FFCP PHASE1:Mm9::chr8:41597017..41597110,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18983 | |EntrezGene=18983 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q60809,Q3TLK9,Q3V476 | |UniProt=Q60809,Q3TLK9,Q3V476 | ||
|association_with_transcript=0bp_to_ENSMUST00000034012,ENSMUST00000135269,ENSMUST00000144970,ENSMUST00000146280,uc009lmr.1,uc009lms.1,uc009lmu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000034012,ENSMUST00000135269,ENSMUST00000144970,ENSMUST00000146280,uc009lmr.1,uc009lms.1,uc009lmu.1_5end | ||
|cluster_id=chr8:41597017..41597110,- | |||
|description=CAGE_peak_1_at_Cnot7_5end | |description=CAGE_peak_1_at_Cnot7_5end | ||
|id=chr8:41597017..41597110,- | |id=chr8:41597017..41597110,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.13e-14!63;UBERON:0003056!1.74e-13!49;UBERON:0002346!1.39e-12!71;UBERON:0003075!1.39e-12!71;UBERON:0007284!1.39e-12!71;UBERON:0000955!9.89e-12!50;UBERON:0006238!9.89e-12!50;UBERON:0007811!2.84e-11!86;UBERON:0002616!3.16e-11!49;UBERON:0000153!3.67e-11!94;UBERON:0003080!8.43e-11!40;UBERON:0002791!1.17e-10!29;UBERON:0003528!1.17e-10!29;UBERON:0001893!1.17e-10!29;UBERON:0002780!1.73e-10!39;UBERON:0001890!1.73e-10!39;UBERON:0006240!1.73e-10!39;UBERON:0001049!9.51e-10!52;UBERON:0005068!9.51e-10!52;UBERON:0006241!9.51e-10!52;UBERON:0007135!9.51e-10!52;UBERON:0000956!1.89e-09!21;UBERON:0001869!1.89e-09!21;UBERON:0000203!1.89e-09!21;UBERON:0002020!3.72e-09!34;UBERON:0004121!2.88e-08!102;UBERON:0000924!2.88e-08!102;UBERON:0006601!2.88e-08!102;UBERON:0002619!7.57e-08!17;UBERON:0002021!3.34e-07!10;UBERON:0000411!3.34e-07!10;UBERON:0001950!3.34e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.34e-16,92;UBERON:0003056,1.74e-13,49;UBERON:0002346,2.74e-11,64;UBERON:0003075,2.74e-11,64;UBERON:0007284,2.74e-11,64;UBERON:0010371,6.38e-11,73;UBERON:0000955,7.58e-11,47;UBERON:0006238,7.58e-11,47;UBERON:0003080,8.43e-11,40;UBERON:0003528,1.17e-10,29;UBERON:0002791,1.17e-10,29;UBERON:0001893,1.17e-10,29;UBERON:0002780,1.73e-10,39;UBERON:0001890,1.73e-10,39;UBERON:0006240,1.73e-10,39;UBERON:0002616,2.37e-10,46;UBERON:0000073,3.21e-10,54;UBERON:0001049,9.51e-10,52;UBERON:0005068,9.51e-10,52;UBERON:0006241,9.51e-10,52;UBERON:0007135,9.51e-10,52;UBERON:0000956,1.89e-09,21;UBERON:0001869,1.89e-09,21;UBERON:0000203,1.89e-09,21;UBERON:0002020,3.72e-09,34;UBERON:0002619,7.57e-08,17;UBERON:0002021,3.34e-07,10;UBERON:0000411,3.34e-07,10;UBERON:0001950,3.34e-07,10;UBERON:0004121,4.10e-07,95;UBERON:0000924,4.10e-07,95;UBERON:0006601,4.10e-07,95 | |||
|phase1_expression=44.8416771893423,46.413729216035,43.6799269813955,57.4682001482977,61.1092790534544,35.2546471014969,38.5460856982617,24.2751848070163,62.7917700796434,66.7083900017681,51.536608435877,50.8148652800293,32.0145364971355,29.5480960176211,27.9812199925157,22.4747546802707,24.4846657344851,24.1328556499052,23.7207970137928,25.8877687596798,50.7708442201887,49.1490208444382,45.9711628884526,39.5181284299714,37.3937128139487,49.3839489138917,40.491627638953,39.6467068142036,41.9951756998586,53.1783573793454,40.7984139605761,11.4305521222734,14.7615549020297,31.6963362030877,32.0625297923915,33.413163717057,32.2587582894543,58.5944283031671,66.413504284523,56.0170406051964,53.5290654108223,58.0588662214679,56.804711304645,25.1793635951155,25.5469866673177,26.2471855591205,21.9069576417451,30.741547049643,38.2253957957981,40.4414190074509,21.6978953519312,20.125359011096,39.2611298175103,39.8949