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FFCP PHASE1:Mm9::chr3:28162318..28162335,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=665113
|EntrezGene=665113
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=120bp_to_ENSMUST00000161214,ENSMUST00000161234_5end
|association_with_transcript=120bp_to_ENSMUST00000161214,ENSMUST00000161234_5end
|cluster_id=chr3:28162318..28162335,+
|description=CAGE_peak_3_at_Tnik_5end
|description=CAGE_peak_3_at_Tnik_5end
|id=chr3:28162318..28162335,+
|id=chr3:28162318..28162335,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,2.01e-07,9;CL:0000789,2.01e-07,9;CL:0002420,2.01e-07,9;CL:0002419,2.01e-07,9;CL:0000790,2.01e-07,9;CL:0000624,8.63e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!2.52e-14!86;UBERON:0000073!4.66e-14!75;UBERON:0001016!4.66e-14!75;UBERON:0001017!2.92e-13!73;UBERON:0005743!2.92e-13!73;UBERON:0001049!1.34e-12!52;UBERON:0005068!1.34e-12!52;UBERON:0006241!1.34e-12!52;UBERON:0007135!1.34e-12!52;UBERON:0000955!1.50e-12!50;UBERON:0006238!1.50e-12!50;UBERON:0004121!4.79e-12!102;UBERON:0000924!4.79e-12!102;UBERON:0006601!4.79e-12!102;UBERON:0002616!6.28e-12!49;UBERON:0000153!6.60e-12!94;UBERON:0000064!4.73e-11!99;UBERON:0002020!4.91e-11!34;UBERON:0003080!1.36e-10!40;UBERON:0000033!1.56e-10!63;UBERON:0002780!3.94e-10!39;UBERON:0001890!3.94e-10!39;UBERON:0006240!3.94e-10!39;UBERON:0002791!1.77e-09!29;UBERON:0003528!1.77e-09!29;UBERON:0001893!1.77e-09!29;UBERON:0002346!2.46e-09!71;UBERON:0003075!2.46e-09!71;UBERON:0007284!2.46e-09!71;UBERON:0003056!5.73e-09!49;UBERON:0002021!4.47e-08!10;UBERON:0000411!4.47e-08!10;UBERON:0001950!4.47e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.32e-14,75;UBERON:0000073,3.37e-14,54;UBERON:0001017,1.87e-13,73;UBERON:0004121,2.40e-13,95;UBERON:0000924,2.40e-13,95;UBERON:0006601,2.40e-13,95;UBERON:0001049,4.40e-13,52;UBERON:0005068,4.40e-13,52;UBERON:0006241,4.40e-13,52;UBERON:0007135,4.40e-13,52;UBERON:0010371,1.73e-11,73;UBERON:0000955,2.13e-11,47;UBERON:0006238,2.13e-11,47;UBERON:0002020,7.75e-11,34;UBERON:0002616,1.02e-10,46;UBERON:0002346,3.55e-10,64;UBERON:0003075,3.55e-10,64;UBERON:0007284,3.55e-10,64;UBERON:0003080,4.97e-10,40;UBERON:0002780,1.63e-09,39;UBERON:0001890,1.63e-09,39;UBERON:0006240,1.63e-09,39;UBERON:0002021,2.13e-09,10;UBERON:0000411,2.13e-09,10;UBERON:0001950,2.13e-09,10;UBERON:0003528,5.12e-09,29;UBERON:0002791,5.12e-09,29;UBERON:0001893,5.12e-09,29;UBERON:0003056,1.59e-07,49
|phase1_expression=0.640595388419176,1.04692622291808,0.909998478779072,1.51232105653415,1.50268718983904,1.6787927191189,1.40167584357315,19.497621839678,17.73937899111,22.2361300005894,8.73211637950075,6.86040567359893,12.1552518251156,11.8017543265646,0.333109761815663,0.607425802169478,0,2.5236973228659,3.56497527374921,2.54633791078818,8.33424243480484,0,0,0.799962113967033,1.14704640533585,0,0.430761996159075,0.861884930743556,0.380046838912748,0.756090389279792,0.443461021310609,5.08024538767705,7.38077745101484,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0,0,1.67782606057736,15.9579671242496,9.74672017513146,1.54355661621568,0.85960031981627,0.515672092277442,1.41621522601718,0.528990979272033,0.633831403506179,0,0,0,0,0,0.898800331555214,1.15265491596466,1.45165457231869,0.945041568321835,1.05162480675691,5.99867067247988,2.65042249141936,0.734944795289724,0.862609239164127,0.919218786610021,4.40463523997555,11.7472351038373,9.98442466165583,1.58263545276233,1.37231465403614,2.6045668527838,4.74611098302348,7.87867654044352,6.87592114995646,2.94628585473668,2.56269025438385,2.05039390407831,5.60373830665562,5.06329452715463,0.869593466105033,0.860423876981386,0,0,0,0,1.12355536105401,0,0,0,4.3661460130771,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,1.02765491747154,3.88406825470758,0.593768556259299,0.520455980298408,0.304465478312141,0.691846491768175,0.150722640552623,2.23418543557839,0.376999773989026,0,0.289198713839823,0,1.29413479957927,1.76673214768315,1.45462575940567,0,6.14839673724249,5.65506108396329,1.02182822083437,0.359445373517761,0,0.635351135365324,