FFCP PHASE1:Mm9::chr5:130500150..130500227,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109900 | |EntrezGene=109900 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=120 | |||
|TSSclassifier=NA | |||
|UniProt=E0CY49,E0CYV3,Q91YI0 | |UniProt=E0CY49,E0CYV3,Q91YI0 | ||
|association_with_transcript=0bp_to_ENSMUST00000161640,ENSMUST00000161884,ENSMUST00000162230,NM_133768,uc008zty.1_5end | |association_with_transcript=0bp_to_ENSMUST00000161640,ENSMUST00000161884,ENSMUST00000162230,NM_133768,uc008zty.1_5end | ||
|cluster_id=chr5:130500150..130500227,- | |||
|description=CAGE_peak_1_at_Asl_5end | |description=CAGE_peak_1_at_Asl_5end | ||
|id=chr5:130500150..130500227,- | |id=chr5:130500150..130500227,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.83e-14!47;UBERON:0005172!1.38e-11!49;UBERON:0005173!1.38e-11!49;UBERON:0002417!1.38e-11!49;UBERON:0000916!1.38e-11!49;UBERON:0009854!4.19e-11!23;UBERON:0009856!4.19e-11!23;UBERON:0002365!5.47e-11!25;UBERON:0002330!5.47e-11!25;UBERON:0002107!6.74e-11!22;UBERON:0007499!6.74e-11!22;UBERON:0006925!6.74e-11!22;UBERON:0009497!6.74e-11!22;UBERON:0000015!6.74e-11!22;UBERON:0002423!6.74e-11!22;UBERON:0006235!6.74e-11!22;UBERON:0008835!6.74e-11!22;UBERON:0003894!6.74e-11!22;UBERON:0004161!6.74e-11!22;UBERON:0008836!6.74e-11!22;UBERON:0002100!6.06e-09!98;UBERON:0000160!1.20e-08!43;UBERON:0005177!3.06e-08!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,8.49e-15,45;UBERON:0003104,2.06e-13,61;UBERON:0009142,2.06e-13,61;UBERON:0005172,1.38e-11,49;UBERON:0005173,1.38e-11,49;UBERON:0002417,1.38e-11,49;UBERON:0000916,1.38e-11,49;UBERON:0009854,4.19e-11,23;UBERON:0009856,4.19e-11,23;UBERON:0002365,5.47e-11,25;UBERON:0002330,5.47e-11,25;UBERON:0002107,6.74e-11,22;UBERON:0007499,6.74e-11,22;UBERON:0006925,6.74e-11,22;UBERON:0009497,6.74e-11,22;UBERON:0000015,6.74e-11,22;UBERON:0002423,6.74e-11,22;UBERON:0006235,6.74e-11,22;UBERON:0008835,6.74e-11,22;UBERON:0003894,6.74e-11,22;UBERON:0004161,6.74e-11,22;UBERON:0008836,6.74e-11,22;UBERON:0002100,3.67e-10,90;UBERON:0005177,3.69e-09,79 | |||
|phase1_expression=8.64803774365887,28.6159834264276,26.8449551239826,13.0059610861937,13.5241847085514,18.6345991822198,15.4184342793047,8.65126267058561,4.50523910885334,1.17032263160997,2.05461561870606,2.15384829287408,6.50562773738582,7.34331380319578,1.66554880907831,4.25198061518635,2.79824751251259,4.41647031501533,5.21034847701807,2.97072756258621,22.1962987294292,10.0283860712894,7.83599367416806,19.679068003589,18.8115610475079,28.711598205751,27.9995297503399,20.2542958724736,14.6318032981408,14.617747526076,22.3947815761858,12.065582795733,17.8368788399525,0,15.0202842270663,14.4624141461888,12.2501613757421,26.3674927364252,18.7520482685712,28.7938059185589,15.8822501768374,16.3930916390027,24.2755176515577,8.81277725829041,10.1376931219515,12.114085642671,5.47673941043627,13.7355848519681,22.4079906389161,17.3042610176112,19.0381533410493,8.62515386189829,4.02678254538567,6.5282592781021,8.06625117941913,12.0911934936895,13.4670716771216,11.3447860301037,8.09265843438391,8.99284664762456,6.97214543856797,17.6199156675949,11.5608323494448,30.5965903875676,12.8552627133707,25.5772841380596,9.58720353658895,9.60545763303886,4.45865332926454,4.99521971827255,4.41682418837902,8.85518051651791,9.718