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FFCP PHASE1:Mm9::chr6:91423498..91423546,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:91423498..91423546,-
|DHSsupport=NA
|short_description=p2@Chchd4
|DPIdataset=NA
|description=CAGE_peak_2_at_Chchd4_5end
|association_with_transcript=-81bp_to_ENSMUST00000040835,NM_133928,uc009cyb.1_5end
|EntrezGene=72170
|EntrezGene=72170
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8VEA4
|UniProt=Q8VEA4
|association_with_transcript=-81bp_to_ENSMUST00000040835,NM_133928,uc009cyb.1_5end
|cluster_id=chr6:91423498..91423546,-
|description=CAGE_peak_2_at_Chchd4_5end
|id=chr6:91423498..91423546,-
|ontology_enrichment_celltype=CL:0000117!2.22e-13!23;CL:0000337!2.22e-13!23;CL:0000221!4.81e-11!44;CL:0000133!4.81e-11!44;CL:0002319!5.31e-11!43;CL:0000540!2.49e-09!33;CL:0000047!2.49e-09!33;CL:0000031!2.49e-09!33;CL:0000404!2.49e-09!33;CL:0000055!1.07e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.22e-13,23;CL:0000337,2.22e-13,23;CL:0000221,4.81e-11,44;CL:0000133,4.81e-11,44;CL:0002319,5.31e-11,43;CL:0000540,2.49e-09,33;CL:0000047,2.49e-09,33;CL:0000031,2.49e-09,33;CL:0000404,2.49e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.62e-26!75;UBERON:0001016!4.62e-26!75;UBERON:0001017!1.05e-25!73;UBERON:0005743!1.05e-25!73;UBERON:0001049!1.40e-24!52;UBERON:0005068!1.40e-24!52;UBERON:0006241!1.40e-24!52;UBERON:0007135!1.40e-24!52;UBERON:0000955!1.80e-23!50;UBERON:0006238!1.80e-23!50;UBERON:0002616!6.07e-23!49;UBERON:0000033!6.36e-23!63;UBERON:0002346!1.03e-21!71;UBERON:0003075!1.03e-21!71;UBERON:0007284!1.03e-21!71;UBERON:0004121!1.42e-21!102;UBERON:0000924!1.42e-21!102;UBERON:0006601!1.42e-21!102;UBERON:0002020!1.27e-19!34;UBERON:0003080!1.55e-18!40;UBERON:0003056!3.21e-18!49;UBERON:0002780!5.21e-18!39;UBERON:0001890!5.21e-18!39;UBERON:0006240!5.21e-18!39;UBERON:0002791!1.43e-16!29;UBERON:0003528!1.43e-16!29;UBERON:0001893!1.43e-16!29;UBERON:0007811!7.42e-14!86;UBERON:0000956!1.25e-11!21;UBERON:0001869!1.25e-11!21;UBERON:0000203!1.25e-11!21;UBERON:0000153!4.22e-11!94;UBERON:0000025!1.13e-10!114;UBERON:0002619!2.96e-10!17;UBERON:0004111!2.96e-10!122;UBERON:0002021!9.74e-08!10;UBERON:0000411!9.74e-08!10;UBERON:0001950!9.74e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.34e-26,54;UBERON:0001016,4.61e-26,75;UBERON:0010314,5.24e-26,92;UBERON:0001017,1.05e-25,73;UBERON:0001049,1.40e-24,52;UBERON:0005068,1.40e-24,52;UBERON:0006241,1.40e-24,52;UBERON:0007135,1.40e-24,52;UBERON:0002346,8.37e-23,64;UBERON:0003075,8.37e-23,64;UBERON:0007284,8.37e-23,64;UBERON:0004121,5.20e-22,95;UBERON:0000924,5.20e-22,95;UBERON:0006601,5.20e-22,95;UBERON:0000955,2.38e-21,47;UBERON:0006238,2.38e-21,47;UBERON:0002616,7.81e-21,46;UBERON:0002020,1.27e-19,34;UBERON:0003080,1.55e-18,40;UBERON:0003056,3.21e-18,49;UBERON:0010371,3.46e-18,73;UBERON:0002780,5.21e-18,39;UBERON:0001890,5.21e-18,39;UBERON:0006240,5.21e-18,39;UBERON:0003528,1.43e-16,29;UBERON:0002791,1.43e-16,29;UBERON:0001893,1.43e-16,29;UBERON:0000956,1.25e-11,21;UBERON:0001869,1.25e-11,21;UBERON:0000203,1.25e-11,21;UBERON:0000025,1.13e-10,114;UBERON:0002619,2.96e-10,17;UBERON:0004111,2.96e-10,122;UBERON:0002021,9.74e-08,10;UBERON:0000411,9.74e-08,10;UBERON:0001950,9.74e-08,10
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|phase1_expression=5.60520964866779,1.39590163055744,2.27499619694768,3.0246421130683,1.50268718983904,2.18243053485457,2.10251376535973,1.80772652818207,7.46180227403834,7.49006484230379,11.4716038711088,10.6894693053751,0.856003649656029,1.74840804837995,2.99798785634096,2.22722794128809,2.09868563438444,3.47008381894061,2.05671650408608,1.69755860719212,9.0145887560134,3.17731043842833,3.91799683708403,0.639969691173627,1.83527424853736,2.8711598205751,1.7230479846363,3.44753972297422,2.09025761402011,3.02436155711917,2.88249663851896,6.35030673459631,6.1506478758457,0,5.48818077527422,3.32469290716985,5.51257261908397,2.51118978442145,1.5626706890476,1.57057123192139,1.17646297606203,5.46436387966757,0.971020706