FFCP PHASE1:Mm9::chr16:37868423..37868461,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:37868423..37868461,+ to FFCP PHASE1:Mm9::chr16:37868423..37868461,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=320184 | |EntrezGene=320184 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UGP9,Q8BTI3 | |UniProt=Q3UGP9,Q8BTI3 | ||
|association_with_transcript=-13bp_to_ENSMUST00000078717,ENSMUST00000171099_5end | |||
|cluster_id=chr16:37868423..37868461,+ | |||
|description=CAGE_peak_2_at_Lrrc58_5end | |||
|id=chr16:37868423..37868461,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.87e-15!50;CL:0000221!3.21e-14!44;CL:0000133!3.21e-14!44;CL:0002319!7.28e-14!43;CL:0000393!3.38e-11!39;CL:0000211!3.38e-11!39;CL:0000540!1.89e-09!33;CL:0000047!1.89e-09!33;CL:0000031!1.89e-09!33;CL:0000404!1.89e-09!33;CL:0002321!5.96e-08!70;CL:0000220!5.96e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.21e-14,44;CL:0000133,3.21e-14,44;CL:0002319,7.28e-14,43;CL:0000393,3.38e-11,39;CL:0000211,3.38e-11,39;CL:0000540,1.89e-09,33;CL:0000047,1.89e-09,33;CL:0000031,1.89e-09,33;CL:0000404,1.89e-09,33;CL:0002321,5.96e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.19e-10!102;UBERON:0000924!4.19e-10!102;UBERON:0006601!4.19e-10!102;UBERON:0000073!1.75e-07!75;UBERON:0001016!1.75e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.39e-09,95;UBERON:0000924,3.39e-09,95;UBERON:0006601,3.39e-09,95;UBERON:0001016,1.75e-07,75 | |||
|phase1_expression=10.890121603126,2.09385244583617,4.09499315450582,2.11724947914781,2.50447864973174,5.37213670118047,5.37309073369709,2.96983643915625,5.34997144176334,2.10658073689794,3.93801326918661,5.74359544766422,3.25281386869291,3.3219752919219,2.6648780945253,3.64455481301687,3.49780939064073,1.89277299214943,2.19383093769182,2.12194825899015,9.35476191661768,6.7517846816602,4.96279599363977,2.07990149631429,2.75291137280604,3.44539178469012,2.58457197695445,2.15471232685889,2.28028103347649,2.52030129759931,3.54768817048488,1.90509202037889,3.69038872550742,0,4.91047753577167,7.31432439577366,5.10423390655923,1.67412652294763,2.3440060335714,3.14114246384279,1.17646297606203,5.46436387966757,0.971020706062307,12.211991343631,12.5707394712198,11.3798986340243,27.3836970521814,23.1106665763273,17.3552084360233,21.970578595394,23.2377459898102,5.75010257459886,2.68452169692378,2.17608642603403,3.36093799142464,21.0952737549477,18.0516067161417,13.4074743992135,10.7227724255587,8.46385566835253,9.50747105259269,14.9091594110418,15.1180115338894,10.3488467487361,6.92206453796882,10.6572017241915,16.4780060785123,16.9056054341484,22.8117147078651,16.8757422914613,22.9254207873006,15.1395021734016,17.4486147351775,13.229006315215,15.7186572469908,11.9498442259303,15.4162233399144,12.7687338085188,14.4390141260869,10.8146755938759,9.60620257825301,10.939180781692,12.0048689570594,9.56696437053856,17.8773949898868,17.6777151284201,16.9422300150933,15.8439528951505,19.6888102666279,19.1951762671235,13.3337664802772,9.46466264679525,14.2793980078628,4.85732872474035,8.4470934268197,7.16843019355737,5.47733238513832,13.9752864514007,14.5480162577607,12.3668851078619,14.084341977668,16.6824420638613,2.54805239706646,28.4426681261332,5.84525810730278,6.33399663687746,5.05524445014783,8.67797485864856,2.84831672011889,11.2816025689267,10.7560902595004,8.52503339273995,9.22461989024234,14.3186508524991,13.9930561491489,20.6093209780668,20.0227923864843,13.8815382643115,4.42305275974937,11.1619126463712,10.1587098491781,6.30337829075789,9.31958806090611,11.7112318804619,7.95897485891129,3.57639877292028,9.22576458695586,4.79922184794726,8.51370521389534,7.78911324905078,7.32000964509802,10.178002521142,6.95297280769106,8.95004100656157,8.72709787150152,7.78758062725237,14.0538322113436,9.45492976636707,9.09801930361229,13.0473950649614,7.80722657776222,9.65588838620586,11.884100567153,11.3028613376786,13.1990808353576,9.60852902136373,11.2442069471675,6.46758426847539,14.4430555265004,14.1829560125864,15.1317966780996,12.0557652835166,10.8438427197983,12.1888258282758,11.9353639116607,14.927570011387,2.80885274925294,6.17634977075316,6.53576048609863,9