FFCP PHASE1:Mm9::chr19:10679900..10679956,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225913 | |EntrezGene=225913 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UTZ4 | |UniProt=Q3UTZ4 | ||
|association_with_transcript=0bp_to_ENSMUST00000164576,uc008gqk.1_5end | |association_with_transcript=0bp_to_ENSMUST00000164576,uc008gqk.1_5end | ||
|cluster_id=chr19:10679900..10679956,- | |||
|description=CAGE_peak_2_at_Dak_5end | |description=CAGE_peak_2_at_Dak_5end | ||
|id=chr19:10679900..10679956,- | |id=chr19:10679900..10679956,- | ||
|ontology_enrichment_celltype=CL:0000117!2.86e-07!23;CL:0000337!2.86e-07!23 | |ontology_enrichment_celltype=CL:0000117!2.86e-07!23;CL:0000337!2.86e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.86e-07,23;CL:0000337,2.86e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!9.44e-21!86;UBERON:0000153!2.94e-18!94;UBERON:0000955!4.95e-18!50;UBERON:0006238!4.95e-18!50;UBERON:0002616!8.54e-18!49;UBERON:0001049!1.62e-17!52;UBERON:0005068!1.62e-17!52;UBERON:0006241!1.62e-17!52;UBERON:0007135!1.62e-17!52;UBERON:0003056!3.00e-17!49;UBERON:0001017!3.39e-17!73;UBERON:0005743!3.39e-17!73;UBERON:0003080!1.36e-16!40;UBERON:0000033!2.08e-16!63;UBERON:0002346!3.39e-16!71;UBERON:0003075!3.39e-16!71;UBERON:0007284!3.39e-16!71;UBERON:0000073!3.44e-16!75;UBERON:0001016!3.44e-16!75;UBERON:0002780!3.81e-16!39;UBERON:0001890!3.81e-16!39;UBERON:0006240!3.81e-16!39;UBERON:0002791!6.18e-13!29;UBERON:0003528!6.18e-13!29;UBERON:0001893!6.18e-13!29;UBERON:0002020!1.41e-12!34;UBERON:0004121!3.88e-12!102;UBERON:0000924!3.88e-12!102;UBERON:0006601!3.88e-12!102;UBERON:0000956!3.00e-10!21;UBERON:0001869!3.00e-10!21;UBERON:0000203!3.00e-10!21;UBERON:0002619!8.33e-09!17;UBERON:0000475!3.07e-08!200;UBERON:0000477!3.84e-08!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,8.32e-18,47;UBERON:0006238,8.32e-18,47;UBERON:0000073,1.12e-17,54;UBERON:0002616,1.41e-17,46;UBERON:0001049,1.62e-17,52;UBERON:0005068,1.62e-17,52;UBERON:0006241,1.62e-17,52;UBERON:0007135,1.62e-17,52;UBERON:0002346,2.18e-17,64;UBERON:0003075,2.18e-17,64;UBERON:0007284,2.18e-17,64;UBERON:0003056,3.00e-17,49;UBERON:0001017,3.39e-17,73;UBERON:0003080,1.36e-16,40;UBERON:0001016,3.44e-16,75;UBERON:0002780,3.81e-16,39;UBERON:0001890,3.81e-16,39;UBERON:0006240,3.81e-16,39;UBERON:0003528,6.18e-13,29;UBERON:0002791,6.18e-13,29;UBERON:0001893,6.18e-13,29;UBERON:0004121,1.31e-12,95;UBERON:0000924,1.31e-12,95;UBERON:0006601,1.31e-12,95;UBERON:0002020,1.41e-12,34;UBERON:0010371,2.72e-11,73;UBERON:0000956,3.00e-10,21;UBERON:0001869,3.00e-10,21;UBERON:0000203,3.00e-10,21;UBERON:0002619,8.33e-09,17;UBERON:0010314,7.78e-08,92 | |||
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| ||
|short_description=p2@Dak | |short_description=p2@Dak | ||
}} | }} |
Latest revision as of 20:44, 1 October 2015
Short description: | p2@Dak |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dak_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000164576, uc008gqk.1_5end |
EntrezGene: | Dak |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.86e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.86e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
brain | 8.32e-18 | 47 |
future brain | 8.32e-18 | 47 |
regional part of nervous system | 1.12e-17 | 54 |
regional part of brain | 1.41e-17 | 46 |
neural tube | 1.62e-17 | 52 |
neural rod | 1.62e-17 | 52 |
future spinal cord | 1.62e-17 | 52 |
neural keel | 1.62e-17 | 52 |
neurectoderm | 2.18e-17 | 64 |
neural plate | 2.18e-17 | 64 |
presumptive neural plate | 2.18e-17 | 64 |
pre-chordal neural plate | 3.00e-17 | 49 |
central nervous system | 3.39e-17 | 73 |
anterior neural tube | 1.36e-16 | 40 |
nervous system | 3.44e-16 | 75 |
regional part of forebrain | 3.81e-16 | 39 |
forebrain | 3.81e-16 | 39 |
future forebrain | 3.81e-16 | 39 |
brain grey matter | 6.18e-13 | 29 |
regional part of telencephalon | 6.18e-13 | 29 |
telencephalon | 6.18e-13 | 29 |
ectoderm-derived structure | 1.31e-12 | 95 |
ectoderm | 1.31e-12 | 95 |
presumptive ectoderm | 1.31e-12 | 95 |
gray matter | 1.41e-12 | 34 |
ecto-epithelium | 2.72e-11 | 73 |
cerebral cortex | 3.00e-10 | 21 |
cerebral hemisphere | 3.00e-10 | 21 |
pallium | 3.00e-10 | 21 |
regional part of cerebral cortex | 8.33e-09 | 17 |
structure with developmental contribution from neural crest | 7.78e-08 | 92 |