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FFCP PHASE1:Mm9::chr6:90760156..90760213,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=232227
|EntrezGene=232227
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=E9PUA3,Q8R0S2
|UniProt=E9PUA3,Q8R0S2
|association_with_transcript=-39bp_to_ENSMUST00000101151,NM_001134384,uc012epa.1_5end
|association_with_transcript=-39bp_to_ENSMUST00000101151,NM_001134384,uc012epa.1_5end
|cluster_id=chr6:90760156..90760213,-
|description=CAGE_peak_8_at_Iqsec1_5end
|description=CAGE_peak_8_at_Iqsec1_5end
|id=chr6:90760156..90760213,-
|id=chr6:90760156..90760213,-
|ontology_enrichment_celltype=CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23;CL:0000540!1.15e-08!33;CL:0000047!1.15e-08!33;CL:0000031!1.15e-08!33;CL:0000404!1.15e-08!33;CL:0002319!1.47e-08!43;CL:0000221!1.55e-08!44;CL:0000133!1.55e-08!44
|ontology_enrichment_celltype=CL:0000117!2.21e-13!23;CL:0000337!2.21e-13!23;CL:0000540!1.15e-08!33;CL:0000047!1.15e-08!33;CL:0000031!1.15e-08!33;CL:0000404!1.15e-08!33;CL:0002319!1.47e-08!43;CL:0000221!1.55e-08!44;CL:0000133!1.55e-08!44
|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-18,23;CL:0000337,2.23e-18,23;CL:0000540,5.43e-11,33;CL:0000047,5.43e-11,33;CL:0000031,5.43e-11,33;CL:0000404,5.43e-11,33;CL:0002319,7.34e-10,43;CL:0000221,1.71e-09,44;CL:0000133,1.71e-09,44;CL:0000393,1.93e-08,39;CL:0000211,1.93e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.36e-26!73;UBERON:0005743!2.36e-26!73;UBERON:0002346!4.66e-26!71;UBERON:0003075!4.66e-26!71;UBERON:0007284!4.66e-26!71;UBERON:0001049!8.20e-26!52;UBERON:0005068!8.20e-26!52;UBERON:0006241!8.20e-26!52;UBERON:0007135!8.20e-26!52;UBERON:0000033!4.55e-25!63;UBERON:0000955!6.03e-25!50;UBERON:0006238!6.03e-25!50;UBERON:0000073!7.26e-25!75;UBERON:0001016!7.26e-25!75;UBERON:0002616!3.32e-24!49;UBERON:0004121!3.72e-22!102;UBERON:0000924!3.72e-22!102;UBERON:0006601!3.72e-22!102;UBERON:0003056!2.86e-21!49;UBERON:0002020!1.22e-20!34;UBERON:0003080!2.59e-19!40;UBERON:0002780!1.36e-18!39;UBERON:0001890!1.36e-18!39;UBERON:0006240!1.36e-18!39;UBERON:0002791!1.22e-17!29;UBERON:0003528!1.22e-17!29;UBERON:0001893!1.22e-17!29;UBERON:0000153!3.29e-17!94;UBERON:0007811!3.20e-15!86;UBERON:0000956!2.73e-12!21;UBERON:0001869!2.73e-12!21;UBERON:0000203!2.73e-12!21;UBERON:0002619!2.28e-11!17;UBERON:0002021!3.66e-08!10;UBERON:0000411!3.66e-08!10;UBERON:0001950!3.66e-08!10;UBERON:0003076!4.89e-07!12;UBERON:0003057!4.89e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.35e-38,54;UBERON:0001049,3.41e-35,52;UBERON:0005068,3.41e-35,52;UBERON:0006241,3.41e-35,52;UBERON:0007135,3.41e-35,52;UBERON:0001017,3.44e-34,73;UBERON:0001016,7.01e-33,75;UBERON:0002020,9.91e-31,34;UBERON:0000955,8.71e-30,47;UBERON:0006238,8.71e-30,47;UBERON:0002346,7.59e-29,64;UBERON:0003075,7.59e-29,64;UBERON:0007284,7.59e-29,64;UBERON:0002616,1.32e-28,46;UBERON:0003528,1.41e-25,29;UBERON:0002791,1.41e-25,29;UBERON:0001893,1.41e-25,29;UBERON:0004121,5.33e-25,95;UBERON:0000924,5.33e-25,95;UBERON:0006601,5.33e-25,95;UBERON:0003080,5.36e-25,40;UBERON:0002780,7.94e-24,39;UBERON:0001890,7.94e-24,39;UBERON:0006240,7.94e-24,39;UBERON:0010371,1.16e-23,73;UBERON:0003056,4.03e-21,49;UBERON:0002619,7.15e-17,17;UBERON:0000956,1.62e-16,21;UBERON:0001869,1.62e-16,21;UBERON:0000203,1.62e-16,21;UBERON:0010314,4.09e-16,92;UBERON:0002021,5.08e-13,10;UBERON:0000411,5.08e-13,10;UBERON:0001950,5.08e-13,10;UBERON:0003076,2.35e-10,12;UBERON:0003057,2.35e-10,12;UBERON:0002420,2.44e-10,8;UBERON:0007245,2.44e-10,8;UBERON:0010009,2.44e-10,8;UBERON:0010011,2.44e-10,8;UBERON:0000454,2.44e-10,8;UBERON:0000025,2.21e-09,114;UBERON:0004111,4.83e-08,122;UBERON:0002240,1.57e-07,6;UBERON:0005174,1.57e-07,6;UBERON:0001137,1.57e-07,6
