FFCP PHASE1:Mm9::chr2:113669226..113669267,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:113669226..113669267,- to FFCP PHASE1:Mm9::chr2:113669226..113669267,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20394 | |EntrezGene=20394 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=P12961,Q3TT51 | |UniProt=P12961,Q3TT51 | ||
|association_with_transcript=0bp_to_NM_009162,uc008lpq.1_5end | |||
|cluster_id=chr2:113669226..113669267,- | |||
|description=CAGE_peak_2_at_Scg5_5end | |||
|id=chr2:113669226..113669267,- | |||
|ontology_enrichment_celltype=CL:0000221!4.88e-21!44;CL:0000133!4.88e-21!44;CL:0002319!1.26e-20!43;CL:0000540!7.81e-19!33;CL:0000047!7.81e-19!33;CL:0000031!7.81e-19!33;CL:0000404!7.81e-19!33;CL:0000117!1.63e-16!23;CL:0000337!1.63e-16!23;CL:0000055!6.97e-15!50;CL:0000393!1.71e-13!39;CL:0000211!1.71e-13!39;CL:0002321!2.30e-07!70;CL:0000220!2.30e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.75e-23,44;CL:0000133,2.75e-23,44;CL:0002319,7.96e-23,43;CL:0000540,7.95e-21,33;CL:0000047,7.95e-21,33;CL:0000031,7.95e-21,33;CL:0000404,7.95e-21,33;CL:0000117,3.08e-18,23;CL:0000337,3.08e-18,23;CL:0000393,6.06e-15,39;CL:0000211,6.06e-15,39;CL:0002321,2.12e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.38e-39!73;UBERON:0005743!2.38e-39!73;UBERON:0000073!4.40e-39!75;UBERON:0001016!4.40e-39!75;UBERON:0004121!1.08e-35!102;UBERON:0000924!1.08e-35!102;UBERON:0006601!1.08e-35!102;UBERON:0002346!1.17e-34!71;UBERON:0003075!1.17e-34!71;UBERON:0007284!1.17e-34!71;UBERON:0000033!6.35e-29!63;UBERON:0001049!7.34e-29!52;UBERON:0005068!7.34e-29!52;UBERON:0006241!7.34e-29!52;UBERON:0007135!7.34e-29!52;UBERON:0000955!3.44e-27!50;UBERON:0006238!3.44e-27!50;UBERON:0002616!1.36e-26!49;UBERON:0003056!4.52e-25!49;UBERON:0003080!3.50e-22!40;UBERON:0002780!1.24e-21!39;UBERON:0001890!1.24e-21!39;UBERON:0006240!1.24e-21!39;UBERON:0002020!3.44e-21!34;UBERON:0002791!1.77e-17!29;UBERON:0003528!1.77e-17!29;UBERON:0001893!1.77e-17!29;UBERON:0007811!6.35e-15!86;UBERON:0000956!3.01e-12!21;UBERON:0001869!3.01e-12!21;UBERON:0000203!3.01e-12!21;UBERON:0000153!2.49e-11!94;UBERON:0002619!6.18e-10!17;UBERON:0003076!4.12e-07!12;UBERON:0003057!4.12e-07!12;UBERON:0002021!8.52e-07!10;UBERON:0000411!8.52e-07!10;UBERON:0001950!8.52e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.85e-44,73;UBERON:0001016,1.96e-43,75;UBERON:0004121,2.32e-39,95;UBERON:0000924,2.32e-39,95;UBERON:0006601,2.32e-39,95;UBERON:0002346,5.88e-37,64;UBERON:0003075,5.88e-37,64;UBERON:0007284,5.88e-37,64;UBERON:0000073,5.98e-34,54;UBERON:0001049,5.09e-32,52;UBERON:0005068,5.09e-32,52;UBERON:0006241,5.09e-32,52;UBERON:0007135,5.09e-32,52;UBERON:0010371,4.62e-31,73;UBERON:0003056,8.65e-28,49;UBERON:0000955,1.08e-27,47;UBERON:0006238,1.08e-27,47;UBERON:0002616,4.90e-27,46;UBERON:0003080,1.45e-24,40;UBERON:0010314,5.41e-24,92;UBERON:0002780,5.96e-24,39;UBERON:0001890,5.96e-24,39;UBERON:0006240,5.96e-24,39;UBERON:0002020,1.86e-23,34;UBERON:0003528,2.58e-19,29;UBERON:0002791,2.58e-19,29;UBERON:0001893,2.58e-19,29;UBERON:0000956,1.77e-13,21;UBERON:0001869,1.77e-13,21;UBERON:0000203,1.77e-13,21;UBERON:0002619,6.71e-11,17;UBERON:0003076,9.38e-08,12;UBERON:0003057,9.38e-08,12;UBERON:0002021,2.11e-07,10;UBERON:0000411,2.11e-07,10;UBERON:0001950,2.11e-07,10;UBERON:0002420,4.64e-07,8;UBERON:0007245,4.64e-07,8;UBERON:0010009,4.64e-07,8;UBERON:0010011,4.64e-07,8;UBERON:0000454,4.64e-07,8 | |||
