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FFCP PHASE1:Mm9::chrX:45872589..45872651,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chrX:45872589..45872651,+
|DHSsupport=NA
|short_description=p1@Rab33a
|DPIdataset=NA
|description=CAGE_peak_1_at_Rab33a_5end
|association_with_transcript=0bp_to_NM_011228,uc009tci.1_5end
|EntrezGene=19337
|EntrezGene=19337
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=P97950,Q3SXA7
|UniProt=P97950,Q3SXA7
|association_with_transcript=0bp_to_NM_011228,uc009tci.1_5end
|cluster_id=chrX:45872589..45872651,+
|description=CAGE_peak_1_at_Rab33a_5end
|id=chrX:45872589..45872651,+
|ontology_enrichment_celltype=CL:0000117!1.13e-13!23;CL:0000337!1.13e-13!23;CL:0000540!1.19e-10!33;CL:0000047!1.19e-10!33;CL:0000031!1.19e-10!33;CL:0000404!1.19e-10!33;CL:0000393!7.18e-07!39;CL:0000211!7.18e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,6.39e-16,23;CL:0000337,6.39e-16,23;CL:0000540,1.32e-10,33;CL:0000047,1.32e-10,33;CL:0000031,1.32e-10,33;CL:0000404,1.32e-10,33;CL:0000393,2.57e-07,39;CL:0000211,2.57e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.25e-23!71;UBERON:0003075!3.25e-23!71;UBERON:0007284!3.25e-23!71;UBERON:0001017!1.10e-19!73;UBERON:0005743!1.10e-19!73;UBERON:0001049!6.09e-19!52;UBERON:0005068!6.09e-19!52;UBERON:0006241!6.09e-19!52;UBERON:0007135!6.09e-19!52;UBERON:0000073!1.09e-18!75;UBERON:0001016!1.09e-18!75;UBERON:0002020!2.42e-18!34;UBERON:0004121!9.70e-18!102;UBERON:0000924!9.70e-18!102;UBERON:0006601!9.70e-18!102;UBERON:0000955!1.20e-17!50;UBERON:0006238!1.20e-17!50;UBERON:0000033!1.64e-17!63;UBERON:0002616!4.94e-17!49;UBERON:0003056!4.95e-16!49;UBERON:0002791!2.19e-15!29;UBERON:0003528!2.19e-15!29;UBERON:0001893!2.19e-15!29;UBERON:0003080!2.22e-15!40;UBERON:0007811!8.11e-15!86;UBERON:0002780!8.57e-15!39;UBERON:0001890!8.57e-15!39;UBERON:0006240!8.57e-15!39;UBERON:0000153!1.79e-13!94;UBERON:0000956!4.39e-11!21;UBERON:0001869!4.39e-11!21;UBERON:0000203!4.39e-11!21;UBERON:0002619!6.83e-09!17;UBERON:0002021!2.75e-08!10;UBERON:0000411!2.75e-08!10;UBERON:0001950!2.75e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.26e-23,54;UBERON:0001049,5.94e-22,52;UBERON:0005068,5.94e-22,52;UBERON:0006241,5.94e-22,52;UBERON:0007135,5.94e-22,52;UBERON:0010314,7.38e-22,92;UBERON:0002020,2.12e-21,34;UBERON:0002346,2.20e-21,64;UBERON:0003075,2.20e-21,64;UBERON:0007284,2.20e-21,64;UBERON:0001017,6.51e-20,73;UBERON:0001016,1.03e-18,75;UBERON:0000955,1.36e-18,47;UBERON:0006238,1.36e-18,47;UBERON:0003528,6.78e-18,29;UBERON:0002791,6.78e-18,29;UBERON:0001893,6.78e-18,29;UBERON:0002616,6.96e-18,46;UBERON:0010371,2.15e-17,73;UBERON:0003080,4.34e-17,40;UBERON:0003056,4.56e-17,49;UBERON:0002780,2.11e-16,39;UBERON:0001890,2.11e-16,39;UBERON:0006240,2.11e-16,39;UBERON:0004121,8.35e-15,95;UBERON:0000924,8.35e-15,95;UBERON:0006601,8.35e-15,95;UBERON:0000956,8.56e-13,21;UBERON:0001869,8.56e-13,21;UBERON:0000203,8.56e-13,21;UBERON:0002619,3.37e-10,17;UBERON:0002021,1.55e-09,10;UBERON:0000411,1.55e-09,10;UBERON:0001950,1.55e-09,10
|phase1_expression=3.20297694209588,0,0,0,0,0.33575854382378,0,0.129123323441576,0.140788722151667,0,0.513653904676515,0.319088635981346,0.171200729931206,0,0.333109761815663,0,0,0,0,0,3.99703463710028,0,0,0.159992422793407,0.45881856213434,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.979904951377538,0,0,0,0,0,0.573066879877513,0,19.4223802425214,24.3335850465135,27.2547503507657,0.677689064138264,0,0,1.97773272513395,0,0.599200221036809,0.768436610643109,16.6940275816649,22.1409738863973,20.6118462124354,21.4238238302853,25.8416192913388,25.8455586343553,20.1275489138296,21.1420320920305,13.2139057199266,17.4931653176707,20.4296689230804,24.7946220932764,25.7995154958795,18.7528813400434,16.4717969410815,14.069065250792,12.3766580699216,15.0260578591571,21.4981238006645,23.2999307281626,0,0.604572480854284,0.579728977403356,0,0.679971333707751,0,0,0,1.12355536105401,0,0,0,1.69012103732017,0,0,0,0,0,0.505524445014783,0.11418387971906,0,7.71899123137089,5.55153045651635,18.5723941770406,14.2981608298756,18.8403300690778