8.23848516726525,34.7700458142156,9.1727677042391,20.8589184230732,36.3115949409069,10.389402227978,19.4689515681309,0.101839363850316,0.995255764880744,1.76905930903572,1.05220927943237,0.260240885925407,0.689706313300419,0.180062129805349,0.90422890701429,1.7009124787832,0.896796041993948,0.468508622798644,1.29351685369508,0,0.567318240503458,0.527853372491847,0,0.278047249225598,0,0.823128545631774,1.39323986772945,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.23674473558521,0.983821158737019,0.308534225774757,0.465067889500816,0,1.05088808130453,0.658239399653922,0.492502392237286,0.405344047729279,0.730999937126662,0.658650345873152,0.671032093801859,21.449574753541,4.52780294468852,1.65209391491899,0.793351699990633,0.213288250535234,0.232236671860439,0.257734922644187,0.605050573870028,0.22237804384487,0,0.474529061544512,0.658795818896044,0,0,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.631222379012867,0.0632365371242573,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0.763877555344259,0,0.324270453550071,0.274561413188081,0,0,0,0,0.179397413521912,0,1.10851914099963,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0.837531287209079,0.476087281772027,1.17080188714679,0.472905432318573,0.44292937929755,0.478364305972461,1.3109065177259,1.55416483679306,1.15719246865209,0,0,0,0.551873492609465,4.81651769963376,5.86058432961016,0.163934945376675,1.76729649043061,0.315508219416257,1.17131623288992,1.29254038639679,3.34556317133573,5.34716817797746,6.79383673893198,0.404810701674894,2.04579100537918,1.58115111178609,41.7717711348349,1.27746076687442,1.06839362200353,0.977321756121456,0.659880491890142,0,1.45668381692989,0,0.377210159511796,0.295301892880773,0.614870295887855,0,1.45413491791002,0.356497378384721,0,0,1.03135543248187,7.14923172082955,0.540183282093931,0.258717367565509,0.643011105094777,1.06404140185364,1.24858172321449,1.81003922662333,2.43571959291679,0.23467170806371,0,0.661585194164886,8.90385765883992,4.03661066739764,4.1012788951146,6.68485126417564,9.02774948597837,0,7.23158677840988,0.854354403989263,0.82554747185289,0.925972636848558,1.13021074202815,0.820165366326151,0.457556346413045,1.5298058699447,1.11961161858926,1.52019971184866,0,0.316335993581135,0.813277868507395,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.743881101528023,1.04702376793612,0.388844919875379,0,3.94585057078933,2.39226473670366,2.48187735685646,1.55560950675238,1.16243841129958,1.520605129417,2.22978753426933,7.55185432094911,13.3171367420653,8.45544422891021,8.06484017522023,6.95224465381992,0,0.205421914329655,0.649604114888975,1.43221356533985,3.57626438606277,4.44723163223885,3.10148007066612,5.04832249740738,2.89585865288999,6.957006774442,9.55087231249574,10.3908788971556,9.11639837016238,1.36038230169127,0,0,0,0.965947970160952,0.93841237725591,0.549454872801795,0.428736758158132,1.00314420807073,35.0146142422581,39.12764510311,40.6755814541972,26.4653900809279,29.4585483501376,33.2373314851468,24.300810008345,31.5224842256954,22.203978040226,34.6899408873719,0.518936737920883,1.99512436700516,1.36586884603307,0,0.628839487883947,0.735374033800057,2.44471400581777,2.26638562962784,1.60459604795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|phase1_expression=0.640595388419176,1.04692622291808,0.909998478779072,1.51232105653415,1.50268718983904,1.6787927191189,1.40167584357315,19.497621839678,17.73937899111,22.2361300005894,8.73211637950075,6.86040567359893,12.1552518251156,11.8017543265646,0.333109761815663,0.607425802169478,0,2.5236973228659,3.56497527374921,2.54633791078818,8.33424243480484,0,0,0.799962113967033,1.14704640533585,0,0.430761996159075,0.861884930743556,0.380046838912748,0.756090389279792,0.443461021310609,5.08024538767705,7.38077745101484,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.58328969722285,0,0,1.67782606057736,15.9579671242496,9.74672017513146,1.54355661621568,0.85960031981627,0.515672092277442,1.41621522601718,0.528990979272033,0.633831403506179,0,0,0,0,0,0.898800331555214,1.15265491596466,1.45165457231869,0.945