Personal tools

FFCP PHASE1:Mm9::chr3:30995296..30995300,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr3:30995296..30995300,+ |short_description=p6@Skil |description=CAGE_peak_6_at_Skil_5end |association_with_transcript=-454bp_to_ENSMUST00000118204_5end |Entr...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr3:30995296..30995300,+
|DHSsupport=NA
|short_description=p6@Skil
|DPIdataset=NA
|description=CAGE_peak_6_at_Skil_5end
|association_with_transcript=-454bp_to_ENSMUST00000118204_5end
|EntrezGene=20482
|EntrezGene=20482
|HGNC=
|HGNC=
|MCL_coexpression_id=280
|TSSclassifier=NA
|UniProt=Q60665
|UniProt=Q60665
|association_with_transcript=-454bp_to_ENSMUST00000118204_5end
|cluster_id=chr3:30995296..30995300,+
|description=CAGE_peak_6_at_Skil_5end
|id=chr3:30995296..30995300,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,1.21e-14,9;CL:0000789,1.21e-14,9;CL:0002420,1.21e-14,9;CL:0002419,1.21e-14,9;CL:0000790,1.21e-14,9;CL:0000838,4.46e-14,12;CL:0000542,6.90e-13,13;CL:0000051,6.90e-13,13;CL:0000624,3.17e-12,8;CL:0000084,8.62e-12,11;CL:0000827,8.62e-12,11;CL:0000988,3.21e-10,32;CL:0002032,3.21e-10,32;CL:0000037,3.21e-10,32;CL:0000837,3.21e-10,32;CL:0000738,1.58e-09,17;CL:0002087,1.58e-09,17;CL:0000068,2.91e-08,3;CL:0002202,2.91e-08,3;CL:0000069,2.91e-08,3;CL:0002632,2.91e-08,3;CL:0002368,2.91e-08,3;CL:0000307,2.91e-08,3;CL:0000377,2.91e-08,3;CL:0002320,1.21e-07,46;CL:0000134,1.21e-07,46;CL:0002031,1.64e-07,25;CL:0000893,1.78e-07,6;CL:0002489,1.78e-07,6;CL:0000898,1.78e-07,6;CL:0000809,1.78e-07,6;CL:0000810,1.78e-07,6;CL:0000895,1.78e-07,6;CL:0000808,1.78e-07,6;CL:0000894,1.78e-07,6;CL:0000806,1.78e-07,6;CL:0000807,1.78e-07,6;CL:0000805,1.78e-07,6;CL:0002425,1.78e-07,6;CL:0002436,1.78e-07,6;CL:0002427,1.78e-07,6;CL:0002428,1.78e-07,6;CL:0002429,1.78e-07,6;CL:0002433,1.78e-07,6;CL:0002431,1.78e-07,6;CL:0002432,1.78e-07,6;CL:0000034,3.67e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.91e-08,3;UBERON:0001005,2.91e-08,3;UBERON:0007196,2.91e-08,3;UBERON:0001558,2.91e-08,3;UBERON:0002384,1.21e-07,46
|phase1_expression=1.12104192973356,0,0.454999239389536,0.60492842261366,1.50268718983904,0.16787927191189,0,3.87369970324729,6.61706994112834,1.17032263160997,0.68487187290202,0.398860794976682,2.22560948910567,2.09808965805594,0.666219523631325,0.202475267389826,0.699561878128147,0.630924330716475,1.09691546884591,0.42438965179803,0.255129870453209,0.198581902401771,0.261199789138935,0.799962113967033,0.91763712426868,0,0.430761996159075,1.07735616342945,0.570070258369122,0.756090389279792,0.665191531965914,0,0,0,1.44425809875637,0.664938581433969,0.408338712524738,2.09265815368454,0,2.09409497589519,4.1176204162171,2.04913645487534,0.971020706062307,0,0.101376931219515,0,0,0,0,0,0,0,4.69791296961662,7.97898356212479,4.36921938885203,0.514518872071894,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0.441737081903227,0.122490799214954,0.383381884072945,0,0,0.127687338085188,0,0.131886287730194,0.365950574409639,0,0,0,0.763991238884051,0.589257170947335,0.284743361598206,0.559198337475902,0.075726193333184,0,4.63783181922684,0.860423876981386,0.679971333707751,0.539703191637817,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.845060518660083,0,0,0,1.5154372870785,2.78695852022608,1.01104889002957,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0.452167921657868,0.117588707135705,0.376999773989026,0.247194967734374,0,0,0.485300549842228,0,0,0,0,0.209446706813455,0.255457055208591,4.55297473122497,0.599902730993408,2.92261522268049,0.149790639404823,0.457500602818626,0.879580464790051,0,0.255715457330331,0.20778804455956,0.324482526135515,0.305518091550949,0.497627882440372,0.252722758433675,0,0.390361328888111,0.229902104433473,0.180062129805349,1.35634336052144,0.476255494059295,0.896796041993948,0.937017245597288,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0.796137067273973,0,0.257347907114715,3.40996199274711,0.207125772535502,0.703578179943289,0.36012412292203,0.473489471170421,0.590292695242212,0,0,0.268273401399619,0.350296027101508,0.493679549740441,0,0.729619285912702,0.292399974850665,0.219550115291051,0.402619256281115,0.210289948564127,0.102904612379284,0.991256348951394,0,0.639864751605702,0,0,0.201683524623343,0,0.380451252225118,1.42358718463353,0.164698954724011,1.00534083520108,0.795825888164603,0.779856348476481,0,1.51296634912286,0.796565093017469,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.316182685621286,0.147610147979602,0.627994911365499,0,0.296452627087149,0.333690211432188,0,0.224862112384854,0,0,0.25462585178142,0,1.13494658742525,0.549122826376163,2.87536413054709,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0.54390568381871,0,0,0,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,0.395287777946524,0,0.283880170416537,0,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.428674070063185,0,0.713475270408282,0.493647061806363,0,0.23467170806371,0.42366414172764,0.441056796109924,0,0.161464426695906,0.180938774784468,0.238744688006273,0,1.1659233465194,0,0.170870880797853,0,0.370389054739423,0.376736914009382,0.546776910884101,0.457556346413045,7.30907248973578,7.27747552083022,4.97519905695926,0,0.158167996790568,0,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