178106239,45.7087566833751,40.3897314576437,28.0802771139982,45.8948162126924,44.7119378499711,41.7902873624906,42.466704034914,16.9422266034566,13.3394219416671,29.2467408116455,22.7439263390404,20.6039233334369,27.5632101676932,30.7374644257244,53.192771114249,49.8171912443939,51.9502654537914,38.2772319101097,36.4433092570162,52.7935344616452,52.71500906003,44.122501757281,48.450987639731,58.0977388287604,48.8468775754854,41.0166354840903,41.2609272646868,44.7985498678814,40.2023518561989,52.8996853429779,50.5762200141241,38.0070875261031,42.2843891973336,44.3630681064215,38.4689062132575,33.1003433267721,25.7979394944493,30.1148356943485,59.1575060325743,46.9541776724901,24.6915038630114,35.8421509677868,42.6951037200526,40.2215561284216,37.1493986582102,28.9738451098479,51.8303784778184,32.0816193535795,28.028576367731,49.7746692207332,36.8034769719064,42.8178172652917,44.9916756063157,46.1302874065002,62.6629678426156,57.4471078180872,39.9016251562112,40.4939086155148,44.9700219649314,52.4514789123127,53.0325069182029,48.3816376619251,31.6409558699999,50.8989736358089,30.0767587662957,40.6034793367997,35.334642953663,30.0622656943838,35.4144346314432,55.3355706351824,52.7805701169907,33.2094171771169,38.5804700909063,32.9946502046374,32.2758376765584,50.6292361188301,83.26510971299,65.4659174508024,82.3927277711391,81.8289463457058,55.271619852843,69.1147780668648,37.680564624617,41.5519281837711,63.686135125286,54.0835569628238,49.3156478828647,48.5093440354628,50.0572720858871,42.9508730831788,60.8926667404384,58.1636290093218,48.724896771059,51.9993775185421,41.8201906289714,48.9784747634652,38.3573450677409,36.1672958505498,38.3705203931325,39.0042426504827,42.3911201000364,49.5595324378048,43.5372176134206,39.3742297885514,38.0779089190094,44.7391668676684,49.0159465360491,49.8771910247011,49.9531392084794,50.3716433273354,47.3600036564251,48.5995944528352,46.9478452449334,47.523494343438,49.6970746738711,43.8327129091184,49.7762490611554,46.637795988681,49.1792258251953,50.0589941976187,75.4940915345217,57.3178690952614,35.6852285622502,50.510058232737,44.1506678607934,39.0157608725537,49.4851051476838,42.3535401709019,40.9175600674561,37.2842227180616,35.1151505542939,40.1865449526587,37.4489461112402,38.9954685200656,38.992817423824,31.4586793028978,34.5820879799511,35.6462879125317,41.9166061106311,44.671168430404,63.116331976925,48.0617133714942,37.820734997687,48.6041231839908,43.0640817816192,38.8214689186354,40.191674327392,38.8701066353672,38.5388415213294,37.0396134689729,32.4322341936785,31.4806957338795,33.87764027188,33.2824480458335,28.518095399519,23.0156909960649,33.0755862621072,30.476316863877,24.4405951096503,30.5155577088173,34.0121063694871,39.4023049597494,34.2649059826852,30.8763853672555,37.6896507939874,43.393533295441,55.4080919902888,44.6429575588745,42.4789349402189,43.5516269348721,34.0402406467,40.5877987544222,39.2511508824416,32.1123799990724,41.1393303136317,34.9028860344522,37.8180110286311,36.1622646453779,24.1266054302836,29.914812610029,45.2423131177513,43.322069169843,50.5734358461545,47.8223681296189,38.6886471088954,54.2812493489402,38.8075109881996,32.7968545209176,38.3453647964382,26.7645053706858,32.3058077419471,42.178403087536,31.1704240289669,38.8700291022045,32.8088855695615,61.3723714365651,57.4857345093488,27.9562997757591,45.1196877409406,35.6335465620677,35.84118735179,38.844901784797,38.3950917345234,37.7210159511796,27.7583