FFCP PHASE1:Mm9::chr16:3847206..3847307,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=385674 | |EntrezGene=385674 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=B9EJW5 | |UniProt=B9EJW5 | ||
|association_with_transcript=0bp_to_ENSMUST00000041778,NM_001081217,uc007xyt.1_5end | |association_with_transcript=0bp_to_ENSMUST00000041778,NM_001081217,uc007xyt.1_5end | ||
|cluster_id=chr16:3847206..3847307,+ | |||
|description=CAGE_peak_1_at_Zfp174_5end | |description=CAGE_peak_1_at_Zfp174_5end | ||
|id=chr16:3847206..3847307,+ | |id=chr16:3847206..3847307,+ | ||
|ontology_enrichment_celltype=CL:0000540!7.98e-08!33;CL:0000047!7.98e-08!33;CL:0000031!7.98e-08!33;CL:0000404!7.98e-08!33 | |ontology_enrichment_celltype=CL:0000540!7.98e-08!33;CL:0000047!7.98e-08!33;CL:0000031!7.98e-08!33;CL:0000404!7.98e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.89e-08,33;CL:0000047,7.89e-08,33;CL:0000031,7.89e-08,33;CL:0000404,7.89e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.02e-19!102;UBERON:0000924!4.02e-19!102;UBERON:0006601!4.02e-19!102;UBERON:0002346!1.03e-16!71;UBERON:0003075!1.03e-16!71;UBERON:0007284!1.03e-16!71;UBERON:0001017!2.57e-16!73;UBERON:0005743!2.57e-16!73;UBERON:0000073!1.82e-15!75;UBERON:0001016!1.82e-15!75;UBERON:0001049!4.89e-13!52;UBERON:0005068!4.89e-13!52;UBERON:0006241!4.89e-13!52;UBERON:0007135!4.89e-13!52;UBERON:0000955!7.23e-13!50;UBERON:0006238!7.23e-13!50;UBERON:0000033!1.14e-12!63;UBERON:0002616!2.91e-12!49;UBERON:0003056!1.14e-10!49;UBERON:0002020!1.72e-10!34;UBERON:0003080!1.73e-10!40;UBERON:0002780!2.69e-10!39;UBERON:0001890!2.69e-10!39;UBERON:0006240!2.69e-10!39;UBERON:0000468!2.82e-10!333;UBERON:0002791!4.64e-09!29;UBERON:0003528!4.64e-09!29;UBERON:0001893!4.64e-09!29;UBERON:0000922!2.26e-08!328;UBERON:0000475!1.39e-07!200;UBERON:0004111!5.19e-07!122;UBERON:0000025!5.93e-07!114;UBERON:0000956!9.30e-07!21;UBERON:0001869!9.30e-07!21;UBERON:0000203!9.30e-07!21 | |ontology_enrichment_uberon=UBERON:0004121!4.02e-19!102;UBERON:0000924!4.02e-19!102;UBERON:0006601!4.02e-19!102;UBERON:0002346!1.03e-16!71;UBERON:0003075!1.03e-16!71;UBERON:0007284!1.03e-16!71;UBERON:0001017!2.57e-16!73;UBERON:0005743!2.57e-16!73;UBERON:0000073!1.82e-15!75;UBERON:0001016!1.82e-15!75;UBERON:0001049!4.89e-13!52;UBERON:0005068!4.89e-13!52;UBERON:0006241!4.89e-13!52;UBERON:0007135!4.89e-13!52;UBERON:0000955!7.23e-13!50;UBERON:0006238!7.23e-13!50;UBERON:0000033!1.14e-12!63;UBERON:0002616!2.91e-12!49;UBERON:0003056!1.14e-10!49;UBERON:0002020!1.72e-10!34;UBERON:0003080!1.73e-10!40;UBERON:0002780!2.69e-10!39;UBERON:0001890!2.69e-10!39;UBERON:0006240!2.69e-10!39;UBERON:0000468!2.82e-10!333;UBERON:0002791!4.64e-09!29;UBERON:0003528!4.64e-09!29;UBERON:0001893!4.64e-09!29;UBERON:0000922!2.26e-08!328;UBERON:0000475!1.39e-07!200;UBERON:0004111!5.19e-07!122;UBERON:0000025!5.93e-07!114;UBERON:0000956!9.30e-07!21;UBERON:0001869!9.30e-07!21;UBERON:0000203!9.30e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.50e-16,73;UBERON:0004121,8.48e-16,95;UBERON:0000924,8.48e-16,95;UBERON:0006601,8.48e-16,95;UBERON:0001016,1.77e-15,75;UBERON:0000073,8.31e-14,54;UBERON:0002346,1.69e-13,64;UBERON:0003075,1.69e-13,64;UBERON:0007284,1.69e-13,64;UBERON:0001049,4.79e-13,52;UBERON:0005068,4.79e-13,52;UBERON:0006241,4.79e-13,52;UBERON:0007135,4.79e-13,52;UBERON:0010371,1.45e-12,73;UBERON:0000955,5.51e-12,47;UBERON:0006238,5.51e-12,47;UBERON:0002616,2.17e-11,46;UBERON:0010314,7.83e-11,92;UBERON:0003056,1.12e-10,49;UBERON:0002020,1.70e-10,34;UBERON:0003080,1.71e-10,40;UBERON:0002780,2.65e-10,39;UBERON:0001890,2.65e-10,39;UBERON:0006240,2.65e-10,39;UBERON:0003528,4.58e-09,29;UBERON:0002791,4.58e-09,29;UBERON:0001893,4.58e-09,29;UBERON:0004111,5.16e-07,122;UBERON:0000025,5.90e-07,114;UBERON:0000956,9.22e-07,21;UBERON:0001869,9.22e-07,21;UBERON:0000203,9.22e-07,21 | |||
|phase1_expression=4.00372117761985,1.04692622291808,1.81999695755814,3.0246421130683,2.00358291978539,1.51091344720701,0.700837921786577,2.84071311571468,0.84473233291,0.468129052643987,0.856089841127525,0.638177271962691,2.56801094896809,1.31130603628496,0.666219523631325,0.404950534779652,0,2.5236973228659,3.15363197293199,4.2438965179803,3.48677489619386,0.0992909512008853,0,0.639969691173627,0.68822784320151,1.14846392823004,0.430761996159075,0.430942465371778,1.33016393619462,1.00812051903972,0.221730510655305,4.44521471421742,1.23012957516914,0,1.44425809875637,2.1610503896604,1.83752420636132,1.25559489221072,0,2.09409497589519,1.76469446409304,2.73218193983378,0,2.7697299954627,4.46058497365864,4.22157529971868,4.69434806608824,3.48840250208714,3.29529274101708,3.4997381833371,2.65974201088189,1.43752564364972,1.67782606057736,0,1.34437519656986,0,4.58453503902011,1.03134418455488,7.89034197352431,6.87688273053643,6.97214543856797,1.35537812827653,3.55717918444456,1.7997994345628,0.988866362566974,0.7104801149461,3.29560121570245,4.61061966385865,3.52544681848824,4.45519596494579,3.57552434297349,5.71301968807607,4.41737081903227,5.38959516545798,4.98396449294829,5.51531271966013,6.60695285996332,4.59674417106676,5.37622866396852,6.4624280987795,7.13603620098795,6.25096044668112,4.18774498502071,3.37657566019008,6.57032465440283,6.18720029494702,6.40672563595963,5.03278503728312,1.96888102666279,3.24957708459178,2.6087803983151,3.44169550792555,0,2.15881276655127,7.79731700937203,7.16843019355737,3.37066608316204,1.53387290320252,2.59786004602869,0.35333957451034,3.09855523508697,2.56652954828636,15.2883143823987,7.11066703153331,0.432982082022428,0.253359865475099,0.505524445014783,1.7127581957859,4.91981978929626,9.20341262201914,2.60227990149204,11.2652226975492,13.3756988408514,25.6228488939458,17.7558947774914,10.1789938977037,9.64060374164058,6.36237170447611,0.884610551949874,2.42650274921114,2.20841518460394,3.39412677194655,1.86391761218122,5.5628351432194,6.91174132484402,1.78819938646014,0.479260498023681,0.599902730993408,0.762421362438388,4.94309110035915,6.40500843946077,6.28271760564322,8.34356736922927,8.69432554923124,4.1557608911912,5.84068547043927,4.48093200941392,3.6078021476927,4.29628689337247,3.36706969418358,3.25301107406759,2.75882525320168,3.42118046630164,4.67184935290717,5.10273