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FFCP PHASE1:Mm9::chrX:45872653..45872700,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:45872653..45872700,+
|DHSsupport=NA
|short_description=p2@Rab33a
|DPIdataset=NA
|description=CAGE_peak_2_at_Rab33a_5end
|association_with_transcript=6bp_to_NM_011228,uc009tci.1_5end
|EntrezGene=19337
|EntrezGene=19337
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=P97950,Q3SXA7
|UniProt=P97950,Q3SXA7
|association_with_transcript=6bp_to_NM_011228,uc009tci.1_5end
|cluster_id=chrX:45872653..45872700,+
|description=CAGE_peak_2_at_Rab33a_5end
|id=chrX:45872653..45872700,+
|ontology_enrichment_celltype=CL:0000117!2.26e-15!23;CL:0000337!2.26e-15!23;CL:0000540!7.98e-11!33;CL:0000047!7.98e-11!33;CL:0000031!7.98e-11!33;CL:0000404!7.98e-11!33;CL:0000221!1.36e-08!44;CL:0000133!1.36e-08!44;CL:0002319!1.67e-08!43;CL:0000393!4.62e-07!39;CL:0000211!4.62e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.59e-22,23;CL:0000337,1.59e-22,23;CL:0000540,2.65e-14,33;CL:0000047,2.65e-14,33;CL:0000031,2.65e-14,33;CL:0000404,2.65e-14,33;CL:0000393,8.49e-11,39;CL:0000211,8.49e-11,39;CL:0002319,7.66e-10,43;CL:0000221,1.97e-09,44;CL:0000133,1.97e-09,44;CL:0002609,4.08e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!8.01e-22!71;UBERON:0003075!8.01e-22!71;UBERON:0007284!8.01e-22!71;UBERON:0001017!2.41e-21!73;UBERON:0005743!2.41e-21!73;UBERON:0000073!8.93e-21!75;UBERON:0001016!8.93e-21!75;UBERON:0004121!2.87e-20!102;UBERON:0000924!2.87e-20!102;UBERON:0006601!2.87e-20!102;UBERON:0001049!8.51e-20!52;UBERON:0005068!8.51e-20!52;UBERON:0006241!8.51e-20!52;UBERON:0007135!8.51e-20!52;UBERON:0002020!1.62e-19!34;UBERON:0000955!2.70e-18!50;UBERON:0006238!2.70e-18!50;UBERON:0000033!2.87e-18!63;UBERON:0002616!1.00e-17!49;UBERON:0002791!3.47e-16!29;UBERON:0003528!3.47e-16!29;UBERON:0001893!3.47e-16!29;UBERON:0003056!4.91e-16!49;UBERON:0003080!3.56e-15!40;UBERON:0002780!1.08e-14!39;UBERON:0001890!1.08e-14!39;UBERON:0006240!1.08e-14!39;UBERON:0007811!7.64e-13!86;UBERON:0000153!4.41e-12!94;UBERON:0000956!1.88e-11!21;UBERON:0001869!1.88e-11!21;UBERON:0000203!1.88e-11!21;UBERON:0002619!4.92e-09!17;UBERON:0002021!1.60e-08!10;UBERON:0000411!1.60e-08!10;UBERON:0001950!1.60e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,5.22e-30,34;UBERON:0000073,2.48e-28,54;UBERON:0001049,1.71e-26,52;UBERON:0005068,1.71e-26,52;UBERON:0006241,1.71e-26,52;UBERON:0007135,1.71e-26,52;UBERON:0002346,3.70e-26,64;UBERON:0003075,3.70e-26,64;UBERON:0007284,3.70e-26,64;UBERON:0001017,8.56e-26,73;UBERON:0003528,6.65e-25,29;UBERON:0002791,6.65e-25,29;UBERON:0001893,6.65e-25,29;UBERON:0001016,1.25e-24,75;UBERON:0010371,5.15e-22,73;UBERON:0000955,8.12e-22,47;UBERON:0006238,8.12e-22,47;UBERON:0004121,1.28e-21,95;UBERON:0000924,1.28e-21,95;UBERON:0006601,1.28e-21,95;UBERON:0003056,3.23e-21,49;UBERON:0002616,5.36e-21,46;UBERON:0010314,7.11e-21,92;UBERON:0003080,1.32e-19,40;UBERON:0002780,6.79e-19,39;UBERON:0001890,6.79e-19,39;UBERON:0006240,6.79e-19,39;UBERON:0000956,1.15e-17,21;UBERON:0001869,1.15e-17,21;UBERON:0000203,1.15e-17,21;UBERON:0002619,5.82e-14,17;UBERON:0002021,4.01e-12,10;UBERON:0000411,4.01e-12,10;UBERON:0001950,4.01e-12,10;UBERON:0002420,2.54e-08,8;UBERON:0007245,2.54e-08,8;UBERON:0010009,2.54e-08,8;UBERON:0010011,2.54e-08,8;UBERON:0000454,2.54e-08,8;UBERON:0003076,2.15e-07,12;UBERON:0003057,2.15e-07,12;UBERON:0002240,8.36e-07,6;UBERON:0005174,8.36e-07,6;UBERON:0001137,8.36e-07,6
|phase1_expression=2.40223270657191,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,1.43752564364972,0.167782606057736,0,0,0,0,0,10.1158230429799,17.4567023159771,19.0149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,8.19147937236973,13.7706057098324,10.0955981448663,10.8547374073445,16.1234034894678,12.7390431183552,11.3097655801519,14.7075005857603,5.50579404996943,7.15049093277051,6.60508093001847,12.265424758908,16.1933129176265,13.022834263919,5.30447698102624,4.50210088025344,5.65353516774197,12.6690291753677,7.26095572075425,13.6071595452469,0.075726193333184,0.151143120213571,0,0,0.679971333707751,0,0,0,0.561777680527007,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,1.33597925158342,1.90833859442749,6.39377504455497,5.30415643688935,4.6724018571313,5.87943535678524,2.63899841792318,0,0,0,0,0,0,0,4.09893115816166,4.60782754989601,0,0,0,0.127070227073065,4.34392854273986,7.32000964509802,11.9371634507221,11.8200537730748,12.7857728665165,8.93