062307,2.64383317748712,2.02753862439029,3.48738829107195,8.60630478782843,5.66865406589161,7.46933021297204,8.55491555926847,4.19959264876088,7.18762821824858,2.01339127269284,0,0.672187598284928,2.57259436035947,3.43840127926508,5.15672092277442,21.4455448511174,15.869729378161,22.1840991227163,6.43804610931351,6.22506357277798,5.39939830368839,12.8552627133707,7.104801149461,7.49000276296012,10.373894243682,7.67303131082735,9.45041568321835,8.41299845405528,23.9946826899195,27.8294361599033,11.3916443269907,12.2682202903343,11.9498442259303,29.731287869835,25.0267182646968,25.1914714540239,19.5191705840687,17.4741399280602,22.3992749339407,33.7811428791671,26.449842671489,26.1285003698345,17.9723437138937,18.6506901846825,17.8943467992289,8.63278603998298,5.29000920747499,4.34796733052517,2.58127163094416,12.9194553404473,1.61910957491345,7.14754059192436,5.82434953226536,10.5333315098814,3.40860645156115,4.67614808285164,5.65343319216544,5.63373679106722,7.69958864485907,2.54805239706646,0,4.76280290224671,2.78695852022608,5.56076889516262,5.02409070763864,2.84831672011889,4.60170631100957,4.16364784238726,3.65358573974569,5.30415643688935,5.57673770044703,4.8211369925639,8.16832843642891,5.19109432242185,8.82056077211461,1.76922110389975,5.98537344805414,5.07935492458905,4.84875253135222,1.86391761218122,13.7606974595427,10.4723353406728,2.55457055208591,3.95389910869537,2.99951365496704,3.55796635804581,15.4284358586967,21.9600289352941,22.3664746760899,22.4233373048037,23.5258220743904,20.1554403222773,22.2270530402828,2.85150218780886,2.98576729464223,7.32895999457657,7.36546495602659,5.98554037628437,3.67843367093557,5.40186389416048,4.9732589885786,4.49040894398764,6.40568601424249,7.21503279109912,11.3829483125167,1.94011193639558,3.21480336285293,2.46331573829528,4.3839146485515,5.00485048606076,3.83077383174383,2.88094990971121,4.17971960318836,2.80885274925294,3.08817488537658,3.12579849335152,6.42089894860056,4.92504725960302,4.68161359798639,7.57583153872673,8.85439042863317,7.55908853148153,10.2314935690179,7.51165523918934,8.87416601990488,13.000228143165,11.1633875573785,11.3496333364198,13.0117988808546,10.3188554186794,12.6154033634749,16.8231958851302,15.6415010816512,3.30418782983798,1.32225283331772,3.83918850963421,4.41249676534833,3.60828891701861,2.8235693447268,4.44756087689741,4.1849637744763,1.42358718463353,4.44687177754829,5.02670417600539,2.78539060857611,5.8489226135736,2.69645822596266,4.10662294761919,2.58883655230677,6.2590407314517,3.88444942873078,3.38123207019241,4.88763186828754,5.43066964069352,6.24208797023835,8.34722290040196,8.41377843483732,7.84993639206874,9.62497878590044,4.74324203339438,3.67059232575407,2.75182593158484,3.59779379815766,1.82574109249653,1.68824011826692,2.29163266603278,1.15078454980324,1.94562272130042,2.19649130550465,2.87536413054709,2.23284568601102,2.18426371180192,4.04126204715379,3.04975602987251,1.92977408545347,4.61882975416512,4.54779388249163,4.56301934037672,2.54617628662782,2.81628297946203,3.68513766371995,3.80869825417622,5.26860849216057,3.62560831444239,2.6575762757853,3.82691444777969,5.73521601505083,2.93564469172023,6.36455857758651,1.50791283939272,2.17562273527484,3.44234991113325,2.20749397043786,13.3256989689867,16.4096361229084,3.77050374366353,8.33154059774431,4.10160685241134,3.51394869866975,4.09304455692318,3.58453196928828,5.12436950389506,4.24614796183249,4.85772842009873,4.38383786866968,4.34816555741176,13.4954952897159,4.82596289708113,4.27357448801413,2.76907830901079,4.28922319728592,2.65490276679926,2.91336763385978,2.72091201268276,6.41257271170054,5.90603785761546,5.53383266299069,4.65170927702798,3.63533729477506,4.9909632973861,3.79244109522979,7.37930260024991,5.15677716240934,8.17055053809091,6.48219938512717,4.65691261617916,4.71541477069503,6.56158864476412,6.59964625127661,7.73380396829969,7.91608867697958,4.4587624532105,7.83778662196135,3.74898276693435,3.46261131177108,1.93757312035087,3.01564624640779,3.46