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FFCP PHASE1:Mm9::chr3:34548946..34548972,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr3:34548946..34548972,+
|DHSsupport=NA
|short_description=p2@Sox2
|DPIdataset=NA
|description=CAGE_peak_2_at_Sox2_5end
|association_with_transcript=-4bp_to_ENSMUST00000169607_5end
|EntrezGene=20674
|EntrezGene=20674
|HGNC=
|HGNC=
|MCL_coexpression_id=3407
|TSSclassifier=NA
|UniProt=Q60I23
|UniProt=Q60I23
|association_with_transcript=-4bp_to_ENSMUST00000169607_5end
|cluster_id=chr3:34548946..34548972,+
|description=CAGE_peak_2_at_Sox2_5end
|id=chr3:34548946..34548972,+
|ontology_enrichment_celltype=CL:0000221!1.74e-27!44;CL:0000133!1.74e-27!44;CL:0002319!1.33e-26!43;CL:0000055!1.59e-22!50;CL:0000540!8.86e-20!33;CL:0000047!8.86e-20!33;CL:0000031!8.86e-20!33;CL:0000404!8.86e-20!33;CL:0000393!7.46e-17!39;CL:0000211!7.46e-17!39;CL:0000117!1.33e-13!23;CL:0000337!1.33e-13!23;CL:0002321!5.12e-13!70;CL:0000220!5.12e-13!70;CL:0000333!1.45e-07!10;CL:0000095!1.45e-07!10;CL:0000243!1.45e-07!10;CL:0000123!1.45e-07!10;CL:0000125!1.45e-07!10;CL:0000030!1.45e-07!10;CL:0000339!1.45e-07!10;CL:0000107!8.66e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000221,4.50e-30,44;CL:0000133,4.50e-30,44;CL:0002319,4.46e-29,43;CL:0000540,3.15e-22,33;CL:0000047,3.15e-22,33;CL:0000031,3.15e-22,33;CL:0000404,3.15e-22,33;CL:0000393,3.31e-17,39;CL:0000211,3.31e-17,39;CL:0000117,3.23e-15,23;CL:0000337,3.23e-15,23;CL:0002321,1.39e-14,70;CL:0000333,1.64e-07,10;CL:0000095,1.64e-07,10;CL:0000243,1.64e-07,10;CL:0000123,1.64e-07,10;CL:0000125,1.64e-07,10;CL:0000030,1.64e-07,10;CL:0000339,1.64e-07,10;CL:0000107,1.71e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.39e-43!75;UBERON:0001016!7.39e-43!75;UBERON:0001017!6.49e-41!73;UBERON:0005743!6.49e-41!73;UBERON:0004121!3.09e-40!102;UBERON:0000924!3.09e-40!102;UBERON:0006601!3.09e-40!102;UBERON:0002346!1.50e-28!71;UBERON:0003075!1.50e-28!71;UBERON:0007284!1.50e-28!71;UBERON:0000033!1.58e-28!63;UBERON:0001049!1.20e-26!52;UBERON:0005068!1.20e-26!52;UBERON:0006241!1.20e-26!52;UBERON:0007135!1.20e-26!52;UBERON:0000955!7.52e-24!50;UBERON:0006238!7.52e-24!50;UBERON:0002616!2.25e-23!49;UBERON:0003056!1.53e-22!49;UBERON:0003080!7.16e-20!40;UBERON:0002780!2.62e-19!39;UBERON:0001890!2.62e-19!39;UBERON:0006240!2.62e-19!39;UBERON:0002020!2.00e-18!34;UBERON:0002791!5.85e-15!29;UBERON:0003528!5.85e-15!29;UBERON:0001893!5.85e-15!29;UBERON:0007811!2.95e-14!86;UBERON:0000153!6.76e-12!94;UBERON:0000956!1.19e-10!21;UBERON:0001869!1.19e-10!21;UBERON:0000203!1.19e-10!21;UBERON:0002619!4.56e-09!17;UBERON:0000010!2.55e-08!11;UBERON:0004111!8.49e-08!122;UBERON:0003076!2.82e-07!12;UBERON:0003057!2.82e-07!12;UBERON:0002410!8.66e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-47,75;UBERON:0001017,2.52e-45,73;UBERON:0004121,7.56e-45,95;UBERON:0000924,7.56e-45,95;UBERON:0006601,7.56e-45,95;UBERON:0002346,3.53e-34,64;UBERON:0003075,3.53e-34,64;UBERON:0007284,3.53e-34,64;UBERON:0010371,8.92e-30,73;UBERON:0000073,1.01e-29,54;UBERON:0001049,3.39e-29,52;UBERON:0005068,3.39e-29,52;UBERON:0006241,3.39e-29,52;UBERON:0007135,3.39e-29,52;UBERON:0000955,9.42e-25,47;UBERON:0006238,9.42e-25,47;UBERON:0003056,1.06e-24,49;UBERON:0002616,3.19e-24,46;UBERON:0003080,2.48e-22,40;UBERON:0002780,1.08e-21,39;UBERON:0001890,1.08e-21,39;UBERON:0006240,1.08e-21,39;UBERON:0002020,1.08e-20,34;UBERON:0010314,4.82e-19,92;UBERON:0003528,9.31e-17,29;UBERON:0002791,9.31e-17,29;UBERON:0001893,9.31e-17,29;UBERON:0011216,4.81e-12,194;UBERON:0000956,7.20e-12,21;UBERON:0001869,7.20e-12,21;UBERON:0000203,7.20e-12,21;UBERON:0002619,4.48e-10,17;UBERON:0000010,3.14e-09,11;UBERON:0002410,1.71e-07,9;UBERON:0004111,2.33e-07,122;UBERON:0003076,2.83e-07,12;UBERON:0003057,2.83e-07,12;UBERON:0000025,4.51e-07,114