215801871,4.40966877173835,6.22995561618536,2.75765635983006,6.60695285996332,10.4703617229854,12.9029487935245,8.70449499019279,11.5274430939036,7.29278718779464,11.4465029590566,9.56696437053856,13.4462458043593,6.48182888042069,8.39992916714707,10.4383689662168,6.81535739998656,8.76630097238712,9.85539261585705,508.510511295999,384.183803544879,449.033055442664,764.137066918459,712.362750484764,153.646195624137,5.96506129023202,7.79358013808606,5.65343319216544,9.15482228548423,14.115912515575,0,14.2213340630666,15.8038459938186,14.4415123320806,11.62706223534,306.355349286238,9.06282592765101,21.9694365815941,18.0424739836781,27.7063585264048,33.4392471021285,33.3097035621296,35.7469669692543,38.4539769468807,16.3148678704687,7.95296463059514,9.73071607144862,6.79420769779119,5.52103796150984,2.90925151881133,16.775258509631,4.9772735491963,6.49284791121711,12.517395705221,7.42853771936706,11.3981518888747,8.00542430560307,14.379901382863,7.32000964509802,6.28271760564322,6.60532416730651,5.62574006126727,11.2205544062162,11.0324058886075,13.7483141197927,16.048499208702,44.4792054843267,7.36546495602659,5.46505860443356,7.12696523743766,8.64298223065676,8.89158425230719,6.19132142277083,5.63700369253339,7.58983968933804,9.31332134660456,6.46703978798527,6.24050064553804,5.27853372491847,6.1374805079721,5.28289773528636,4.52727816478817,5.14455341019859,6.96619933864726,12.6398373716382,10.0365683774739,9.66155897945015,4.76389276831654,5.8631514995274,5.04173772090842,4.02466050494857,6.68998387941173,5.55361606394562,5.58081467400979,6.43856163359086,7.70651259623319,6.58239399653922,5.58169377868924,3.81023404865522,3.36259971078264,2.19550115291051,7.91817870686193,9.2527577368216,4.73361216944708,13.8775888853195,13.7514294665043,4.26576501070468,7.19933682767359,6.70110798874885,20.5717195115809,39.360913760542,51.5511446765035,15.1849299694244,49.4096864172033,46.9996840456504,43.1735544329297,43.0870632533256,8.98819408654222,14.0489732418551,13.541606581297,4.1726938209678,10.7393601853145,9.01661885384643,16.6994088833158,26.7654432291324,37.7330711009914,68.0425139457008,80.4475306488832,89.8032723252664,147.33621372263,487.071666304186,10.5112416601139,12.579775687245,12.5922782935518,18.4602710463538,26.047133253261,35.6476192493988,48.9083433666378,365.939206831255,102.136845705966,80.5101956553185,118.712962306253,141.041028247781,299.05339148938,345.878213270247,1415.97173520148,9.79191907883005,6.253216588426,5.0519142697028,4.75286240170527,4.22442446919304,8.87783164441623,6.42717830392237,7.02481132288076,7.25121662888479,6.42247599981447,4.9430978283821,8.84861899464985,10.7064688756855,10.5593812764503,21.1107797514981,18.4927932498361,13.769399644533,12.1412168374082,11.3990918891332,12.4244387787735,9.67216177722385,7.32165688892682,17.6684602873104,16.3984272604588,24.5582673415391,9.79772071605463,12.9223230967789,11.889214293131,13.3587531552715,17.5353514746787,13.4397844501818,3.53453448063988,10.2196861349953,12.4645922567079,7.98146100832523,14.5173708215831,17.2568679841952,13.595715624679,15.1161778482376,30.5540229204555,32.7785101097658,31.9732553861685,27.3933990758314,9.08834323693764,12.1209108650805,18.3301319602773,25.3004660579997,28.8779521094923,11.9153862013826,7.0223826672211,8