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FFCP PHASE1:Mm9::chrX:61530112..61530177,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:61530112..61530177,-
|DHSsupport=NA
|short_description=p1@Slitrk4
|DPIdataset=NA
|description=CAGE_peak_1_at_Slitrk4_5end
|association_with_transcript=0bp_to_ENSMUST00000069926,ENSMUST00000114679,NM_178740,uc009tio.1,uc009tip.1_5end
|EntrezGene=245446
|EntrezGene=245446
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q810B8,Q149A4
|UniProt=Q810B8,Q149A4
|association_with_transcript=0bp_to_ENSMUST00000069926,ENSMUST00000114679,NM_178740,uc009tio.1,uc009tip.1_5end
|cluster_id=chrX:61530112..61530177,-
|description=CAGE_peak_1_at_Slitrk4_5end
|id=chrX:61530112..61530177,-
|ontology_enrichment_celltype=CL:0000540!2.58e-07!33;CL:0000047!2.58e-07!33;CL:0000031!2.58e-07!33;CL:0000404!2.58e-07!33;CL:0000117!3.43e-07!23;CL:0000337!3.43e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.43e-07,23;CL:0000337,3.43e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.13e-14!73;UBERON:0005743!4.13e-14!73;UBERON:0002346!6.78e-14!71;UBERON:0003075!6.78e-14!71;UBERON:0007284!6.78e-14!71;UBERON:0000073!1.38e-13!75;UBERON:0001016!1.38e-13!75;UBERON:0001049!2.50e-13!52;UBERON:0005068!2.50e-13!52;UBERON:0006241!2.50e-13!52;UBERON:0007135!2.50e-13!52;UBERON:0000955!1.46e-12!50;UBERON:0006238!1.46e-12!50;UBERON:0002020!3.16e-12!34;UBERON:0000033!3.86e-12!63;UBERON:0002616!5.52e-12!49;UBERON:0004121!2.20e-11!102;UBERON:0000924!2.20e-11!102;UBERON:0006601!2.20e-11!102;UBERON:0003056!5.93e-10!49;UBERON:0002791!9.11e-10!29;UBERON:0003528!9.11e-10!29;UBERON:0001893!9.11e-10!29;UBERON:0003080!1.83e-09!40;UBERON:0002780!6.70e-09!39;UBERON:0001890!6.70e-09!39;UBERON:0006240!6.70e-09!39;UBERON:0002021!3.44e-08!10;UBERON:0000411!3.44e-08!10;UBERON:0001950!3.44e-08!10;UBERON:0000468!2.40e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.94e-19,92;UBERON:0000073,3.47e-15,54;UBERON:0001017,1.47e-14,73;UBERON:0002346,2.38e-14,64;UBERON:0003075,2.38e-14,64;UBERON:0007284,2.38e-14,64;UBERON:0001049,5.99e-14,52;UBERON:0005068,5.99e-14,52;UBERON:0006241,5.99e-14,52;UBERON:0007135,5.99e-14,52;UBERON:0001016,1.36e-13,75;UBERON:0002020,2.97e-13,34;UBERON:0000955,2.72e-11,47;UBERON:0006238,2.72e-11,47;UBERON:0010371,4.83e-11,73;UBERON:0002616,1.12e-10,46;UBERON:0004121,1.45e-10,95;UBERON:0000924,1.45e-10,95;UBERON:0006601,1.45e-10,95;UBERON:0003528,1.85e-10,29;UBERON:0002791,1.85e-10,29;UBERON:0001893,1.85e-10,29;UBERON:0003056,2.10e-09,49;UBERON:0003080,2.73e-09,40;UBERON:0002021,3.53e-09,10;UBERON:0000411,3.53e-09,10;UBERON:0001950,3.53e-09,10;UBERON:0002780,1.12e-08,39;UBERON:0001890,1.12e-08,39;UBERON:0006240,1.12e-08,39;UBERON:0002619,2.82e-07,17;UBERON:0000956,5.58e-07,21;UBERON:0001869,5.58e-07,21;UBERON:0000203,5.58e-07,21
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,3.1739458756322,2.53532561402472,0,0,0,0,0,0,0,1.03689612308478,0.405017814995072,1.05162480675691,6.56997264128748,5.74258206474195,1.95985278743926,0.766763768145891,1.83843757322004,24.2254938198655,12.6410464704336,18.1255709242367,1.71452174049252,3.47653045689157,3.64639359389732,9.77140496504833,14.069065250792,16.1966142643419,14.142172102736,13.810053037513,9.69277118291563,0.075726193333184,0.302286240427142,0,0,0,0.539703191637817,0,0,2.24711072210803,0,0,0,6.19711047017394,0,0,0,0,0.253359865475099,0,1.25602267690966,0,0,2.25530924795977,3.65358573974569,2.99800146432876,1.95939432718409,2.4693628498498,0,0,1.3013942122792,0,5.3383060482645,0.220841518460394,0.484875253135222,0,37.475942017478,35.3964934514739,0,0,0,0,32.8041