FFCP PHASE1:Mm9::chr5:132014025..132014107,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:132014025..132014107,- to FFCP PHASE1:Mm9::chr5:132014025..132014107,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=319974 | |EntrezGene=319974 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-185bp_to_ENSMUST00000159507_5end | |||
|cluster_id=chr5:132014025..132014107,- | |||
|description=CAGE_peak_3_at_Auts2_5end | |||
|id=chr5:132014025..132014107,- | |||
|ontology_enrichment_celltype=CL:0000540!3.95e-14!33;CL:0000047!3.95e-14!33;CL:0000031!3.95e-14!33;CL:0000404!3.95e-14!33;CL:0000221!2.55e-12!44;CL:0000133!2.55e-12!44;CL:0002319!2.99e-12!43;CL:0000393!3.35e-11!39;CL:0000211!3.35e-11!39;CL:0000117!6.00e-10!23;CL:0000337!6.00e-10!23;CL:0000055!2.30e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.57e-14,33;CL:0000047,2.57e-14,33;CL:0000031,2.57e-14,33;CL:0000404,2.57e-14,33;CL:0000221,1.76e-12,44;CL:0000133,1.76e-12,44;CL:0002319,2.07e-12,43;CL:0000393,2.83e-11,39;CL:0000211,2.83e-11,39;CL:0000117,4.50e-10,23;CL:0000337,4.50e-10,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.95e-13!102;UBERON:0000924!3.95e-13!102;UBERON:0006601!3.95e-13!102;UBERON:0000073!7.21e-13!75;UBERON:0001016!7.21e-13!75;UBERON:0000468!1.49e-12!333;UBERON:0001017!1.76e-12!73;UBERON:0005743!1.76e-12!73;UBERON:0000922!2.62e-10!328;UBERON:0000033!4.48e-09!63;UBERON:0003056!9.80e-09!49;UBERON:0002346!1.04e-08!71;UBERON:0003075!1.04e-08!71;UBERON:0007284!1.04e-08!71;UBERON:0001049!1.79e-07!52;UBERON:0005068!1.79e-07!52;UBERON:0006241!1.79e-07!52;UBERON:0007135!1.79e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.00e-15,95;UBERON:0000924,1.00e-15,95;UBERON:0006601,1.00e-15,95;UBERON:0001016,4.90e-13,75;UBERON:0001017,1.21e-12,73;UBERON:0002346,4.08e-11,64;UBERON:0003075,4.08e-11,64;UBERON:0007284,4.08e-11,64;UBERON:0010371,1.30e-10,73;UBERON:0010314,2.85e-10,92;UBERON:0000922,1.33e-09,320;UBERON:0003056,7.66e-09,49;UBERON:0000073,4.57e-08,54;UBERON:0001049,1.46e-07,52;UBERON:0005068,1.46e-07,52;UBERON:0006241,1.46e-07,52;UBERON:0007135,1.46e-07,52;UBERON:0002020,8.72e-07,34 | |||
|phase1_expression=3.52327463630547,0.348975407639361,0.909998478779072,0.60492842261366,0,6.37941233265181,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,4.31979541542198,2.06468352960453,0,0.86152399231815,2.58565479223067,2.28028103347649,3.52842181663903,2.66076612786366,0,0,0,11.2652131702997,5.81821258754723,10.6168065256432,0,0,0,0,0,0,0.251793635951155,1.11514624341466,1.83546752161682,5.47673941043627,4.79655344036982,3.07560655828261,3.4997381833371,4.61955191363696,1.43752564364972,0,0,0,2.31533492432352,5.15760191889762,3.6097046459421,41.2725580153579,37.0293685490423,41.8328726314078,0.338844532069132,0.889294796111139,0.449949858640699,0,0,2.99600110518405,3.07374644257244,45.1049813541878,42.1218527594875,44.7992167678444,7.42692559449889,4.41737081903227,31.2351537998133,29.3287141315803,46.8801581171111,7.70811166995721,5.74593021383345,6.60508093001847,47.8747224460604,42.8162172059277,39.068502791757,3.62937898701795,1.68828783009504,5.34793867218835,10.0173719061047,13.5253096759148,30.9423080069999,6.73963120665338,5.81901012822248,2.6087803983151,0,0,0,0,0,2.10666630197628,0,0,0,5.63373679106722,0,0,0,2.16491041011214,1.01343946190039,4.04419556011827,1.94112595522402,0.517875767294343,0.890652834388949,2.60227990149204,1.52232739156071,1.84492397804