779307926,43.0409207121498,41.6069552000836,39.6251765130481,37.075727352011,34.1319698570681,28.4630243152497,33.0033738394198,57.874732978144,51.8575950810173,28.8469864835543,45.225114391666,50.1872861207634,34.9602882500058,47.554666954013,29.8375650132307,34.4967410853654,45.5438952357213,42.1209240284977,34.9558856235938,47.793470301988,43.9681222726256,37.4829160169849,32.171616350032,34.3947387223224,55.2567399991319,29.2189206164328,26.4175190992925,36.1129328370938,26.5599524376614,26.5186801778789,28.5972716508153,63.2319759577142,55.9805809294632,64.6775877404703,49.6428721367859,52.1954389408873,43.5103659651456,42.9861256470769,43.699453867024,43.2357876217432,37.7620169877498,42.7318366099987,37.6928556457003,31.7556684564893,44.1150912291717,81.7354761092076,49.190943648469,38.8827452574179,46.6682852025714,37.3271889850643,48.9972763923257,56.8009035045449,66.6646450401025,71.9335102760376,68.8514744354117,67.6870514705984,34.7612232690996,34.2605613840378,38.8247418083047,37.8069594865383,39.7439264381809,44.1072607614408,38.46254384639,39.137724701263,38.0643516304517,43.4378797933499,41.2379097209678,37.4238262040649,40.89003269714,38.6862546220993,38.0907044473555,38.1815839803391,42.7935096027199,36.2630771346409,34.1945581436977,31.9060208267009,35.3482634835822,35.799519306204,33.6053309703693,60.4284471600261,57.0803293268899,57.8624468573791,67.3664474787255,78.7844897736239,67.985450765073,64.1271375220216,69.3494652965299,73.4090702554411,59.5424358514593,56.8754664761288,54.6664076559413,40.1223973522215,42.0574620528149,44.8572168023882,37.1363887069029,39.7821642764891,32.7595741009842,37.2266283126506,34.3668207998765,35.4871019846336,37.159389253057,35.3964898236156,39.7596196434238,39.6879090483288,31.9116773159659,39.4006708212509,40.8967547383055,44.0931913859538,34.8861440718522,30.8582327146874,33.3654515579554,41.0110246709392,38.0807611576701,40.2788148177615,37.9073443354711,38.4148743032822,38.6712475813629,36.9387189660744,39.2799590160417,37.7259357634874,39.3032884678498,34.7846386694236,39.0440839788634,31.0579643679638,32.7251857098709,36.4933309174837,35.8834660260658,41.8921447230767,34.1916699635249,41.5043425760554 | |phase1_expression=44.8416771893423,46.413729216035,43.6799269813955,57.4682001482977,61.1092790534544,35.2546471014969,38.5460856982617,24.2751848070163,62.7917700796434,66.7083900017681,51.536608435877,50.8148652800293,32.0145364971355,29.5480960176211,27.9812199925157,22.4747546802707,24.4846657344851,24.1328556499052,23.7207970137928,25.8877687596798,50.7708442201887,49.1490208444382,45.9711628884526,39.5181284299714,37.3937128139487,49.3839489138917,40.491627638953,39.6467068142036,41.9951756998586,53.1783573793454,40.7984139605761,11.4305521222734,14.7615549020297,31.6963362030877,32.0625297923915,33.413163717057,32.2587582894543,58.5944283031671,66.413504284523,56.0170406051964,53.5290654108223,58.0588662214679,56.804711304645,25.1793635951155,25.5469866673177,26.2471855591205,21.9069576417451,30.741547049643,38.2253957957981,40.4414190074509,21.6978953519312,20.125359011096,39.2611298175103,39.8949178106239,45.7087566833751,40.3897314576437,28.0802771139982,45.8948162126924,44.7119378499711,41.7902873624906,42.466704034914,16.9422266034566,13.3394219416671,29.2467408116455,22.7439263390404,20.6039233334369,27.5632101676932,30.7374644257244,53.192771114249,49.8171912443939,51.9502654537914,38.2772319101097,36.4433