500296562,26.5350349634803,8.04187853522332,33.0266208365325,34.2658712822643,15.3763152974074,24.1739481970959,8.65634592727688,0.248813941220186,0,0.210441855886474,1.95180664444056,0.459804208866946,1.98068342785884,2.41127708537144,2.99360596265843,3.71529788826064,1.78033276663485,1.81092359517311,0,1.70195472151037,0.703804496655795,2.19195732427575,1.94633074457919,1.0447564995665,0.61734640922383,2.9855140022774,0,0,0,4.55676699578104,7.73935997937617,10.4435995647389,11.3637473080901,10.8220327461072,10.0273623376796,9.06882384526591,4.82892122519315,7.58974725386602,8.06343264576054,5.08919138645195,3.89130285820108,2.63159977365598,4.17145219052996,1.8788898626452,30.7023324903626,11.0107935245834,0,0,1.91959425481711,3.48355007790658,4.38149368495117,1.61346819698674,1.11189021922435,1.33157938278791,0,1.97638745668813,0.502670417600539,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0.189667900953082,1.82797620175566,0,1.01825663922657,0.387904974335251,0.140271639780637,0.126473074248515,0.442830443938806,0.627994911365499,0.493588655687202,0,0.333690211432188,0.786235980452812,0,0,0.241177159752417,0.50925170356284,0,0,0,0,0.372140947668503,0,0,0,0,0.554259570499814,1.32643988239339,0.977789858652155,1.01847051465113,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0,0.433947175744535,0,0,0.491764273019036,0.275936746304732,20.871576698413,20.2776217804511,0,1.00988370881749,2.2085575359138,1.17131623288992,2.36965737506079,0.238968797952552,1.11399337041197,0.566153061577665,2.83367491172426,4.09158201075837,2.37172666767914,25.3843839973228,0.283880170416537,5.34196811001766,7.32991317091092,0.989820737835213,0,1.69946445308487,1.209294227859,1.69744571780308,2.06711325016541,2.76691633149535,2.06742634534577,1.81766864738753,2.13898427030833,0.632073515871632,0,0,0,1.44048875225048,0.517434735131018,1.71469628025274,0.709360934569094,0.713475270408282,1.81003922662333,0,0,0,0,0,0.484393280087717,0.361877549568935,0,0,0.582961673259701,22.4364615432717,0,2.88941615148511,0.555583582109135,0,0,0,0,0,0,0.954670618015114,1.58167996790568,1.62655573701479,1.40406943068342,0.836353184057875,2.18362563746178,0,0.41326727862668,0,0.129614973291793,0,0,0.598066184175915,0.992750942742586,2.13896307178452,1.54991788173277,2.02747350588934,1.29092962510329,0.39061315453185,0.209718688851422,0,0,0,3.04087822935246,1.23253148597793,0.25984164595559,0.358053391334963,0.79472541912506,0.240390899039938,0,0,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,5.10567692760349,1.79427713218951,2.3503846290971,0.19318959403219,0,0.183151624267265,0,0,25.413832917768,29.9211403729665,19.4784474569395,21.1379414282736,29.4585483501376,37.0143009720953,39.1513050134447,33.3237690385923,43.0485288534994,34.1721805756201,0.726511433089237,1.19707462020309,2.56100408631201,3.40349403895612,2.93458427679175,1.65459157605013,6.88964856185007,6.59312183164461,5.13470735346904,6.06473308233114,5.0695859978048,5.65879024158229,3.65201879132541,3.90553429669703,4.07791829584854,3.33405583898152,6.02598494913249,4.24400285020151,4.94503080963968,4.85756436443511,2.40008476669791,6.74408063405482,3.57654284920981,5.52316383202848,4.51725025993587,3.9768865709088,3.84148743032822,3.41990624869196,6.3827933507555,4.48913817326191,4.27086065247027,3.54616136552028,2.86461730218783,3.87342102964915,4.24394544158511,2.99772693525535,2.8071793013449,3.00819475667618,2.48674831689496,2.64709702943419,4.17362104116759
