FFCP PHASE1:Mm9::chrX:53707991..53708002,+: Difference between revisions
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{{FFCP|EntrezGene=236790|HGNC=|MCL_coexpression_id=1|UniProt=Q8BND4,Q8CCX8|association_with_transcript=-13bp_to_NM_172779,uc009tge.2,uc009tgf.2,uc009tgg.2_5end|description=CAGE_peak_5_at_Ddx26b_5end|id=chrX:53707991..53708002,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.39e-14!63;UBERON:0002346!5.04e-13!71;UBERON:0003075!5.04e-13!71;UBERON:0007284!5.04e-13!71;UBERON:0000955!1.68e-12!50;UBERON:0006238!1.68e-12!50;UBERON:0001049!3.81e-12!52;UBERON:0005068!3.81e-12!52;UBERON:0006241!3.81e-12!52;UBERON:0007135!3.81e-12!52;UBERON:0002616!6.64e-12!49;UBERON:0003056!1.89e-11!49;UBERON:0001017!4.69e-10!73;UBERON:0005743!4.69e-10!73;UBERON:0000073!1.08e-09!75;UBERON:0001016!1.08e-09!75;UBERON:0004121!1.51e-09!102;UBERON:0000924!1.51e-09!102;UBERON:0006601!1.51e-09!102;UBERON:0000153!6.86e-09!94;UBERON:0003080!8.11e-09!40;UBERON:0002780!2.75e-08!39;UBERON:0001890!2.75e-08!39;UBERON:0006240!2.75e-08!39;UBERON:0002020!3.53e-08!34;UBERON:0007811!1.15e-07!86;UBERON:0002791!3.87e-07!29;UBERON:0003528!3.87e-07!29;UBERON:0001893!3.87e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.48e-15,54;UBERON:0002346,2.01e-15,64;UBERON:0003075,2.01e-15,64;UBERON:0007284,2.01e-15,64;UBERON:0001049,2.89e-14,52;UBERON:0005068,2.89e-14,52;UBERON:0006241,2.89e-14,52;UBERON:0007135,2.89e-14,52;UBERON:0001017,2.82e-13,73;UBERON:0010371,9.61e-13,73;UBERON:0000955,1.15e-12,47;UBERON:0006238,1.15e-12,47;UBERON:0001016,1.56e-12,75;UBERON:0003056,2.62e-12,49;UBERON:0002616,7.14e-12,46;UBERON:0004121,1.68e-11,95;UBERON:0000924,1.68e-11,95;UBERON:0006601,1.68e-11,95;UBERON:0002020,4.49e-11,34;UBERON:0003080,7.27e-10,40;UBERON:0003528,1.45e-09,29;UBERON:0002791,1.45e-09,29;UBERON:0001893,1.45e-09,29;UBERON:0002780,3.84e-09,39;UBERON:0001890,3.84e-09,39;UBERON:0006240,3.84e-09,39;UBERON:0002021,1.18e-08,10;UBERON:0000411,1.18e-08,10;UBERON:0001950,1.18e-08,10;UBERON:0010314,1.82e-08,92;UBERON:0000956,3.23e-08,21;UBERON:0001869,3.23e-08,21;UBERON:0000203,3.23e-08,21;UBERON:0002619,3.41e-08,17|phase1_expression=2.24208385946712,0,0,0,0,0,0,0.516493293766305,0,0.468129052643987,0,0.159544317990673,0.684802919724823,0.699363219351979,0.666219523631325,0.809901069559304,0.699561878128147,1.41957974411207,0.685572168028694,0.42438965179803,0.595303031057488,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,1.0470474879476,0,0.683045484958446,0,1.38486499773135,0.506884656097573,0.550640256485045,0.782391344348039,0.218025156380447,0,0,0.139986421625363,0,0.838913030288682,0,0.336093799142464,0,0.573066879877513,0.515672092277442,0.606949382578793,0,1.26766280701236,0,0,0,0,0.7104801149461,0,0.768436610643109,1.65903379693564,0.675029691658453,0.420649922702764,1.14260393761521,0.441737081903227,1.46988959057945,0.958454710182364,1.83843757322004,2.20231761998777,1.53224805702225,2.91852413186863,1.05509030184155,0.731901148819277,0,1.67509799400829,2.25105044012672,2.44477196442896,2.06240009831567,1.70846016958924,1.3047961207771,0.227178579999552,0.755715601067855,0,1.72084775396277,0,0,0,0,0.140444420131752,0.852151612890289,0.519572009205738,0,0.704217098883403,2.56652954828636,0,0,0,0,0,0.34255163915718,0.776813650941515,1.1875371125186,0.173485326766136,0.913396434936424,0.691846491768175,0.753613202763113,0.587943535678524,0.502666365318702,0.494389935468748,0.