FFCP PHASE1:Mm9::chr3:40512838..40512859,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73333 | |EntrezGene=73333 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=70 | |MCL_coexpression_id=70 | ||
|TSSclassifier=NA | |||
|UniProt=B2RTC8,Q3V132 | |UniProt=B2RTC8,Q3V132 | ||
|association_with_transcript=45bp_to_NM_178386,uc008pbi.2_5end | |association_with_transcript=45bp_to_NM_178386,uc008pbi.2_5end | ||
|cluster_id=chr3:40512838..40512859,+ | |||
|description=CAGE_peak_2_at_Slc25a31_5end | |description=CAGE_peak_2_at_Slc25a31_5end | ||
|id=chr3:40512838..40512859,+ | |id=chr3:40512838..40512859,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.87e-26!18;UBERON:0005564!1.87e-26!18;UBERON:0004176!1.06e-24!17;UBERON:0009196!1.06e-24!17;UBERON:0009117!1.06e-24!17;UBERON:0000473!6.90e-20!14;UBERON:0003133!1.09e-18!24;UBERON:0003135!2.43e-18!15;UBERON:0003101!5.46e-17!16;UBERON:0000079!5.46e-17!16;UBERON:0005156!6.68e-17!26;UBERON:0000990!6.68e-17!26;UBERON:0002323!6.31e-12!37;UBERON:0004458!6.31e-12!37;UBERON:0003886!1.72e-11!38;UBERON:0002553!4.43e-11!39;UBERON:0000464!4.68e-07!57 | |ontology_enrichment_uberon=UBERON:0000991!1.87e-26!18;UBERON:0005564!1.87e-26!18;UBERON:0004176!1.06e-24!17;UBERON:0009196!1.06e-24!17;UBERON:0009117!1.06e-24!17;UBERON:0000473!6.90e-20!14;UBERON:0003133!1.09e-18!24;UBERON:0003135!2.43e-18!15;UBERON:0003101!5.46e-17!16;UBERON:0000079!5.46e-17!16;UBERON:0005156!6.68e-17!26;UBERON:0000990!6.68e-17!26;UBERON:0002323!6.31e-12!37;UBERON:0004458!6.31e-12!37;UBERON:0003886!1.72e-11!38;UBERON:0002553!4.43e-11!39;UBERON:0000464!4.68e-07!57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.36e-62,18;UBERON:0005564,1.36e-62,18;UBERON:0004176,2.10e-57,17;UBERON:0009196,2.10e-57,17;UBERON:0009117,2.10e-57,17;UBERON:0000473,2.57e-50,14;UBERON:0003135,6.86e-47,15;UBERON:0003133,1.26e-46,24;UBERON:0003101,6.83e-44,16;UBERON:0000079,6.83e-44,16;UBERON:0005156,6.16e-43,26;UBERON:0000990,6.16e-43,26;UBERON:0002323,9.19e-30,37;UBERON:0004458,9.19e-30,37;UBERON:0003886,6.08e-29,38;UBERON:0002553,3.65e-28,39;UBERON:0000992,1.45e-08,3;UBERON:0000926,4.73e-08,120;UBERON:0004120,4.73e-08,120;UBERON:0006603,4.73e-08,120;UBERON:0001048,5.08e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0.182975287204819,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0,0,0,1.39323986772945,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,3.20518086601059,3.25773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9298751794728,2.0932316446157,2.81279433777066,6.22243802700952,6.32883135040882,6.42033276864957,3.87278887530988,8.85389816938861,29.7800538169019,38.653459332161,21.6022504693399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.419226325255965,0,0,0,0,0,0,0,0,0,0.17230640686684,0.476293691283074,0,0.38581844092741,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0.182975287204819,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0,0,0,1.39323986772945,0,0,0,0,0,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,3.20518086601059,3.25773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.9298751794728,2.0932316446157,2.81279433777066,6.22243802700952,6.32883135040882,6.42033276864957,3.87278887530988,8.85389816938861,29.7800538169019,38.653459332161,21.6022504693399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.419226325255965,0,0,0,0,0,0,0,0,0,0.17230640686684,0.476293691283074,0,0.38581844092741,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p2@Slc25a31 | |short_description=p2@Slc25a31 | ||
}} | }} |
Latest revision as of 00:04, 2 October 2015
Short description: | p2@Slc25a31 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc25a31_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | 45bp_to_NM_178386, uc008pbi.2_5end |
EntrezGene: | Slc25a31 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 1.36e-62 | 18 |
gonad primordium | 1.36e-62 | 18 |
external genitalia | 2.10e-57 | 17 |
indifferent external genitalia | 2.10e-57 | 17 |
indifferent gonad | 2.10e-57 | 17 |
testis | 2.57e-50 | 14 |
male reproductive organ | 6.86e-47 | 15 |
reproductive organ | 1.26e-46 | 24 |
male organism | 6.83e-44 | 16 |
male reproductive system | 6.83e-44 | 16 |
reproductive structure | 6.16e-43 | 26 |
reproductive system | 6.16e-43 | 26 |
body cavity | 9.19e-30 | 37 |
body cavity or lining | 9.19e-30 | 37 |
body cavity precursor | 6.08e-29 | 38 |
anatomical cavity | 3.65e-28 | 39 |
female gonad | 1.45e-08 | 3 |
mesoderm | 4.73e-08 | 120 |
mesoderm-derived structure | 4.73e-08 | 120 |
presumptive mesoderm | 4.73e-08 | 120 |
primordium | 5.08e-07 | 134 |