041568321835,1.05162480675691,5.99867067247988,2.65042249141936,0.734944795289724,0.862609239164127,0.919218786610021,4.40463523997555,11.7472351038373,9.98442466165583,1.58263545276233,1.37231465403614,2.6045668527838,4.74611098302348,7.87867654044352,6.87592114995646,2.94628585473668,2.56269025438385,2.05039390407831,5.60373830665562,5.06329452715463,0.869593466105033,0.860423876981386,0,0,0,0,1.12355536105401,0,0,0,4.3661460130771,0,0,0,0.865964164044856,0.253359865475099,0.505524445014783,1.02765491747154,3.88406825470758,0.593768556259299,0.520455980298408,0.304465478312141,0.691846491768175,0.150722640552623,2.23418543557839,0.376999773989026,0,0.289198713839823,0,1.29413479957927,1.76673214768315,1.45462575940567,0,6.14839673724249,5.65506108396329,1.02182822083437,0.359445373517761,0,0.635351135365324,8.23848516726525,34.7700458142156,9.1727677042391,20.8589184230732,36.3115949409069,10.389402227978,19.4689515681309,0.101839363850316,0.995255764880744,1.76905930903572,1.05220927943237,0.260240885925407,0.689706313300419,0.180062129805349,0.90422890701429,1.7009124787832,0.896796041993948,0.468508622798644,1.29351685369508,0,0.567318240503458,0.527853372491847,0,0.278047249225598,0,0.823128545631774,1.39323986772945,0,0,0,0.621377317606506,0.469052119962192,0.180062061461015,0.23674473558521,0.983821158737019,0.308534225774757,0.465067889500816,0,1.05088808130453,0.658239399653922,0.492502392237286,0.405344047729279,0.730999937126662,0.658650345873152,0.671032093801859,21.449574753541,4.52780294468852,1.65209391491899,0.793351699990633,0.213288250535234,0.232236671860439,0.257734922644187,0.605050573870028,0.22237804384487,0,0.474529061544512,0.658795818896044,0,0,0.58489226135736,0.898819408654221,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.631222379012867,0.0632365371242573,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0.763877555344259,0,0.324270453550071,0.274561413188081,0,0,0,0,0.179397413521912,0,1.10851914099963,0.189491411770485,0.325929952884052,0.848725428875941,0.234690248288502,0.837531287209079,0.476087281772027,1.17080188714679,0.472905432318573,0.44292937929755,0.478364305972461,1.3109065177259,1.55416483679306,1.15719246865209,0,0,0,0.551873492609465,4.81651769963376,5.86058432961016,0.163934945376675,1.76729649043061,0.315508219416257,1.17131623288992,1.29254038639679,3.34556317133573,5.34716817797746,6.79383673893198,0.404810701674894,2.04579100537918,1.58115111178609,41.7717711348349,1.27746076687442,1.06839362200353,0.977321756121456,0.659880491890142,0,1.45668381692989,0,0.377210159511796,0.295301892880773,0.614870295887855,0,1.45413491791002,0.356497378384721,0,0,1.03135543248187,7.14923172082955,0.540183282093931,0.258717367565509,0.643011105094777,1.06404140185364,1.24858172321449,1.81003922662333,2.43571959291679,0.23467170806371,0,0.661585194164886,8.90385765883992,4.03661066739764,4.1012788951146,6.68485126417564,9.02774948597837,0,7.23158677840988,0.854354403989263,0.82554747185289,0.925972636848558,1.13021074202815,0.820165366326151,0.457556346413045,1.5298058699447,1.11961161858926,1.52019971184866,0,0.316335993581135,0.813277868507395,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.743881101528023,1.04702376793612,0.388844919875379,0,3.94585057078933,2.39226473670366,2.48187735685646,1.55560950675238,1.16243841129958,1.520605129417,2.22978753426933,7.55185432094911,13.3171367420653,8.45544422891021,8.06484017522023,6.95224465381992,0,0.205421914329655,0.649604114888975,1.43221356533985,3.57626438606277,4.44723163223885,3.10148007066612,5.04832249740738,2.89585865288999,6.957006774442,9.55087231249574,10.3908788971556,9.11639837016238,1.36038230169127,0,0,0,0.965947970160952,0.93841237725591,0.549454872801795,0.428736758158132,1.00314420807073,35.0146142422581,39.12764510311,40.6755814541972,26.4653900809279,29.4585483501376,33.2373314851468,24.300810008345,31.5224842256954,22.203978040226,34.6899408873719,0.518936737920883,1.99512436700516,1.36586884603307,0,0.628839487883947,0.735374033800057,2.44471400581777,2.26638562962784,1.60459604795908,1.51618327058278,1.01391719956096,1.13175804831646,0.936415074698824,2.11283002936069,1.66562859971278,0,2.0859178670074,0.964546102318525,0.824171801606613,1.32479028120958,1.02860775715625,0.887379030796687,1.1921809497366,1.16277133305863,1.2234219453993,1.4384483341585,1.28049581010941,1.05227884575137,1.08643291076689,1.68342681497322,0.949080144993393,1.67457620038458,2.04615521584845,1.70430525304563,1.73615949883027,1.49886346762768,0.467863216890817,1.93383948643468,1.14772999241306,1.32354851471709,0.463735671240843
