FFCP PHASE1:Mm9::chrX:58369534..58369572,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=331424 | |EntrezGene=331424 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000096426,ENSMUST00000125930,ENSMUST00000137153,ENSMUST00000140023,ENSMUST00000144853,NR_030706,uc009tih.2_5end | |association_with_transcript=0bp_to_ENSMUST00000096426,ENSMUST00000125930,ENSMUST00000137153,ENSMUST00000140023,ENSMUST00000144853,NR_030706,uc009tih.2_5end | ||
|cluster_id=chrX:58369534..58369572,+ | |||
|description=CAGE_peak_1_at_C230004F18Rik_5end | |description=CAGE_peak_1_at_C230004F18Rik_5end | ||
|id=chrX:58369534..58369572,+ | |id=chrX:58369534..58369572,+ | ||
|ontology_enrichment_celltype=CL:0000540!3.86e-11!33;CL:0000047!3.86e-11!33;CL:0000031!3.86e-11!33;CL:0000404!3.86e-11!33;CL:0000117!6.76e-11!23;CL:0000337!6.76e-11!23;CL:0000221!9.20e-10!44;CL:0000133!9.20e-10!44;CL:0002319!9.71e-10!43;CL:0000393!2.19e-07!39;CL:0000211!2.19e-07!39 | |ontology_enrichment_celltype=CL:0000540!3.86e-11!33;CL:0000047!3.86e-11!33;CL:0000031!3.86e-11!33;CL:0000404!3.86e-11!33;CL:0000117!6.76e-11!23;CL:0000337!6.76e-11!23;CL:0000221!9.20e-10!44;CL:0000133!9.20e-10!44;CL:0002319!9.71e-10!43;CL:0000393!2.19e-07!39;CL:0000211!2.19e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-12,23;CL:0000337,1.02e-12,23;CL:0000540,1.23e-11,33;CL:0000047,1.23e-11,33;CL:0000031,1.23e-11,33;CL:0000404,1.23e-11,33;CL:0000221,3.64e-09,44;CL:0000133,3.64e-09,44;CL:0002319,4.04e-09,43;CL:0000393,3.48e-08,39;CL:0000211,3.48e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.11e-26!75;UBERON:0001016!2.11e-26!75;UBERON:0004121!2.51e-26!102;UBERON:0000924!2.51e-26!102;UBERON:0006601!2.51e-26!102;UBERON:0001017!2.59e-26!73;UBERON:0005743!2.59e-26!73;UBERON:0002346!7.16e-26!71;UBERON:0003075!7.16e-26!71;UBERON:0007284!7.16e-26!71;UBERON:0000033!2.50e-23!63;UBERON:0001049!3.25e-22!52;UBERON:0005068!3.25e-22!52;UBERON:0006241!3.25e-22!52;UBERON:0007135!3.25e-22!52;UBERON:0000955!3.56e-21!50;UBERON:0006238!3.56e-21!50;UBERON:0002616!1.87e-20!49;UBERON:0003056!4.07e-20!49;UBERON:0002020!2.22e-17!34;UBERON:0003080!4.21e-17!40;UBERON:0002780!2.27e-16!39;UBERON:0001890!2.27e-16!39;UBERON:0006240!2.27e-16!39;UBERON:0002791!1.49e-14!29;UBERON:0003528!1.49e-14!29;UBERON:0001893!1.49e-14!29;UBERON:0000153!4.81e-11!94;UBERON:0007811!1.61e-10!86;UBERON:0000956!1.81e-10!21;UBERON:0001869!1.81e-10!21;UBERON:0000203!1.81e-10!21;UBERON:0002619!3.06e-09!17;UBERON:0002021!4.46e-08!10;UBERON:0000411!4.46e-08!10;UBERON:0001950!4.46e-08!10;UBERON:0000468!8.23e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.01e-28,64;UBERON:0003075,1.01e-28,64;UBERON:0007284,1.01e-28,64;UBERON:0001016,6.00e-27,75;UBERON:0004121,6.07e-27,95;UBERON:0000924,6.07e-27,95;UBERON:0006601,6.07e-27,95;UBERON:0001017,8.33e-27,73;UBERON:0010371,5.25e-26,73;UBERON:0000073,2.29e-25,54;UBERON:0001049,6.62e-24,52;UBERON:0005068,6.62e-24,52;UBERON:0006241,6.62e-24,52;UBERON:0007135,6.62e-24,52;UBERON:0003056,8.55e-22,49;UBERON:0000955,1.59e-20,47;UBERON:0006238,1.59e-20,47;UBERON:0002020,1.05e-19,34;UBERON:0002616,1.05e-19,46;UBERON:0003080,3.40e-18,40;UBERON:0002780,2.40e-17,39;UBERON:0001890,2.40e-17,39;UBERON:0006240,2.40e-17,39;UBERON:0003528,2.41e-16,29;UBERON:0002791,2.41e-16,29;UBERON:0001893,2.41e-16,29;UBERON:0010314,5.45e-15,92;UBERON:0000956,1.73e-11,21;UBERON:0001869,1.73e-11,21;UBERON:0000203,1.73e-11,21;UBERON:0002619,5.26e-10,17;UBERON:0002021,2.37e-09,10;UBERON:0000411,2.37e-09,10;UBERON:0001950,2.37e-09,10 