847,1.3565037649736,1.76383060703557,1.0053327306374,2.22475470960936,4.04878199375753,0.884610551949874,7.44127509758082,2.87093973998512,1.93950101254089,9.31958806090611,2.04946557908083,2.72280718857492,5.10914110417183,0,0,0,4.19413790333504,5.03250663100489,22.3664746760899,7.30062144807561,6.64860189058859,5.61027720310812,5.67844420737152,2.74966282395854,1.61729061793121,0.758168275301024,2.94618598241064,12.4915625244196,5.0578462975364,8.64298223065676,10.7000420663358,14.6278473175355,12.2989171473456,7.68354141389776,4.9153640440413,21.5567992932842,23.070941780474,19.3546236580344,7.89104636739269,10.0097009721215,7.66154766348766,8.64284972913362,2.7864797354589,0,0,0,7.66365358381357,6.56672967947069,5.76198596675248,8.04932100989715,6.88674811115913,6.63348585415727,3.95307706075693,2.95100741539581,3.97002164048376,3.78487654801005,5.74586124276833,5.43161023957233,4.38599962275997,5.26920276698522,3.35516046900929,6.72927835405207,28.0929591795446,1.65209391491899,3.70230793328962,12.1574302805083,10.9151235774406,9.40732467651281,7.86565746031036,4.89231696458715,4.1849637744763,6.16887780007865,3.62337700392824,4.27269854960458,3.58121649674071,5.65395852645448,14.3811105384675,5.18731319699266,5.97423819763102,7.58671603812327,6.28366819353509,5.63538678365402,6.10953983535943,4.84881217919064,3.22624771495465,1.83385957660346,1.03327103585722,0.627994911365499,0.493588655687202,0,3.33690211432188,1.57247196090562,1.34917267430912,0.811440485554012,0.482354319504834,0.763877555344259,0.575392274901621,0.486405680325106,0.549122826376163,1.43768206527355,1.48856379067401,1.24815069245824,0,0.179397413521912,0,2.58654466233247,4.73728529426212,8.31121379854332,4.75286240170527,3.28566347603903,2.34508760418542,0.952174563544055,1.17080188714679,3.78324345854858,2.21464689648775,3.82691444777969,1.3109065177259,0.863424909329478,1.3018415272336,0,0,0,2.48343071674259,2.24770825982909,4.10240903072711,0.163934945376675,3.02965112645248,12.6203287766503,10.1514073517126,15.2950612390287,11.2315335037699,13.8135177931084,15.0030561318081,13.7635638569464,10.5212108848072,8.69633111482352,2.89189184779626,4.9679029822894,1.6025904330053,3.58351310577867,2.47455184458803,1.32745138339963,7.76898035695941,4.23252979750651,3.77210159511796,1.77181135728464,2.15204603560749,2.84271122485043,3.63533729477506,5.34746067577082,0.948110273807448,2.10837217149998,1.03135543248187,3.40439605753788,14.0447653344422,11.9009989080134,7.07312215604255,9.04435191575595,7.13475270408282,5.10101963866575,2.13125464380219,1.64270195644597,1.27099242518292,0.882113592219848,7.09010887648364,6.29711264114032,5.60910201831849,3.10368094408155,3.77524069413641,6.99554007911642,5.56275906031529,0,1.44470807574256,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0.138199973804424,0,14.3932877079417,7.5228202836934,6.15630442684267,7.94535524854981,5.02233896616208,4.98998081623837,5.70308844504818,3.14107130380836,5.4438288782553,7.45607175704311,0.56369293868419,5.68162874967119,3.14371131868485,5.44463327363333,2.58319646955462,5.23763989021412,2.22978753426933,2.8644964665669,2.41176492179135,1.69108884578204,2.88030006257865,0.632022241256357,5.0681303822541,4.82741498674688,1.94881234466693,0.895133478337407,0.596044064343795,0.360586348559907,0.147689527174577,0.706765149637033,0.457240839929999,0.201652370273681,0.0974578807397524,0.288635524920