092570162,52.7935344616452,52.71500906003,44.122501757281,48.450987639731,58.0977388287604,48.8468775754854,41.0166354840903,41.2609272646868,44.7985498678814,40.2023518561989,52.8996853429779,50.5762200141241,38.0070875261031,42.2843891973336,44.3630681064215,38.4689062132575,33.1003433267721,25.7979394944493,30.1148356943485,59.1575060325743,46.9541776724901,24.6915038630114,35.8421509677868,42.6951037200526,40.2215561284216,37.1493986582102,28.9738451098479,51.8303784778184,32.0816193535795,28.028576367731,49.7746692207332,36.8034769719064,42.8178172652917,44.9916756063157,46.1302874065002,62.6629678426156,57.4471078180872,39.9016251562112,40.4939086155148,44.9700219649314,52.4514789123127,53.0325069182029,48.3816376619251,31.6409558699999,50.8989736358089,30.0767587662957,40.6034793367997,35.334642953663,30.0622656943838,35.4144346314432,55.3355706351824,52.7805701169907,33.2094171771169,38.5804700909063,32.9946502046374,32.2758376765584,50.6292361188301,83.26510971299,65.4659174508024,82.3927277711391,81.8289463457058,55.271619852843,69.1147780668648,37.680564624617,41.5519281837711,63.686135125286,54.0835569628238,49.3156478828647,48.5093440354628,50.0572720858871,42.9508730831788,60.8926667404384,58.1636290093218,48.724896771059,51.9993775185421,41.8201906289714,48.9784747634652,38.3573450677409,36.1672958505498,38.3705203931325,39.0042426504827,42.3911201000364,49.5595324378048,43.5372176134206,39.3742297885514,38.0779089190094,44.7391668676684,49.0159465360491,49.8771910247011,49.9531392084794,50.3716433273354,47.3600036564251,48.5995944528352,46.9478452449334,47.523494343438,49.6970746738711,43.8327129091184,49.7762490611554,46.637795988681,49.1792258251953,50.0589941976187,75.4940915345217,57.3178690952614,35.6852285622502,50.510058232737,44.1506678607934,39.0157608725537,49.4851051476838,42.3535401709019,40.9175600674561,37.2842227180616,35.1151505542939,40.1865449526587,37.4489461112402,38.9954685200656,38.992817423824,31.4586793028978,34.5820879799511,35.6462879125317,41.9166061106311,44.671168430404,63.116331976925,48.0617133714942,37.820734997687,48.6041231839908,43.0640817816192,38.8214689186354,40.191674327392,38.8701066353672,38.5388415213294,37.0396134689729,32.4322341936785,31.4806957338795,33.87764027188,33.2824480458335,28.518095399519,23.0156909960649,33.0755862621072,30.476316863877,24.4405951096503,30.5155577088173,34.0121063694871,39.4023049597494,34.2649059826852,30.8763853672555,37.6896507939874,43.393533295441,55.4080919902888,44.6429575588745,42.4789349402189,43.5516269348721,34.0402406467,40.5877987544222,39.2511508824416,32.1123799990724,41.1393303136317,34.9028860344522,37.8180110286311,36.1622646453779,24.1266054302836,29.914812610029,45.2423131177513,43.322069169843,50.5734358461545,47.8223681296189,38.6886471088954,54.2812493489402,38.8075109881996,32.7968545209176,38.3453647964382,26.7645053706858,32.3058077419471,42.178403087536,31.1704240289669,38.8700291022045,32.8088855695615,61.3723714365651,57.4857345093488,27.9562997757591,45.1196877409406,35.6335465620677,35.84118735179,38.844901784797,38.3950917345234,37.7210159511796,27.7583779307926,43.0409207121498,41.6069552000836,39.6251765130481,37.075727352011,34.1319698570681,28.4630243152497,33.0033738394198,57.874732978144,51.8575950810173,28.8469864835543,45.225114391666,50.1872861207634,34.9602882500058,47.554666954013,29.8375650132307,34.4967410853654,45.5438952357213,42.1209240284977,34.9558