488591606108,8.27430441645564,0.509196819251581,0,0,0,0.130120442962704,1.14951052216736,1.44049703844279,1.35634336052144,1.29269348387523,1.2811372028485,1.78033276663485,2.06962696591213,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,0,0.411564272815887,0.59710280045548,0,0,0,0.621377317606506,0.703578179943289,0.900310307305074,0.946978942340841,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.162137619091711,0,0.439100230582101,0.134206418760372,5.25724871410318,9.98174740079059,0,0,1.49301775374664,0.696710015581316,0.38660238396628,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.456994050438915,2.25415471346161,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0.234690248288502,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,3.85321415970701,5.39173758324135,0,0,0,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,7.06906896127976,1.41940085208269,0.890328018336276,0.488660878060728,0.329940245945071,0,0.242780636154981,0.604647113929502,0.565815239267694,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.822745103010605,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,3.33765543618917,0,0.82554747185289,0,0.188368457004691,0,0.228778173206523,0,0.139951452323658,0,0,0.790839983952838,1.21991680276109,0.108005340821801,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0.598066184175915,0.992750942742586,0.777804753376191,0.904118764344118,1.18269287843545,0.352071715937262,0.39061315453185,0.209718688851422,0,0,0.632022241256357,0.202725215290164,0.410843828659309,0.909445760844565,0.537080087002444,0.79472541912506,0.480781798079875,0.295379054349154,0.201932899896295,0.304827226619999,0.100826185136841,0.194915761479505,0.0962118416403295,0.350630706544707,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,9.60078132449013,13.8097570952153,21.1971339972577,12.5452823110892,17.8121455140367,21.1510291269116,22.2757425076496,17.5625269257446,18.1256963593682,26.9235362110946,0.62272408550506,1.19707462020309,2.90247129782028,0.972426868273176,2.51535795153579,2.20612210140017,2.00022055021454,2.67845574410562,1.28367683836726,2.77966932940177,2.28131369901216,0.943131706930381,2.71560371662659,1.60062881012173,1.32101578597911,1.42888107384922,1.85414921511769,2.12200142510076,0.824171801606613,2.50238164228475,1.71434626192708,1.4198064492747,1.43061713968393,1.45346416632329,1.69396884747595,1.35383372626682,1.46342378298218,1.31534855718921,1.7654534799962,1.68342681497322,0.593175090620871,1.28055827088233,1.63692417267876,1.39443157067369,2.70069255373598,3.99696924700713,0.935726433781634,2.36358159453128,0.191288332068843,0.441182838239031,0.463735671240843
|phase1_expression=2.40223270657191,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,1.43752564364972,0.167782606057736,0,0,0,0,0,10.1158230429799,17.4567023159771,19.0149421051854,0,0,0,0,0,0.599200221036809,0.768436610643109,8.19147937236973,13.7706057098324,10.0955981448663,10.8547374073445,16.1234034894678,12.7390431183552,11.3097655801519,14.7075005857603,5.50579404996943,7.15049093277051,6.60508093001847,12.265424758908,16.1933129176265,13.022834263919,5.30447698102624,4.50210088025344,5.65353516774197,12.6690291753677,7.26095572075425,13.6071595452469,0.075726193333184,0.151143120213571,0,0,0.679971333707751,0,0,0,0.561777680527007,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,1.33597925158342,1.90833859442749,6.39377504455497,5.30415643688935,4.6724018571313,5.87943535678524,2.63899841792318,0,0,0,0,0,0,0,4.09893115816166,4.60782754989601,0,0,0,0.127070227073065,4.34392854273986,7.32000964509802,11.9371634507221,11.8200537730748,12.7857728665165,8.93488591606108,8.27430441645564,0.509196819251581,0,0,0,0.130120442962704,1.14951052216736,1.44049703844279,1.35634336052144,1.29269348387523,1.2811372028485,1.78033276663485,2.06962696591213,0.215567992932842,0.567318240503458,0.351902248327898,0.219195732427575,0.278047249225598,0,0.411564272815887,0.59710280045548,0,0,0,0.621377317606506,0.703578179943289,0.900310307305074,0.946978942340841,0.393528463494808,0.154267112887378,0.465067889500816,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.162137619091711,0,0.439100230582101,0.134206418760372,5.25724871410318,9.98174740079059,0,0,1.49301775374664,0.696710015581316,0.38660238396628,0.201683524623343,0.444756087689741,0.380451252225118,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.456994050438915,2.