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FFCP PHASE1:Mm9::chr6:89545541..89545639,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66098
|EntrezGene=66098
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q3TJS8
|UniProt=Q3TJS8
|association_with_transcript=0bp_to_ENSMUST00000168027_5end
|association_with_transcript=0bp_to_ENSMUST00000168027_5end
|cluster_id=chr6:89545541..89545639,-
|description=CAGE_peak_1_at_Chchd6_5end
|description=CAGE_peak_1_at_Chchd6_5end
|id=chr6:89545541..89545639,-
|id=chr6:89545541..89545639,-
|ontology_enrichment_celltype=CL:0000117!6.25e-14!23;CL:0000337!6.25e-14!23;CL:0000221!6.08e-13!44;CL:0000133!6.08e-13!44;CL:0002319!1.29e-12!43;CL:0000540!2.36e-10!33;CL:0000047!2.36e-10!33;CL:0000031!2.36e-10!33;CL:0000404!2.36e-10!33;CL:0000055!1.28e-09!50;CL:0000393!7.50e-08!39;CL:0000211!7.50e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,6.25e-14,23;CL:0000337,6.25e-14,23;CL:0000221,6.07e-13,44;CL:0000133,6.07e-13,44;CL:0002319,1.29e-12,43;CL:0000540,2.36e-10,33;CL:0000047,2.36e-10,33;CL:0000031,2.36e-10,33;CL:0000404,2.36e-10,33;CL:0000393,7.50e-08,39;CL:0000211,7.50e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.42e-29!73;UBERON:0005743!2.42e-29!73;UBERON:0000073!5.94e-28!75;UBERON:0001016!5.94e-28!75;UBERON:0001049!3.15e-26!52;UBERON:0005068!3.15e-26!52;UBERON:0006241!3.15e-26!52;UBERON:0007135!3.15e-26!52;UBERON:0002346!2.18e-25!71;UBERON:0003075!2.18e-25!71;UBERON:0007284!2.18e-25!71;UBERON:0000955!1.50e-24!50;UBERON:0006238!1.50e-24!50;UBERON:0000033!1.86e-24!63;UBERON:0002616!4.21e-24!49;UBERON:0004121!3.84e-23!102;UBERON:0000924!3.84e-23!102;UBERON:0006601!3.84e-23!102;UBERON:0003056!3.73e-21!49;UBERON:0003080!4.16e-20!40;UBERON:0002020!4.86e-20!34;UBERON:0002780!1.40e-19!39;UBERON:0001890!1.40e-19!39;UBERON:0006240!1.40e-19!39;UBERON:0002791!9.42e-17!29;UBERON:0003528!9.42e-17!29;UBERON:0001893!9.42e-17!29;UBERON:0007811!1.95e-16!86;UBERON:0000153!9.56e-15!94;UBERON:0000956!3.19e-12!21;UBERON:0001869!3.19e-12!21;UBERON:0000203!3.19e-12!21;UBERON:0002619!1.48e-10!17;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.42e-29,73;UBERON:0001016,5.94e-28,75;UBERON:0000073,1.27e-27,54;UBERON:0002346,5.95e-27,64;UBERON:0003075,5.95e-27,64;UBERON:0007284,5.95e-27,64;UBERON:0001049,3.15e-26,52;UBERON:0005068,3.15e-26,52;UBERON:0006241,3.15e-26,52;UBERON:0007135,3.15e-26,52;UBERON:0004121,8.29e-24,95;UBERON:0000924,8.29e-24,95;UBERON:0006601,8.29e-24,95;UBERON:0010371,2.24e-23,73;UBERON:0000955,8.68e-23,47;UBERON:0006238,8.68e-23,47;UBERON:0002616,2.38e-22,46;UBERON:0003056,3.73e-21,49;UBERON:0003080,4.16e-20,40;UBERON:0010314,4.64e-20,92;UBERON:0002020,4.86e-20,34;UBERON:0002780,1.40e-19,39;UBERON:0001890,1.40e-19,39;UBERON:0006240,1.40e-19,39;UBERON:0003528,9.41e-17,29;UBERON:0002791,9.41e-17,29;UBERON:0001893,9.41e-17,29;UBERON:0000956,3.18e-12,21;UBERON:0001869,3.18e-12,21;UBERON:0000203,3.18e-12,21;UBERON:0002619,1.48e-10,17;UBERON:0002021,1.90e-07,10;UBERON:0000411,1.90e-07,10;UBERON:0001950,1.90e-07,10
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17526,13.2846569210816,14.2180041289839,13.9752040797554,8.09186078308924,8.67861285116027,9.6849698534091,4.40690909192096,6.21339313086926,434.043562786827,9.71857549285862,19.3586433834804,10.8892665472667,15.37001899385,12.8406655372991,11.6183666259296,11.1975770965797,27.8925856172391,142.293047166518,225.239464893651,7.58426689507628,31.0169579393951,25.7804502483716,25.4644813036478,16.8285093927433,15.2984643181574,14.3032584928763,14.325884135934,13.1256384932592,14.098259231175,12.0991422164209,8.28391986287895,11.1605736302782,8.76576766361767,5.21479882314986,9.10142408833665,11.2142320761845,8.89788466729616,14.4892195524143,9.75948872346146,9.89018771043