.5376731296618,6.21577401591618,5.85222771019503,8.91844088010353,6.58196082408484,11.5696680663548,13.6109590676952,12.921756322693,20.7296694171664,8.73897140589844,6.78150592122803,6.45348296731268,13.130957840345,13.1312719796049,15.4484843413821,12.0526446306831,3.93003025835061,8.66824845445534,5.92622487583077,4.52084296811258,3.00727300986255,4.11800711771741,7.47905091972963,6.85762116385924,8.56839837587428,7.63736494412091,5.53587988766987,7.5228202836934,7.56037385752609,10.0362382086945,12.8833912610245,11.3286050963249,19.5062155511793,15.4436005770577,15.1649518751398,16.776161453347,5.07323644815771,9.41954240077066,9.76205093696876,18.8617652693726,22.086329814692,21.288471811838,21.5937319108187,22.3951541931594,11.7442465756796,6.03960302065015,8.3528701814781,4.74016680942267,11.5553372715394,9.0385642305048,8.18501184760109,9.13036147904155,6.75516606256301,9.13485416351763,7.97523446742717,7.77441664600737,7.08723301891499,7.4611377001262,6.72459377104292,8.08179469778768,11.103305707249,6.80191150845634,7.99149432146633,14.1747893442972,10.4088462145729,10.4322380777383,11.2609485270709,13.0037653229758,8.57473516316263,30.0943262421218,7.34177395402186,4.14292712856459,8.02053718815155,2.92150409984269,4.7955776383945,4.5323633843382,8.10027000278167,7.20513925158753,5.43770890781046,2.07104124700728,5.91587881229807,11.5717213286299,7.85374586469017,9.48116196566347,9.85181864351517,15.4428547098012,12.8903102124937,11.743998262617,12.194929964489,13.1402550117175,10.6461305953901,10.5630751176203,10.8624148665064,10.8842759088278,11.6019647290339,12.3836359733599,14.6014250690518,13.3107362119956,7.82963211526283,11.9231125308862,17.1434626192708,12.600782237313,12.1602456873134,12.6451382470126,15.0575008664529,13.8767956942349,11.5244622909847,10.2597187460759,13.8520196122779,10.1005608898393,11.8635018124174,13.7906275325789,15.1415485972785,10.8455788830176,10.4169569929816,6.99469618226249,18.4805970671873,26.644010701989,9.56441660344217,5.7353768971074,5.56482805489012 | |phase1_expression=8.64803774365887,28.6159834264276,26.8449551239826,13.0059610861937,13.5241847085514,18.6345991822198,15.4184342793047,8.65126267058561,4.50523910885334,1.17032263160997,2.05461561870606,2.15384829287408,6.50562773738582,7.34331380319578,1.66554880907831,4.25198061518635,2.79824751251259,4.41647031501533,5.21034847701807,2.97072756258621,22.1962987294292,10.0283860712894,7.83599367416806,19.679068003589,18.8115610475079,28.711598205751,27.9995297503399,20.2542958724736,14.6318032981408,14.617747526076,22.3947815761858,12.065582795733,17.8368788399525,0,15.0202842270663,14.4624141461888,12.2501613757421,26.3674927364252,18.7520482685712,28.7938059185589,15.8822501768374,16.3930916390027,24.2755176515577,8.81277725829041,10.1376931219515,12.114085642671,5.47673941043627,13.7355848519681,22.4079906389161,17.3042610176112,19.0381533410493,8.62515386189829,4.02678254538567,6.5282592781021,8.06625117941913,12.0911934936895,13.4670716771216,11.3447860301037,8.09265843438391,8.99284664762456,6.97214543856797,17.6199156675949,11.5608323494448,30.5965903875676,12.8552627133707,25.5772841380596,9.58720353658895,9.60545763303886,4.45865332926454,4.99521971827255,4.41682418837902,8.85518051651791,9.718215801871,4.40966877173