743634959,4.99643509110914,5.62210347358373,6.46758426847539,0.646703978798527,3.40390944302075,5.27853372491847,3.5071317188412,4.17070873838397,5.92028683087683,6.1734640922383,3.38358253591438,0.702213187313235,1.02939162845886,1.42081749697796,0.828503090142008,2.81431271977315,1.62055855314913,1.89395788468168,1.96764231747404,2.77680803197281,2.79040733700489,1.07309360559848,3.73649095574942,2.46839774870221,4.26835406605648,4.05344047729279,3.36259971078264,4.39100230582101,5.09984391289413,6.30869845692382,5.86556290561921,3.96502539580558,2.3800550999719,3.19932375802851,2.32236671860439,3.22168653305233,1.61346819698674,2.44615848229357,2.85338439168839,1.42358718463353,2.14108641141214,2.76468729680296,2.98434708061726,5.26403035221624,4.49409704327111,2.59365659849633,4.18196673834171,2.0863469104839,2.62771579002376,6.76246414038483,3.86937522906097,3.49114476901726,2.52488951605147,4.3000845244495,4.57591458736767,5.02395929092399,3.70191491765402,5.03969466048153,2.16898637430922,1.96558995113203,0.899448449539415,2.23146133527353,3.85883455603867,1.52775511068852,5.75392274901621,3.24270453550071,2.47105271869273,5.75072826109418,2.97712758134803,6.24075346229121,4.79899868099512,4.66433275156972,8.68398338454061,3.32555742299888,1.89491411770485,2.93336957595647,4.07388205860452,1.87752198630802,3.51763140627813,3.57065461329021,4.09780660501378,3.62560831444239,3.5434350343804,3.6674596791222,5.57135270033509,3.10832967358612,3.61622646453779,4.52373851817817,1.08781136763742,2.95058563811422,3.58717770196152,4.17431533968259,4.68846746368813,2.62295912602681,6.5642441073137,2.52406575533005,5.46614242015294,5.60100834105277,3.82350076724083,6.23836287430704,4.81230102341015,5.26253912177363,4.9683495844923,5.13874111330481,11.5675673911851,6.38730383437209,5.52003371368491,4.56083486190013,5.77395430403874,11.9470624505967,4.61283208694465,5.74414758233027,4.14931175462976,5.02013217897314,10.4527950300935,5.68542244970086,8.36127577798263,4.27796854061666,6.32073515871632,3.16255825724996,4.12542172992747,8.17055053809091,3.06103859853227,5.95049945400671,3.42939256050548,4.43350584105684,6.0645397984704,5.59466670047211,3.95804433848979,1.17335854031855,5.50763384245932,3.74898276693435,3.46261131177108,5.32832608096488,3.37752379597673,3.58117032009409,3.61109979439135,3.20628920292836,4.63563255026274,1.36696704638282,3.50857675537478,2.96311243791539,1.31857919903284,1.36694227721025,1.37266903923914,2.03974115992626,1.53946597556024,1.65839968565309,2.86401185404534,2.05618395827738,4.06638934253697,3.24016022465404,3.97267762427491,3.49380101993884,3.37160865962052,2.97552440611209,2.35580347785627,3.24037433229482,4.97071450469541,2.81846469342095,3.28936401296753,2.48187735685646,3.69457257853691,4.00395452780966,5.91346439217724,5.51579021635044,3.6457227756306,3.25063967719704,5.55643477899814,6.04863013141517,2.8441000856536,0.608175645870493,2.15693010046137,2.20865399062252,1.43221356533985,1.78813219303138,1.56254084375959,1.77227432609493,2.82706059854813,3.04827226619999,1.71404514732629,2.72882