578397427679647,1.76922110389975,0.485300549842228,0.441683036920787,0.969750506270444,1.86391761218122,4.39171195517321,5.65506108396329,0.255457055208591,0.479260498023681,0,0.381210681219194,2.99581278809645,5.03250663100489,0.753926112677186,2.60736480288415,2.30143911597297,1.66230435647648,1.46017136760982,0.916554274652847,0.497627882440372,0.252722758433675,2.31486041475121,1.17108398666433,0.919608417733892,0.900310649026746,1.80845781402858,1.42876648217788,1.0249097622788,1.03071897015702,3.10444044886819,0.862271971731369,1.70195472151037,1.93546236580344,0.876782929710299,0.834141747676794,0.696504333044333,1.02891068203972,1.19420560091096,0,0,0.568326998791185,0.621377317606506,0.234526059981096,0.720248245844059,0.23674473558521,0.983821158737019,0.771335564436891,0.465067889500816,0,0.467061369468678,0.822799249567402,0.820837320395476,0.405344047729279,0.438599962275997,0.439100230582101,1.47627060636409,2.73376933133365,1.02904612379284,0,0,1.2797295032114,2.78684006232526,1.15980715189884,0.201683524623343,0.444756087689741,0.570676878337677,0,0.164698954724011,0.754005626400808,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0,0.758671603812327,0.228497025219458,1.1270773567308,1.01825663922657,1.55161989734101,0.771494018793504,0.822074982615345,0.442830443938806,0,0.740382983530803,0,0.500535317148282,0.982794975566015,0.674586337154561,1.42002084971952,0.241177159752417,0.25462585178142,1.43848068725405,0.162135226775035,0,0,0.744281895337007,0.624075346229121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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=236790 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BND4,Q8CCX8 | |||
|association_with_transcript=-13bp_to_NM_172779,uc009tge.2,uc009tgf.2,uc009tgg.2_5end | |||
|cluster_id=chrX:53707991..53708002,+ | |||
|description=CAGE_peak_5_at_Ddx26b_5end | |||
|id=chrX:53707991..53708002,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.39e-14!63;UBERON:0002346!5.04e-13!71;UBERON:0003075!5.04e-13!71;UBERON:0007284!5.04e-13!71;UBERON:0000955!1.68e-12!50;UBERON:0006238!1.68e-12!50;UBERON:0001049!3.81e-12!52;UBERON:0005068!3.81e-12!52;UBERON:0006241!3.81e-12!52;UBERON:0007135!3.81e-12!52;UBERON:0002616!6.64e-12!49;UBERON:0003056!1.89e-11!49;UBERON:0001017!4.69e-10!73;UBERON:0005743!4.69e-10!73;UBERON:0000073!1.08e-09!75;UBERON:0001016!1.08e-09!75;UBERON:0004121!1.51e-09!102;UBERON:0000924!1.51e-09!102;UBERON:0006601!1.51e-09!102;UBERON:0000153!6.86e-09!94;UBERON:0003080!8.11e-09!40;UBERON:0002780!2.75e-08!39;UBERON:0001890!2.75e-08!39;UBERON:0006240!2.75e-08!39;UBERON:0002020!3.53e-08!34;UBERON:0007811!1.15e-07!86;UBERON:0002791!3.87e-07!29;UBERON:0003528!3.87e-07!29;UBERON:0001893!3.87e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.48e-15,54;UBERON:0002346,2.01e-15,64;UBERON:0003075,2.01e-15,64;UBERON:0007284,2.01e-15,64;UBERON:0001049,2.89e-14,52;UBERON:0005068,2.89e-14,52;UBERON:0006241,2.89e-14,52;UBERON:0007135,2.89e-14,52;UBERON:0001017,2.82e-13,73;UBERON:0010371,9.61e-13,73;UBERON:0000955,1.15e-12,47;UBERON:0006238,1.15e-12,47;UBERON:0001016,1.56e-12,75;UBERON:0003056,2.62e-12,49;UBERON:0002616,7.14e-12,46;UBERON:0004121,1.68e-11,95;UBERON:0000924,1.68e-11,95;UBERON:0006601,1.68e-11,95;UBERON:0002020,4.49e-11,34;UBERON:0003080,7.27e-10,40;UBERON:0003528,1.45e-09,29;UBERON:0002791,1.45e-09,29;UBERON:0001893,1.45e-09,29;UBERON:0002780,3.84e-09,39;UBERON:0001890,3.84e-09,39;UBERON:0006240,3.84e-09,39;UBERON:0002021,1.18e-08,10;UBERON:0000411,1.18e-08,10;UBERON:0001950,1.18e-08,10;UBERON:0010314,1.82e-08,92;UBERON:0000956,3.23e-08,21;UBERON:0001869,3.23e-08,21;UBERON:0000203,3.23e-08,21;UBERON:0002619,3.41e-08,17 