25415471346161,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.848725428875941,0.234690248288502,0.167506257441816,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,3.85321415970701,5.39173758324135,0,0,0,0,0,0.477937595905104,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,7.06906896127976,1.41940085208269,0.890328018336276,0.488660878060728,0.329940245945071,0,0.242780636154981,0.604647113929502,0.565815239267694,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.822745103010605,0.304464949114599,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,3.33765543618917,0,0.82554747185289,0,0.188368457004691,0,0.228778173206523,0,0.139951452323658,0,0,0.790839983952838,1.21991680276109,0.108005340821801,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0.598066184175915,0.992750942742586,0.777804753376191,0.904118764344118,1.18269287843545,0.352071715937262,0.39061315453185,0.209718688851422,0,0,0.632022241256357,0.202725215290164,0.410843828659309,0.909445760844565,0.537080087002444,0.79472541912506,0.480781798079875,0.295379054349154,0.201932899896295,0.304827226619999,0.100826185136841,0.194915761479505,0.0962118416403295,0.350630706544707,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,9.60078132449013,13.8097570952153,21.1971339972577,12.5452823110892,17.8121455140367,21.1510291269116,22.2757425076496,17.5625269257446,18.1256963593682,26.9235362110946,0.62272408550506,1.19707462020309,2.90247129782028,0.972426868273176,2.51535795153579,2.20612210140017,2.00022055021454,2.67845574410562,1.28367683836726,2.77966932940177,2.28131369901216,0.943131706930381,2.71560371662659,1.60062881012173,1.32101578597911,1.42888107384922,1.85414921511769,2.12200142510076,0.824171801606613,2.50238164228475,1.71434626192708,1.4198064492747,1.43061713968393,1.45346416632329,1.69396884747595,1.35383372626682,1.46342378298218,1.31534855718921,1.7654534799962,1.68342681497322,0.593175090620871,1.28055827088233,1.63692417267876,1.39443157067369,2.70069255373598,3.99696924700713,0.935726433781634,2.36358159453128,0.191288332068843,0.441182838239031,0.463735671240843
|short_description=p2@Rab33a
}}
}}

Latest revision as of 21:12, 1 October 2015

Short description:p2@Rab33a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab33a_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 6bp_to_NM_011228, uc009tci.1_5end
EntrezGene:Rab33a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab33a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.12
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.77
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.12
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.27
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F54.67
adrenal gland, neonate N00.CNhs11191.1311-23C15.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I24.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F111.94
cortex, adult.CNhs10473.12-14D511.82
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G19.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.92
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter5.22e-3034
regional part of nervous system2.48e-2854
neural tube1.71e-2652
neural rod1.71e-2652
future spinal cord1.71e-2652
neural keel1.71e-2652
neurectoderm3.70e-2664
neural plate3.70e-2664
presumptive neural plate3.70e-2664
central nervous system8.56e-2673
brain grey matter6.65e-2529
regional part of telencephalon6.65e-2529
telencephalon6.65e-2529
nervous system1.25e-2475
ecto-epithelium5.15e-2273
brain8.12e-2247
future brain8.12e-2247
ectoderm-derived structure1.28e-2195
ectoderm1.28e-2195
presumptive ectoderm1.28e-2195
pre-chordal neural plate3.23e-2149
regional part of brain5.36e-2146
structure with developmental contribution from neural crest7.11e-2192
anterior neural tube1.32e-1940
regional part of forebrain6.79e-1939
forebrain6.79e-1939
future forebrain6.79e-1939
cerebral cortex1.15e-1721
cerebral hemisphere1.15e-1721
pallium1.15e-1721
regional part of cerebral cortex5.82e-1417
occipital lobe4.01e-1210
visual cortex4.01e-1210
neocortex4.01e-1210
basal ganglion2.54e-088
nuclear complex of neuraxis2.54e-088
aggregate regional part of brain2.54e-088
collection of basal ganglia2.54e-088
cerebral subcortex2.54e-088
posterior neural tube2.15e-0712
chordal neural plate2.15e-0712
spinal cord8.36e-076
dorsal region element8.36e-076
dorsum8.36e-076
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