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43937983461316,3.1739458756322,2.53532561402472,0,0,0,0,0,0,0,1.03689612308478,0.405017814995072,1.05162480675691,6.56997264128748,5.74258206474195,1.95985278743926,0.766763768145891,1.83843757322004,24.2254938198655,12.6410464704336,18.1255709242367,1.71452174049252,3.47653045689157,3.64639359389732,9.77140496504833,14.069065250792,16.1966142643419,14.142172102736,13.810053037513,9.69277118291563,0.075726193333184,0.302286240427142,0,0,0,0.539703191637817,0,0,2.24711072210803,0,0,0,6.19711047017394,0,0,0,0,0.253359865475099,0,1.25602267690966,0,0,2.25530924795977,3.65358573974569,2.99800146432876,1.95939432718409,2.4693628498498,0,0,1.3013942122792,0,5.3383060482645,0.220841518460394,0.484875253135222,0,37.475942017478,35.3964934514739,0,0,0,0,32.8041500296562,26.5350349634803,8.04187853522332,33.0266208365325,34.2658712822643,15.3763152974074,24.1739481970959,8.65634592727688,0.248813941220186,0,0.210441855886474,1.95180664444056,0.459804208866946,1.98068342785884,2.41127708537144,2.99360596265843,3.71529788826064,1.78033276663485,1.81092359517311,0,1.70195472151037,0.703804496655795,2.19195732427575,1.94633074457919,1.0447564995665,0.61734640922383,2.9855140022774,0,0,0,4.55676699578104,7.73935997937617,10.4435995647389,11.3637473080901,10.8220327461072,10.0273623376796,9.06882384526591,4.82892122519315,7.58974725386602,8.06343264576054,5.08919138645195,3.89130285820108,2.63159977365598,4.17145219052996,1.8788898626452,30.7023324903626,11.0107935245834,0,0,1.91959425481711,3.48355007790658,4.38149368495117,1.61346819698674,1.11189021922435,1.33157938278791,0,1.97638745668813,0.502670417600539,0.596869416123452,0.38992817423824,0,0,0.199141273254367,0.189667900953082,1.82797620175566,0,1.01825663922657,0.387904974335251,0.140271639780637,0.126473074248515,0.442830443938806,0.627994911365499,0.493588655687202,0,0.333690211432188,0.786235980452812,0,0,0.241177159752417,0.50925170356284,0,0,0,0,0.372140947668503,0,0,0,0,0.554259570499814,1.32643988239339,0.977789858652155,1.01847051465113,0.938760993154008,0.167506257441816,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0,0,0,0.433947175744535,0,0,0.491764273019036,0.275936746304732,20.871576698413,20.2776217804511,0,1.00988370881749,2.2085575359138,1.17131623288992,2.36965737506079,0.238968797952552,1.11399337041197,0.566153061577665,2.83367491172426,4.09158201075837,2.37172666767914,25.3843839973228,0.283880170416537,5.34196811001766,7.32991317091092,0.989820737835213,0,1.69946445308487,1.209294227859,1.69744571780308,2.06711325016541,2.76691633149535,2.06742634534577,1.81766864738753,2.13898427030833,0.632073515871632,0,0,0,1.44048875225048,0.517434735131018,1.71469628025274,0.709360934569094,0.713475270408282,1.81003922662333,0,0,0,0,0,0.484393280087717,0.361877549568935,0,0,0.582961673259701,22.4364615432717,0,2.88941615148511,0.555583582109135,0,0,0,0,0,0,0.954670618015114,1.58167996790568,1.62655573701479,1.40406943068342,0.836353184057875,2.18362563746178,0,0.41326727862668,0,0.129614973291793,0,0,0.598066184175915,0.992750942742586,2.13896307178452,1.54991788173277,2.02747350588934,1.29092962510329,0.39061315453185,0.209718688851422,0,0,0,3.04087822935246,1.23253148597793,0.25984164595559,0.358053391334963,0.79472541912506,0.240390899039938,0,0,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,0,5.10567692760349,1.79427713218951,2.3503846290971,0.19318959403219,0,0.183151624267265,0,0,25.413832917768,29.9211403729665,19.4784474569395,21.1379414282736,29.4585483501376,37.0143009720953,39.1513050134447,33.3237690385923,43.0485288534994,34.1721805756201,0.726511433089237,1.19707462020309,2.56100408631201,3.40349403895612,2.93458427679