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0.516493293766305,0,0.468129052643987,0,0.159544317990673,0.684802919724823,0.699363219351979,0.666219523631325,0.809901069559304,0.699561878128147,1.41957974411207,0.685572168028694,0.42438965179803,0.595303031057488,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0,0,0,0,1.0470474879476,0,0.683045484958446,0,1.38486499773135,0.506884656097573,0.550640256485045,0.782391344348039,0.218025156380447,0,0,0.139986421625363,0,0.838913030288682,0,0.336093799142464,0,0.573066879877513,0.515672092277442,0.606949382578793,0,1.26766280701236,0,0,0,0,0.7104801149461,0,0.768436610643109,1.65903379693564,0.675029691658453,0.420649922702764,1.14260393761521,0.441737081903227,1.46988959057945,0.958454710182364,1.83843757322004,2.20231761998777,1.53224805702225,2.91852413186863,1.05509030184155,0.731901148819277,0,1.67509799400829,2.25105044012672,2.44477196442896,2.06240009831567,1.70846016958924,1.3047961207771,0.227178579999552,0.755715601067855,0,1.72084775396277,0,0,0,0,0.140444420131752,0.852151612890289,0.519572009205738,0,0.704217098883403,2.56652954828636,0,0,0,0,0,0.34255163915718,0.776813650941515,1.1875371125186,0.173485326766136,0.913396434936424,0.691846491768175,0.753613202763113,0.587943535678524,0.502666365318702,0.494389935468748,0.578397427679647,1.76922110389975,0.485300549842228,0.441683036920787,0.969750506270444,1.86391761218122,4.39171195517321,5.65506108396329,0.255457055208591,0.479260498023681,0,0.381210681219194,2.99581278809645,5.03250663100489,0.753926112677186,2.60736480288415,2.30143911597297,1.66230435647648,1.46017136760982,0.916554274652847,0.497627882440372,0.252722758433675,2.31486041475121,1.17108398666433,0.919608417733892,0.900310649026746,1.80845781402858,1.42876648217788,1.0249097622788,1.03071897015702,3.10444044886819,0.862271971731369,1.70195472151037,1.93546236580344,0.876782929710299,0.834141747676794,0.696504333044333,1.02891068203972,1.19420560091096,0,0,0.568326998791185,0.621377317606506,0.234526059981096,0.720248245844059,0.23674473558521,0.983821158737019,0.771335564436891,0.465067889500816,0,0.467061369468678,0.822799249567402,0.820837320395476,0.405344047729279,0.438599962275997,0.439100230582101,1.47627060636409,2.73376933133365,1.02904612379284,0,0,1.2797295032114,2.78684006232526,1.15980715189884,0.201683524623343,0.444756087689741,0.570676878337677,0,0.164698954724011,0.754005626400808,0.397912944082302,0.38992817423824,0.898819408654221,0.216138049874694,0,0.758671603812327,0.228497025219458,1.1270773567308,1.01825663922657,1.55161989734101,0.771494018793504,0.822074982615345,0.442830443938806,0,0.740382983530803,0,0.500535317148282,0.982794975566015,0.674586337154561,1.42002084971952,0.241177159752417,0.25462585178142,1.43848068725405,0.162135226775035,0,0,0.744281895337007,0.624075346229121,0,0.179397413521912,0,0.369506380333209,0.37898282354097,0.325929952884052,0.509235257325564,0.469380496577004,0.335012514883631,0.238043640886014,0.780534591431195,0.788175720530955,0.44292937929755,0.478364305972461,1.14704320301017,1.20879487306127,0.289298117163023,1.50791283939272,0,0,0,2.56880943980467,2.34423373