|phase1_expression=16.1750335575842,2.79180326111489,6.3699893514535,0,0,4.19698179779725,3.27057696833736,0.645616617207881,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,20.5804762165589,0,0,2.07990149631429,2.98232065387321,3.44539178469012,5.59990595006797,8.83432054012145,0.190023419456374,0.504060259519861,8.86922042621219,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0,0.183546752161682,1.56478268869608,39.4625533048608,7.68901639570651,8.74934545834275,9.51907667052465,10.062679505548,0,0,0,0.257259436035947,0,0,84.3659641784523,90.4574574555176,77.3274312277539,0.338844532069132,0,0,0,0.7104801149461,10.4860038681442,23.4373166246148,62.524836222012,56.9725059759735,57.2083894875759,126.543386090885,115.293378376742,60.6329456114022,66.9959842417472,56.0723459832113,61.6648933596577,84.4013304743091,91.8567068872336,74.5157525675595,95.6960752081205,69.2814782840491,115.30257858757,109.738708956178,96.8740890904976,79.5497180778903,103.21946857935,97.8597090582828,2.04460721999597,2.56943304363071,0,0,0,0,0,0,4.49422144421606,0,0,0,16.4786801138716,0,0,0,0,0,0,4.90990682791958,0,11.2816025689267,6.24547176358089,4.87144765299426,5.07354093963329,6.17962826265753,8.70156432804216,4.27266410520897,1.48316980640624,0,0,0,0,0,0,24.59358694897,25.761944938055,1.02182822083437,0,0,0,41.3422164757311,39.8025524452205,53.1517909437416,51.2781744567216,50.1202296367448,33.8694512632083,41.2092808192104,1.01839363850316,0.124406970610093,0.252722758433675,6.10281382070775,3.77349284591841,9.65588838620586,9.90341713929421,11.4535661555143,20.8872052394576,22.5480147701336,22.5821156188946,16.557015727297,0,0.189106080167819,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0,44.3711791470309,40.1327988279209,0.660837565967596,0.793351699990633,1.91959425481711,1.85789337488351,3.09281907173024,2.01683524623343,2.00140239460383,2.28270751335071,1.42358718463353,1.81168850196412,1.50801125280162,1.98956472041151,2.53453313254856,2.69645822596266,0.432276099749388,0.597423819763102,0.569003702859245,2.17072173958485,0,0.814605311381257,1.16371492300575,3.29638353484497,2.46622494784603,1.91893192373483,3.29697328466887,2.71473760627961,0,0,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0,0,0,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,39.6559957269846,34.5774475446999,0,0,11.042787679569,11.3227235846025,10.3403230911743,3.82350076724083,7.35235624471901,6.79383673893198,7.2865926301481,17.2430956167674,13.8350722281283,45.3063056154748,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0.728341908464944,0,1.69744571780308,1.77181135728464,3.68922177532713,3.6179961043551,6.90714086007261,3.92147116223193,2.84433082142234,1.05418608574999,2.06271086496374,126.643533340409,6.48219938512717,6.59729287292048,12.8602221018955,21.1034878034306,21.2258892946464,28.631529584769,31.9688196570329,0,0.42366414172764,0.882113592219848,0,0,0,0,0,0.874442509889552,35.2308073819968,0,0.206386867963223,0,0,0,0,0,0,0