|phase1_expression=9.44878197918284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.01376931219515,0.550640256485045,0.782391344348039,27.4711697039363,25.2639110144643,18.2764105129826,10.7789544651529,25.8754615856949,0,0,0,0.257259436035947,0,0,13.9598357993122,8.46385566835253,8.87363964908651,3.72728985276045,0.889294796111139,0,0,0,26.0652096151012,54.1747810503392,9.12468588314603,7.02030879324791,9.46462326081219,23.7090317055157,20.7616428494517,26.4580126304301,28.370259421398,11.0306254393203,1.10115880999389,11.2364857514965,10.2916377281683,26.2453712583086,23.1463738314096,26.5665818983948,7.53794097303729,6.75315132038016,6.41752640662602,15.6153150301044,18.9354335462807,11.3703661953433,29.8361201732745,37.9369231736063,0,0,0,0,0,0,0.561777680527007,0,0,0,58.3091757875457,0,0,0,6.71122227134764,5.57391704045217,5.05524445014783,0.22836775943812,0,0.148442139064825,0.867426633830679,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,5.85561594023094,6.49284791121711,0,0,0,0,10.1857634795279,8.23501085073528,18.4711897605911,6.08385120672968,6.90431734791892,12.0517065844545,7.30085683804909,0,0,0,0.420883711772948,8.97831056442656,5.51765050640335,8.46292010085141,5.27466862425003,8.98081788797528,5.89323113310309,7.30873451565885,2.06962696591213,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,7.78072809687271,12.0398396483763,0,0,0,1.16118335930219,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77129785249907,1.32643988239339,1.30371981153621,0.509235257325564,1.40814148973101,0.670025029767263,1.19021820443007,1.75620283072019,1.41871629695572,1.7717175171902,0.797273843287435,1.47476983244164,1.38147985492716,2.16973587872267,0,0,0,0,10.4357883492065,8.67366480782304,0,0,10.4117712407365,10.9322848403059,14.0025208526319,10.9925647058174,14.0363164671908,11.889214293131,13.3587531552715,12.2747460322751,12.2539211163422,8.03303291054518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,9.54323798365944,15.264324686365,9.21649250635847,8.86701168211368,5.52943334566419,7.0756078858912,6.69822888052118,0.469343416127421,0,0.661585194164886,0,0.645857706783622,0.241251699712623,0.477489376012546,0.164140899745061,0,13.5360470467672,0,0,0,0,0,0,0,0,0,6.68269432610579,5.21954389408873,6.09958401380546,6.69633113095168,8.15444354456428,10.4814030598165,7.01294601201068,6.4469695465762,4.97336289769656,0,1.24267862617385,0,1.19613236835183,0.66183396182839,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.201932899896295,0,0,0,0,0,5.8949899739955,4.43971906748129,6.10054224944435,2.3503846290971,0.772758376128762,0,0,0.428736758158132,0.501572104035363,8.471277639256,7.36520378411483,6.87474616127276,7.38968684077857,6.85082519770642,8.3093328712867,10.1253375034771,3.60256962579376,4.07828168085784,6.21312374102184,10.2749474108335,4.38927360741134,3.07320490357441,3.64660075602441,3.35381060204772,2.02227859295016,1.11123363900808,1.23621034343337,2.24643446714271,1.76888048234658,1.77435509923168,1.69763707247469,1.87283014939765,1.34452820050225,2.12511235135769,0.952587382566147,2.31768651889711,1.92909220463705,1.64834360321323,1.91358596174717,1.37147700954166,1.24233064311536,1.66905332963125,1.88950341622027,2.07040636913727,1.4384483341585,1.82927972872773,1.31534855718921,2.30866993537965,1.68342681497322,1.54225523561426,1.77308068276014,0,0.929621047115796,0.771626443924566,6.24526444844865,1.63752125911786,1.50409737833809,1.14772999241306,0.441182838239031,0.463735671240843
