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FFCP PHASE1:Mm9::chr11:68903270..68903314,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:68903270..68903314,+
|DHSsupport=NA
|short_description=p2@Vamp2
|DPIdataset=NA
|description=CAGE_peak_2_at_Vamp2_5end
|association_with_transcript=162bp_to_ENSMUST00000146847_5end
|EntrezGene=22318
|EntrezGene=22318
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=162bp_to_ENSMUST00000146847_5end
|cluster_id=chr11:68903270..68903314,+
|description=CAGE_peak_2_at_Vamp2_5end
|id=chr11:68903270..68903314,+
|ontology_enrichment_celltype=CL:0000117!3.55e-12!23;CL:0000337!3.55e-12!23;CL:0000540!5.62e-09!33;CL:0000047!5.62e-09!33;CL:0000031!5.62e-09!33;CL:0000404!5.62e-09!33;CL:0002319!1.13e-08!43;CL:0000221!2.50e-08!44;CL:0000133!2.50e-08!44;CL:0000393!2.73e-07!39;CL:0000211!2.73e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.33e-13,23;CL:0000337,3.33e-13,23;CL:0000540,1.14e-09,33;CL:0000047,1.14e-09,33;CL:0000031,1.14e-09,33;CL:0000404,1.14e-09,33;CL:0002319,2.84e-09,43;CL:0000221,1.02e-08,44;CL:0000133,1.02e-08,44;CL:0000393,1.63e-07,39;CL:0000211,1.63e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.75e-25!73;UBERON:0005743!5.75e-25!73;UBERON:0001049!1.53e-24!52;UBERON:0005068!1.53e-24!52;UBERON:0006241!1.53e-24!52;UBERON:0007135!1.53e-24!52;UBERON:0000033!3.75e-24!63;UBERON:0000073!5.72e-24!75;UBERON:0001016!5.72e-24!75;UBERON:0000955!7.08e-24!50;UBERON:0006238!7.08e-24!50;UBERON:0004121!2.32e-23!102;UBERON:0000924!2.32e-23!102;UBERON:0006601!2.32e-23!102;UBERON:0002616!4.17e-23!49;UBERON:0002346!4.65e-22!71;UBERON:0003075!4.65e-22!71;UBERON:0007284!4.65e-22!71;UBERON:0002020!5.80e-19!34;UBERON:0003056!2.32e-18!49;UBERON:0003080!2.64e-18!40;UBERON:0002780!1.14e-17!39;UBERON:0001890!1.14e-17!39;UBERON:0006240!1.14e-17!39;UBERON:0002791!2.81e-16!29;UBERON:0003528!2.81e-16!29;UBERON:0001893!2.81e-16!29;UBERON:0000956!2.68e-12!21;UBERON:0001869!2.68e-12!21;UBERON:0000203!2.68e-12!21;UBERON:0004111!4.80e-12!122;UBERON:0007811!4.93e-12!86;UBERON:0000025!2.27e-11!114;UBERON:0000153!8.50e-11!94;UBERON:0002619!1.55e-10!17;UBERON:0002021!5.73e-08!10;UBERON:0000411!5.73e-08!10;UBERON:0001950!5.73e-08!10;UBERON:0003076!7.91e-07!12;UBERON:0003057!7.91e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.12e-28,54;UBERON:0001017,4.26e-27,73;UBERON:0001049,9.00e-27,52;UBERON:0005068,9.00e-27,52;UBERON:0006241,9.00e-27,52;UBERON:0007135,9.00e-27,52;UBERON:0001016,5.12e-26,75;UBERON:0004121,5.52e-26,95;UBERON:0000924,5.52e-26,95;UBERON:0006601,5.52e-26,95;UBERON:0002346,5.98e-26,64;UBERON:0003075,5.98e-26,64;UBERON:0007284,5.98e-26,64;UBERON:0010314,7.78e-26,92;UBERON:0000955,8.49e-24,47;UBERON:0006238,8.49e-24,47;UBERON:0002616,5.72e-23,46;UBERON:0010371,8.01e-23,73;UBERON:0002020,1.19e-20,34;UBERON:0003056,4.79e-20,49;UBERON:0003080,6.31e-20,40;UBERON:0002780,3.13e-19,39;UBERON:0001890,3.13e-19,39;UBERON:0006240,3.13e-19,39;UBERON:0003528,1.06e-17,29;UBERON:0002791,1.06e-17,29;UBERON:0001893,1.06e-17,29;UBERON:0000956,2.45e-13,21;UBERON:0001869,2.45e-13,21;UBERON:0000203,2.45e-13,21;UBERON:0004111,5.12e-13,122;UBERON:0000025,1.19e-12,114;UBERON:0002619,2.09e-11,17;UBERON:0002021,1.37e-08,10;UBERON:0000411,1.37e-08,10;UBERON:0001950,1.37e-08,10;UBERON:0003076,2.43e-07,12;UBERON:0003057,2.43e-07,12
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|phase1_expression=1.28119077683835,0,0.454999239389536,0,0,0,0,0.516493293766305,1.267098499365,0.936258105287974,0.856089841127525,0.159544317990673,0.171200729931206,0.174840804837995,0.666219523631325,0.202475267389826,0.699561878128147,0.157731082679119,0.274228867211478,0.42438965179803,4.93251082876205,0.297872853602656,0,0.47997726838022,0.22940928106717,0.57423196411502,0,0.215471232685889,0.950117097281869,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0,0.683045484958446,0,1.25896817975577,0.709638518536602,0.183546752161682,2.34717403304412,1.96222640742402,3.07560655828261,2.13872888981712,0.979904951377538,0,0.671130424230945,1.45072428402269,0.672187598284928,1.54355661621568,0.85960031981627,1.03134418455488,5.86717736492834,7.40587370980846,10.1413024560989,0.677689064138264,