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FFCP PHASE1:Mm9::chr13:88961148..88961185,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13612
|EntrezGene=13612
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000133761,ENSMUST00000134241_5end
|association_with_transcript=0bp_to_ENSMUST00000133761,ENSMUST00000134241_5end
|cluster_id=chr13:88961148..88961185,+
|description=CAGE_peak_2_at_Edil3_5end
|description=CAGE_peak_2_at_Edil3_5end
|id=chr13:88961148..88961185,+
|id=chr13:88961148..88961185,+
|ontology_enrichment_celltype=CL:0000117!2.17e-14!23;CL:0000337!2.17e-14!23;CL:0000540!5.45e-14!33;CL:0000047!5.45e-14!33;CL:0000031!5.45e-14!33;CL:0000404!5.45e-14!33;CL:0002319!6.25e-11!43;CL:0000221!6.77e-11!44;CL:0000133!6.77e-11!44;CL:0000393!2.74e-10!39;CL:0000211!2.74e-10!39;CL:0000055!7.27e-08!50
|ontology_enrichment_celltype=CL:0000117!2.17e-14!23;CL:0000337!2.17e-14!23;CL:0000540!5.45e-14!33;CL:0000047!5.45e-14!33;CL:0000031!5.45e-14!33;CL:0000404!5.45e-14!33;CL:0002319!6.25e-11!43;CL:0000221!6.77e-11!44;CL:0000133!6.77e-11!44;CL:0000393!2.74e-10!39;CL:0000211!2.74e-10!39;CL:0000055!7.27e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.85e-17,23;CL:0000337,3.85e-17,23;CL:0000540,6.21e-12,33;CL:0000047,6.21e-12,33;CL:0000031,6.21e-12,33;CL:0000404,6.21e-12,33;CL:0000393,1.10e-08,39;CL:0000211,1.10e-08,39;CL:0002319,1.73e-08,43;CL:0000221,4.35e-08,44;CL:0000133,4.35e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.53e-28!75;UBERON:0001016!3.53e-28!75;UBERON:0001017!7.24e-28!73;UBERON:0005743!7.24e-28!73;UBERON:0000033!8.95e-25!63;UBERON:0001049!3.12e-24!52;UBERON:0005068!3.12e-24!52;UBERON:0006241!3.12e-24!52;UBERON:0007135!3.12e-24!52;UBERON:0002346!1.07e-23!71;UBERON:0003075!1.07e-23!71;UBERON:0007284!1.07e-23!71;UBERON:0000955!6.30e-23!50;UBERON:0006238!6.30e-23!50;UBERON:0004121!1.17e-22!102;UBERON:0000924!1.17e-22!102;UBERON:0006601!1.17e-22!102;UBERON:0002616!2.23e-22!49;UBERON:0003056!3.55e-22!49;UBERON:0003080!1.87e-18!40;UBERON:0002020!3.23e-18!34;UBERON:0002780!9.90e-18!39;UBERON:0001890!9.90e-18!39;UBERON:0006240!9.90e-18!39;UBERON:0002791!6.41e-15!29;UBERON:0003528!6.41e-15!29;UBERON:0001893!6.41e-15!29;UBERON:0007811!2.44e-11!86;UBERON:0000153!3.36e-11!94;UBERON:0000956!4.25e-10!21;UBERON:0001869!4.25e-10!21;UBERON:0000203!4.25e-10!21;UBERON:0002619!6.07e-08!17;UBERON:0000025!8.17e-08!114;UBERON:0002021!1.37e-07!10;UBERON:0000411!1.37e-07!10;UBERON:0001950!1.37e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.29e-30,64;UBERON:0003075,4.29e-30,64;UBERON:0007284,4.29e-30,64;UBERON:0000073,1.27e-29,54;UBERON:0001049,1.60e-27,52;UBERON:0005068,1.60e-27,52;UBERON:0006241,1.60e-27,52;UBERON:0007135,1.60e-27,52;UBERON:0001017,3.28e-27,73;UBERON:0001016,3.46e-27,75;UBERON:0004121,8.28e-26,95;UBERON:0000924,8.28e-26,95;UBERON:0006601,8.28e-26,95;UBERON:0003056,1.80e-25,49;UBERON:0010371,1.04e-23,73;UBERON:0000955,7.21e-23,47;UBERON:0006238,7.21e-23,47;UBERON:0002616,3.44e-22,46;UBERON:0002020,5.86e-22,34;UBERON:0003080,1.12e-20,40;UBERON:0002780,9.05e-20,39;UBERON:0001890,9.05e-20,39;UBERON:0006240,9.05e-20,39;UBERON:0010314,5.81e-18,92;UBERON:0003528,1.02e-17,29;UBERON:0002791,1.02e-17,29;UBERON:0001893,1.02e-17,29;UBERON:0000956,1.51e-11,21;UBERON:0001869,1.51e-11,21;UBERON:0000203,1.51e-11,21;UBERON:0002021,2.16e-09,10;UBERON:0000411,2.16e-09,10;UBERON:0001950,2.16e-09,10;UBERON:0002619,8.33e-09,17;UBERON:0000025,1.00e-08,114;UBERON:0002420,1.43e-07,8;UBERON:0007245,1.43e-07,8;UBERON:0010009,1.43e-07,8;UBERON:0010011,1.43e-07,8;UBERON:0000454,1.43e-07,8;UBERON:0003076,2.61e-07,12;UBERON:0003057,2.61e-07,12;UBERON:0004111,4.56e-07,122