066071307,2.79014340756955,4.55819918508119,2.94749498699775,1.33191572024439,2.06341870201794,1.17519231454855,5.9888774149979,2.43987218086537,2.74727436400898,2.57242054894879,3.51100472824754,9.60078132449013,6.90487854760765,5.72895513439397,8.248952752497,8.90607275701835,3.7769694869485,8.10027000278167,9.45674526770863,8.15656336171568,10.3552062350364,2.38710899443606,1.59609949360412,2.21953687480374,4.132814190161,2.93458427679175,4.22840069435032,4.00044110042907,4.94484137373346,3.85103051510178,4.29585259998456,4.81610669791456,3.58390048633545,4.30750934361459,4.35371036353111,3.56099907524802,8.57328644309533,4.40360438590451,4.43691207066522,4.53294490883637,4.71036544430071,3.42869252385415,4.08194354166476,3.57654284920981,4.94177816549917,4.42314087952054,4.65380343404221,5.12198324043763,5.5244639401947,5.16055632614275,4.48913817326191,4.50813068871862,3.54616136552028,4.91077251803627,3.25367366490529,6.94463799532109,5.49583271463481,4.67863216890817,6.01638951335235,2.10417165275728,3.97064554415128,2.78241402744506 | |phase1_expression=4.00372117761985,1.04692622291808,1.81999695755814,3.0246421130683,2.00358291978539,1.51091344720701,0.700837921786577,2.84071311571468,0.84473233291,0.468129052643987,0.856089841127525,0.638177271962691,2.56801094896809,1.31130603628496,0.666219523631325,0.404950534779652,0,2.5236973228659,3.15363197293199,4.2438965179803,3.48677489619386,0.0992909512008853,0,0.639969691173627,0.68822784320151,1.14846392823004,0.430761996159075,0.430942465371778,1.33016393619462,1.00812051903972,0.221730510655305,4.44521471421742,1.23012957516914,0,1.44425809875637,2.1610503896604,1.83752420636132,1.25559489221072,0,2.09409497589519,1.76469446409304,2.73218193983378,0,2.7697299954627,4.46058497365864,4.22157529971868,4.69434806608824,3.48840250208714,3.29529274101708,3.4997381833371,2.65974201088189,1.43752564364972,1.67782606057736,0,1.34437519656986,0,4.58453503902011,1.03134418455488,7.89034197352431,6.87688273053643,6.97214543856797,1.35537812827653,3.55717918444456,1.7997994345628,0.988866362566974,0.7104801149461,3.29560121570245,4.61061966385865,3.52544681848824,4.45519596494579,3.57552434297349,5.71301968807607,4.41737081903227,5.38959516545798,4.98396449294829,5.51531271966013,6.60695285996332,4.59674417106676,5.37622866396852,6.4624280987795,7.13603620098795,6.25096044668112,4.18774498502071,3.37657566019008,6.57032465440283,6.18720029494702,6.40672563595963,5.03278503728312,1.96888102666279,3.24957708459178,2.6087803983151,3.44169550792555,0,2.15881276655127,7.79731700937203,7.16843019355737,3.37066608316204,1.53387290320252,2.59786004602869,0.35333957451034,3.09855523508697,2.56652954828636,15.2883143823987,7.11066703153331,0.432982082022428,0.253359865475099,0.505524445014783,1.7127581957859,4.91981978929626,9.20341262201914,2.60227990149204,11.2652226975492,13.3756988408514,25.6228488939458,17.7558947774914,10.1789938977037,9.64060374164058,6.36237170447611,0.884610551949874,2.42650274921114,2.20841518460394,3.39412677194655,1.86391761218122,5.5628351432194,6.91174132484402