988,0,8.84248496099324,2.44184548711471,2.15313255862742,2.51826924546118,7.72758376128762,0.93841237725591,5.12824547948342,6.64541975145104,0.501572104035363,3.95326289831947,5.52390283808612,1.71868654031819,2.57779773515531,4.11049511862385,3.0215755895588,4.72515750162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| |phase1_expression=3.52327463630547,0.348975407639361,0.909998478779072,0.60492842261366,0,6.37941233265181,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,4.31979541542198,2.06468352960453,0,0.86152399231815,2.58565479223067,2.28028103347649,3.52842181663903,2.66076612786366,0,0,0,11.2652131702997,5.81821258754723,10.6168065256432,0,0,0,0,0,0,0.251793635951155,1.11514624341466,1.83546752161682,5.47673941043627,4.79655344036982,3.07560655828261,3.4997381833371,4.61955191363696,1.43752564364972,0,0,0,2.31533492432352,5.15760191889762,3.6097046459421,41.2725580153579,37.0293685490423,41.8328726314078,0.338844532069132,0.889294796111139,0.449949858640699,0,0,2.99600110518405,3.07374644257244,45.1049813541878,42.1218527594875,44.7992167678444,7.42692559449889,4.41737081903227,31.2351537998133,29.3287141315803,46.8801581171111,7.70811166995721,5.74593021383345,6.60508093001847,47.8747224460604,42.8162172059277,39.068502791757,3.62937898701795,1.68828783009504,5.34793867218835,10.0173719061047,13.5253096759148,30.9423080069999,6.73963120665338,5.81901012822248,2.6087803983151,0,0,0,0,0,2.10666630197628,0,0,0,5.63373679106722,0,0,0,2.16491041011214,1.01343946190039,4.04419556011827,1.94112595522402,0.517875767294343,0.890652834388949,2.60227990149204,1.52232739156071,1.84492397804847,1.3565037649736,1.76383060703557,1.0053327306374,2.22475470960936,4.04878199375753,0.884610551949874,7.44127509758082,2.87093973998512,1.93950101254089,9.31958806090611,2.04946557908083,2.72280718857492,5.10914110417183,0,0,0,4.19413790333504,5.03250663100489,22.3664746760899,7.30062144807561,6.64860189058859,5.61027720310812,5.67844420737152,2.74966282395854,1.61729061793121,0.758168275301024,2.94618598241064,12.4915625244196,5.0578462975364,8.64298223065676,10.7000420663358,14.6278473175355,12.2989171473456,7.68354141389776,4.9153640440413,21.5567992932842,23.070941780474,19.3546236580344,7.89104636739269,10.0097009721215,7.66154766348766,8.64284972913362,2.7864797354589,0,0,0,7.66365358381357,6.56672967947069,5.76198596675248,8.04932100989715,6.88674811115913,6.63348585415727,3.95307706075693,2.95100741539581,3.97002164048376,3.78487654801005,5.74586124276833,5.43161023957233,4.38599962275997,5.26920276698522,3.35516046900929,6.72927835405207,28.0929591795446,1.65209391491899,3.70230793328962,12.1574302805083,10.9151235774406,9.40732467651281,7.86565746031036,4.89231696458715,4.1849637744763,6.16887780007865,3.62337700392824,4.27269854960458,3.58121649674071,5.65395852645448,14.3811105384675,5.18731319699266,5.97423819763102,7.58671603812327,6.28366819353509,5.63538678365402,6.10953983535943,4.84881217919064,3.22624771495465,1.83385957660346,1.03327103585722,0.627994911365499,0.493588655687202,0,3.33690211432188,1.57247196090562,1.34917267430912,0.811440485554012,0.482354319504834,0.763877555344259,0.575392274901621,0.486405680325106,0.549122826376163,1.43768206527355,1.48856379067401,1.24815069245824,0,0.179397413521912,0,2.58654466233247,4.73728529426212,8.31121379854332,4.75286240170527,3.28566347603903,2.34508760418542,0.952174563544055,1