231,8.7891035422417,8.52672576860118,62.6874545304944,62.6042321649761,62.4456109648942,69.0849793021624,101.392212926055,86.8702981998156,79.6526550273531,81.0578165803597,76.5810671183306,77.1462864510212,21.5877682975087,21.1483182902546,24.0734384113329,13.8570828728928,25.9920321658698,28.4957438097522,20.6689456855502,19.3672953804561,23.1061830906107,22.490051846978,23.3200955899021,16.7877443833608,19.8519995836151,21.5764763604409,16.8285924039947,16.6702791949076,20.1638727144049,16.3972837394149,22.2526386433786,20.4606498986812,21.2578936478958,14.198064492747,21.6976932852062,22.9647338279079,21.2687199738647,20.392120501894,21.9513567447327,21.3086466264653,19.4199882799582,18.5176949647054,20.2865880992338,20.1934188869905,20.8707832016542,19.6769788306177,16.2041553224159,30.7267010863673,18.9484602840781,14.8261027293326,12.4337415844748,13.8972594045295,11.3615239454007
|phase1_expression=38.2755744580458,0.697950815278722,0.454999239389536,0.30246421130683,1.50268718983904,5.03637815735669,6.07392865548367,2.45334314538995,1.40788722151667,0.936258105287974,4.10923123741212,3.82906363177615,1.88320802924326,2.18551006047494,6.66219523631325,4.85940641735582,6.99561878128147,3.78554598429885,4.79900517620086,5.94145512517242,74.2427923018839,8.14185799847259,3.13439746966722,3.51983330145495,5.04700418347774,1.14846392823004,3.87685796543167,3.44753972297422,2.47030445293286,7.30887376303799,4.8780712344167,50.1674232033109,39.9792111929971,47.5445043046316,22.8192779603507,19.9481574430191,23.6836453264348,2.09265815368454,2.3440060335714,0.523523743973798,0,0,0.971020706062307,13.3450627054112,12.0638548151222,9.54443111240744,38.3371758730539,39.2445281484804,50.0884496634596,47.6353252731994,29.5371349629515,64.6886539642372,2.85230430298152,3.62681071005672,1.00828139742739,7.71778308107841,14.8997388768154,9.28209766099396,73.0362423703148,77.7616739529888,83.0319138593095,23.041428180701,26.6788438833342,16.6481447697059,11.8663963508037,19.8934432184908,29.6604109413221,66.8539851259505,35.4618474094994,48.0621140460819,44.1682418837902,76.8401148046232,79.2918062016293,56.100786040449,45.0473713785711,68.0221902091416,64.9683697896393,51.0749352340751,61.7498263690099,76.6259331712426,72.7326766639157,65.114171319595,60.3035277842983,95.1068810953539,50.5762200141241,81.3174895907323,72.6095572075425,70.8317894136142,9.99585751998029,9.14415877292105,19.1310562543107,8.60423876981386,7.47968467078526,9.17495425784289,7.14754059192436,4.92829575807069,17.2746636762055,22.3263722577256,22.0818103912438,26.5004680882755,28.7320576344428,23.0987659345772,38.2207859559969,56.8853362522665,14.9378818297738,12.92135313923,9.60496445528088,19.6396273116783,3.10725460376606,26.5711428926036,15.9606500624845,17.0500667854799,14.2981608298756,16.7302131013411,10.347806227942,15.4569907335501,5.6854842578906,21.8345028949067,3.5384422077995,6.95597454773859,4.63767188766826,5.33362778448744,5.59175283654366,25.7647101370161,26.8091784721222,5.10914110417183,20.967646788536,29.395233818677,21.2207279212018,52.8760957099024,50.3250663100489,60.6910520705135,55.6237824615285,56.2574006126727,47.5834622041393,43.3184172390913,13.4427960282417,8.58408097209642,19.7123751578266,16.8353484709179,19.2578255584801,34.9451198738879,23.2280147448901,22.9071323110287,21.5675702309709,23.4448108121275,25.8616759784852,21.7310831420773,17.6765754204931,13.8047438522508,14.2520410572799,18.1932457914887,19.1852601965663,11.1440693287093,11.3180175024369,16.5198441459349,19.6619692447706,15.9555702411123,17.6181369625267,14.0845525324141,13.8370375388847,19.8068267607116,17.7558551688908,17.3152523937715,18.0492522078233,22.5557926407896,19.5839583021722,14.3621371111618,15.3040660