,12.6995803706561,10.8073268543521,0,0.289198713839823,0,0.161766849947409,0,0,0,18.1524094147159,18.2218634927706,0,0.11981512450592,0.599902730993408,0,21.5698520742945,19.2150253183823,29.2774640422974,25.3783507480724,36.0558794835766,19.1165000994795,21.5780879880118,1.32391173005411,0.124406970610093,0,0.420883711772948,0.780722657776222,1.37941262660084,2.70093194708024,2.56198190320716,2.51735046859913,3.58718416797579,3.65436725782942,3.10444044886819,1.07783996466421,1.13463648100692,0.879755620819744,1.97276159184817,0.556094498451196,0,0.411564272815887,1.39323986772945,0,0.257347907114715,0,2.07125772535502,2.34526059981096,1.08037236876609,2.13070262026689,1.77087808572663,1.69693824176116,1.39520366850245,1.07309360559848,1.40118410840603,0.822799249567402,0,0.162137619091711,0.877199924551994,1.09775057645525,1.20785776884335,17.2437757822584,16.9792610425819,0,0,1.2797295032114,1.62565670302307,1.28867461322093,0.80673409849337,1.33426826306922,0.760902504450237,0,0.658795818896044,1.25667604400135,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,1.25673363870702,0,0.203651327845314,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0,0,1.43768206527355,0,0,0,0,0,0,1.13694847062291,0.977789858652155,0.848725428875941,0.938760993154008,0.502518772325447,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.578596234326046,1.50791283939272,2.17562273527484,0,0,16.6972613587304,19.6915633474901,0,0,0.94652465824877,1.56175497718655,1.29254038639679,0.477937595905104,0.891194696329576,0,0.404810701674894,1.46127928955656,0.395287777946524,23.1351347823701,3.83238230062325,1.6025904330053,1.95464351224291,0.494910368917606,0,2.42780636154981,1.51161778482376,1.32023555829129,1.18120757152309,0.922305443831782,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,1.8006109403131,2.19909762430683,1.28602221018955,0.886701168211368,1.60531935841864,1.64549020602121,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0.603129249281559,0,0,0,17.8008289930089,0,0.82554747185289,0.185194527369712,0.376736914009382,0.136694227721025,0,0.169978429993855,0.279902904647316,0,0,3.00519193902079,1.82987520414164,0.756037385752609,1.04544148007234,0.655087691238533,0.539457385539283,0.41326727862668,0.26175594198403,0.259229946583586,0,0,0.897099276263873,1.48912641411388,2.33341426012857,2.84151611651008,3.54807863530634,1.5256441023948,0.39061315453185,0.419437377702843,0.483168241652012,0,2.21207784439725,1.41907650703115,1.74608627180206,4.67714962720062,3.40150721768215,3.3775830312815,1.80293174279953,1.32920574457119,2.72609414859999,1.67654974641,2.72230699869469,1.75424185331554,1.53938946624527,0.818138315270983,0.226730383615211,0.665957860122194,0,0,0.579568782096571,0.750729901804728,0.36630324853453,0,0,27.6728402882363,33.6037422650239,32.6550442660456,28.0120687220211,35.6242910280734,29.4603619981983,27.0009000092722,34.2244114450408,36.7045351277206,43.4918661871529,1.97195960409936,3.99024873401031,3.75613932659095,2.91728060481953,6.28839487883947,4.22840069435032,3.77819437262746,4.73880631649457,5.77654577265267,3.79045817645696,3.54871019846336,3.77252682772152,3.46473577638565,3.58540853467268,3.73330548211486,4.28664322154766,5.09891034157364,2.12200142510076,3.70877310722976,3.97437084362873,3.42869252385415,3.90446773550542,5.96090474868302,3.19762116591123,3.76437521661322,3.72304274723377,5.12198324043763,2.10455769150274,3.80251518768413,3.92799590160417,4.62676570684279,3.94017929502254,6.95692773388472,2.94379998253335,3.2794123866794,10.4920442733937,4.21076895201735,1.93383948643468,1.14772999241306,1.54413993383661,0.463735671240843
