Personal tools

FFCP PHASE1:Mm9::chr3:32716504..32716527,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr3:32716504..32716527,+ |short_description=p3@Usp13 |description=CAGE_peak_3_at_Usp13_5end |association_with_transcript=11bp_to_ENSMUST00000108228_5end |Entr...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:32716504..32716527,+
|DHSsupport=NA
|short_description=p3@Usp13
|DPIdataset=NA
|description=CAGE_peak_3_at_Usp13_5end
|association_with_transcript=11bp_to_ENSMUST00000108228_5end
|EntrezGene=72607
|EntrezGene=72607
|HGNC=
|HGNC=
|MCL_coexpression_id=35
|TSSclassifier=NA
|UniProt=D3YYG7
|UniProt=D3YYG7
|association_with_transcript=11bp_to_ENSMUST00000108228_5end
|cluster_id=chr3:32716504..32716527,+
|description=CAGE_peak_3_at_Usp13_5end
|id=chr3:32716504..32716527,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.20e-09!52;UBERON:0005068!3.20e-09!52;UBERON:0006241!3.20e-09!52;UBERON:0007135!3.20e-09!52;UBERON:0000025!3.33e-09!114;UBERON:0007100!4.53e-09!18;UBERON:0000948!4.53e-09!18;UBERON:0005498!4.53e-09!18;UBERON:0004140!4.53e-09!18;UBERON:0009881!4.53e-09!18;UBERON:0004141!4.53e-09!18;UBERON:0003084!4.53e-09!18;UBERON:0007005!4.53e-09!18;UBERON:0004139!4.53e-09!18;UBERON:0004291!4.53e-09!18;UBERON:0001017!5.40e-09!73;UBERON:0005743!5.40e-09!73;UBERON:0002346!7.52e-09!71;UBERON:0003075!7.52e-09!71;UBERON:0007284!7.52e-09!71;UBERON:0000955!1.16e-08!50;UBERON:0006238!1.16e-08!50;UBERON:0000073!1.38e-08!75;UBERON:0001016!1.38e-08!75;UBERON:0000033!1.97e-08!63;UBERON:0002616!3.33e-08!49;UBERON:0004111!3.43e-08!122;UBERON:0004121!6.46e-08!102;UBERON:0000924!6.46e-08!102;UBERON:0006601!6.46e-08!102;UBERON:0004535!7.11e-08!23;UBERON:0001009!7.11e-08!23;UBERON:0002020!7.67e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0010314,8.83e-12,92;UBERON:0007100,7.42e-10,18;UBERON:0000948,7.42e-10,18;UBERON:0005498,7.42e-10,18;UBERON:0004140,7.42e-10,18;UBERON:0009881,7.42e-10,18;UBERON:0004141,7.42e-10,18;UBERON:0003084,7.42e-10,18;UBERON:0007005,7.42e-10,18;UBERON:0004139,7.42e-10,18;UBERON:0004291,7.42e-10,18;UBERON:0004535,1.81e-08,23;UBERON:0001009,1.81e-08,23;UBERON:0000025,1.96e-08,114;UBERON:0000073,9.52e-08,54;UBERON:0004111,3.29e-07,122;UBERON:0001049,3.86e-07,52;UBERON:0005068,3.86e-07,52;UBERON:0006241,3.86e-07,52;UBERON:0007135,3.86e-07,52;UBERON:0002346,8.02e-07,64;UBERON:0003075,8.02e-07,64;UBERON:0007284,8.02e-07,64
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.72340783073175,1.28482726513177,1.56478268869608,1.30815093828268,0.219686182734472,0,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,2.83243045203437,1.5869729378161,0.633831403506179,1.69422266034566,0,0,0,0,0.599200221036809,1.15265491596466,1.45165457231869,0.810035629990144,0.630974884054146,2.28520787523043,1.76694832761291,0.979926393719632,0.862609239164127,0.919218786610021,2.20231761998777,3.44755812830007,1.99688493233117,3.16527090552465,1.64677758484337,1.56274011167028,1.95428099300967,2.25105044012672,1.83357897332172,2.06240009831567,3.98640706237488,2.42319279572891,0.227178579999552,0.453429360640713,0,0,0,0.539703191637817,0,0,5.61777680527007,1.02258193546835,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0.91347103775248,0,0.593768556259299,1.56136794089522,0.608930956624282,0.230615497256059,0.60289056221049,0.117588707135705,0.628332956648377,0,0.578397427679647,2.65383165584962,6.63244084784378,7.50861162765338,3.39412677194655,0,4.09893115816166,3.97948742945565,0,0,0,0,3.89455662452539,0.915001205637253,0.879580464790051,3.65031072403781,2.30143911597297,2.49345653471472,3.24482526135515,1.2220723662038,2.23932547098167,0,1.05220927943237,0.910843100738926,0.459804208866946,1.26043490863744,1.05493372485001,1.29269348387523,0.896796041993948,1.49922759295566,3.10444044886819,0.646703978798527,1.13463648100692,1.05570674498369,0.43839146485515,1.39023624612799,0.348252166522167,1.23469281844766,0.995171334092466,0,0,0,6.00664740352955,10.0846205791871,9.18316513451176,7.33908680314152,8.65762619688577,11.1072321278912,9.99895962426754,12.3405764643825,9.69152341647507,10.3672705445493,11.8200574136949,22.7803354823855,25.0001978497318,16.9053588774109,15.9705638324842,1.05144974282064,1.13195073617213,0,0.264450566663544,1.2797295032114,1.16118335930219,1.15980715189884,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.569003702859245,1.14248512609729,1.1270773567308,2.03651327845314,0