|phase1_expression=9.44878197918284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.01376931219515,0.550640256485045,0.782391344348039,27.4711697039363,25.2639110144643,18.2764105129826,10.7789544651529,25.8754615856949,0,0,0,0.257259436035947,0,0,13.9598357993122,8.46385566835253,8.87363964908651,3.72728985276045,0.889294796111139,0,0,0,26.0652096151012,54.1747810503392,9.12468588314603,7.02030879324791,9.46462326081219,23.7090317055157,20.7616428494517,26.4580126304301,28.370259421398,11.0306254393203,1.10115880999389,11.2364857514965,10.2916377281683,26.2453712583086,23.1463738314096,26.5665818983948,7.53794097303729,6.75315132038016,6.41752640662602,15.6153150301044,18.9354335462807,11.3703661953433,29.8361201732745,37.9369231736063,0,0,0,0,0,0,0.561777680527007,0,0,0,58.3091757875457,0,0,0,6.71122227134764,5.57391704045217,5.05524445014783,0.22836775943812,0,0.148442139064825,0.867426633830679,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,5.85561594023094,6.49284791121711,0,0,0,0,10.1857634795279,8.23501085073528,18.4711897605911,6.08385120672968,6.90431734791892,12.0517065844545,7.30085683804909,0,0,0,0.420883711772948,8.97831056442656,5.51765050640335,8.46292010085141,5.27466862425003,8.98081788797528,5.89323113310309,7.30873451565885,2.06962696591213,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,7.78072809687271,12.0398396483763,0,0,0,1.16118335930219,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77129785249907,1.32643988239339,1.30371981153621,0.509235257325564,1.40814148973101,0.670025029767263,1.19021820443007,1.75620283072019,1.41871629695572,1.7717175171902,0.797273843287435,1.47476983244164,1.38147985492716,2.16973587872267,0,0,0,0,10.4357883492065,8.67366480782304,0,0,10.4117712407365,10.9322848403059,14.0025208526319,10.9925647058174,14.0363164671908,11.889214293131,13.3587531552715,12.2747460322751,12.2539211163422,8.03303291054518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,9.54323798365944,15.264324686365,9.21649250635847,8.86701168211368,5.52943334566419,7.0756078858912,6.69822888052118,0.469343416127421,0,0.661585194164886,0,0.645857706783622,0.241251699712623,0.477489376012546,0.164140899745061,0,13.5360470467672,0,0,0,0,0,0,0,0,0,6.68269432610579,5.21954389408873,6.09958401380546,6.69633113095168,8.15444354456428,10.4814030598165,7.01294601201068,6.4469695465762,4.97336289769656,0,1.24267862617385,0,1.19613236835183,0.66183396182839,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0.201932899896295,0,0,0,0,0,5.8949899739955,4.43971906748129,6.10054224944435,2.3503846290971,0.772758376128762,0,0,0.428736758158132,0.501572104035363,8.471277639256,7.36520378411483,6.87474616127276,7.38968684077857,6.85082519770642,8.3093328712867,10.1253375034771,3.60256962579376,4.07828168085784,6.21312374102184,10.2749474108335,4.38927360741134,3.07320490357441,3.64660075602441,3.35381060204772,2.02227859295016,1.11123363900808,1.23621034343337,2.24643446714271,1.76888048234658,1.77435509923168,1.69763707247469,1.87283014939765,1.34452820050225,2.12511235135769,0.952587382566147,2.31768651889711,1.92909220463705,1.64834360321323,1.91358596174717,1.37147700954166,1.24233064311536,1.66905332963125,1.88950341622027,2.07040636913727,1.4384483341585,1.82927972872773,1.31534855718921,2.30866993537965,1.68342681497322,1.54225523561426,1.77308068276014,0,0.929621047115796,0.771626443924566,6.24526444844865,1.63752125911786,1.50409737833809,1.14772999241306,0.441182838239031,0.463735671240843
|short_description=p2@Sox2
}}
}}

Latest revision as of 23:14, 1 October 2015