856235938,47.793470301988,43.9681222726256,37.4829160169849,32.171616350032,34.3947387223224,55.2567399991319,29.2189206164328,26.4175190992925,36.1129328370938,26.5599524376614,26.5186801778789,28.5972716508153,63.2319759577142,55.9805809294632,64.6775877404703,49.6428721367859,52.1954389408873,43.5103659651456,42.9861256470769,43.699453867024,43.2357876217432,37.7620169877498,42.7318366099987,37.6928556457003,31.7556684564893,44.1150912291717,81.7354761092076,49.190943648469,38.8827452574179,46.6682852025714,37.3271889850643,48.9972763923257,56.8009035045449,66.6646450401025,71.9335102760376,68.8514744354117,67.6870514705984,34.7612232690996,34.2605613840378,38.8247418083047,37.8069594865383,39.7439264381809,44.1072607614408,38.46254384639,39.137724701263,38.0643516304517,43.4378797933499,41.2379097209678,37.4238262040649,40.89003269714,38.6862546220993,38.0907044473555,38.1815839803391,42.7935096027199,36.2630771346409,34.1945581436977,31.9060208267009,35.3482634835822,35.799519306204,33.6053309703693,60.4284471600261,57.0803293268899,57.8624468573791,67.3664474787255,78.7844897736239,67.985450765073,64.1271375220216,69.3494652965299,73.4090702554411,59.5424358514593,56.8754664761288,54.6664076559413,40.1223973522215,42.0574620528149,44.8572168023882,37.1363887069029,39.7821642764891,32.7595741009842,37.2266283126506,34.3668207998765,35.4871019846336,37.159389253057,35.3964898236156,39.7596196434238,39.6879090483288,31.9116773159659,39.4006708212509,40.8967547383055,44.0931913859538,34.8861440718522,30.8582327146874,33.3654515579554,41.0110246709392,38.0807611576701,40.2788148177615,37.9073443354711,38.4148743032822,38.6712475813629,36.9387189660744,39.2799590160417,37.7259357634874,39.3032884678498,34.7846386694236,39.0440839788634,31.0579643679638,32.7251857098709,36.4933309174837,35.8834660260658,41.8921447230767,34.1916699635249,41.5043425760554 | ||
|short_description=p1@Cnot7 | |short_description=p1@Cnot7 | ||
}} | }} |
Latest revision as of 23:44, 1 October 2015
Short description: | p1@Cnot7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cnot7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000034012, ENSMUST00000135269, ENSMUST00000144970, ENSMUST00000146280, uc009lmr.1, uc009lms.1, uc009lmu.1_5end |
EntrezGene: | Cnot7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.34e-16 | 92 |
pre-chordal neural plate | 1.74e-13 | 49 |
neurectoderm | 2.74e-11 | 64 |
neural plate | 2.74e-11 | 64 |
presumptive neural plate | 2.74e-11 | 64 |
ecto-epithelium | 6.38e-11 | 73 |
brain | 7.58e-11 | 47 |
future brain | 7.58e-11 | 47 |
anterior neural tube | 8.43e-11 | 40 |
brain grey matter | 1.17e-10 | 29 |
regional part of telencephalon | 1.17e-10 | 29 |
telencephalon | 1.17e-10 | 29 |
regional part of forebrain | 1.73e-10 | 39 |
forebrain | 1.73e-10 | 39 |
future forebrain | 1.73e-10 | 39 |
regional part of brain | 2.37e-10 | 46 |
regional part of nervous system | 3.21e-10 | 54 |
neural tube | 9.51e-10 | 52 |
neural rod | 9.51e-10 | 52 |
future spinal cord | 9.51e-10 | 52 |
neural keel | 9.51e-10 | 52 |
cerebral cortex | 1.89e-09 | 21 |
cerebral hemisphere | 1.89e-09 | 21 |
pallium | 1.89e-09 | 21 |
gray matter | 3.72e-09 | 34 |
regional part of cerebral cortex | 7.57e-08 | 17 |
occipital lobe | 3.34e-07 | 10 |
visual cortex | 3.34e-07 | 10 |
neocortex | 3.34e-07 | 10 |
ectoderm-derived structure | 4.10e-07 | 95 |
ectoderm | 4.10e-07 | 95 |
presumptive ectoderm | 4.10e-07 | 95 |