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,35.292965412694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,1.74986909166855,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,17.8038485556446,25.9205579843296,14.5781222806421,0,0.889294796111139,0,0,0,0.299600110518405,3.07374644257244,9.02099627083756,7.02030879324791,4.83747411108179,29.136400409188,34.2346238475001,10.1667363348412,6.13411014516713,7.35375029288017,77.0811166995721,75.7185914845163,90.4742480879274,12.3973110466382,15.186948838,18.7528813400434,47.1819268312334,104.111082855861,86.3310099938977,72.1840034410486,98.0940880705819,35.0430958151565,1.13589289999776,2.19157524309678,0,0,0,0,0,0,2.24711072210803,0,0,0,1.40843419776681,0,0,0,0,0,0,1.94112595522402,0,3.56261133755579,0.867426633830679,0.913396434936424,0.922461989024234,0.753613202763113,2.93971767839262,0.628332956648377,0,0.86759614151947,0,1.61766849947409,0.220841518460394,1.45462575940567,0,152.831576040028,207.980579865761,0.255457055208591,0,0,0,163.721168869471,149.602697121691,22.9947464366542,148.619793764396,124.02199680521,114.075636463198,125.250255088309,0.407357455401265,0.124406970610093,0.758168275301024,11.995185785529,5.98554037628437,4.82794419310293,5.22180176435513,6.63101198477146,14.8999933141408,17.8078071195941,14.1489604085191,41.1338359475035,0.646703978798527,4.53854592402766,2.81521798662318,2.41115305670332,2.22437799380478,3.1342694986995,1.85203922767149,0.796137067273973,0,0,0,0.828503090142008,0.938104239924385,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0,0.0810688095458557,0,0,0.268412837520744,135.847306772426,22.5361101110633,0,0,0.853153002140936,1.62565670302307,1.41754207454303,2.21851877085677,1.77902435075896,1.52180500890047,0.474529061544512,0.823494773620054,1.75934646160189,1.98956472041151,1.16978452271472,0.898819408654221,0.432276099749388,1.1948476395262,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0.350679099451593,0.126473074248515,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0,0.50925170356284,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0.947457058852424,0.651859905768103,0.339490171550376,0,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0,0,107.729445881808,102.560225768178,0,0.252470927204373,4.73262329124385,5.85658116444958,8.61693590931196,0.477937595905104,0.891194696329576,0.283076530788832,3.23848561339915,4.09158201075837,3.95287777946523,140.41741527633,3.12268187458191,0.534196811001766,0.325773918707152,5.44401405809367,1.32745138339963,0,0,0.565815239267694,0,0.307435147943927,1.03371317267288,1.81766864738753,1.78248689192361,1.8962205476149,0,0,34.3844001811326,3.42116078659489,0.776152102696527,0.643011105094777,5.32020700926821,3.74574516964348,5.75921572107423,1.2178597964584,0,0,1.10264199027481,0,3.55221738730992,1.56813604813205,0.954978752025092,1.14898629821543,0.291480836629851,99.5733871796437,0,0,0,0,0,0,0,0,0,0,3.16335993581135,1.82987520414164,2.16010681643603,1.88179466413022,1.74690050996942,1.21377911746339,1.81837602595739,0,0.518459893167171,0,0,0.448549638131936,0,0,0.387479470433193,0.337912250981556,0.234714477291508,0.39061315453185,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.102710957164827,0.389762468933385,0.358053391334963,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0.772758376128762,0.563047426353546,1.28206136987086,0.214368379079066,0,132.716683015011,156.51058041244,128.328595010425,100.705964853401,123.999936078486,140.503264914484,121.504050041725,142.751821422078,165.396979279235,123.226954196933,2.49089634202024,10.3746467084268,8.87814749921498,10.9398022680732,8.38452650511929,7.53758384645058