.330613822901344,0.523511883968059,0.648074866458964,0,0,0.897099276263873,0,0,0.774958940866387,0.844780627453891,0.352071715937262,0.2604087696879,0.314578033277133,0.241584120826006,0,0.316011120628178,0.202725215290164,0.205421914329655,0.389762468933385,0,0.198681354781265,0.480781798079875,0.295379054349154,0.100966449948148,0.533447646584999,0.302478555410522,0.292373642219257,0.481059208201647,0,0.226730383615211,0,0,0,0,0,0.549454872801795,0.428736758158132,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0.64183841918363,0.505394423527595,0,0.188626341386076,0.280924522409647,0.256100609619477,0.459483751644906,0.476293691283074,0.115884325944855,0.578727661391115,0,0.294397840268795,0,0.887379030796687,0.238436189947321,0.290692833264657,0.376437521661322,0.592302255241736,0,0.789209134313529,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0,0,0.231867835620421
|phase1_expression=1.12104192973356,0,0.454999239389536,0.60492842261366,1.50268718983904,0.16787927191189,0,3.87369970324729,6.61706994112834,1.17032263160997,0.68487187290202,0.398860794976682,2.22560948910567,2.09808965805594,0.666219523631325,0.202475267389826,0.699561878128147,0.630924330716475,1.09691546884591,0.42438965179803,0.255129870453209,0.198581902401771,0.261199789138935,0.799962113967033,0.91763712426868,0,0.430761996159075,1.07735616342945,0.570070258369122,0.756090389279792,0.665191531965914,0,0,0,1.44425809875637,0.664938581433969,0.408338712524738,2.09265815368454,0,2.09409497589519,4.1176204162171,2.04913645487534,0.971020706062307,0,0.101376931219515,0,0,0,0,0,0,0,4.69791296961662,7.97898356212479,4.36921938885203,0.514518872071894,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0.441737081903227,0.122490799214954,0.383381884072945,0,0,0.127687338085188,0,0.131886287730194,0.365950574409639,0,0,0,0.763991238884051,0.589257170947335,0.284743361598206,0.559198337475902,0.075726193333184,0,4.63783181922684,0.860423876981386,0.679971333707751,0.539703191637817,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0.845060518660083,0,0,0,1.5154372870785,2.78695852022608,1.01104889002957,0.22836775943812,0.258937883647172,0.148442139064825,0,0,0.230615497256059,0.452167921657868,0.117588707135705,0.376999773989026,0.247194967734374,0,0,0.485300549842228,0,0,0,0,0.209446706813455,0.255457055208591,4.55297473122497,0.599902730993408,2.92261522268049,0.149790639404823,0.457500602818626,0.879580464790051,0,0.255715457330331,0.20778804455956,0.324482526135515,0.305518091550949,0.497627882440372,0.252722758433675,0,0.390361328888111,0.229902104433473,0.180062129805349,1.35634336052144,0.476255494059295,0.896796041993948,0.937017245597288,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0.796137067273973,0,0.257347907114715,3.40996199274711,0.207125772535502,0.703578179943289,0.36012412292203,0.473489471170421,0.590292695242212,0,0,0.268273401399619,0.350296027101508,0.493679549740441,0,0.729619285912702,0.292399974850665,0.219550115291051,0.402619256281115,0.210289948564127,0.102904612379284,0.991256348951394,0,0.639864751605702,0,0,0.201683524623343,0,0.380451252225118,1.42358718463353,0.164698954724011,1.00534083520108,0.795825888164603,0.779856348476481,0,1.51296634912286,0.796565093017469,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.316182685621286,0.147610147979602,0.627994911365499,0,0.296452627087149,0.333690211432188,0,0.224862112384854,0,0,0.25462585178142,0,1.13494658742525,0.549122826376163,2.87536413054709,0,0.312037673114561,0.252578877947112,0,0.482443521363367,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0.54390568381871,0,0,0,0.234423373184406,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0.404810701674894,0,0.395287777946524,0,0.283880170416537,0,0.325773918707152,0.329940245945071,0,0,0,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.428674070063185,0,0.713475270408282,0.493647061806363,0,0.23467170806371,0.42366414172764,0.441056796109924,0,0.161464426695906,0.180938774784468,0.238744688006273,0,1.1659233465194,0,0.170870880797853,0,0.370389054739423,0.376736914009382,0.546776910884101,0.457556346413045,7.30907248973578,7.27747552083022,4.97519905695926,0,0.158167996790568,0,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.330613822901344,0.523511883968059,0.648074866458964,0,0,0.897099276263873,0,0,0.774958940866387,0.844780627453891,0.352071715937262,0.2604087696879,0.314578033277133,0.241584120826006,0,0.316011120628178,0.202725215290164,0.205421914329655,0.389762468933385,0,0.198681354781265,0.480781798079875,0.295379054349154,0.100966449948148,0.533447646584999,0.302478555410522,0.292373642219257,0.481059208201647,0,0.226730383615211,0,0,0,0,0,0.549454872801795,0.428736758158132,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0,0,0.341467211508268,0.243106717068294,0,0,0.222246727801615,0,0.64183841918363,0.505394423527595,0,0.188626341386076,0.280924522409647,0.256100609619477,0.459483751644906,0.476293691283074,0.115884325944855,0.578727661391115,0,0.294397840268795,0,0.887379030796687,0.238436189947321,0.290692833264657,0.376437521661322,0.592302255241736,0,0.789209134313529,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0,0,0.231867835620421
|short_description=p6@Skil
}}
}}