|short_description=p3@Tnik
|short_description=p3@Tnik
}}
}}

Latest revision as of 22:03, 1 October 2015

Short description:p3@Tnik
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tnik_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 120bp_to_ENSMUST00000161214, ENSMUST00000161234_5end
EntrezGene:Tnik
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tnik

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E717.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F222.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.86
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E412.16
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.56
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.88
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D95.60
Mouse Schwann, donor2.CNhs12573.11746-123F95.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A48.24
corpus striatum, adult.CNhs10487.19-21D834.77
corpus striatum, neonate N00.CNhs11226.630-43F19.17
cortex, adult.CNhs10473.12-14D520.86
cortex, neonate N30.CNhs11107.1392-42F236.31
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B219.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E821.45
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I941.77
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C38.90
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H34.10
skin, neonate N06.CNhs11097.693-20I56.68
skin, neonate N10.CNhs11108.762-6C49.03
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.23
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.52
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F52.39
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I47.55
testis, neonate N10.CNhs11204.763-44D913.32
testis, neonate N20.CNhs11110.839-18H38.46
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G43.58
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E46.96
thymus, neonate N20.CNhs11186.820-7A29.55
thymus, neonate N25.CNhs11125.1362-25G710.39
thymus, neonate N30.CNhs11132.1393-42G29.12
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.01
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A239.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.68
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A429.46
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.52
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A822.20
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.69
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.01e-079
alpha-beta T cell2.01e-079
immature T cell2.01e-079
mature T cell2.01e-079
immature alpha-beta T cell2.01e-079
CD4-positive, alpha-beta T cell8.63e-078

Uber anatomy
Ontology termp-valuen
nervous system2.32e-1475
regional part of nervous system3.37e-1454
central nervous system1.87e-1373
ectoderm-derived structure2.40e-1395
ectoderm2.40e-1395
presumptive ectoderm2.40e-1395
neural tube4.40e-1352
neural rod4.40e-1352
future spinal cord4.40e-1352
neural keel4.40e-1352
ecto-epithelium1.73e-1173
brain2.13e-1147
future brain2.13e-1147
gray matter7.75e-1134
regional part of brain1.02e-1046
neurectoderm3.55e-1064
neural plate3.55e-1064
presumptive neural plate3.55e-1064
anterior neural tube4.97e-1040
regional part of forebrain1.63e-0939
forebrain1.63e-0939
future forebrain1.63e-0939
occipital lobe2.13e-0910
visual cortex2.13e-0910
neocortex2.13e-0910
brain grey matter5.12e-0929
regional part of telencephalon5.12e-0929
telencephalon5.12e-0929
pre-chordal neural plate1.59e-0749
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