0,1.7997994345628,0.988866362566974,2.1314403448383,2.39680088414724,4.2264013585371,3.7328260431052,3.24014251996058,3.36519938162211,7.42692559449889,6.84692476950002,3.06226998037385,3.64212789869298,6.43453150627015,15.4162233399144,20.8130361078856,21.9657342556428,5.53922408466814,6.12967212136145,2.6045668527838,15.9134309430787,7.87867654044352,12.9878510610289,14.4368006882097,8.68467252874528,6.33758115806022,0.454357159999104,1.20914496170857,0.579728977403356,0,0,0.539703191637817,1.29955283489534,0,1.82577746171277,2.89731548382698,1.55871602761721,1.41335829804136,0.704217098883403,1.28326477414318,0,0,0,0.506719730950197,0.505524445014783,2.2836775943812,0.517875767294343,1.7813056687779,0.346970653532272,1.21786191324856,0.922461989024234,0.753613202763113,2.23418543557839,1.63366568728578,1.97755974187499,3.47038456607788,0.884610551949874,2.10296904931632,1.32504911076236,0.969750506270444,0,20.4946557908083,11.7290155815535,0.766371165625774,0.239630249011841,0.599902730993408,0.254140454146129,19.0234112044125,16.9275223042892,7.16229807043327,31.6360262749943,19.1786592997748,19.9476522777178,14.4394724130304,1.32391173005411,0.622034853050465,1.76905930903572,5.6819301089348,0.390361328888111,0.459804208866946,1.0803727788321,2.56198190320716,2.78949646520444,3.07472928683639,2.24884138943349,9.31332134660456,1.29340795759705,1.13463648100692,0.703804496655795,0.657587197282725,0.834141747676794,0.696504333044333,2.46938563689532,0.199034266818493,0,0,0,2.69263504296152,1.64168241986767,1.80062061461015,2.60419209143731,2.75469924446365,1.07986979021165,2.55787339225449,1.3413670069981,1.40118410840603,1.97471819896177,2.79084688934462,2.83740833410495,3.65499968563331,2.63460138349261,1.47627060636409,23.9730541363105,7.10041825417063,0.330418782983798,0.793351699990633,0.426576501070468,0,0.515469845288373,0.403367049246685,0.889512175379481,1.52180500890047,0.474529061544512,2.30578536613615,1.25667604400135,1.59165177632921,0.974820435595601,0.898819408654221,0.648414149624083,0.796565093017469,1.89667900953082,0.571242563048644,0,0.814605311381257,1.35766741017338,1.19230893813542,1.3279672796094,2.21415221969403,2.04098346193787,1.60416313098341,0.592905254174298,0.667380422864376,0.393117990226406,0.674586337154561,0.608580364165509,0.482354319504834,0.50925170356284,0.287696137450811,0.486405680325106,0.274561413188081,0,1.11642284300551,0.312037673114561,0.252578877947112,0.179397413521912,0,2.95605104266567,0.37898282354097,1.30371981153621,0.509235257325564,0.704070744865506,1.00503754465089,2.85652369063216,0.390267295715598,1.41871629695572,1.55025282754142,1.43509291791738,1.63863314715738,1.03610989119537,1.01254341007058,0,0.54390568381871,1.96705709207614,1.10374698521893,10.2752377592187,13.0104972117346,1.3114795630134,1.00988370881749,0.315508219416257,1.17131623288992,2.15423397732799,0.716906393857656,0.222798674082394,1.13230612315533,1.21443210502468,1.46127928955656,2.37172666767914,35.9879874392424,0.851640511249612,0,0.325773918707152,2.14461159864296,0,1.45668381692989,0.906970670894253,0.943025398779491,1.47650946440386,1.84461088766356,0.775284879504663,0.727067458955011,2.13898427030833,1.26414703174326,0,0,6.46835250932197,1.08036656418786,1.16422815404479,1.28602221018955,2.12808280370728,1.96205699362278,2.30368628842969,4.87143918583359,1.64270195644597,2.54198485036584,2.42581237860458,1.6488625294148,1.29171541356724,1.20625849856312,0.477489376012546,0.656563598980245,0,9.82754100655701,0.170870880797853,0.206386867963223,1.29636169158798,0.941842285023455,0.683471138605126,0.457556346413045,0,0.139951452323658,0,3.81868247206045,0.790839983952838,1.21991680276109,0.86404272657441,0.836353184057875,0.436725127492355,0.809186078308924,1.73572257023205,0.785267825952089,1.03691978633434,5.59205381778233,2.25477175473676,0.299033092087958,0.496375471371293,1.36115831840833,0.516639293910924,1.18269287843545,1.17357238645754,0.5208175393758,0.524296722128554,0.966336483304024,0.576060012515731,0.632022241256357,0.405450430580328,0.410843828659309,0.129920822977795,1.07416017400489,0.993406773906324,1.08175904567972,0,0.706765149637033