419537,9.68588038066662,7.53939928776458,8.18719929581861,10.7579556492615,9.66286215074677,48.3666881697493,44.5576971602302,0.991256348951394,4.7601101999438,13.8637362847902,15.5598570146494,12.8867461322093,9.4791256572971,9.11749979763968,9.13083005340284,6.16887780007865,5.76446341534038,8.29406189040889,9.15199771389294,7.60359939764569,8.08937467788799,2.80979464837102,3.18626037206988,25.9845024305722,22.9639510345555,16.9061603509621,18.3286195060783,24.2440608959532,16.3416460344442,19.2871438228985,17.4179974615931,21.1948282585856,25.7900072596563,4.15033677922008,7.34118465150814,11.0073037263394,8.54476027062444,7.91154473415161,7.71766911207734,9.67578236769395,8.63088412352432,4.53978634970099,7.68771956926628,7.18841032636773,3.34926852901653,7.80094182786401,5.05157755894223,4.66433275156972,3.85954817090694,17.5515530658274,27.4762547067203,17.2742875028547,19.3509397783714,12.4385831592906,15.5780819420889,11.9021820443007,8.78101415360095,11.9802709520705,10.6303051031412,9.40783135079174,9.17634562408133,10.5337838938196,8.38964539772767,4.52373851817817,2.71952841909355,7.37646409528554,12.1412168374082,39.9770969069602,34.1086007983311,21.3115428989678,7.32165688892682,18.2994767261429,21.4741309363151,13.5716740571663,15.0550342710108,10.9171350300373,12.7384438854975,14.1683745586213,11.6902343164525,9.48690667071656,38.5585579706168,14.4778886912434,22.2582004584069,15.3113741792362,18.476653772924,11.9470624505967,21.3646959816384,19.9533547596736,18.1060876565662,17.4228116799656,17.2163682848599,11.3708448994017,18.5402202033528,17.8248689192361,13.9056173491759,12.6502330289999,6.18813259489121,31.6608833351023,20.5269647195694,25.8717367565509,33.65091449996,27.1330557472679,23.7230527410754,24.517804069716,32.8822145043767,6.8054795338476,8.26145076368899,6.3953235435939,13.1909002353184,9.52640117505843,9.34850336386416,13.3697025283513,8.53532678674319,4.95517422270746,34.4891061739548,5.80960994712699,14.0343070214991,8.51894825900674,6.2161590811548,6.01454601972511,6.40578884978263,22.0971958992012,21.4125722055197,20.1771961754459,5.72802370809068,15.5004636854756,14.0290432317526,13.2846569210816,14.2180041289839,13.9752040797554,8.09186078308924,8.67861285116027,9.6849698534091,4.40690909192096,6.21339313086926,434.043562786827,9.71857549285862,19.3586433834804,10.8892665472667,15.37001899385,12.8406655372991,11.6183666259296,11.1975770965797,27.8925856172391,142.293047166518,225.239464893651,7.58426689507628,31.0169579393951,25.7804502483716,25.4644813036478,16.8285093927433,15.2984643181574,14.3032584928763,14.325884135934,13.1256384932592,14.098259231175,12.0991422164209,8.28391986287895,11.1605736302782,8.76576766361767,5.21479882314986,9.10142408833665,11.2142320761845,8.89788466729616,14.4892195524143,9.75948872346146,9.89018771043231,8.7891035422417,8.52672576860118,62.6874545304944,62.6042321649761,62.4456109648942,69.0849793021624,101.392212926055,86.8702981998156,79.6526550273531,81.0578165803597,76.5810671183306,77.1462864510212,21.5877682975087,21.1483182902546,24.0734384113329,13.8570828728928,25.9920321658698,28.4957438097522,20.6689456855502,19.3672953804561,23.1061830906107,22.490051846978,23.3200955899021,16.7877443833608,19.8519995836151,21.5764763604409,16.8285924039947,16.6702791949076,20.1638727144049,16.3972837394149,22.2526386433786,20.4606498986812,21.2578936478958,14.198064492747,21.6976932852062,22.9647338279079,21.2687199738647,20.392120501894,21.9513567447327,21.3086466264653,19.4199882799582,18.5176949647054,20.2865880992338,20.1934188869905,20.8707832016542,19.6769788306177,16.2041553224159,30.7267010863673,18.9484602840781,14.8261027293326,12.4337415844748,13.8972594045295,11.3615239454007
|short_description=p1@Chchd6