|phase1_expression=3.20297694209588,0,0,0,0,0.33575854382378,0,0.129123323441576,0.140788722151667,0,0.513653904676515,0.319088635981346,0.171200729931206,0,0.333109761815663,0,0,0,0,0,3.99703463710028,0,0,0.159992422793407,0.45881856213434,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.979904951377538,0,0,0,0,0,0.573066879877513,0,19.4223802425214,24.3335850465135,27.2547503507657,0.677689064138264,0,0,1.97773272513395,0,0.599200221036809,0.768436610643109,16.6940275816649,22.1409738863973,20.6118462124354,21.4238238302853,25.8416192913388,25.8455586343553,20.1275489138296,21.1420320920305,13.2139057199266,17.4931653176707,20.4296689230804,24.7946220932764,25.7995154958795,18.7528813400434,16.4717969410815,14.069065250792,12.3766580699216,15.0260578591571,21.4981238006645,23.2999307281626,0,0.604572480854284,0.579728977403356,0,0.679971333707751,0,0,0,1.12355536105401,0,0,0,1.69012103732017,0,0,0,0,0,0.505524445014783,0.11418387971906,0,7.71899123137089,5.55153045651635,18.5723941770406,14.2981608298756,18.8403300690778,12.6995803706561,10.8073268543521,0,0.289198713839823,0,0.161766849947409,0,0,0,18.1524094147159,18.2218634927706,0,0.11981512450592,0.599902730993408,0,21.5698520742945,19.2150253183823,29.2774640422974,25.3783507480724,36.0558794835766,19.1165000994795,21.5780879880118,1.32391173005411,0.124406970610093,0,0.420883711772948,0.780722657776222,1.37941262660084,2.70093194708024,2.56198190320716,2.51735046859913,3.58718416797579,3.65436725782942,3.10444044886819,1.07783996466421,1.13463648100692,0.879755620819744,1.97276159184817,0.556094498451196,0,0.411564272815887,1.39323986772945,0,0.257347907114715,0,2.07125772535502,2.34526059981096,1.08037236876609,2.13070262026689,1.77087808572663,1.69693824176116,1.39520366850245,1.07309360559848,1.40118410840603,0.822799249567402,0,0.162137619091711,0.877199924551994,1.09775057645525,1.20785776884335,17.2437757822584,16.9792610425819,0,0,1.2797295032114,1.62565670302307,1.28867461322093,0.80673409849337,1.33426826306922,0.760902504450237,0,0.658795818896044,1.25667604400135,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0.569003702859245,1.25673363870702,0,0.203651327845314,0.193952487167626,0.280543279561274,0.0632365371242573,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0.50925170356284,0,0,0,1.43768206527355,0,0,0,0,0,0,1.13694847062291,0.977789858652155,0.848725428875941,0.938760993154008,0.502518772325447,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0.172684981865896,0.578596234326046,1.50791283939272,2.17562273527484,0,0,16.6972613587304,19.6915633474901,0,0,0.94652465824877,1.56175497718655,1.29254038639679,0.477937595905104,0.891194696329576,0,0.404810701674894,1.46127928955656,0.395287777946524,23.1351347823701,3.83238230062325,1.6025904330053,1.95464351224291,0.494910368917606,0,2.42780636154981,1.51161778482376,1.32023555829129,1.18120757152309,0.922305443831782,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,1.8006109403131,2.19909762430683,1.28602221018955,0.886701168211368,1.60531935841864,1.64549020602121,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0.603129249281559,0,0,0,17.8008289930089,0,0.82554747185289,0.185194527369712,0.376736914009382,0.136694227721025,0,0.169978429993855,0.279902904647316,0,0,3.00519193902079,1.82987520414164,0.756037385752609,1.04544148007234,0.655087691238533,0.539457385539283,0.41326727862668,0.26175594198403,0.259229946583586,0,0,0.897099276263873,1.48912641411388,2.33341426012857,2.84151611651008,3.54807863530634,1.5256441023948,0.39061315453185,0.419437377702843,0.483168241652012,0,2.21207784439725,1.41907650703115,1.74608627180206,4.67714962720062,3.40150721768215,3.3775830312815,1.80293174279953,1.32920574457119,2.72609414859999,1.67654974641,2.72230699869469,1.75424185331554,1.53938946624527,0.818138315270983,0.226730383615211,0.665957860122194,0,0,0.579568782096571,0.750729901804728,0.36630324853453,0,0,27.6728402882363,33.6037422650239,32.6550442660456,28.0120687220211,35.6242910280734,29.4603619981983,27.0009000092722,34.2244114450408,36.7045351277206,43.4918661871529,1.97195960409936,3.99024873401031,3.75613932659095,2.91728060481953,6.28839487883947,4.22840069435032,3.77819437262746,4.73880631649457,5.77654577265267,3.79045817645696,3.54871019846336,3.77252682772152,3.46473577638565,3.58540853467268,3.73330548211486,4.28664322154766,5.09891034157364,2.12200142510076,3.70877310722976,3.97437084362873,3.42869252385415,3.90446773550542,5.96090474868302,3.19762116591123,3.76437521661322,3.72304274723377,5.12198324043763,2.10455769150274,3.80251518768413,3.92799590160417,4.62676570684279,3.94017929502254,6.95692773388472,2.94379998253335,3.2794123866794,10.4920442733937,4.21076895201735,1.93383948643468,1.14772999241306,1.54413993383661,0.463735671240843