.969762435838129,0.561086559122548,0.379419222745544,0.147610147979602,0,0.246794327843601,0,0.333690211432188,0,0.449724224769707,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.717589654087649,0,0.184753190166605,1.32643988239339,1.62964976442026,1.35796068620151,1.64283173801951,1.67506257441816,1.19021820443007,0.390267295715598,1.26108115284953,0.44292937929755,1.2756381492599,1.3109065177259,1.03610989119537,0.433947175744535,0,0,0,0.275936746304732,3.69266356971921,3.28192722458169,0.491804836130026,24.4896799388242,0.631016438832513,1.17131623288992,1.07711698866399,0.716906393857656,0.445597348164788,0.283076530788832,0.404810701674894,1.16902343164525,0,4.4984984299053,1.41940085208269,1.95872164033981,1.62886959353576,2.8044920905331,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.36175842301515,1.26042765821917,0.646793418913773,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,4.28704257647848,1.45317984026315,1.26657142349127,0.716234064018819,0.820704498725306,0,2.96680483216816,0,1.23832120777933,0.185194527369712,0,0,0,0,0,0,0.954670618015114,1.10717597753397,0.813277868507395,0.756037385752609,0.418176592028937,0.436725127492355,0.539457385539283,0.991841468704031,1.30877970992015,0.388844919875379,0,0,1.19613236835183,1.48912641411388,0.388902376688095,1.42075805825504,0.675824501963113,0.821500670520278,0.5208175393758,0.314578033277133,0.483168241652012,2.30424005006292,0,1.01362607645082,0.205421914329655,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.0974578807397524,0.0962118416403295,0,15.4176660858344,0.443971906748129,0.0897138566094757,0,0.772758376128762,1.50145980360946,1.09890974560359,0.643105137237198,0,2.82375921308533,3.68260189205742,4.01026859407578,3.09335728218638,2.05524755931193,3.0215755895588,1.35004500046361,3.60256962579376,4.98456649882625,3.62432218226274,1.24544817101012,1.59609949360412,1.53660245178721,1.94485373654635,0.838452650511929,1.47074806760011,1.77797382241292,2.26638562962784,2.24643446714271,1.01078884705519,2.02783439912192,2.26351609663291,2.52832070168682,2.88113185821912,2.23998328926892,2.38146845641537,2.31768651889711,3.47236596834669,2.06042950401653,3.53277408322554,1.71434626192708,3.37204031702741,2.14592570952589,3.48831399917588,2.54095327121393,3.21535509988371,2.0122077016005,2.10455769150274,2.71608227691724,1.68342681497322,2.01679530811096,2.46261205938909,2.04615521584845,2.63392630016142,3.2794123866794,1.99848462350357,2.33931608445408,1.93383948643468,4.20834330551455,5.29419405886837,6.95603506861264
|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,1.72340783073175,1.28482726513177,1.56478268869608,1.30815093828268,0.219686182734472,0,0.699932108126813,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,2.83243045203437,1.5869729378161,0.633831403506179,1.69422266034566,0,0,0,0,0.599200221036809,1.15265491596466,1.45165457231869,0.810035629990144,0.630974884054146,2.28520787523043,1.76694832761291,0.979926393719632,0.862609239164127,0.919218786610021,2.20231761998777,3.44755812830007,1.99688493233117,3.16527090552465,1.64677758484337,1.56274011167028,1.95428099300967,2.25105044012672,1.83357897332172,2.06240009831567,3.98640706237488,2.42319279572891,0.227178579999552,0.453429360640713,0,0,0,0.539703191637817,0,0,5.61777680527007,1.02258193546835,0.519572009205738,0.35333957451034,0,0,0,0,0,0,0,0.91347103775248,0,0.593768556259299,1.56136794089522,0.608930956624282,0.230615497256059,0.60289056221049,0.117588707135705,0.628332956648377,0,0.578397427679647,2.65383165584962,6.63244084784378,7.50861162765338,3.39412677194655,0,4.09893115816166,3.97948742945565,0,0,0,0,3.89455662452539,0.915001205637253,0.879580464790051,3.65031072403781,2.30143911597297,2.49345653471472,3.24482526135515,1.2220723662038,2.23932547098167,0,1.05220927943237,0.910843100738926,0.459804208866946,1.26043490863744,1.05493372485001,1.29269348387523,0.896796041993948,1.49922759295566,3.10444044886819,0.646703978798527,1.13463648100692,1.05570674498369,0.43839146485515,1.39023624612799,0.348252166522167,1.23469281844766,0.995171334092466,0,0,0,6.00664740352955,10.0846205791871,9.18316513451176,7.33908680314152,8.65762619688577,11.1072321278912,9.99895962426754,12.3405764643825,9.69152341647507,10.3672705445493,11.8200574136949,22.7803354823855,25.0001978497318,16.9053588774109,15.9705638324842,1.05144974282064,1.13195073617213,0,0.264450