835,6.22995561618536,2.75765635983006,6.60695285996332,10.4703617229854,12.9029487935245,8.70449499019279,11.5274430939036,7.29278718779464,11.4465029590566,9.56696437053856,13.4462458043593,6.48182888042069,8.39992916714707,10.4383689662168,6.81535739998656,8.76630097238712,9.85539261585705,508.510511295999,384.183803544879,449.033055442664,764.137066918459,712.362750484764,153.646195624137,5.96506129023202,7.79358013808606,5.65343319216544,9.15482228548423,14.115912515575,0,14.2213340630666,15.8038459938186,14.4415123320806,11.62706223534,306.355349286238,9.06282592765101,21.9694365815941,18.0424739836781,27.7063585264048,33.4392471021285,33.3097035621296,35.7469669692543,38.4539769468807,16.3148678704687,7.95296463059514,9.73071607144862,6.79420769779119,5.52103796150984,2.90925151881133,16.775258509631,4.9772735491963,6.49284791121711,12.517395705221,7.42853771936706,11.3981518888747,8.00542430560307,14.379901382863,7.32000964509802,6.28271760564322,6.60532416730651,5.62574006126727,11.2205544062162,11.0324058886075,13.7483141197927,16.048499208702,44.4792054843267,7.36546495602659,5.46505860443356,7.12696523743766,8.64298223065676,8.89158425230719,6.19132142277083,5.63700369253339,7.58983968933804,9.31332134660456,6.46703978798527,6.24050064553804,5.27853372491847,6.1374805079721,5.28289773528636,4.52727816478817,5.14455341019859,6.96619933864726,12.6398373716382,10.0365683774739,9.66155897945015,4.76389276831654,5.8631514995274,5.04173772090842,4.02466050494857,6.68998387941173,5.55361606394562,5.58081467400979,6.43856163359086,7.70651259623319,6.58239399653922,5.58169377868924,3.81023404865522,3.36259971078264,2.19550115291051,7.91817870686193,9.2527577368216,4.73361216944708,13.8775888853195,13.7514294665043,4.26576501070468,7.19933682767359,6.70110798874885,20.5717195115809,39.360913760542,51.5511446765035,15.1849299694244,49.4096864172033,46.9996840456504,43.1735544329297,43.0870632533256,8.98819408654222,14.0489732418551,13.541606581297,4.1726938209678,10.7393601853145,9.01661885384643,16.6994088833158,26.7654432291324,37.7330711009914,68.0425139457008,80.4475306488832,89.8032723252664,147.33621372263,487.071666304186,10.5112416601139,12.579775687245,12.5922782935518,18.4602710463538,26.047133253261,35.6476192493988,48.9083433666378,365.939206831255,102.136845705966,80.5101956553185,118.712962306253,141.041028247781,299.05339148938,345.878213270247,1415.97173520148,9.79191907883005,6.253216588426,5.0519142697028,4.75286240170527,4.22442446919304,8.87783164441623,6.42717830392237,7.02481132288076,7.25121662888479,6.42247599981447,4.9430978283821,8.84861899464985,10.7064688756855,10.5593812764503,21.1107797514981,18.4927932498361,13.769399644533,12.1412168374082,11.3990918891332,12.4244387787735,9.67216177722385,7.32165688892682,17.6684602873104,16.3984272604588,24.5582673415391,9.79772071605463,12.9223230967789,11.889214293131,13.3587531552715,17.5353514746787,13.4397844501818,3.53453448063988,10.2196861349953,12.4645922567079,7.98146100832523,14.5173708215831,17.2568679841952,13.595715624679,15.1161778482376,30.5540229204555,32.7785101097658,31.9732553861685,27.3933990758314,9.08834323693764,12.1209108650805,18.3301319602773,25.3004660579997,28.8779521094923,11.9153862013826,7.0223826672211,8.5376731296618,6.21577401