FFCP PHASE1:Mm9::chr11:62416617..62416668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100217426 | |EntrezGene=100217426 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=657 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_NR_028526,uc011xwc.1_5end | |association_with_transcript=29bp_to_NR_028526,uc011xwc.1_5end | ||
|cluster_id=chr11:62416617..62416668,+ | |||
|description=CAGE_peak_1_at_Snord49b_5end | |description=CAGE_peak_1_at_Snord49b_5end | ||
|id=chr11:62416617..62416668,+ | |id=chr11:62416617..62416668,+ | ||
|ontology_enrichment_celltype=CL:0002320!1.19e-14!46;CL:0000134!1.19e-14!46;CL:0000063!1.18e-13!66;CL:0000988!1.42e-12!32;CL:0002032!1.42e-12!32;CL:0000037!1.42e-12!32;CL:0000566!1.42e-12!32;CL:0000837!1.42e-12!32;CL:0000219!3.39e-12!54;CL:0000144!6.79e-11!121;CL:0000012!6.79e-11!121;CL:0000034!1.19e-10!97;CL:0002031!1.29e-09!25;CL:0002371!1.45e-09!118;CL:0000723!3.82e-09!91;CL:0000048!3.82e-09!91;CL:0000049!2.22e-08!19;CL:0000548!2.74e-08!115;CL:0000004!2.74e-08!115;CL:0000255!2.74e-08!115;CL:0000738!2.78e-07!17;CL:0002087!2.78e-07!17 | |ontology_enrichment_celltype=CL:0002320!1.19e-14!46;CL:0000134!1.19e-14!46;CL:0000063!1.18e-13!66;CL:0000988!1.42e-12!32;CL:0002032!1.42e-12!32;CL:0000037!1.42e-12!32;CL:0000566!1.42e-12!32;CL:0000837!1.42e-12!32;CL:0000219!3.39e-12!54;CL:0000144!6.79e-11!121;CL:0000012!6.79e-11!121;CL:0000034!1.19e-10!97;CL:0002031!1.29e-09!25;CL:0002371!1.45e-09!118;CL:0000723!3.82e-09!91;CL:0000048!3.82e-09!91;CL:0000049!2.22e-08!19;CL:0000548!2.74e-08!115;CL:0000004!2.74e-08!115;CL:0000255!2.74e-08!115;CL:0000738!2.78e-07!17;CL:0002087!2.78e-07!17 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.04e-16,46;CL:0000134,1.04e-16,46;CL:0000988,8.88e-16,32;CL:0002032,8.88e-16,32;CL:0000037,8.88e-16,32;CL:0000837,8.88e-16,32;CL:0000219,1.16e-13,54;CL:0000034,4.68e-12,97;CL:0002031,6.73e-12,25;CL:0000049,1.99e-10,19;CL:0000723,2.46e-10,91;CL:0000048,2.46e-10,91;CL:0000738,9.01e-09,17;CL:0002087,9.01e-09,17;CL:0000763,4.07e-08,16;CL:0000838,1.82e-07,12;CL:0000084,8.36e-07,11;CL:0000827,8.36e-07,11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.19e-14!46;UBERON:0002193!2.18e-10!48;UBERON:0002405!4.25e-10!70;UBERON:0002390!1.51e-09!45;UBERON:0003061!1.51e-09!45;UBERON:0002371!9.12e-09!16;UBERON:0002204!7.37e-07!32 | |ontology_enrichment_uberon=UBERON:0002384!1.19e-14!46;UBERON:0002193!2.18e-10!48;UBERON:0002405!4.25e-10!70;UBERON:0002390!1.51e-09!45;UBERON:0003061!1.51e-09!45;UBERON:0002371!9.12e-09!16;UBERON:0002204!7.37e-07!32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.04e-16,46;UBERON:0002193,1.19e-11,48;UBERON:0002405,1.19e-11,48;UBERON:0002390,1.21e-10,45;UBERON:0003061,1.21e-10,45;UBERON:0002371,2.56e-10,16;UBERON:0002204,8.33e-08,32;UBERON:0001474,4.70e-07,22;UBERON:0004765,4.70e-07,22;UBERON:0001434,4.70e-07,22 | |||
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| ||
|short_description=p1@Snord49b | |short_description=p1@Snord49b | ||
}} | }} |
Latest revision as of 21:19, 1 October 2015
Short description: | p1@Snord49b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Snord49b_5end |
Coexpression cluster: | MCL_coexpression_mm9:657 |
Association with transcript: | 29bp_to_NR_028526, uc011xwc.1_5end |
EntrezGene: | Snord49b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.04e-16 | 46 |
mesenchymal cell | 1.04e-16 | 46 |
hematopoietic cell | 8.88e-16 | 32 |
hematopoietic oligopotent progenitor cell | 8.88e-16 | 32 |
hematopoietic stem cell | 8.88e-16 | 32 |
hematopoietic multipotent progenitor cell | 8.88e-16 | 32 |
motile cell | 1.16e-13 | 54 |
stem cell | 4.68e-12 | 97 |
hematopoietic lineage restricted progenitor cell | 6.73e-12 | 25 |
common myeloid progenitor | 1.99e-10 | 19 |
somatic stem cell | 2.46e-10 | 91 |
multi fate stem cell | 2.46e-10 | 91 |
leukocyte | 9.01e-09 | 17 |
nongranular leukocyte | 9.01e-09 | 17 |
myeloid cell | 4.07e-08 | 16 |
lymphoid lineage restricted progenitor cell | 1.82e-07 | 12 |
T cell | 8.36e-07 | 11 |
pro-T cell | 8.36e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.04e-16 | 46 |
hemolymphoid system | 1.19e-11 | 48 |
immune system | 1.19e-11 | 48 |
hematopoietic system | 1.21e-10 | 45 |
blood island | 1.21e-10 | 45 |
bone marrow | 2.56e-10 | 16 |
musculoskeletal system | 8.33e-08 | 32 |
bone element | 4.70e-07 | 22 |
skeletal element | 4.70e-07 | 22 |
skeletal system | 4.70e-07 | 22 |