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0,0,0,0.342401459862411,0.174840804837995,0,0,0,0.157731082679119,0,0,6.80346321208558,0,0,0,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.31811709640683,1.36100929351998,0.839918529752175,1.43752564364972,0,1.45072428402269,0,0,0,0,4.04632921719196,6.34789175126439,5.07065122804943,0,0,0,0,0,0,0.768436610643109,0.311068836925433,1.21505344498522,0.210324961351382,4.57041575046086,4.19650227808066,0.734944795289724,1.34183659425531,2.75765635983006,16.5173821499083,12.1302971180928,12.7493422602682,6.4624280987795,7.593474419,7.8137005583514,17.0301629390842,11.8180148106653,13.1406493088057,6.48182888042069,6.97621235915604,3.91438836233131,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0.776813650941515,0.445326417194474,0.173485326766136,0,0.230615497256059,0.452167921657868,0.23517741427141,0.251333182659351,0,0,0,0.323533699894818,0.220841518460394,0,0,43.6243387547205,35.8153868651008,0.255457055208591,0,0,0,11.3840885947665,11.4375150704657,1.38219787324151,13.210648334613,8.69432554923124,12.8828587626927,7.94982189032012,0.203678727700633,0,0.252722758433675,1.05220927943237,0.130120442962704,0.459804208866946,0.540186389416048,0.30140963567143,0.680364991513279,0.768682321709099,1.03071897015702,0.776110112217047,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.834141747676794,0.696504333044333,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6643556793867,2.6755199218614,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,13.6468001489623,14.6514608240254,0,0,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0,0,9.63963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,3.06395645178409,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,2.13125464380219,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,14.6485988588303,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0.26175594198403,0,0,24.2387963634202,0,0,1.55560950675238,1.16243841129958,1.35164900392623,0.704143431874524,0.651021924219751,0.419437377702843,9.18019659138823,12.3852902690882,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0.288635524920988,0,0,0,0,0,0.579568782096571,0,0,0,0,8.471277639256,6.44455331110048,7.44764167471216,7.21783365843488,15.7568979547248,9.82012066606611,13.5004500046361,11.2580300806055,9.5159905886683,16.5683299760582,0.31136204275253,0.798049746802062,0.682934423016537,1.21553358534147,0.628839487883947,1.10306105070008,1.11123363900808,1.44224540067226,0,2.02157769411038,0.760437899670719,0.754505365544305,0.749132059759059,0.960377286073039,1.37845125493472,0,0.695305955669133,0.38581844092741,0,1.32479028120958,1.02860775715625,0.532427418478012,0.238436189947321,0.436039249896986,0.470546902076653,1.18460451048347,0.914639864363863,0.526139422875686,0.543216455383447,1.12228454331548,0.830445126869219,0.985044823755635,0.409231043169689,0.619747364743864,1.35034627686799,1.99848462350357,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0,0,0,0.342401459862411,0.174840804837995,0,0,0,0.157731082679119,0,0,6.80346321208558,0,0,0,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.31811709640683,1.36100929351998,0.839918529752175,1.43752564364972,0,1.45072428402269,0,0,0,0,4.04632921719196,6.34789175126439,5.07065122804943,0,0,0,0,0,0,0.768436610643109,0.311068836925433,1.21505344498522,0.210324961351382,4.57041575046086,4.19650227808066,0.734944795289724,1.34183659425531,2.75765635983006,16.5173821499083,12.1302971180928,12.7493422602682,6.4624280987795,7.593474419,7.8137005583514,17.0301629390842,11.8180148106653,13.1406493088057,6.48182888042069,6.97621235915604,3.91438836233131,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.68510327831436,0.776813650941515,0.445326417194474,0.173485326766136,0,0.230615497256059,0.452167921657868,0.23517741427141,0.251333182659351,0,0,0,0.323533699894818,0.220841518460394,0,0,43.6243387547205,35.8153868651008,0.255457055208591,0,0,0,11.3840885947665,11.4375150704657,1.38219787324151,13.210648334613,8.69432554923124,12.8828587626927,7.94982189032012,0.203678727700633,0,0.252722758433675,1.05220927943237,0.130120442962704,0.459804208866946,0.540186389416048,0.30140963567143,0.680364991513279,0.768682321709099,1.03071897015702,0.776110112217047,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0.834141747676794,0.696504333044333,1.02891068203972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6643556793867,2.6755199218614,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,13.6468001489623,14.6514608240254,0,0,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0,0,9.63963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,3.06395645178409,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