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0,7.48570905180512,10.0508286061686,3.80298842103708,3.04960078862219,2.66788438833342,0,0,0,1.19840044207362,0,5.49554945234932,5.94026128659439,6.09942387919008,9.99778445413313,6.84692476950002,3.42974237801871,2.68367318851062,0.919218786610021,19.82085857989,17.4931653176707,19.6616362567992,7.91317726381163,5.85520919055422,7.8137005583514,11.4465029590566,13.5063026407603,8.55670187550137,15.9099436155781,9.11178757114259,9.69277118291563,0.227178579999552,3.02286240427142,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.5709193985953,0,0,0.173485326766136,0,0,0.150722640552623,0.470354828542819,0,0,0,0,0.647067399789637,0.220841518460394,1.93950101254089,0,4.68449275218475,3.35114730901528,0,0,0,0,12.1330417917906,10.0650132620098,3.8952849154988,9.38651329038293,5.8814555185976,12.259494629014,10.8701646255398,0.203678727700633,0.124406970610093,0,1.89397670297827,2.08192708740326,2.29902104433473,3.78130472591233,2.26057226753573,2.72145996605311,2.94661556655154,2.81105173679186,4.39795730256327,0.215567992932842,1.51284864134255,2.11141348996739,0.657587197282725,1.11218899690239,0,0.411564272815887,1.59227413454795,0,0,0,4.34964122324554,2.81431271977315,1.80062061461015,1.65721314909647,0.393528463494808,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0.134206418760372,7.57043814830858,8.84979666461846,0,0,2.13288250535234,3.0190767341857,1.15980715189884,0.403367049246685,0.667134131534611,0.951128130562796,0,0.988193728344065,1.00534083520108,0.198956472041151,0.38992817423824,0,0,0,0.379335801906163,0.571242563048644,3.38123207019241,0.407302655690628,0,0.350679099451593,0.189709611372772,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,1.32643988239339,0.977789858652155,0.848725428875941,0.938760993154008,1.50755631697634,1.6663054862021,0.780534591431195,2.04925687338048,2.6575762757853,1.91345722388985,0.81931657357869,1.20879487306127,0.433947175744535,0,0,0,0,15.0917554588524,16.175212749724,0.655739781506702,0.504941854408746,0.631016438832513,0.780877488593277,0.646270193198397,0.477937595905104,0.668396022247182,0.849229592366497,2.42886421004937,1.75353514746787,1.18586333383957,4.17717711348349,0,0.890328018336276,1.14020871547503,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,7.14923172082955,1.26042765821917,0.905510786479282,1.50035924522115,1.06404140185364,2.85390108163313,1.97458824722545,0.608929898229199,0.23467170806371,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,16.6882771809459,0,0.206386867963223,0,0,0,0,0.509935289981566,0,0.138199973804424,0,1.10717597753397,0.813277868507395,0.216010681643603,0.627264888043406,0.436725127492355,0.134864346384821,0.330613822901344,0,0.388844919875379,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,10.7302850097243,6.90487854760765,10.3121192419091,10.1393377582776,8.90607275701835,9.06472676867641,4.05013500139084,13.0593148935024,10.4222754066367,8.28416498802912,0.726511433089237,2.79317411380722,2.56100408631201,2.91728060481953,1.04806581313991,0.919217542250071,2.22246727801615,1.44224540067226,1.92551525755089,1.01078884705