|short_description=p1@Chchd6
}}
}}

Latest revision as of 21:39, 1 October 2015

Short description:p1@Chchd6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Chchd6_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000168027_5end
EntrezGene:Chchd6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Chchd6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G738.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A374.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C17.31
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I350.17
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G639.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F522.82
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.95
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B738.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C239.24
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B850.09
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C347.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C429.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C464.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.90
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.28
Mouse Granule cells, donor1.CNhs12131.11713-123C373.04
Mouse Granule cells, donor2.CNhs12357.11731-123E377.76
Mouse Granule cells, donor3.CNhs12108.11636-122C783.03
Mouse Meningeal cells, donor1.CNhs12132.11716-123C623.04
Mouse Meningeal cells, donor3.CNhs12109.11639-122D126.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.89
Mouse Microglia, donor1.CNhs12629.11718-123C829.66
Mouse Microglia, donor2.CNhs12634.11736-123E866.85
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D535.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F548.06
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D944.17
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F176.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D579.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D256.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F245.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D668.02
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D364.97
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F351.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D761.75
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D476.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F472.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D865.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E460.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E595.11
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I650.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D681.32
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F672.61
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E170.83
Mouse Schwann, donor1.CNhs12507.11728-123D910.00
Mouse Schwann, donor2.CNhs12573.11746-123F99.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.13
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I722.33
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E322.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.50
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I838.22
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.94
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.64
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D726.57
adrenal gland, embryo E14.CNhs11038.406-44C515.96
adrenal gland, embryo E16.CNhs11004.1254-43D617.05
adrenal gland, embryo E17.CNhs11043.1263-45I114.30
adrenal gland, embryo E18.CNhs11026.1262-18F516.73
adrenal gland, neonate N00.CNhs11191.1311-23C110.35
adrenal gland, neonate N25.CNhs11223.1377-27I315.46
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H121.83