,18.6687251353357,20.1914356094116,19.8969909946925,17.1834103999382,20.5318232911094,19.6171395041519,14.7953581802414,16.7105647776709,17.0583342798171,15.2413981210584,14.3696564171621,12.5390993301408,15.6592642305257,17.5166714959933,18.172070376427,15.262919329703,15.7367885365232,17.0055307459824,15.0575008664529,17.007536186227,15.3659497213129,14.7319038405192,15.4816689784282,14.5896990631012,13.8802971205284,12.6085737440721,13.0953933814301,12.8597578184352,11.9602098808308,11.7410971630835,15.6734177658424,11.6030369186081,9.56441660344217,1.76473135295612,6.02856372613096 | |phase1_expression=3.04282809499109,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,35.292965412694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,1.74986909166855,0.139986421625363,1.43752564364972,0,0,0,0.257259436035947,0,0,17.8038485556446,25.9205579843296,14.5781222806421,0,0.889294796111139,0,0,0,0.299600110518405,3.07374644257244,9.02099627083756,7.02030879324791,4.83747411108179,29.136400409188,34.2346238475001,10.1667363348412,6.13411014516713,7.35375029288017,77.0811166995721,75.7185914845163,90.4742480879274,12.3973110466382,15.186948838,18.7528813400434,47.1819268312334,104.111082855861,86.3310099938977,72.1840034410486,98.0940880705819,35.0430958151565,1.13589289999776,2.19157524309678,0,0,0,0,0,0,2.24711072210803,0,0,0,1.40843419776681,0,0,0,0,0,0,1.94112595522402,0,3.56261133755579,0.867426633830679,0.913396434936424,0.922461989024234,0.753613202763113,2.93971767839262,0.628332956648377,0,0.86759614151947,0,1.61766849947409,0.220841518460394,1.45462575940567,0,152.831576040028,207.980579865761,0.255457055208591,0,0,0,163.721168869471,149.602697121691,22.9947464366542,148.619793764396,124.02199680521,114.075636463198,125.250255088309,0.407357455401265,0.124406970610093,0.758168275301024,11.995185785529,5.98554037628437,4.82794419310293,5.22180176435513,6.63101198477146,14.8999933141408,17.8078071195941,14.1489604085191,41.1338359475035,0.646703978798527,4.53854592402766,2.81521798662318,2.41115305670332,2.22437799380478,3.1342694986995,1.85203922767149,0.796137067273973,0,0,0,0.828503090142008,0.938104239924385,0.36012412292203,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0,0.0810688095458557,0,0,0.268412837520744,135.847306772426,22.5361101110633,0,0,0.853153002140936,1.62565670302307,1.41754207454303,2.21851877085677,1.77902435075896,1.52180500890047,0.474529061544512,0.823494773620054,1.75934646160189,1.98956472041151,1.16978452271472,0.898819408654221,0.432276099749388,1.1948476395262,0,0.342745537829186,0,0.203651327845314,0.387904974335251,0.350679099451593,0.126473074248515,0,0,0,0,0.166845105716094,0.393117990226406,0,0,0,0.50925170356284,0,0,0,0,0,0,0.252578877947112,0,0,0.369506380333209,0.947457058852424,0.651859905768103,0.339490171550376,0,0.502518772325447,0.238043640886014,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0,0.345369963731791,0.433947175744535,0,0,0,0,107.729445881808,102.560225768178,0,0.252470927204373,4.73262329124385,5.85658116444958,8.61693590931196,0.477937595905104,0.891194696329576,0.283076530788832,3.23848561339915,4.09158201075837,3.95287777946523,140.41741527633,3.12268187458191,0.534196811001766,0.325773918707152,5.44401405809367,1.32745138339963,0,0,0.565815239267694,0,0.307435147943927,1.03371317267288,1.81766864738753,1.78248689192361,1.8962205476149,0,0,34.3844001811326,3.42116078659489,0.776152102696527,0.643011105094777,5.32020700926821,3.74574516964348,5.75921572107423,1.2178597964584,0,0,1.10264199027481,0,3.55221738730992,1.56813604813205,0.954978