519,2.78827229879264,1.69763707247469,1.40462261204824,1.98477972455095,1.95280594449085,1.90517476513229,1.97003354106254,2.12200142510076,2.06042950401653,1.03039244094078,0.685738504770831,1.59728225543404,2.38436189947321,1.59881058295561,1.31753132581463,1.35383372626682,1.82927972872773,1.57841826862706,2.03706170768793,0,2.37270036248348,1.37906275325789,0.818462086339379,1.23949472948773,1.35034627686799,4.24677982494508,1.87145286756327,2.36358159453128,1.53030665655075,1.10295709559758,0.695603506861264
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0.219686182734472,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0,7.48570905180512,10.0508286061686,3.80298842103708,3.04960078862219,2.66788438833342,0,0,0,1.19840044207362,0,5.49554945234932,5.94026128659439,6.09942387919008,9.99778445413313,6.84692476950002,3.42974237801871,2.68367318851062,0.919218786610021,19.82085857989,17.4931653176707,19.6616362567992,7.91317726381163,5.85520919055422,7.8137005583514,11.4465029590566,13.5063026407603,8.55670187550137,15.9099436155781,9.11178757114259,9.69277118291563,0.227178579999552,3.02286240427142,0,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0.505524445014783,0.5709193985953,0,0,0.173485326766136,0,0,0.150722640552623,0.470354828542819,0,0,0,0,0.647067399789637,0.220841518460394,1.93950101254089,0,4.68449275218475,3.35114730901528,0,0,0,0,12.1330417917906,10.0650132620098,3.8952849154988,9.38651329038293,5.8814555185976,12.259494629014,10.8701646255398,0.203678727700633,0.124406970610093,0,1.89397670297827,2.08192708740326,2.29902104433473,3.78130472591233,2.26057226753573,2.72145996605311,2.94661556655154,2.81105173679186,4.39795730256327,0.215567992932842,1.51284864134255,2.11141348996739,0.657587197282725,1.11218899690239,0,0.411564272815887,1.59227413454795,0,0,0,4.34964122324554,2.81431271977315,1.80062061461015,1.65721314909647,0.393528463494808,0.308534225774757,0,0.268273401399619,0,0,0,0,0,0,0.134206418760372,7.57043814830858,8.84979666461846,0,0,2.13288250535234,3.0190767341857,1.15980715189884,0.403367049246685,0.667134131534611,0.951128130562796,0,0.988193728344065,1.00534083520108,0.198956472041151,0.38992817423824,0,0,0,0.379335801906163,0.571242563048644,3.38123207019241,0.407302655690628,0,0.350679099451593,0.189709611372772,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,1.32643988239339,0.977789858652155,0.848725428875941,0.938760993154008,1.50755631697634,1.6663054862021,0.780534591431195,2.04925687338048,2.6575762757853,1.91345722388985,0.81931657357869,1.20879487306127,0.433947175744535,0,0,0,0,15.0917554588524,16.175212749724,0.655739781506702,0.504941854408746,0.631016438832513,0.780877488593277,0.646270193198397,0.477937595905104,0.668396022247182,0.849229592366497,2.42886421004937,1.75353514746787,1.18586333383957,4.17717711348349,0,0.890328018336276,1.14020871547503,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,7.14923172082955,1.26042765821917,0.905510786479282,1.50035924522115,1.06404140185364,2.85390108163313,1.97458824722545,0.608929898229199,0.23467170806371,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,16.6882771809459,0,0.206386867963223,0,0,0,0,0.509935289981566,0,0.138199973804424,0,1.10717597753397,0.813277868507395,0.216010681643603,0.627264888043406,0.436725127492355,0.134864346384821,0.330613822901344,0,0.388844919875379,