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F56.96
bone (os femoris), neonate N16.CNhs11225.1525-43A64.64
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B225.76
cerebellum, neonate N30.CNhs11135.1395-42I226.81
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C720.97
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D129.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D421.22
corpora quadrigemina, adult.CNhs10501.16-22A452.88
corpus striatum, adult.CNhs10487.19-21D850.33
corpus striatum, neonate N00.CNhs11226.630-43F160.69
cortex, adult.CNhs10473.12-14D555.62
cortex, neonate N30.CNhs11107.1392-42F256.26
diencephalon, adult.CNhs10482.20-12F247.58
diencephalon, neonate N30.CNhs11201.1388-42B243.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.58
epididymis, adult.CNhs10490.58-23B219.71
eyeball, adult.CNhs10484.31-12G416.84
eyeball, embryo E12.CNhs11016.345-16C619.26
eyeball, embryo E14.CNhs10521.399-16E234.95
eyeball, embryo E15.CNhs10593.426-16C923.23
eyeball, embryo E17.CNhs11023.1261-18D422.91
eyeball, neonate N00.CNhs11207.633-15C621.57
eyeball, neonate N01.CNhs11140.1532-43E723.44
eyeball, neonate N02.CNhs11205.1551-44G825.86
eyeball, neonate N16.CNhs11188.777-19A221.73
forelimb, embryo E11.CNhs10596.335-25E217.68
forelimb, embryo E12.CNhs10600.359-14H213.80
forelimb, embryo E13.CNhs10589.384-1E214.25
forelimb, embryo E14.CNhs10577.413-26A818.19
forelimb, embryo E15.CNhs11007.437-20E719.19
forelimb, embryo E17.CNhs10598.1517-43C411.14
forelimb, embryo E18.CNhs11008.1520-43B511.32
gonad, embryo E13.CNhs11044.1564-45I616.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.96
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.62
heart, embryo E11.CNhs10586.331-24E914.08
heart, embryo E12.CNhs11015.353-12F513.84
heart, embryo E13.CNhs11013.376-3I919.81
heart, embryo E14.CNhs10597.403-26D417.76
heart, embryo E15.CNhs11017.431-16C817.32
heart, embryo E16.CNhs11021.457-17C618.05
heart, embryo E17.CNhs11025.479-18E522.56
heart, embryo E18.CNhs11030.1283-20G319.58
heart, neonate N00.CNhs11213.639-21E314.36
heart, neonate N03.CNhs11221.1349-25I215.30
heart, neonate N10.CNhs11118.749-24G19.69
heart, neonate N16.CNhs11209.782-15G17.54
heart, neonate N20.CNhs11127.821-26I68.19
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D29.66
hippocampus, adult.CNhs10478.13-16E848.37
hippocampus, neonate N00.CNhs11228.627-43G144.56
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I513.86
intestine, embryo E13.CNhs11010.381-16D515.56
intestine, embryo E15.CNhs10602.976-16D812.89
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F79.13
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F29.15
intestine, neonate N10.CNhs11098.755-23A57.60
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I925.98
kidney, embryo E15.CNhs10997.434-16F822.96
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I218.33
kidney, embryo E18.CNhs11001.1288-20C724.24
kidney, neonate N00.CNhs11214.646-21G716.34
kidney, neonate N10.CNhs11206.758-6D519.29
kidney, neonate N20.CNhs11113.832-19I117.42
kidney, neonate N25.CNhs11122.1353-25F321.19
kidney, neonate N30.CNhs11203.1385-42H125.79
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H611.01
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D77.91
liver, embryo E16.CNhs10523.462-17F57.72
liver, embryo E17.CNhs10510.481-18A39.68
liver, embryo E18.CNhs10579.499-43G48.63
liver, neonate N00.CNhs11117.641-24F44.54
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B97.80
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H14.66
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B117.55
lung, embryo E12.CNhs10522.354-16G227.48
lung, embryo E14.CNhs10604.404-26F817.27
lung, embryo E15.CNhs11020.432-17C519.35