,0,2.68885594543965,1.62655573701479,2.16010681643603,1.67270636811575,2.18362563746178,1.21377911746339,1.23980183588004,0.785267825952089,0.777689839750757,0,0,0.149516546043979,0,0.777804753376191,0,0.337912250981556,0.234714477291508,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.487289403698762,0.0962118416403295,0,0,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.214368379079066,0,55.3456805764725,56.6200040903828,57.8624468573791,58.7737883615412,43.8452812653211,35.5035131773159,47.9265975164582,46.3830839320947,54.3770890781045,58.5069152279557,2.80225838477277,7.98049746802062,6.82934423016537,6.32077464377565,3.77303692730368,4.04455718590031,8.00088220085815,4.53277125925567,5.77654577265267,5.05394423527595,5.57654459758527,6.79054828989874,6.9294715527713,6.85069130732101,9.70659425349864,5.23923060411381,6.60540657885676,8.29509647993932,6.1812885120496,7.80154276712306,4.80016953339582,5.32427418478012,6.43777712857767,5.0871245821315,5.17601592284318,7.36147088657586,5.85369513192872,7.89209134313529,7.33342214767654,3.92799590160417,5.10130577933949,6.89531376628944,6.95692773388472,8.36658942404216,4.24394544158511,13.739581786587,5.38042699424439,8.59484216193193,3.82576664137687,1.54413993383661,1.85494268496337 | |phase1_expression=16.1750335575842,2.79180326111489,6.3699893514535,0,0,4.19698179779725,3.27057696833736,0.645616617207881,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,20.5804762165589,0,0,2.07990149631429,2.98232065387321,3.44539178469012,5.59990595006797,8.83432054012145,0.190023419456374,0.504060259519861,8.86922042621219,0,0,0,0.577703239502549,0,0,0,0,0,0,0,0,0,0,0.183546752161682,1.56478268869608,39.4625533048608,7.68901639570651,8.74934545834275,9.51907667052465,10.062679505548,0,0,0,0.257259436035947,0,0,84.3659641784523,90.4574574555176,77.3274312277539,0.338844532069132,0,0,0,0.7104801149461,10.4860038681442,23.4373166246148,62.524836222012,56.9725059759735,57.2083894875759,126.543386090885,115.293378376742,60.6329456114022,66.9959842417472,56.0723459832113,61.6648933596577,84.4013304743091,91.8567068872336,74.5157525675595,95.6960752081205,69.2814782840491,115.30257858757,109.738708956178,96.8740890904976,79.5497180778903,103.21946857935,97.8597090582828,2.04460721999597,2.56943304363071,0,0,0,0,0,0,4.49422144421606,0,0,0,16.4786801138716,0,0,0,0,0,0,4.90990682791958,0,11.2816025689267,6.24547176358089,4.87144765299426,5.07354093963329,6.17962826265753,8.70156432804216,4.27266410520897,1.48316980640624,0,0,0,0,0,0,24.59358694897,25.761944938055,1.02182822083437,0,0,0,41.3422164757311,39.8025524452205,53.1517909437416,51.2781744567216,50.1202296367448,33.8694512632083,41.2092808192104,1.01839363850316,0.124406970610093,0.252722758433675,6.10281382070775,3.77349284591841,9.65588838620586,9.90341713929421,11.4535661555143,20.8872052394576,22.5480147701336,22.5821156188946,16.557015727297,0,0.189106080167819,0.175951124163949,0,0,0,0,0.59710280045548,0,0,0,0,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0,0,0,0.219550115291051,0,44.3711791470309,40.1327988279209,0.660837565967596,0.793351699990633,1.91959425481711,1.85789337488351,3.09281907173024,2.01683524623343,2