.73491130916859,8.67746421930056,9.54328925743379,7.33908680314152,9.44468312387538,8.79322543458056,8.8362899005155,11.267482858784,12.9609530027558,11.8483091937706,12.9692296622485,14.6734545277999,9.5029991826466,11.1970558798436,7.38135303182045,12.1968170167194,18.3170210035126,0.991256348951394,4.23120906661671,10.024547775156,9.98617688999886,11.8558064416326,11.0925938542838,10.4517680607089,9.51128130562796,13.2868137232463,8.23494773620054,10.5560787696113,10.544693018181,9.35827618171777,10.7858329038507,7.13255564586491,6.17337947088538,12.3284135619503,13.1385789501188,14.6520056375005,10.997171703647,10.6673867942194,15.9909669349926,17.1371015606737,11.9564219863478,10.8329122210549,9.13139013021324,8.30067355844017,5.6727335943472,6.6830058338489,2.9232074610031,5.27436315610108,5.30589751455317,4.83789118384698,4.31544206176216,6.16113861745134,5.76578967694971,7.18841032636773,4.83783231969054,8.7370548472077,7.57736633841335,7.17589654087649,7.71909634181387,9.42241269849684,11.9379589415405,12.548303186036,10.6939404038369,9.15291968325158,10.3853879613926,13.0924002487308,16.5863600679129,12.2955412402829,12.6234873099802,17.2211150150086,10.3233888270915,10.5337838938196,12.5844680965915,1.50791283939272,3.26343410291226,9.34352118736169,12.417153583713,7.86697890940181,8.67366480782304,12.4590558486273,11.3611917241968,13.2513452154828,13.2749173060857,12.2791336707695,17.4447222505363,18.4922899488387,21.2307398091624,17.4068601720205,12.2747460322751,15.0209355619679,8.35435422696698,12.3487874131194,15.8478387263857,17.4289046508326,12.7026994688852,10.619611067197,7.04063844849446,9.06970670894253,4.71512699389745,8.26845300066164,15.9866276930842,11.3708448994017,14.5413491791002,13.9033977570041,9.16506598013866,12.6502330289999,13.4076206222643,8.85142974959849,9.00305470156551,6.85601024048599,10.7168517515796,12.4138163549592,14.0911365905636,18.1003922662333,6.69822888052118,11.4989136951218,12.2862601101016,6.83638033970382,15.6641940294406,13.5630118424561,17.2494965294526,13.8471919043638,14.6085400773105,9.61886760878507,10.5692422145991,4.78438466233988,9.70018279427146,6.11141940320049,3.76736914009382,4.23752105935178,4.80434163733698,5.94924504978494,9.23679585336143,8.43019840206985,0.954670618015114,13.6024477239888,13.62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| |phase1_expression=10.890121603126,2.09385244583617,4.09499315450582,2.11724947914781,2.50447864973174,5.37213670118047,5.37309073369709,2.96983643915625,5.34997144176334,2.10658073689794,3.93801326918661,5.74359544766422,3.25281386869291,3.3219752919219,2.6648780945253,3.64455481301687,3.49780939064073,1.89277299214943,2.19383093769182,2.12194825899015,9.35476191661768,6.7517846816602,4.96279599363977,2.07990149631429,2.75291137280604,3.44539178469012,2.58457197695445,2.15471232685889,2.28028103347649,2.52030129759931,3.54768817048488,1.90509202037889,3.69038872550742,0,4.91047753577167,7.31432439577366,5.10423390655923,1.67412652294763,2.3440060335714,3.14114246384279,1.17646297606203,5.46436387966757,0.971020706062307,12.211991343631,12.5707394712198,11.3798986340243,27.3836970521814,23.1106665763273,17.3552084360233,21.970578595394,23.2377459898102,5.75010257459886,2.68452169692378,2.17608642603403,3.36093799142464,21.0952737549477,18.0516067161417,13.4074743992135,10.7227724255587,8.46385566835253,9.50747105259269,14.9091594110418,15.1180115338894,10.3488467487361,6.92206453796882,10.6572017241915,16.4780060785123,16.9056054341484,22.8117147078651,16.8757422914613,22.9254207873006,15.1395021734016,17.4486147351775,13.229006315215,15.7186572469908,11.9498442259303,15.4162233399144,12.7687338085188,14.4390141260869,10.8146755938759,9.60620257825301,10.939180781692,12.0048689570594,9.56696437053856,17.8773949898868,17.6777151284201,16.9422300150933,15.8439528951505,19.6888102666279,19.1951762671235,13.3337664802772,9.46466264679525,14.2793980078628,4.85732872474035,8.4470934268197,7.16843019355737,5.47733238513832,13.9752864514007,14.5480162577607,12.3668851078619,14.084341977668,16.6824420638613,2.54805239706646,28.4426681261332,5.84525810730