,1.78819938646014,0.479260498023681,0.599902730993408,0.762421362438388,4.94309110035915,6.40500843946077,6.28271760564322,8.34356736922927,8.69432554923124,4.1557608911912,5.84068547043927,4.48093200941392,3.6078021476927,4.29628689337247,3.36706969418358,3.25301107406759,2.75882525320168,3.42118046630164,4.67184935290717,5.10273743634959,4.99643509110914,5.62210347358373,6.46758426847539,0.646703978798527,3.40390944302075,5.27853372491847,3.5071317188412,4.17070873838397,5.92028683087683,6.1734640922383,3.38358253591438,0.702213187313235,1.02939162845886,1.42081749697796,0.828503090142008,2.81431271977315,1.62055855314913,1.89395788468168,1.96764231747404,2.77680803197281,2.79040733700489,1.07309360559848,3.73649095574942,2.46839774870221,4.26835406605648,4.05344047729279,3.36259971078264,4.39100230582101,5.09984391289413,6.30869845692382,5.86556290561921,3.96502539580558,2.3800550999719,3.19932375802851,2.32236671860439,3.22168653305233,1.61346819698674,2.44615848229357,2.85338439168839,1.42358718463353,2.14108641141214,2.76468729680296,2.98434708061726,5.26403035221624,4.49409704327111,2.59365659849633,4.18196673834171,2.0863469104839,2.62771579002376,6.76246414038483,3.86937522906097,3.49114476901726,2.52488951605147,4.3000845244495,4.57591458736767,5.02395929092399,3.70191491765402,5.03969466048153,2.16898637430922,1.96558995113203,0.899448449539415,2.23146133527353,3.85883455603867,1.52775511068852,5.75392274901621,3.24270453550071,2.47105271869273,5.75072826109418,2.97712758134803,6.24075346229121,4.79899868099512,4.66433275156972,8.68398338454061,3.32555742299888,1.89491411770485,2.93336957595647,4.07388205860452,1.87752198630802,3.51763140627813,3.57065461329021,4.09780660501378,3.62560831444239,3.5434350343804,3.6674596791222,5.57135270033509,3.10832967358612,3.61622646453779,4.52373851817817,1.08781136763742,2.95058563811422,3.58717770196152,4.17431533968259,4.68846746368813,2.62295912602681,6.5642441073137,2.52406575533005,5.46614242015294,5.60100834105277,3.82350076724083,6.23836287430704,4.81230102341015,5.26253912177363,4.9683495844923,5.13874111330481,11.5675673911851,6.38730383437209,5.52003371368491,4.56083486190013,5.77395430403874,11.9470624505967,4.61283208694465,5.74414758233027,4.14931175462976,5.02013217897314,10.4527950300935,5.68542244970086,8.36127577798263,4.27796854061666,6.32073515871632,3.16255825724996,4.12542172992747,8.17055053809091,3.06103859853227,5.95049945400671,3.42939256050548,4.43350584105684,6.0645397984704,5.59466670047211,3.95804433848979,1.17335854031855,5.50763384245932,3.74898276693435,3.46261131177108,5.32832608096488,3.37752379597673,3.58117032009409,3.61109979439135,3.20628920292836,4.63563255026274,1.36696704638282,3.50857675537478,2.96311243791539,1.31857919903284,1.36694227721025,1.37266903923914,2.03974115992626,1.53946597556024,1.65839968565309,2.86401185404534,2.05618395827738,4.06638934253697,3.24016022465404,3.97267762427491,3.49380101993884,3.37160865962052,2.97552440611209,2.35580347785627,3.24037433229482,4.97071450469541,2.81846469342095,3.28936401296753,2.48187735685