184406,0.163934945376675,0,0.315508219416257,0.390438744296638,0.430846795465598,0,1.33679204449436,0.566153061577665,1.21443210502468,0.584511715822624,0,4.17717711348349,1.13552068166615,0.712262414669021,0.651547837414304,1.15479086080775,2.65490276679926,0.242780636154981,0.302323556964751,0.754420319023592,0.885905678642318,1.84461088766356,0.258428293168221,0,0.712994756769443,0.632073515871632,0,2.06271086496374,4.42571487479924,0.900305470156551,0.388076051348264,0.857348140126369,2.6601035046341,0.535106452806212,0.822745103010605,0.608929898229199,0,0,1.54369878638473,0.32977250588296,0.645857706783622,0.603129249281559,0.835606408021955,0.492422699235184,0.291480836629851,3.70850604021019,0.512612642393558,1.23832120777933,0.740778109478847,0.753473828018764,1.23024804948923,0.915112692826091,0.339956859987711,0.839708713941948,0.414599921413271,0,0.474503990371703,1.42323626988794,0.972048067396211,1.04544148007234,1.74690050996942,0.809186078308924,1.23980183588004,0.523511883968059,0.129614973291793,0,0,0.149516546043979,0.66183396182839,0.583353565032143,0.387479470433193,1.35164900392623,0.821500670520278,0.911430693907651,0.629156066554265,0.241584120826006,0.288030006257865,0.948033361884535,0.405450430580328,1.02710957164827,0.649604114888975,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0.302899349844443,0.228620419965,0.100826185136841,0.0974578807397524,0,0.350630706544707,0.453460767230423,0,0.179427713218951,0,1.15913756419314,1.31377732815827,1.64836461840539,0.643105137237198,0,1.12950368523413,1.38097570952153,4.01026859407578,1.71853182343688,1.37016503954128,1.5107877947794,2.70009000092722,4.95353323546643,4.53142408984205,2.5888015587591,0.415149390336707,0.399024873401031,1.19513524027894,1.45864030240976,0,0.9192175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| |||
|short_description=p5@Ddx26b | |||
}} |
Latest revision as of 21:51, 1 October 2015
Short description: | p5@Ddx26b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ddx26b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -13bp_to_NM_172779, uc009tge.2, uc009tgf.2, uc009tgg.2_5end |
EntrezGene: | Ddx26b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.48e-15 | 54 |
neurectoderm | 2.01e-15 | 64 |
neural plate | 2.01e-15 | 64 |
presumptive neural plate | 2.01e-15 | 64 |
neural tube | 2.89e-14 | 52 |
neural rod | 2.89e-14 | 52 |
future spinal cord | 2.89e-14 | 52 |
neural keel | 2.89e-14 | 52 |
central nervous system | 2.82e-13 | 73 |
ecto-epithelium | 9.61e-13 | 73 |
brain | 1.15e-12 | 47 |
future brain | 1.15e-12 | 47 |
nervous system | 1.56e-12 | 75 |
pre-chordal neural plate | 2.62e-12 | 49 |
regional part of brain | 7.14e-12 | 46 |
ectoderm-derived structure | 1.68e-11 | 95 |
ectoderm | 1.68e-11 | 95 |
presumptive ectoderm | 1.68e-11 | 95 |
gray matter | 4.49e-11 | 34 |
anterior neural tube | 7.27e-10 | 40 |
brain grey matter | 1.45e-09 | 29 |
regional part of telencephalon | 1.45e-09 | 29 |
telencephalon | 1.45e-09 | 29 |
regional part of forebrain | 3.84e-09 | 39 |
forebrain | 3.84e-09 | 39 |
future forebrain | 3.84e-09 | 39 |
occipital lobe | 1.18e-08 | 10 |
visual cortex | 1.18e-08 | 10 |
neocortex | 1.18e-08 | 10 |
structure with developmental contribution from neural crest | 1.82e-08 | 92 |
cerebral cortex | 3.23e-08 | 21 |
cerebral hemisphere | 3.23e-08 | 21 |
pallium | 3.23e-08 | 21 |
regional part of cerebral cortex | 3.41e-08 | 17 |