566663544,1.2797295032114,1.16118335930219,1.15980715189884,1.00841762311671,0.444756087689741,0.380451252225118,0.949058123089023,0,0.502670417600539,0.596869416123452,0.38992817423824,0,0.216138049874694,0,0.569003702859245,1.14248512609729,1.1270773567308,2.03651327845314,0.969762435838129,0.561086559122548,0.379419222745544,0.147610147979602,0,0.246794327843601,0,0.333690211432188,0,0.449724224769707,0,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0.717589654087649,0,0.184753190166605,1.32643988239339,1.62964976442026,1.35796068620151,1.64283173801951,1.67506257441816,1.19021820443007,0.390267295715598,1.26108115284953,0.44292937929755,1.2756381492599,1.3109065177259,1.03610989119537,0.433947175744535,0,0,0,0.275936746304732,3.69266356971921,3.28192722458169,0.491804836130026,24.4896799388242,0.631016438832513,1.17131623288992,1.07711698866399,0.716906393857656,0.445597348164788,0.283076530788832,0.404810701674894,1.16902343164525,0,4.4984984299053,1.41940085208269,1.95872164033981,1.62886959353576,2.8044920905331,0,0.485561272309963,0.604647113929502,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.36175842301515,1.26042765821917,0.646793418913773,0.428674070063185,0.177340233642274,0.356737635204141,0.493647061806363,0.608929898229199,0.23467170806371,0.21183207086382,0.220528398054962,4.28704257647848,1.45317984026315,1.26657142349127,0.716234064018819,0.820704498725306,0,2.96680483216816,0,1.23832120777933,0.185194527369712,0,0,0,0,0,0,0.954670618015114,1.10717597753397,0.813277868507395,0.756037385752609,0.418176592028937,0.436725127492355,0.539457385539283,0.991841468704031,1.30877970992015,0.388844919875379,0,0,1.19613236835183,1.48912641411388,0.388902376688095,1.42075805825504,0.675824501963113,0.821500670520278,0.5208175393758,0.314578033277133,0.483168241652012,2.30424005006292,0,1.01362607645082,0.205421914329655,0.389762468933385,0,0,0.120195449519969,0.147689527174577,0,0.15241361331,0,0.0974578807397524,0.0962118416403295,0,15.4176660858344,0.443971906748129,0.0897138566094757,0,0.772758376128762,1.50145980360946,1.09890974560359,0.643105137237198,0,2.82375921308533,3.68260189205742,4.01026859407578,3.09335728218638,2.05524755931193,3.0215755895588,1.35004500046361,3.60256962579376,4.98456649882625,3.62432218226274,1.24544817101012,1.59609949360412,1.53660245178721,1.94485373654635,0.838452650511929,1.47074806760011,1.77797382241292,2.26638562962784,2.24643446714271,1.01078884705519,2.02783439912192,2.26351609663291,2.52832070168682,2.88113185821912,2.23998328926892,2.38146845641537,2.31768651889711,3.47236596834669,2.06042950401653,3.53277408322554,1.71434626192708,3.37204031702741,2.14592570952589,3.48831399917588,2.54095327121393,3.21535509988371,2.0122077016005,2.10455769150274,2.71608227691724,1.68342681497322,2.01679530811096,2.46261205938909,2.04615521584845,2.63392630016142,3.2794123866794,1.99848462350357,2.33931608445408,1.93383948643468,4.20834330551455,5.29419405886837,6.95603506861264
|short_description=p3@Usp13
}}
}}

Latest revision as of 22:52, 1 October 2015

Short description:p3@Usp13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Usp13_5end
Coexpression cluster:MCL_coexpression_mm9:35
Association with transcript: 11bp_to_ENSMUST00000108228_5end
EntrezGene:Usp13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Usp13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.62
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.26
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A67.51
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E96.01
heart, embryo E12.CNhs11015.353-12F510.08
heart, embryo E13.CNhs11013.376-3I99.18
heart, embryo E14.CNhs10597.403-26D47.34
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C611.11
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E39.69
heart, neonate N03.CNhs11221.1349-25I210.37
heart, neonate N10.CNhs11118.749-24G111.82
heart, neonate N16.CNhs11209.782-15G122.78
heart, neonate N20.CNhs11127.821-26I625.00
heart, neonate N25.CNhs11196.1351-25D316.91
heart, neonate N30.CNhs11202.1390-42D215.97
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.68
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C224.49
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B415.42
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D15.29
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:32716504..32716527,%2B&oldid=4326530"