lung, embryo E16.CNhs10998.458-17B612.44
lung, embryo E17.CNhs10605.480-44A615.58
lung, embryo E18.CNhs10583.1287-20I611.90
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E511.98
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E69.41
lung, neonate N20.CNhs11109.822-18A49.18
lung, neonate N25.CNhs11119.1359-25C710.53
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H212.14
medulla oblongata, adult.CNhs10477.17-12C239.98
medulla oblongata, neonate N30.CNhs11200.1396-42A334.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C721.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.57
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.92
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.74
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.49
olfactory brain, adult.CNhs10489.18-22I938.56
ovary, adult.CNhs10507.91-2I714.48
ovary, embryo E18.CNhs11040.505-44H722.26
ovary, neonate N00.CNhs11217.1299-22I415.31
oviduct, adult pregnant day01.CNhs10500.988-6G618.48
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F421.36
pancreas, embryo E15.CNhs11042.1556-45F219.95
pancreas, embryo E16.CNhs11003.460-26E518.11
pancreas, embryo E17.CNhs10599.1558-45G317.42
pancreas, embryo E18.CNhs10580.1535-43I717.22
pancreas, neonate N00.CNhs11105.645-26G911.37
pancreas, neonate N01.CNhs11138.1531-43D718.54
pancreas, neonate N02.CNhs11139.1539-43D817.82
pancreas, neonate N16.CNhs11136.787-43B613.91
pancreas, neonate N25.CNhs11094.1555-45E212.65
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G831.66
pituitary gland, embryo E12.CNhs11018.346-16E620.53
pituitary gland, embryo E13.CNhs11009.370-44C725.87
pituitary gland, embryo E14.CNhs11037.398-44A533.65
pituitary gland, embryo E15.CNhs10592.427-16B927.13
pituitary gland, embryo E16.CNhs11036.449-43F623.72
pituitary gland, embryo E17.CNhs11039.1265-44F524.52
pituitary gland, neonate N00.CNhs11190.1308-22E932.88
placenta, adult pregnant day10.CNhs10472.539-13I76.81
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F86.40
skin, adult.CNhs10492.30-1C313.19
skin, neonate N00.CNhs11124.650-25G49.53
skin, neonate N03.CNhs11215.662-22H39.35
skin, neonate N06.CNhs11097.693-20I513.37
skin, neonate N10.CNhs11108.762-6C48.54
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C934.49
spleen, adult.CNhs10465.25-2G25.81
spleen, embryo E16.CNhs11035.461-43C114.03
spleen, embryo E18.CNhs11011.1271-21F28.52
spleen, neonate N10.CNhs11116.752-24D16.22
spleen, neonate N20.CNhs11112.824-19H16.01
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C921.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.18
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E315.50
stomach, embryo E15.CNhs10603.1252-16G814.03
stomach, embryo E16.CNhs11022.459-17D413.28
stomach, embryo E17.CNhs11006.1035-18D514.22
stomach, embryo E18.CNhs10999.1286-20C613.98
stomach, neonate N03.CNhs11193.1340-24B88.09
stomach, neonate N07.CNhs11210.718-18A98.68
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G5434.04
testis, embryo E13.CNhs11031.389-23F59.72
testis, embryo E15.CNhs11034.443-27C519.36
testis, embryo E16.CNhs11033.470-26G510.89
testis, embryo E17.CNhs11029.486-18I515.37
testis, embryo E18.CNhs11027.503-18G512.84
testis, neonate N00.CNhs11189.1300-22B711.62
testis, neonate N07.CNhs11222.726-26I411.20
testis, neonate N10.CNhs11204.763-44D927.89
testis, neonate N20.CNhs11110.839-18H3142.29
testis, neonate N30.CNhs11130.1391-42E2225.24
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I431.02
thymus, embryo E15.CNhs11005.430-45I225.78
thymus, embryo E16.CNhs11002.456-26C525.46
thymus, embryo E17.CNhs10581.478-18C116.83
thymus, embryo E18.CNhs10595.1273-19G415.30
thymus, neonate N02.CNhs11181.1541-43F814.30
thymus, neonate N03.CNhs11137.2104-43C714.33