752025092,1.14898629821543,0.291480836629851,99.5733871796437,0,0,0,0,0,0,0,0,0,0,3.16335993581135,1.82987520414164,2.16010681643603,1.88179466413022,1.74690050996942,1.21377911746339,1.81837602595739,0,0.518459893167171,0,0,0.448549638131936,0,0,0.387479470433193,0.337912250981556,0.234714477291508,0.39061315453185,0.104859344425711,0,0.288030006257865,0,0.405450430580328,0.102710957164827,0.389762468933385,0.358053391334963,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,0.772758376128762,0.563047426353546,1.28206136987086,0.214368379079066,0,132.716683015011,156.51058041244,128.328595010425,100.705964853401,123.999936078486,140.503264914484,121.504050041725,142.751821422078,165.396979279235,123.226954196933,2.49089634202024,10.3746467084268,8.87814749921498,10.9398022680732,8.38452650511929,7.53758384645058,18.6687251353357,20.1914356094116,19.8969909946925,17.1834103999382,20.5318232911094,19.6171395041519,14.7953581802414,16.7105647776709,17.0583342798171,15.2413981210584,14.3696564171621,12.5390993301408,15.6592642305257,17.5166714959933,18.172070376427,15.262919329703,15.7367885365232,17.0055307459824,15.0575008664529,17.007536186227,15.3659497213129,14.7319038405192,15.4816689784282,14.5896990631012,13.8802971205284,12.6085737440721,13.0953933814301,12.8597578184352,11.9602098808308,11.7410971630835,15.6734177658424,11.6030369186081,9.56441660344217,1.76473135295612,6.02856372613096 | ||
|short_description=p1@C230004F18Rik | |short_description=p1@C230004F18Rik | ||
}} | }} |
Latest revision as of 22:36, 1 October 2015
Short description: | p1@C230004F18Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C230004F18Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000096426, ENSMUST00000125930, ENSMUST00000137153, ENSMUST00000140023, ENSMUST00000144853, NR_030706, uc009tih.2_5end |
EntrezGene: | C230004F18Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.02e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-12 | 23 |
neuron | 1.23e-11 | 33 |
neuronal stem cell | 1.23e-11 | 33 |
neuroblast | 1.23e-11 | 33 |
electrically signaling cell | 1.23e-11 | 33 |
ectodermal cell | 3.64e-09 | 44 |
neurectodermal cell | 3.64e-09 | 44 |
neural cell | 4.04e-09 | 43 |
electrically responsive cell | 3.48e-08 | 39 |
electrically active cell | 3.48e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.01e-28 | 64 |
neural plate | 1.01e-28 | 64 |
presumptive neural plate | 1.01e-28 | 64 |
nervous system | 6.00e-27 | 75 |
ectoderm-derived structure | 6.07e-27 | 95 |
ectoderm | 6.07e-27 | 95 |
presumptive ectoderm | 6.07e-27 | 95 |
central nervous system | 8.33e-27 | 73 |
ecto-epithelium | 5.25e-26 | 73 |
regional part of nervous system | 2.29e-25 | 54 |
neural tube | 6.62e-24 | 52 |
neural rod | 6.62e-24 | 52 |
future spinal cord | 6.62e-24 | 52 |
neural keel | 6.62e-24 | 52 |
pre-chordal neural plate | 8.55e-22 | 49 |
brain | 1.59e-20 | 47 |
future brain | 1.59e-20 | 47 |
gray matter | 1.05e-19 | 34 |
regional part of brain | 1.05e-19 | 46 |
anterior neural tube | 3.40e-18 | 40 |
regional part of forebrain | 2.40e-17 | 39 |
forebrain | 2.40e-17 | 39 |
future forebrain | 2.40e-17 | 39 |
brain grey matter | 2.41e-16 | 29 |
regional part of telencephalon | 2.41e-16 | 29 |
telencephalon | 2.41e-16 | 29 |
structure with developmental contribution from neural crest | 5.45e-15 | 92 |
cerebral cortex | 1.73e-11 | 21 |
cerebral hemisphere | 1.73e-11 | 21 |
pallium | 1.73e-11 | 21 |
regional part of cerebral cortex | 5.26e-10 | 17 |
occipital lobe | 2.37e-09 | 10 |
visual cortex | 2.37e-09 | 10 |
neocortex | 2.37e-09 | 10 |