,0.228620419965,0.504130925684203,0.487289403698762,0.769694733122636,0.935015217452552,4.0811469050738,0,0.448569283047378,0.167884616364078,1.15913756419314,1.68914227906064,1.46521299413812,0.857473516316263,1.50471631210609,35.5793660848752,28.0798394269378,32.6550442660456,23.3720327987415,19.8673930733486,26.4387864086395,22.2757425076496,34.674732648265,14.5005570874945,23.8169743405837,0.518936737920883,1.59609949360412,1.02440163452481,1.94485373654635,2.51535795153579,1.65459157605013,1.77797382241292,1.23621034343337,3.20919209591815,2.02157769411038,2.02783439912192,2.64076877940507,1.21733959710847,2.36893063898016,1.83793500657962,3.81034953026459,1.62238056322798,1.35036454324594,2.47251540481984,1.91358596174717,2.05721551431249,1.4198064492747,0.715308569841963,2.0348498328526,2.25862512996793,1.26921911837515,1.09756783723664,1.57841826862706,1.62964936615034,2.24456908663095,1.54225523561426,1.37906275325789,1.63692417267876,1.54936841185966,3.47231899766054,5.74564329257276,2.57324769289949,3.22306581072447,2.67803664896381,1.76473135295612,2.55054619182464
|short_description=p2@Vamp2
}}
}}

Latest revision as of 23:42, 1 October 2015

Short description:p2@Vamp2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Vamp2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 162bp_to_ENSMUST00000146847_5end
EntrezGene:Vamp2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Vamp2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.08
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.97
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.44
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.34
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.28
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B220.49
cerebellum, neonate N30.CNhs11135.1395-42I211.73
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A419.02
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D531.64
cortex, neonate N30.CNhs11107.1392-42F219.18
diencephalon, adult.CNhs10482.20-12F219.95
diencephalon, neonate N30.CNhs11201.1388-42B214.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G45.68
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A29.31
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E823.97
hippocampus, neonate N00.CNhs11228.627-43G17.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C210.28
medulla oblongata, neonate N30.CNhs11200.1396-42A313.01
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I935.99
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.83
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.08
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.82
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.33e-1323
neuroblast (sensu Vertebrata)3.33e-1323
neuron1.14e-0933
neuronal stem cell1.14e-0933
neuroblast1.14e-0933
electrically signaling cell1.14e-0933
neural cell2.84e-0943
ectodermal cell1.02e-0844
neurectodermal cell1.02e-0844
electrically responsive cell1.63e-0739
electrically active cell1.63e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.12e-2854
central nervous system4.26e-2773
neural tube9.00e-2752
neural rod9.00e-2752
future spinal cord9.00e-2752
neural keel9.00e-2752
nervous system5.12e-2675
ectoderm-derived structure5.52e-2695
ectoderm5.52e-2695
presumptive ectoderm5.52e-2695
neurectoderm5.98e-2664
neural plate5.98e-2664
presumptive neural plate5.98e-2664
structure with developmental contribution from neural crest7.78e-2692
brain8.49e-2447
future brain8.49e-2447
regional part of brain5.72e-2346
ecto-epithelium8.01e-2373
gray matter1.19e-2034
pre-chordal neural plate4.79e-2049
anterior neural tube6.31e-2040
regional part of forebrain3.13e-1939
forebrain3.13e-1939
future forebrain3.13e-1939
brain grey matter1.06e-1729
regional part of telencephalon1.06e-1729
telencephalon1.06e-1729
cerebral cortex2.45e-1321
cerebral hemisphere2.45e-1321
pallium2.45e-1321
anatomical conduit5.12e-13122
tube1.19e-12114
regional part of cerebral cortex2.09e-1117
occipital lobe1.37e-0810
visual cortex1.37e-0810
neocortex1.37e-0810
posterior neural tube2.43e-0712
chordal neural plate2.43e-0712
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