,2.13125464380219,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,14.6485988588303,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0.26175594198403,0,0,24.2387963634202,0,0,1.55560950675238,1.16243841129958,1.35164900392623,0.704143431874524,0.651021924219751,0.419437377702843,9.18019659138823,12.3852902690882,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0.288635524920988,0,0,0,0,0,0.579568782096571,0,0,0,0,8.471277639256,6.44455331110048,7.44764167471216,7.21783365843488,15.7568979547248,9.82012066606611,13.5004500046361,11.2580300806055,9.5159905886683,16.5683299760582,0.31136204275253,0.798049746802062,0.682934423016537,1.21553358534147,0.628839487883947,1.10306105070008,1.11123363900808,1.44224540067226,0,2.02157769411038,0.760437899670719,0.754505365544305,0.749132059759059,0.960377286073039,1.37845125493472,0,0.695305955669133,0.38581844092741,0,1.32479028120958,1.02860775715625,0.532427418478012,0.238436189947321,0.436039249896986,0.470546902076653,1.18460451048347,0.914639864363863,0.526139422875686,0.543216455383447,1.12228454331548,0.830445126869219,0.985044823755635,0.409231043169689,0.619747364743864,1.35034627686799,1.99848462350357,0.467863216890817,0.644613162144895,0.57386499620653,0.220591419119515,0.463735671240843
|short_description=p8@Iqsec1
|short_description=p8@Iqsec1
}}
}}

Latest revision as of 22:05, 1 October 2015

Short description:p8@Iqsec1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Iqsec1_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: -39bp_to_ENSMUST00000101151, NM_001134384, uc012epa.1_5end
EntrezGene:Iqsec1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Iqsec1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.80
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E417.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B243.62
cerebellum, neonate N30.CNhs11135.1395-42I235.82
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.38
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D513.21
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B27.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E817.66
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C213.65
medulla oblongata, neonate N30.CNhs11200.1396-42A314.65
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C914.65
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G524.24
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H39.18
testis, neonate N30.CNhs11130.1391-42E212.39
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.23e-1823
neuroblast (sensu Vertebrata)2.23e-1823
neuron5.43e-1133
neuronal stem cell5.43e-1133
neuroblast5.43e-1133
electrically signaling cell5.43e-1133
neural cell7.34e-1043
ectodermal cell1.71e-0944
neurectodermal cell1.71e-0944
electrically responsive cell1.93e-0839
electrically active cell1.93e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.35e-3854
neural tube3.41e-3552
neural rod3.41e-3552
future spinal cord3.41e-3552
neural keel3.41e-3552
central nervous system3.44e-3473
nervous system7.01e-3375
gray matter9.91e-3134
brain8.71e-3047
future brain8.71e-3047
neurectoderm7.59e-2964
neural plate7.59e-2964
presumptive neural plate7.59e-2964
regional part of brain1.32e-2846
brain grey matter1.41e-2529
regional part of telencephalon1.41e-2529
telencephalon1.41e-2529
ectoderm-derived structure5.33e-2595
ectoderm5.33e-2595
presumptive ectoderm5.33e-2595
anterior neural tube5.36e-2540
regional part of forebrain7.94e-2439
forebrain7.94e-2439
future forebrain7.94e-2439
ecto-epithelium1.16e-2373
pre-chordal neural plate4.03e-2149
regional part of cerebral cortex7.15e-1717
cerebral cortex1.62e-1621
cerebral hemisphere1.62e-1621
pallium1.62e-1621
structure with developmental contribution from neural crest4.09e-1692
occipital lobe5.08e-1310
visual cortex5.08e-1310
neocortex5.08e-1310
posterior neural tube2.35e-1012
chordal neural plate2.35e-1012
basal ganglion2.44e-108
nuclear complex of neuraxis2.44e-108
aggregate regional part of brain2.44e-108
collection of basal ganglia2.44e-108
cerebral subcortex2.44e-108
tube2.21e-09114
anatomical conduit4.83e-08122
spinal cord1.57e-076
dorsal region element1.57e-076
dorsum1.57e-076
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