179797609096,3.44695889464629,3.78925087618806,14.6485988588303,1.02522528478712,1.65109494370578,2.96311243791539,3.39063222608444,1.50363650493128,2.28778173206523,2.37969801991397,2.6590775941495,1.65839968565309,2.86401185404534,1.89801596148681,3.45643094115643,2.91614420218863,2.92723614420256,2.40198820120795,2.56242258131159,2.56225712748541,3.40282724579238,2.59229946583586,3.10669656543463,6.76431526421028,4.63501292736334,5.12921320417003,3.69457257853691,4.90807329215378,3.04121025883401,2.69921648885234,6.11960608766566,5.13810787685983,8.45544422891021,6.62469014393091,3.79213344753814,4.45995473638361,5.23825881540619,5.06691209613401,3.04345382634718,1.98681354781265,2.40390899039938,3.98761723371358,2.62512769865184,4.03896075271499,2.01652370273681,2.72882066071307,2.88635524920988,2.22066114144981,9.52267611183888,13.5411431558179,10.7656627931371,13.7665385418544,5.60249822693352,2.43987218086537,4.76194223094889,2.57242054894879,3.51100472824754,20.8958181768315,23.0162618253588,21.1971339972577,30.4180132748327,26.718218271055,20.3956352295219,30.3760125104313,26.1186297870048,34.4388230827996,32.6188996403647,4.8780053364563,5.1873233542134,4.43907374960749,3.40349403895612,4.61148957781561,6.80220981265052,3.33370091702423,4.73880631649457,5.45562656306086,5.81203587056734,4.05566879824384,6.03604292435444,4.86935838843389,4.48176066834085,4.88201486122713,6.66811167796303,5.33067899346335,6.55891349576597,6.1812885120496,6.18235464564469,5.82877729055206,5.14679837862079,6.19934093863034,4.94177816549917,5.27012530325851,6.00763716030903,5.12198324043763,5.26139422875686,4.88894809845102,7.85599180320834,5.81311588808453,5.51625101303155,3.27384834535751,5.88759996506671,5.40138510747196,6.49507502638659,5.38042699424439,5.58664740525576,4.3996316375834,5.07360263974886,7.41977073985349
|short_description=p2@Chchd4
}}
}}

Latest revision as of 22:17, 1 October 2015

Short description:p2@Chchd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Chchd4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -81bp_to_ENSMUST00000040835, NM_133928, uc009cyb.1_5end
EntrezGene:Chchd4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Chchd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.69
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.47
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C321.45
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C722.18
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C87.49
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.41
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.27
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F325.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.19
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.52
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.89
Mouse Schwann, donor1.CNhs12507.11728-123D98.63
Mouse Schwann, donor2.CNhs12573.11746-123F95.29
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.56
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.02
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F55.58
adrenal gland, neonate N00.CNhs11191.1311-23C14.82
adrenal gland, neonate N25.CNhs11223.1377-27I38.17
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H18.82
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B213.76
cerebellum, neonate N30.CNhs11135.1395-42I210.47
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A415.43
corpus striatum, adult.CNhs10487.19-21D821.96
corpus striatum, neonate N00.CNhs11226.630-43F122.37
cortex, adult.CNhs10473.12-14D522.42
cortex, neonate N30.CNhs11107.1392-42F223.53
diencephalon, adult.CNhs10482.20-12F220.16
diencephalon, neonate N30.CNhs11201.1388-42B222.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.85
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G47.37
eyeball, embryo E12.CNhs11016.345-16C65.99
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D44.97
eyeball, neonate N00.CNhs11207.633-15C64.49
eyeball, neonate N01.CNhs11140.1532-43E76.41