Latest revision as of 22:29, 1 October 2015

Short description:p6@Skil
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Skil_5end
Coexpression cluster:MCL_coexpression_mm9:280
Association with transcript: -454bp_to_ENSMUST00000118204_5end
EntrezGene:Skil
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Skil

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.98
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.21e-149
alpha-beta T cell1.21e-149
immature T cell1.21e-149
mature T cell1.21e-149
immature alpha-beta T cell1.21e-149
lymphoid lineage restricted progenitor cell4.46e-1412
lymphocyte6.90e-1313
common lymphoid progenitor6.90e-1313
CD4-positive, alpha-beta T cell3.17e-128
T cell8.62e-1211
pro-T cell8.62e-1211
hematopoietic cell3.21e-1032
hematopoietic oligopotent progenitor cell3.21e-1032
hematopoietic stem cell3.21e-1032
hematopoietic multipotent progenitor cell3.21e-1032
leukocyte1.58e-0917
nongranular leukocyte1.58e-0917
duct epithelial cell2.91e-083
epithelial cell of tracheobronchial tree2.91e-083
branched duct epithelial cell2.91e-083
epithelial cell of lower respiratory tract2.91e-083
respiratory epithelial cell2.91e-083
tracheal epithelial cell2.91e-083
tracheoblast2.91e-083
connective tissue cell1.21e-0746
mesenchymal cell1.21e-0746
hematopoietic lineage restricted progenitor cell1.64e-0725
thymocyte1.78e-076
double negative thymocyte1.78e-076
naive T cell1.78e-076
double-positive, alpha-beta thymocyte1.78e-076
CD4-positive, alpha-beta thymocyte1.78e-076
naive thymus-derived CD4-positive, alpha-beta T cell1.78e-076
DN4 thymocyte1.78e-076
DN1 thymic pro-T cell1.78e-076
DN2 thymocyte1.78e-076
DN3 thymocyte1.78e-076
immature single positive thymocyte1.78e-076
early T lineage precursor1.78e-076
mature CD4 single-positive thymocyte1.78e-076
resting double-positive thymocyte1.78e-076
double-positive blast1.78e-076
CD69-positive double-positive thymocyte1.78e-076
CD69-positive, CD4-positive single-positive thymocyte1.78e-076
CD4-positive, CD8-intermediate double-positive thymocyte1.78e-076
CD24-positive, CD4 single-positive thymocyte1.78e-076
stem cell3.67e-0797

Uber anatomy
Ontology termp-valuen
trachea2.91e-083
respiratory airway2.91e-083
tracheobronchial tree2.91e-083
lower respiratory tract2.91e-083
connective tissue1.21e-0746
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:30995296..30995300,%2B&oldid=4325804"