278,6.33399663687746,5.05524445014783,8.67797485864856,2.84831672011889,11.2816025689267,10.7560902595004,8.52503339273995,9.22461989024234,14.3186508524991,13.9930561491489,20.6093209780668,20.0227923864843,13.8815382643115,4.42305275974937,11.1619126463712,10.1587098491781,6.30337829075789,9.31958806090611,11.7112318804619,7.95897485891129,3.57639877292028,9.22576458695586,4.79922184794726,8.51370521389534,7.78911324905078,7.32000964509802,10.178002521142,6.95297280769106,8.95004100656157,8.72709787150152,7.78758062725237,14.0538322113436,9.45492976636707,9.09801930361229,13.0473950649614,7.80722657776222,9.65588838620586,11.884100567153,11.3028613376786,13.1990808353576,9.60852902136373,11.2442069471675,6.46758426847539,14.4430555265004,14.1829560125864,15.1317966780996,12.0557652835166,10.8438427197983,12.1888258282758,11.9353639116607,14.927570011387,2.80885274925294,6.17634977075316,6.53576048609863,9.73491130916859,8.67746421930056,9.54328925743379,7.33908680314152,9.44468312387538,8.79322543458056,8.8362899005155,11.267482858784,12.9609530027558,11.8483091937706,12.9692296622485,14.6734545277999,9.5029991826466,11.1970558798436,7.38135303182045,12.1968170167194,18.3170210035126,0.991256348951394,4.23120906661671,10.024547775156,9.98617688999886,11.8558064416326,11.0925938542838,10.4517680607089,9.51128130562796,13.2868137232463,8.23494773620054,10.5560787696113,10.544693018181,9.35827618171777,10.7858329038507,7.13255564586491,6.17337947088538,12.3284135619503,13.1385789501188,14.6520056375005,10.997171703647,10.6673867942194,15.9909669349926,17.1371015606737,11.9564219863478,10.8329122210549,9.13139013021324,8.30067355844017,5.6727335943472,6.6830058338489,2.9232074610031,5.27436315610108,5.30589751455317,4.83789118384698,4.31544206176216,6.16113861745134,5.76578967694971,7.18841032636773,4.83783231969054,8.7370548472077,7.57736633841335,7.17589654087649,7.71909634181387,9.42241269849684,11.9379589415405,12.548303186036,10.6939404038369,9.15291968325158,10.3853879613926,13.0924002487308,16.5863600679129,12.2955412402829,12.6234873099802,17.2211150150086,10.3233888270915,10.5337838938196,12.5844680965915,1.50791283939272,3.26343410291226,9.34352118736169,12.417153583713,7.86697890940181,8.67366480782304,12.4590558486273,11.3611917241968,13.2513452154828,13.2749173060857,12.2791336707695,17.4447222505363,18.4922899488387,21.2307398091624,17.4068601720205,12.2747460322751,15.0209355619679,8.35435422696698,12.3487874131194,15.8478387263857,17.4289046508326,12.7026994688852,10.619611067197,7.04063844849446,9.06970670894253,4.71512699389745,8.26845300066164,15.9866276930842,11.3708448994017,14.5413491791002,13.9033977570041,9.16506598013866,12.6502330289999,13.4076206222643,8.85142974959849,9.00305470156551,6.85601024048599,10.7168517515796,12.4138163549592,14.0911365905636,18.1003922662333,6.69822888052118,11.4989136951218,12.2862601101016,6.83638033970382,15.6641940294406,13.5630118424561,17.2494965294526,13.8471919043638,14.6085400773105,9.61886760878507,10.5692422145991,4.78438466233988,9.70018279427146,6.11141940320049,3.76736914009382,4.23752105935178,4.80434163733698,5.94924504978494,9.23679585336143,8.43019840206985,0.954670618015114,13.6024477239888,13.62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| ||
|short_description=p2@Lrrc58 | |||
}} | }} |
Latest revision as of 23:41, 1 October 2015
Short description: | p2@Lrrc58 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lrrc58_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENSMUST00000078717, ENSMUST00000171099_5end |
EntrezGene: | Lrrc58 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.21e-14 | 44 |
neurectodermal cell | 3.21e-14 | 44 |
neural cell | 7.28e-14 | 43 |
electrically responsive cell | 3.38e-11 | 39 |
electrically active cell | 3.38e-11 | 39 |
neuron | 1.89e-09 | 33 |
neuronal stem cell | 1.89e-09 | 33 |
neuroblast | 1.89e-09 | 33 |
electrically signaling cell | 1.89e-09 | 33 |
embryonic cell | 5.96e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.39e-09 | 95 |
ectoderm | 3.39e-09 | 95 |
presumptive ectoderm | 3.39e-09 | 95 |
nervous system | 1.75e-07 | 75 |