thymus, neonate N06.CNhs11197.681-26C413.13
thymus, neonate N07.CNhs11211.713-19D314.10
thymus, neonate N10.CNhs11194.748-24E412.10
thymus, neonate N20.CNhs11186.820-7A28.28
thymus, neonate N25.CNhs11125.1362-25G711.16
thymus, neonate N30.CNhs11132.1393-42G28.77
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.21
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.90
urinary bladder, adult.CNhs10481.879-12E414.49
uterus, adult pregnant day19.CNhs10497.590-15F59.76
uterus, adult.CNhs10509.92-27E59.89
vagina, adult.CNhs10502.89-27D58.79
vesicular gland, adult.CNhs10491.51-27F88.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A162.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A262.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A362.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D769.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4101.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A586.87
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A679.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A781.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A876.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A977.15
whole body, embryo E11.CNhs11014.324-5I821.59
whole body, embryo E12.CNhs10587.857-27C921.15
whole body, embryo E13.CNhs10512.372-23H224.07
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B125.99
whole body, embryo E16.CNhs10514.453-14F228.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G520.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.37
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.49
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G523.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G519.85
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G521.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.70
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.19
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G520.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.68
whole body, embryo E17.5.CNhs10513.490-9F916.20
whole body, embryo E17.CNhs10517.475-3I530.73
whole body, embryo E18.CNhs10516.493-3B318.95
whole body, neonate N00.CNhs10525.657-19C214.83
whole body, neonate N01.CNhs10576.659-23C612.43
whole body, neonate N06.CNhs10515.692-21D113.90
whole body, neonate N10.CNhs10518.761-6B411.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.25e-1423
neuroblast (sensu Vertebrata)6.25e-1423
ectodermal cell6.07e-1344
neurectodermal cell6.07e-1344
neural cell1.29e-1243
neuron2.36e-1033
neuronal stem cell2.36e-1033
neuroblast2.36e-1033
electrically signaling cell2.36e-1033
electrically responsive cell7.50e-0839
electrically active cell7.50e-0839

Uber anatomy
Ontology termp-valuen
central nervous system2.42e-2973
nervous system5.94e-2875
regional part of nervous system1.27e-2754
neurectoderm5.95e-2764
neural plate5.95e-2764
presumptive neural plate5.95e-2764
neural tube3.15e-2652
neural rod3.15e-2652
future spinal cord3.15e-2652
neural keel3.15e-2652
ectoderm-derived structure8.29e-2495
ectoderm8.29e-2495
presumptive ectoderm8.29e-2495
ecto-epithelium2.24e-2373
brain8.68e-2347
future brain8.68e-2347
regional part of brain2.38e-2246
pre-chordal neural plate3.73e-2149
anterior neural tube4.16e-2040
structure with developmental contribution from neural crest4.64e-2092
gray matter4.86e-2034
regional part of forebrain1.40e-1939
forebrain1.40e-1939
future forebrain1.40e-1939
brain grey matter9.41e-1729
regional part of telencephalon9.41e-1729
telencephalon9.41e-1729
cerebral cortex3.18e-1221
cerebral hemisphere3.18e-1221
pallium3.18e-1221
regional part of cerebral cortex1.48e-1017
occipital lobe1.90e-0710
visual cortex1.90e-0710
neocortex1.90e-0710
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