|short_description=p1@Rab33a
}}
}}

Latest revision as of 21:11, 1 October 2015

Short description:p1@Rab33a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab33a_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_NM_011228, uc009tci.1_5end
EntrezGene:Rab33a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab33a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C319.42
Mouse Granule cells, donor2.CNhs12357.11731-123E324.33
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.69
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D920.61
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.84
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.85
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.13
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.43
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.50
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D77.72
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D618.57
adrenal gland, embryo E17.CNhs11043.1263-45I114.30
adrenal gland, embryo E18.CNhs11026.1262-18F518.84
adrenal gland, neonate N00.CNhs11191.1311-23C112.70
adrenal gland, neonate N25.CNhs11223.1377-27I310.81
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B218.15
cerebellum, neonate N30.CNhs11135.1395-42I218.22
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A421.57
corpus striatum, adult.CNhs10487.19-21D819.22
corpus striatum, neonate N00.CNhs11226.630-43F129.28
cortex, adult.CNhs10473.12-14D525.38
cortex, neonate N30.CNhs11107.1392-42F236.06
diencephalon, adult.CNhs10482.20-12F219.12
diencephalon, neonate N30.CNhs11201.1388-42B221.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E73.59
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E817.24
hippocampus, neonate N00.CNhs11228.627-43G116.98
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C216.70
medulla oblongata, neonate N30.CNhs11200.1396-42A319.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I923.14
ovary, adult.CNhs10507.91-2I73.83
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C917.80
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C54.68
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C42.73
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A435.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A836.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A943.49
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.90
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.39e-1623
neuroblast (sensu Vertebrata)6.39e-1623
neuron1.32e-1033
neuronal stem cell1.32e-1033
neuroblast1.32e-1033
electrically signaling cell1.32e-1033
electrically responsive cell2.57e-0739
electrically active cell2.57e-0739

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.26e-2354
neural tube5.94e-2252
neural rod5.94e-2252
future spinal cord5.94e-2252
neural keel5.94e-2252
structure with developmental contribution from neural crest7.38e-2292
gray matter2.12e-2134
neurectoderm2.20e-2164
neural plate2.20e-2164
presumptive neural plate2.20e-2164
central nervous system6.51e-2073
nervous system1.03e-1875
brain1.36e-1847
future brain1.36e-1847
brain grey matter6.78e-1829
regional part of telencephalon6.78e-1829
telencephalon6.78e-1829
regional part of brain6.96e-1846
ecto-epithelium2.15e-1773
anterior neural tube4.34e-1740
pre-chordal neural plate4.56e-1749
regional part of forebrain2.11e-1639
forebrain2.11e-1639
future forebrain2.11e-1639
ectoderm-derived structure8.35e-1595
ectoderm8.35e-1595
presumptive ectoderm8.35e-1595
cerebral cortex8.56e-1321
cerebral hemisphere8.56e-1321
pallium8.56e-1321
regional part of cerebral cortex3.37e-1017
occipital lobe1.55e-0910
visual cortex1.55e-0910
neocortex1.55e-0910
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