.46621081022145,1.76894897793452,1.66547836370305,1.87403449119458,0.776110112217047,1.72454394346274,3.78212160335639,2.46331573829528,1.53437012699302,1.11218899690239,0.696504333044333,1.23469281844766,3.98068533636986,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0.946978942340841,0.196764231747404,0.771335564436891,0.465067889500816,0.804820204198858,0.934122738937356,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0,0,1.47202963994889,5.9684675179985,0,0.264450566663544,1.2797295032114,1.85789337488351,0.77320476793256,1.00841762311671,0.444756087689741,0.570676878337677,0,0.164698954724011,0.754005626400808,0.596869416123452,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,1.89667900953082,1.25673363870702,0,1.83286195060783,1.16371492300575,1.54298803758701,1.45444035385792,1.62371162777562,1.255989822731,1.72756029490521,0,0,0.589676985339609,0,0,0.241177159752417,0,0,0,0,0,0.744281895337007,0,0,0.358794827043824,0,0.554259570499814,2.4633883530163,0.651859905768103,0.509235257325564,1.17345124144251,0.670025029767263,0.714130922658041,1.17080188714679,0.945810864637146,0.8858587585951,0.159454768657487,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0,0,2.40825884981688,2.81308047821288,0,0.252470927204373,0.94652465824877,1.17131623288992,0.430846795465598,0.477937595905104,1.11399337041197,1.98153571552183,0.809621403349789,2.04579100537918,3.16230222357219,3.21321316421807,0.99358059645788,3.73937767701236,2.76907830901079,1.48473110675282,0,1.45668381692989,2.11626489875326,0.188605079755898,0.590603785761546,1.53717573971964,1.80899805217755,1.09060118843252,0.712994756769443,0.632073515871632,1.05418608574999,0,1.02131881726136,2.52085531643834,2.06973894052407,1.50035924522115,2.83744373827638,3.0322698992352,2.13913726782757,4.26250928760439,0,0,0.441056796109924,0.32977250588296,0.484393280087717,0.422190474497091,0.238744688006273,0,0.582961673259701,2.22510362412612,0,0.619160603889667,0.185194527369712,0,0,0,0.339956859987711,0,0.138199973804424,0,1.89801596148681,1.42323626988794,1.08005340821801,0.836353184057875,0.436725127492355,0.539457385539283,0.826534557253359,0.785267825952089,0.518459893167171,0,0,1.49516546043979,1.65458490457098,1.75006069509643,1.93739735216597,1.35164900392623,2.58185925020659,1.5624526181274,0.838874755405687,0,0.288030006257865,0,1.41907650703115,0.616265742988964,0.25984164595559,0,0.596044064343795,0.240390899039938,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.187682475451182,1.09890974560359,0.643105137237198,0,2.25900737046827,3.68260189205742,4.58316410751517,2.06223818812425,2.74033007908257,5.2877572817279,0,4.05289082901798,0.906284817968409,2.07104124700728,1.45302286617847,3.99024873401031,2.56100408631201,0.972426868273176,1.04806581313991,2.02227859295016,1.11123363900808,1.23621034343337,1.92551525755089,1.26348605881899,1.2673964994512,1.69763707247469,1.12369808963859,1.72867911493147,1.89537047553524,1.42888107384922,2.0859178670074,1.35036454324594,0.824171801606613,1.03039244094078,0.685738504770831,2.12970967391205,1.1921809497366,1.30811774969096,1.03520318456864,1.60767754994185,2.56099162021882,0.526139422875686,1.35804113845862,0.561142271657738,1.30498519936592,1.87158516513571,2.04615521584845,2.01417893541756,1.92906610981141,2.49810577937946,1.63752125911786,1.71896843238639,1.72159498861959,1.10295709559758,0.231867835620421 | |phase1_expression=2.24208385946712,0,1.36499771816861,0.60492842261366,1.50268718983904,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.10556277196391,0.198581902401771,0,0.319984845586813,0.22940928106717,0.57423196411502,0.86152399231815,0.215471232685889,0.570070258369122,1.00812051903972,0,0,0,0,0.288851619751275,0.831173226792462,0.408338712524738,0,0,0,0,0,0,1.00717454380462,1.11514624341466,0.550640256485045,2.34717403304412,2.61630187656536,0.659058548203415,1.94429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,13.7575193384526,5.28990979272033,8.87363964908651,2.03306719241479,0.889294796111139,0,0,0,2.09720077362883,2.30530983192933,8.19147937236973,7.02030879324791,7.78202357000113,4.57041575046086,3.75476519617743,6.85948475603743,7.28425579738596,4.5960939330501,2.20231761998777,3.95830748064082,3.07213066512487,11.6059933202571,13.5401712531566,9.37644067002168,3.90856198601933,5.06486349028512,3.66715794664344,4.71405736757868,6.83384067835694,10.4383689662168,0.302904773332736,0.226714680320357,0.579728977403356,0,0,0,0,0,0.280888840263504,0.340860645156116,0.519572009205738,1.06001872353102,1.97180787687353,0,2.54805239706646,0,0,0,0.505524445014783,0.45673551887624,0,0.445326417194474,1.56136794089522,0.913396434936424,0.691846491768175