175,1.65459157605013,6.88964856185007,6.59312183164461,5.13470735346904,6.06473308233114,5.0695859978048,5.65879024158229,3.65201879132541,3.90553429669703,4.07791829584854,3.33405583898152,6.02598494913249,4.24400285020151,4.94503080963968,4.85756436443511,2.40008476669791,6.74408063405482,3.57654284920981,5.52316383202848,4.51725025993587,3.9768865709088,3.84148743032822,3.41990624869196,6.3827933507555,4.48913817326191,4.27086065247027,3.54616136552028,2.86461730218783,3.87342102964915,4.24394544158511,2.99772693525535,2.8071793013449,3.00819475667618,2.48674831689496,2.64709702943419,4.17362104116759
|short_description=p1@Slitrk4
}}
}}

Latest revision as of 22:53, 1 October 2015

Short description:p1@Slitrk4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slitrk4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000069926, ENSMUST00000114679, NM_178740, uc009tio.1, uc009tip.1_5end
EntrezGene:Slitrk4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slitrk4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B237.48
cerebellum, neonate N30.CNhs11135.1395-42I235.40
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A432.80
corpus striatum, adult.CNhs10487.19-21D826.54
corpus striatum, neonate N00.CNhs11226.630-43F18.04
cortex, adult.CNhs10473.12-14D533.03
cortex, neonate N30.CNhs11107.1392-42F234.27
diencephalon, adult.CNhs10482.20-12F215.38
diencephalon, neonate N30.CNhs11201.1388-42B224.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.66
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I910.44
heart, embryo E14.CNhs10597.403-26D411.36
heart, embryo E15.CNhs11017.431-16C810.82
heart, embryo E16.CNhs11021.457-17C610.03
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E37.59
heart, neonate N03.CNhs11221.1349-25I28.06
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G13.89
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E830.70
hippocampus, neonate N00.CNhs11228.627-43G111.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C220.87
medulla oblongata, neonate N30.CNhs11200.1396-42A320.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I925.38
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I47.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C922.44
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.41
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D721.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A429.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.17
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.43e-0723
neuroblast (sensu Vertebrata)3.43e-0723

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.94e-1992
regional part of nervous system3.47e-1554
central nervous system1.47e-1473
neurectoderm2.38e-1464
neural plate2.38e-1464
presumptive neural plate2.38e-1464
neural tube5.99e-1452
neural rod5.99e-1452
future spinal cord5.99e-1452
neural keel5.99e-1452
nervous system1.36e-1375
gray matter2.97e-1334
brain2.72e-1147
future brain2.72e-1147
ecto-epithelium4.83e-1173
regional part of brain1.12e-1046
ectoderm-derived structure1.45e-1095
ectoderm1.45e-1095
presumptive ectoderm1.45e-1095
brain grey matter1.85e-1029
regional part of telencephalon1.85e-1029
telencephalon1.85e-1029
pre-chordal neural plate2.10e-0949
anterior neural tube2.73e-0940
occipital lobe3.53e-0910
visual cortex3.53e-0910
neocortex3.53e-0910
regional part of forebrain1.12e-0839
forebrain1.12e-0839
future forebrain1.12e-0839
regional part of cerebral cortex2.82e-0717
cerebral cortex5.58e-0721
cerebral hemisphere5.58e-0721
pallium5.58e-0721
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