591618,5.85222771019503,8.91844088010353,6.58196082408484,11.5696680663548,13.6109590676952,12.921756322693,20.7296694171664,8.73897140589844,6.78150592122803,6.45348296731268,13.130957840345,13.1312719796049,15.4484843413821,12.0526446306831,3.93003025835061,8.66824845445534,5.92622487583077,4.52084296811258,3.00727300986255,4.11800711771741,7.47905091972963,6.85762116385924,8.56839837587428,7.63736494412091,5.53587988766987,7.5228202836934,7.56037385752609,10.0362382086945,12.8833912610245,11.3286050963249,19.5062155511793,15.4436005770577,15.1649518751398,16.776161453347,5.07323644815771,9.41954240077066,9.76205093696876,18.8617652693726,22.086329814692,21.288471811838,21.5937319108187,22.3951541931594,11.7442465756796,6.03960302065015,8.3528701814781,4.74016680942267,11.5553372715394,9.0385642305048,8.18501184760109,9.13036147904155,6.75516606256301,9.13485416351763,7.97523446742717,7.77441664600737,7.08723301891499,7.4611377001262,6.72459377104292,8.08179469778768,11.103305707249,6.80191150845634,7.99149432146633,14.1747893442972,10.4088462145729,10.4322380777383,11.2609485270709,13.0037653229758,8.57473516316263,30.0943262421218,7.34177395402186,4.14292712856459,8.02053718815155,2.92150409984269,4.7955776383945,4.5323633843382,8.10027000278167,7.20513925158753,5.43770890781046,2.07104124700728,5.91587881229807,11.5717213286299,7.85374586469017,9.48116196566347,9.85181864351517,15.4428547098012,12.8903102124937,11.743998262617,12.194929964489,13.1402550117175,10.6461305953901,10.5630751176203,10.8624148665064,10.8842759088278,11.6019647290339,12.3836359733599,14.6014250690518,13.3107362119956,7.82963211526283,11.9231125308862,17.1434626192708,12.600782237313,12.1602456873134,12.6451382470126,15.0575008664529,13.8767956942349,11.5244622909847,10.2597187460759,13.8520196122779,10.1005608898393,11.8635018124174,13.7906275325789,15.1415485972785,10.8455788830176,10.4169569929816,6.99469618226249,18.4805970671873,26.644010701989,9.56441660344217,5.7353768971074,5.56482805489012 | ||
|short_description=p1@Asl | |short_description=p1@Asl | ||
}} | }} |
Latest revision as of 22:58, 1 October 2015
Short description: | p1@Asl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Asl_5end |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | 0bp_to_ENSMUST00000161640, ENSMUST00000161884, ENSMUST00000162230, NM_133768, uc008zty.1_5end |
EntrezGene: | Asl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 8.49e-15 | 45 |
mesenchyme | 2.06e-13 | 61 |
entire embryonic mesenchyme | 2.06e-13 | 61 |
abdomen element | 1.38e-11 | 49 |
abdominal segment element | 1.38e-11 | 49 |
abdominal segment of trunk | 1.38e-11 | 49 |
abdomen | 1.38e-11 | 49 |
digestive tract diverticulum | 4.19e-11 | 23 |
sac | 4.19e-11 | 23 |
exocrine gland | 5.47e-11 | 25 |
exocrine system | 5.47e-11 | 25 |
liver | 6.74e-11 | 22 |
epithelial sac | 6.74e-11 | 22 |
digestive gland | 6.74e-11 | 22 |
epithelium of foregut-midgut junction | 6.74e-11 | 22 |
anatomical boundary | 6.74e-11 | 22 |
hepatobiliary system | 6.74e-11 | 22 |
foregut-midgut junction | 6.74e-11 | 22 |
hepatic diverticulum | 6.74e-11 | 22 |
liver primordium | 6.74e-11 | 22 |
septum transversum | 6.74e-11 | 22 |
liver bud | 6.74e-11 | 22 |
trunk | 3.67e-10 | 90 |
trunk region element | 3.69e-09 | 79 |