,0.904335843315735,0.470354828542819,0.376999773989026,0,0.144599356919912,0,0.323533699894818,0.662524555381181,0,0,2.04946557908083,3.97948742945565,0.255457055208591,0,0,0,4.04434726393021,1.83000241127451,8.04187853522332,4.69325664519146,2.30143911597297,3.94797284663164,2.43361894601636,2.74966282395854,0.746441823660558,1.0108910337347,0.631325567659422,2.47228841629137,2.75882525320168,2.52086981727489,3.46621081022145,1.76894897793452,1.66547836370305,1.87403449119458,0.776110112217047,1.72454394346274,3.78212160335639,2.46331573829528,1.53437012699302,1.11218899690239,0.696504333044333,1.23469281844766,3.98068533636986,0,0,0,0.207125772535502,0.938104239924385,0.36012412292203,0.946978942340841,0.196764231747404,0.771335564436891,0.465067889500816,0.804820204198858,0.934122738937356,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0,0,1.47202963994889,5.9684675179985,0,0.264450566663544,1.2797295032114,1.85789337488351,0.77320476793256,1.00841762311671,0.444756087689741,0.570676878337677,0,0.164698954724011,0.754005626400808,0.596869416123452,0.19496408711912,0.898819408654221,0.432276099749388,0.597423819763102,1.89667900953082,1.25673363870702,0,1.83286195060783,1.16371492300575,1.54298803758701,1.45444035385792,1.62371162777562,1.255989822731,1.72756029490521,0,0,0.589676985339609,0,0,0.241177159752417,0,0,0,0,0,0.744281895337007,0,0,0.358794827043824,0,0.554259570499814,2.4633883530163,0.651859905768103,0.509235257325564,1.17345124144251,0.670025029767263,0.714130922658041,1.17080188714679,0.945810864637146,0.8858587585951,0.159454768657487,0.491589944147214,0.345369963731791,0.289298117163023,0,0,0,0,2.40825884981688,2.81308047821288,0,0.252470927204373,0.94652465824877,1.17131623288992,0.430846795465598,0.477937595905104,1.11399337041197,1.98153571552183,0.809621403349789,2.04579100537918,3.16230222357219,3.21321316421807,0.99358059645788,3.73937767701236,2.76907830901079,1.48473110675282,0,1.45668381692989,2.11626489875326,0.188605079755898,0.590603785761546,1.53717573971964,1.80899805217755,1.09060118843252,0.712994756769443,0.632073515871632,1.05418608574999,0,1.02131881726136,2.52085531643834,2.06973894052407,1.50035924522115,2.83744373827638,3.0322698992352,2.13913726782757,4.26250928760439,0,0,0.441056796109924,0.32977250588296,0.484393280087717,0.422190474497091,0.238744688006273,0,0.582961673259701,2.22510362412612,0,0.619160603889667,0.185194527369712,0,0,0,0.339956859987711,0,0.138199973804424,0,1.89801596148681,1.42323626988794,1.08005340821801,0.836353184057875,0.436725127492355,0.539457385539283,0.826534557253359,0.785267825952089,0.518459893167171,0,0,1.49516546043979,1.65458490457098,1.75006069509643,1.93739735216597,1.35164900392623,2.58185925020659,1.5624526181274,0.838874755405687,0,0.288030006257865,0,1.41907650703115,0.616265742988964,0.25984164595559,0,0.596044064343795,0.240390899039938,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.187682475451182,1.09890974560359,0.643105137237198,0,2.25900737046827,3.68260189205742,4.58316410751517,2.06223818812425,2.74033007908257,5.2877572817279,0,4.05289082901798,0.906284817968409,2.07104124700728,1.45302286617847,3.99024873401031,2.56100408631201,0.972426868273176,1.04806581313991,2.02227859295016,1.11123363900808,1.23621034343337,1.92551525755089,1.26348605881899,1.2673964994512,1.69763707247469,1.12369808963859,1.72867911493147,1.89537047553524,1.42888107384922,2.0859178670074,1.35036454324594,0.824171801606613,1.03039244094078,0.685738504770831,2.12970967391205,1.1921809497366,1.30811774969096,1.03520318456864,1.60767754994185,2.56099162021882,0.526139422875686,1.35804113845862,0.561142271657738,1.30498519936592,1.87158516513571,2.04615521584845,2.01417893541756,1.92906610981141,2.49810577937946,1.63752125911786,1.71896843238639,1.72159498861959,1.10295709559758,0.231867835620421 | ||
|short_description=p3@Vps37d | |short_description=p3@Vps37d | ||
}} | }} |
Latest revision as of 00:08, 2 October 2015
Short description: | p3@Vps37d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Vps37d_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -10bp_to_ENSMUST00000067935, ENSMUST00000076203, NM_001199677, NM_177574, uc008zxq.2, uc008zxr.2_5end |
EntrezGene: | Vps37d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.88e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.88e-18 | 23 |
neuron | 1.62e-15 | 33 |
neuronal stem cell | 1.62e-15 | 33 |
neuroblast | 1.62e-15 | 33 |
electrically signaling cell | 1.62e-15 | 33 |
ectodermal cell | 3.32e-14 | 44 |
neurectodermal cell | 3.32e-14 | 44 |
neural cell | 7.29e-14 | 43 |
electrically responsive cell | 2.54e-12 | 39 |
electrically active cell | 2.54e-12 | 39 |