646,3.69457257853691,4.00395452780966,5.91346439217724,5.51579021635044,3.6457227756306,3.25063967719704,5.55643477899814,6.04863013141517,2.8441000856536,0.608175645870493,2.15693010046137,2.20865399062252,1.43221356533985,1.78813219303138,1.56254084375959,1.77227432609493,2.82706059854813,3.04827226619999,1.71404514732629,2.72882066071307,2.79014340756955,4.55819918508119,2.94749498699775,1.33191572024439,2.06341870201794,1.17519231454855,5.9888774149979,2.43987218086537,2.74727436400898,2.57242054894879,3.51100472824754,9.60078132449013,6.90487854760765,5.72895513439397,8.248952752497,8.90607275701835,3.7769694869485,8.10027000278167,9.45674526770863,8.15656336171568,10.3552062350364,2.38710899443606,1.59609949360412,2.21953687480374,4.132814190161,2.93458427679175,4.22840069435032,4.00044110042907,4.94484137373346,3.85103051510178,4.29585259998456,4.81610669791456,3.58390048633545,4.30750934361459,4.35371036353111,3.56099907524802,8.57328644309533,4.40360438590451,4.43691207066522,4.53294490883637,4.71036544430071,3.42869252385415,4.08194354166476,3.57654284920981,4.94177816549917,4.42314087952054,4.65380343404221,5.12198324043763,5.5244639401947,5.16055632614275,4.48913817326191,4.50813068871862,3.54616136552028,4.91077251803627,3.25367366490529,6.94463799532109,5.49583271463481,4.67863216890817,6.01638951335235,2.10417165275728,3.97064554415128,2.78241402744506 | ||
|short_description=p1@Zfp174 | |short_description=p1@Zfp174 | ||
}} | }} |
Latest revision as of 23:59, 1 October 2015
Short description: | p1@Zfp174 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp174_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000041778, NM_001081217, uc007xyt.1_5end |
EntrezGene: | Zfp174 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.89e-08 | 33 |
neuronal stem cell | 7.89e-08 | 33 |
neuroblast | 7.89e-08 | 33 |
electrically signaling cell | 7.89e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.50e-16 | 73 |
ectoderm-derived structure | 8.48e-16 | 95 |
ectoderm | 8.48e-16 | 95 |
presumptive ectoderm | 8.48e-16 | 95 |
nervous system | 1.77e-15 | 75 |
regional part of nervous system | 8.31e-14 | 54 |
neurectoderm | 1.69e-13 | 64 |
neural plate | 1.69e-13 | 64 |
presumptive neural plate | 1.69e-13 | 64 |
neural tube | 4.79e-13 | 52 |
neural rod | 4.79e-13 | 52 |
future spinal cord | 4.79e-13 | 52 |
neural keel | 4.79e-13 | 52 |
ecto-epithelium | 1.45e-12 | 73 |
brain | 5.51e-12 | 47 |
future brain | 5.51e-12 | 47 |
regional part of brain | 2.17e-11 | 46 |
structure with developmental contribution from neural crest | 7.83e-11 | 92 |
pre-chordal neural plate | 1.12e-10 | 49 |
gray matter | 1.70e-10 | 34 |
anterior neural tube | 1.71e-10 | 40 |
regional part of forebrain | 2.65e-10 | 39 |
forebrain | 2.65e-10 | 39 |
future forebrain | 2.65e-10 | 39 |
brain grey matter | 4.58e-09 | 29 |
regional part of telencephalon | 4.58e-09 | 29 |
telencephalon | 4.58e-09 | 29 |
anatomical conduit | 5.16e-07 | 122 |
tube | 5.90e-07 | 114 |
cerebral cortex | 9.22e-07 | 21 |
cerebral hemisphere | 9.22e-07 | 21 |
pallium | 9.22e-07 | 21 |