.17080188714679,3.78324345854858,2.21464689648775,3.82691444777969,1.3109065177259,0.863424909329478,1.3018415272336,0,0,0,2.48343071674259,2.24770825982909,4.10240903072711,0.163934945376675,3.02965112645248,12.6203287766503,10.1514073517126,15.2950612390287,11.2315335037699,13.8135177931084,15.0030561318081,13.7635638569464,10.5212108848072,8.69633111482352,2.89189184779626,4.9679029822894,1.6025904330053,3.58351310577867,2.47455184458803,1.32745138339963,7.76898035695941,4.23252979750651,3.77210159511796,1.77181135728464,2.15204603560749,2.84271122485043,3.63533729477506,5.34746067577082,0.948110273807448,2.10837217149998,1.03135543248187,3.40439605753788,14.0447653344422,11.9009989080134,7.07312215604255,9.04435191575595,7.13475270408282,5.10101963866575,2.13125464380219,1.64270195644597,1.27099242518292,0.882113592219848,7.09010887648364,6.29711264114032,5.60910201831849,3.10368094408155,3.77524069413641,6.99554007911642,5.56275906031529,0,1.44470807574256,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0.138199973804424,0,14.3932877079417,7.5228202836934,6.15630442684267,7.94535524854981,5.02233896616208,4.98998081623837,5.70308844504818,3.14107130380836,5.4438288782553,7.45607175704311,0.56369293868419,5.68162874967119,3.14371131868485,5.44463327363333,2.58319646955462,5.23763989021412,2.22978753426933,2.8644964665669,2.41176492179135,1.69108884578204,2.88030006257865,0.632022241256357,5.0681303822541,4.82741498674688,1.94881234466693,0.895133478337407,0.596044064343795,0.360586348559907,0.147689527174577,0.706765149637033,0.457240839929999,0.201652370273681,0.0974578807397524,0.288635524920988,0,8.84248496099324,2.44184548711471,2.15313255862742,2.51826924546118,7.72758376128762,0.93841237725591,5.12824547948342,6.64541975145104,0.501572104035363,3.95326289831947,5.52390283808612,1.71868654031819,2.57779773515531,4.11049511862385,3.0215755895588,4.72515750162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| ||
|short_description=p3@Auts2 | |||
}} | }} |
Latest revision as of 23:19, 1 October 2015
Short description: | p3@Auts2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Auts2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -185bp_to_ENSMUST00000159507_5end |
EntrezGene: | Auts2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.57e-14 | 33 |
neuronal stem cell | 2.57e-14 | 33 |
neuroblast | 2.57e-14 | 33 |
electrically signaling cell | 2.57e-14 | 33 |
ectodermal cell | 1.76e-12 | 44 |
neurectodermal cell | 1.76e-12 | 44 |
neural cell | 2.07e-12 | 43 |
electrically responsive cell | 2.83e-11 | 39 |
electrically active cell | 2.83e-11 | 39 |
CNS neuron (sensu Vertebrata) | 4.50e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.50e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.00e-15 | 95 |
ectoderm | 1.00e-15 | 95 |
presumptive ectoderm | 1.00e-15 | 95 |
nervous system | 4.90e-13 | 75 |
central nervous system | 1.21e-12 | 73 |
neurectoderm | 4.08e-11 | 64 |
neural plate | 4.08e-11 | 64 |
presumptive neural plate | 4.08e-11 | 64 |
ecto-epithelium | 1.30e-10 | 73 |
structure with developmental contribution from neural crest | 2.85e-10 | 92 |
embryo | 1.33e-09 | 320 |
pre-chordal neural plate | 7.66e-09 | 49 |
regional part of nervous system | 4.57e-08 | 54 |
neural tube | 1.46e-07 | 52 |
neural rod | 1.46e-07 | 52 |
future spinal cord | 1.46e-07 | 52 |
neural keel | 1.46e-07 | 52 |
gray matter | 8.72e-07 | 34 |