Short description:p2@Sox2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sox2_5end
Coexpression cluster:MCL_coexpression_mm9:3407
Association with transcript: -4bp_to_ENSMUST00000169607_5end
EntrezGene:Sox2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Sox2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C227.47
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B825.26
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.96
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C826.07
Mouse Microglia, donor2.CNhs12634.11736-123E854.17
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.76
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D226.46
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F228.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.57
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.42
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.94
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.37
Mouse Schwann, donor1.CNhs12507.11728-123D929.84
Mouse Schwann, donor2.CNhs12573.11746-123F937.94
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G658.31
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F118.47
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B27.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C68.98
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C98.46
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C68.98
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G87.31
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G112.04
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C210.44
medulla oblongata, neonate N30.CNhs11200.1396-42A38.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.89
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.36
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E69.54
pituitary gland, embryo E13.CNhs11009.370-44C715.26
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F57.08
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.54
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D46.70
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C610.48
stomach, neonate N03.CNhs11193.1340-24B87.01
stomach, neonate N07.CNhs11210.718-18A96.45
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B45.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.10
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.39
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I810.27
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.61e-4775
central nervous system2.52e-4573
ectoderm-derived structure7.56e-4595
ectoderm7.56e-4595
presumptive ectoderm7.56e-4595
neurectoderm3.53e-3464
neural plate3.53e-3464
presumptive neural plate3.53e-3464
ecto-epithelium8.92e-3073
regional part of nervous system1.01e-2954
neural tube3.39e-2952
neural rod3.39e-2952
future spinal cord3.39e-2952
neural keel3.39e-2952
brain9.42e-2547
future brain9.42e-2547
pre-chordal neural plate1.06e-2449
regional part of brain3.19e-2446
anterior neural tube2.48e-2240
regional part of forebrain1.08e-2139
forebrain1.08e-2139
future forebrain1.08e-2139
gray matter1.08e-2034
structure with developmental contribution from neural crest4.82e-1992
brain grey matter9.31e-1729
regional part of telencephalon9.31e-1729
telencephalon9.31e-1729
organ system subdivision4.81e-12194
cerebral cortex7.20e-1221
cerebral hemisphere7.20e-1221
pallium7.20e-1221
regional part of cerebral cortex4.48e-1017
peripheral nervous system3.14e-0911
autonomic nervous system1.71e-079
anatomical conduit2.33e-07122
posterior neural tube2.83e-0712
chordal neural plate2.83e-0712
tube4.51e-07114
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