.00140239460383,2.28270751335071,1.42358718463353,1.81168850196412,1.50801125280162,1.98956472041151,2.53453313254856,2.69645822596266,0.432276099749388,0.597423819763102,0.569003702859245,2.17072173958485,0,0.814605311381257,1.16371492300575,3.29638353484497,2.46622494784603,1.91893192373483,3.29697328466887,2.71473760627961,0,0,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0,0,0,0,0,0.318909537314974,0,0,0.144649058581512,0,0,0,0,39.6559957269846,34.5774475446999,0,0,11.042787679569,11.3227235846025,10.3403230911743,3.82350076724083,7.35235624471901,6.79383673893198,7.2865926301481,17.2430956167674,13.8350722281283,45.3063056154748,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0.728341908464944,0,1.69744571780308,1.77181135728464,3.68922177532713,3.6179961043551,6.90714086007261,3.92147116223193,2.84433082142234,1.05418608574999,2.06271086496374,126.643533340409,6.48219938512717,6.59729287292048,12.8602221018955,21.1034878034306,21.2258892946464,28.631529584769,31.9688196570329,0,0.42366414172764,0.882113592219848,0,0,0,0,0,0.874442509889552,35.2308073819968,0,0.206386867963223,0,0,0,0,0,0,0,0,2.68885594543965,1.62655573701479,2.16010681643603,1.67270636811575,2.18362563746178,1.21377911746339,1.23980183588004,0.785267825952089,0.777689839750757,0,0,0.149516546043979,0,0.777804753376191,0,0.337912250981556,0.234714477291508,0,0,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0.100826185136841,0.487289403698762,0.0962118416403295,0,0,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0.214368379079066,0,55.3456805764725,56.6200040903828,57.8624468573791,58.7737883615412,43.8452812653211,35.5035131773159,47.9265975164582,46.3830839320947,54.3770890781045,58.5069152279557,2.80225838477277,7.98049746802062,6.82934423016537,6.32077464377565,3.77303692730368,4.04455718590031,8.00088220085815,4.53277125925567,5.77654577265267,5.05394423527595,5.57654459758527,6.79054828989874,6.9294715527713,6.85069130732101,9.70659425349864,5.23923060411381,6.60540657885676,8.29509647993932,6.1812885120496,7.80154276712306,4.80016953339582,5.32427418478012,6.43777712857767,5.0871245821315,5.17601592284318,7.36147088657586,5.85369513192872,7.89209134313529,7.33342214767654,3.92799590160417,5.10130577933949,6.89531376628944,6.95692773388472,8.36658942404216,4.24394544158511,13.739581786587,5.38042699424439,8.59484216193193,3.82576664137687,1.54413993383661,1.85494268496337 | ||
|short_description=p2@Scg5 | |||
}} | }} |
Latest revision as of 23:34, 1 October 2015
Short description: | p2@Scg5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Scg5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_NM_009162, uc008lpq.1_5end |
EntrezGene: | Scg5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.75e-23 | 44 |
neurectodermal cell | 2.75e-23 | 44 |
neural cell | 7.96e-23 | 43 |
neuron | 7.95e-21 | 33 |
neuronal stem cell | 7.95e-21 | 33 |
neuroblast | 7.95e-21 | 33 |
electrically signaling cell | 7.95e-21 | 33 |
CNS neuron (sensu Vertebrata) | 3.08e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.08e-18 | 23 |
electrically responsive cell | 6.06e-15 | 39 |
electrically active cell | 6.06e-15 | 39 |
embryonic cell | 2.12e-09 | 70 |