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A84.38
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D47.58
heart, embryo E15.CNhs11017.431-16C88.85
heart, embryo E16.CNhs11021.457-17C67.56
heart, embryo E17.CNhs11025.479-18E510.23
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E38.87
heart, neonate N03.CNhs11221.1349-25I213.00
heart, neonate N10.CNhs11118.749-24G111.16
heart, neonate N16.CNhs11209.782-15G111.35
heart, neonate N20.CNhs11127.821-26I613.01
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D212.62
hippocampus, adult.CNhs10478.13-16E816.82
hippocampus, neonate N00.CNhs11228.627-43G115.64
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F83.88
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G76.24
kidney, neonate N10.CNhs11206.758-6D58.35
kidney, neonate N20.CNhs11113.832-19I18.41
kidney, neonate N25.CNhs11122.1353-25F37.85
kidney, neonate N30.CNhs11203.1385-42H19.62
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.62
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H26.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C213.33
medulla oblongata, neonate N30.CNhs11200.1396-42A316.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I74.83
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G37.84
prostate, adult.CNhs10470.859-1F83.75
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H33.02
skin, neonate N06.CNhs11097.693-20I53.46
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C914.65
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.70
testis, neonate N07.CNhs11222.726-26I46.12
testis, neonate N10.CNhs11204.763-44D95.14
testis, neonate N20.CNhs11110.839-18H38.46
testis, neonate N30.CNhs11130.1391-42E26.62
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I25.24
thymus, embryo E16.CNhs11002.456-26C55.07
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F82.40
thymus, neonate N03.CNhs11137.2104-43C73.99
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D34.04
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B49.52
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.77
urinary bladder, adult.CNhs10481.879-12E45.60
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E54.76
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D730.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A630.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A726.12
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A834.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A932.62
whole body, embryo E11.CNhs11014.324-5I84.88
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.56
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.22e-1323
neuroblast (sensu Vertebrata)2.22e-1323
ectodermal cell4.81e-1144
neurectodermal cell4.81e-1144
neural cell5.31e-1143
neuron2.49e-0933
neuronal stem cell2.49e-0933
neuroblast2.49e-0933
electrically signaling cell2.49e-0933

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.34e-2654
nervous system4.61e-2675
structure with developmental contribution from neural crest5.24e-2692
central nervous system1.05e-2573
neural tube1.40e-2452
neural rod1.40e-2452
future spinal cord1.40e-2452
neural keel1.40e-2452
neurectoderm8.37e-2364
neural plate8.37e-2364
presumptive neural plate8.37e-2364
ectoderm-derived structure5.20e-2295
ectoderm5.20e-2295
presumptive ectoderm5.20e-2295
brain2.38e-2147
future brain2.38e-2147
regional part of brain7.81e-2146
gray matter1.27e-1934
anterior neural tube1.55e-1840
pre-chordal neural plate3.21e-1849
ecto-epithelium3.46e-1873
regional part of forebrain5.21e-1839
forebrain5.21e-1839
future forebrain5.21e-1839
brain grey matter1.43e-1629
regional part of telencephalon1.43e-1629
telencephalon1.43e-1629
cerebral cortex1.25e-1121
cerebral hemisphere1.25e-1121
pallium1.25e-1121
tube1.13e-10114
regional part of cerebral cortex2.96e-1017
anatomical conduit2.96e-10122
occipital lobe9.74e-0810
visual cortex9.74e-0810
neocortex9.74e-0810
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