FFCP PHASE1:Mm9::chr16:32099990..32100059,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:32099990..32100059,+ to FFCP PHASE1:Mm9::chr16:32099990..32100059,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66994 | |EntrezGene=66994 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=463 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CQA8 | |UniProt=Q9CQA8 | ||
|association_with_transcript=0bp_to_ENSMUST00000042869_5end | |||
|cluster_id=chr16:32099990..32100059,+ | |||
|description=CAGE_peak_2_at_1500031L02Rik_5end | |||
|id=chr16:32099990..32100059,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.07e-09!33;CL:0000047!1.07e-09!33;CL:0000031!1.07e-09!33;CL:0000404!1.07e-09!33;CL:0000117!3.01e-09!23;CL:0000337!3.01e-09!23;CL:0000393!9.94e-09!39;CL:0000211!9.94e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.17e-10,33;CL:0000047,4.17e-10,33;CL:0000031,4.17e-10,33;CL:0000404,4.17e-10,33;CL:0000117,1.24e-09,23;CL:0000337,1.24e-09,23;CL:0000393,5.25e-09,39;CL:0000211,5.25e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.02e-23!71;UBERON:0003075!6.02e-23!71;UBERON:0007284!6.02e-23!71;UBERON:0001017!6.86e-23!73;UBERON:0005743!6.86e-23!73;UBERON:0000073!1.56e-21!75;UBERON:0001016!1.56e-21!75;UBERON:0000033!9.57e-21!63;UBERON:0001049!2.07e-20!52;UBERON:0005068!2.07e-20!52;UBERON:0006241!2.07e-20!52;UBERON:0007135!2.07e-20!52;UBERON:0000955!4.98e-20!50;UBERON:0006238!4.98e-20!50;UBERON:0002616!2.59e-19!49;UBERON:0003056!1.23e-18!49;UBERON:0004121!3.96e-18!102;UBERON:0000924!3.96e-18!102;UBERON:0006601!3.96e-18!102;UBERON:0003080!1.89e-16!40;UBERON:0002780!9.41e-16!39;UBERON:0001890!9.41e-16!39;UBERON:0006240!9.41e-16!39;UBERON:0002020!8.41e-13!34;UBERON:0000153!5.82e-11!94;UBERON:0002791!1.01e-10!29;UBERON:0003528!1.01e-10!29;UBERON:0001893!1.01e-10!29;UBERON:0007811!1.53e-09!86;UBERON:0000956!5.51e-07!21;UBERON:0001869!5.51e-07!21;UBERON:0000203!5.51e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,7.21e-24,64;UBERON:0003075,7.21e-24,64;UBERON:0007284,7.21e-24,64;UBERON:0001017,5.59e-23,73;UBERON:0000073,4.45e-22,54;UBERON:0001016,2.45e-21,75;UBERON:0010314,6.40e-21,92;UBERON:0001049,8.44e-21,52;UBERON:0005068,8.44e-21,52;UBERON:0006241,8.44e-21,52;UBERON:0007135,8.44e-21,52;UBERON:0003056,5.60e-19,49;UBERON:0010371,1.40e-18,73;UBERON:0000955,1.63e-18,47;UBERON:0006238,1.63e-18,47;UBERON:0002616,8.71e-18,46;UBERON:0004121,2.04e-17,95;UBERON:0000924,2.04e-17,95;UBERON:0006601,2.04e-17,95;UBERON:0003080,7.99e-17,40;UBERON:0002780,4.26e-16,39;UBERON:0001890,4.26e-16,39;UBERON:0006240,4.26e-16,39;UBERON:0002020,5.13e-13,34;UBERON:0003528,7.65e-11,29;UBERON:0002791,7.65e-11,29;UBERON:0001893,7.65e-11,29;UBERON:0000956,5.92e-07,21;UBERON:0001869,5.92e-07,21;UBERON:0000203,5.92e-07,21 | |||
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| ||
|short_description=p2@1500031L02Rik | |||
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Latest revision as of 21:16, 1 October 2015
Short description: | p2@1500031L02Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_1500031L02Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:463 |
Association with transcript: | 0bp_to_ENSMUST00000042869_5end |
EntrezGene: | 1500031L02Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.17e-10 | 33 |
neuronal stem cell | 4.17e-10 | 33 |
neuroblast | 4.17e-10 | 33 |
electrically signaling cell | 4.17e-10 | 33 |
CNS neuron (sensu Vertebrata) | 1.24e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-09 | 23 |
electrically responsive cell | 5.25e-09 | 39 |
electrically active cell | 5.25e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 7.21e-24 | 64 |
neural plate | 7.21e-24 | 64 |
presumptive neural plate | 7.21e-24 | 64 |
central nervous system | 5.59e-23 | 73 |
regional part of nervous system | 4.45e-22 | 54 |
nervous system | 2.45e-21 | 75 |
structure with developmental contribution from neural crest | 6.40e-21 | 92 |
neural tube | 8.44e-21 | 52 |
neural rod | 8.44e-21 | 52 |
future spinal cord | 8.44e-21 | 52 |
neural keel | 8.44e-21 | 52 |
pre-chordal neural plate | 5.60e-19 | 49 |
ecto-epithelium | 1.40e-18 | 73 |
brain | 1.63e-18 | 47 |
future brain | 1.63e-18 | 47 |
regional part of brain | 8.71e-18 | 46 |
ectoderm-derived structure | 2.04e-17 | 95 |
ectoderm | 2.04e-17 | 95 |
presumptive ectoderm | 2.04e-17 | 95 |
anterior neural tube | 7.99e-17 | 40 |
regional part of forebrain | 4.26e-16 | 39 |
forebrain | 4.26e-16 | 39 |
future forebrain | 4.26e-16 | 39 |
gray matter | 5.13e-13 | 34 |
brain grey matter | 7.65e-11 | 29 |
regional part of telencephalon | 7.65e-11 | 29 |
telencephalon | 7.65e-11 | 29 |
cerebral cortex | 5.92e-07 | 21 |
cerebral hemisphere | 5.92e-07 | 21 |
pallium | 5.92e-07 | 21 |