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,10.7302850097243,6.90487854760765,10.3121192419091,10.1393377582776,8.90607275701835,9.06472676867641,4.05013500139084,13.0593148935024,10.4222754066367,8.28416498802912,0.726511433089237,2.79317411380722,2.56100408631201,2.91728060481953,1.04806581313991,0.919217542250071,2.22246727801615,1.44224540067226,1.92551525755089,1.01078884705519,2.78827229879264,1.69763707247469,1.40462261204824,1.98477972455095,1.95280594449085,1.90517476513229,1.97003354106254,2.12200142510076,2.06042950401653,1.03039244094078,0.685738504770831,1.59728225543404,2.38436189947321,1.59881058295561,1.31753132581463,1.35383372626682,1.82927972872773,1.57841826862706,2.03706170768793,0,2.37270036248348,1.37906275325789,0.818462086339379,1.23949472948773,1.35034627686799,4.24677982494508,1.87145286756327,2.36358159453128,1.53030665655075,1.10295709559758,0.695603506861264
|short_description=p2@Edil3
|short_description=p2@Edil3
}}
}}

Latest revision as of 23:50, 1 October 2015

Short description:p2@Edil3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Edil3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000133761, ENSMUST00000134241_5end
EntrezGene:Edil3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Edil3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F212.26
diencephalon, neonate N30.CNhs11201.1388-42B210.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.72
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E87.57
hippocampus, neonate N00.CNhs11228.627-43G18.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C215.09
medulla oblongata, neonate N30.CNhs11200.1396-42A316.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C916.69
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.85e-1723
neuroblast (sensu Vertebrata)3.85e-1723
neuron6.21e-1233
neuronal stem cell6.21e-1233
neuroblast6.21e-1233
electrically signaling cell6.21e-1233
electrically responsive cell1.10e-0839
electrically active cell1.10e-0839
neural cell1.73e-0843
ectodermal cell4.35e-0844
neurectodermal cell4.35e-0844

Uber anatomy
Ontology termp-valuen
neurectoderm4.29e-3064
neural plate4.29e-3064
presumptive neural plate4.29e-3064
regional part of nervous system1.27e-2954
neural tube1.60e-2752
neural rod1.60e-2752
future spinal cord1.60e-2752
neural keel1.60e-2752
central nervous system3.28e-2773
nervous system3.46e-2775
ectoderm-derived structure8.28e-2695
ectoderm8.28e-2695
presumptive ectoderm8.28e-2695
pre-chordal neural plate1.80e-2549
ecto-epithelium1.04e-2373
brain7.21e-2347
future brain7.21e-2347
regional part of brain3.44e-2246
gray matter5.86e-2234
anterior neural tube1.12e-2040
regional part of forebrain9.05e-2039
forebrain9.05e-2039
future forebrain9.05e-2039
structure with developmental contribution from neural crest5.81e-1892
brain grey matter1.02e-1729
regional part of telencephalon1.02e-1729
telencephalon1.02e-1729
cerebral cortex1.51e-1121
cerebral hemisphere1.51e-1121
pallium1.51e-1121
occipital lobe2.16e-0910
visual cortex2.16e-0910
neocortex2.16e-0910
regional part of cerebral cortex8.33e-0917
tube1.00e-08114
basal ganglion1.43e-078
nuclear complex of neuraxis1.43e-078
aggregate regional part of brain1.43e-078
collection of basal ganglia1.43e-078
cerebral subcortex1.43e-078
posterior neural tube2.61e-0712
chordal neural plate2.61e-0712
anatomical conduit4.56e-07122
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