FFCP PHASE1:Mm9::chr8:25707432..25707448,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15930 | |EntrezGene=15930 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1615 | |||
|TSSclassifier=NA | |||
|UniProt=P28776 | |UniProt=P28776 | ||
|association_with_transcript=32bp_to_ENSMUST00000033956,NM_008324,uc009lfa.1_5end | |||
|cluster_id=chr8:25707432..25707448,- | |||
|description=CAGE_peak_2_at_Ido1_5end | |||
|id=chr8:25707432..25707448,- | |||
|ontology_enrichment_celltype=CL:0002563!5.03e-15!9;CL:0002251!5.03e-15!9;CL:0000239!1.35e-13!6;CL:0000677!1.35e-13!6;CL:0000212!1.35e-13!6;CL:0000584!1.35e-13!6;CL:0000075!1.52e-11!7;CL:0000066!5.94e-09!25;CL:0002076!1.88e-08!15;CL:0000473!7.33e-08!3;CL:0000627!7.33e-08!3;CL:0000682!7.33e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.58e-11,6;CL:0000677,1.58e-11,6;CL:0000584,1.58e-11,6;CL:0000075,6.67e-10,7;CL:0002563,9.94e-08,9;CL:0002251,9.94e-08,9;CL:0000682,7.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.15e-28!15;UBERON:0001242!7.70e-24!13;UBERON:0000060!7.70e-24!13;UBERON:0001262!7.70e-24!13;UBERON:0004786!7.70e-24!13;UBERON:0004923!2.13e-21!24;UBERON:0000160!2.25e-15!43;UBERON:0003350!5.03e-15!9;UBERON:0004808!5.03e-15!9;UBERON:0001277!5.03e-15!9;UBERON:0005409!2.09e-12!59;UBERON:0000485!4.91e-12!11;UBERON:0004119!7.49e-09!130;UBERON:0000925!7.49e-09!130;UBERON:0006595!7.49e-09!130;UBERON:0004175!1.35e-08!9;UBERON:0000331!3.88e-08!3;UBERON:0002116!3.88e-08!3;UBERON:0001204!3.88e-08!3;UBERON:0001168!3.88e-08!3;UBERON:0001007!1.81e-07!128;UBERON:0001555!1.81e-07!128;UBERON:0007026!1.81e-07!128;UBERON:0007023!4.62e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.09e-27,15;UBERON:0000160,3.67e-21,31;UBERON:0001242,2.88e-20,13;UBERON:0001262,2.88e-20,13;UBERON:0004786,2.88e-20,13;UBERON:0004923,1.86e-16,24;UBERON:0000331,1.32e-13,3;UBERON:0002116,1.32e-13,3;UBERON:0001204,1.32e-13,3;UBERON:0001168,1.32e-13,3;UBERON:0005409,3.21e-13,47;UBERON:0002108,2.48e-10,4;UBERON:0000080,5.10e-10,4;UBERON:0005904,5.10e-10,4;UBERON:0006947,5.10e-10,4;UBERON:0002120,5.10e-10,4;UBERON:0004054,5.10e-10,4;UBERON:0004875,5.10e-10,4;UBERON:0004876,5.10e-10,4;UBERON:0005721,5.10e-10,4;UBERON:0005754,5.10e-10,4;UBERON:0007297,5.10e-10,4;UBERON:0001155,1.35e-09,2;UBERON:0000059,1.35e-09,2;UBERON:0001962,1.49e-09,2;UBERON:0001961,1.49e-09,2;UBERON:0001744,1.49e-09,2;UBERON:0007023,1.89e-08,51;UBERON:0003350,9.94e-08,9;UBERON:0004808,9.94e-08,9;UBERON:0001277,9.94e-08,9 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,1.20985684522732,0.500895729946347,18.4667199103079,14.4839837169226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,5.59973479776923,6.42345986988076,0.57423196411502,15.0766698655676,7.11055067863434,7.79096019771133,10.837295579677,2.21730510655305,0,0,0,0,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,16.6047085885584,0,0,0,0,0,0,0,0,0,0,0,1.49288364732112,48.0173241023982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7814087237848,1.32225283331772,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,3.24207074812041,2.38969527905241,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.93841237725591,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,0.454999239389536,1.20985684522732,0.500895729946347,18.4667199103079,14.4839837169226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,5.59973479776923,6.42345986988076,0.57423196411502,15.0766698655676,7.11055067863434,7.79096019771133,10.837295579677,2.21730510655305,0,0,0,0,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,16.6047085885584,0,0,0,0,0,0,0,0,0,0,0,1.49288364732112,48.0173241023982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.7814087237848,1.32225283331772,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,3.24207074812041,2.38969527905241,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.93841237725591,0,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@Ido1 | |||
}} | }} |
Latest revision as of 20:42, 1 October 2015
Short description: | p2@Ido1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ido1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1615 |
Association with transcript: | 32bp_to_ENSMUST00000033956, NM_008324, uc009lfa.1_5end |
EntrezGene: | Ido1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.58e-11 | 6 |
gut absorptive cell | 1.58e-11 | 6 |
enterocyte | 1.58e-11 | 6 |
columnar/cuboidal epithelial cell | 6.67e-10 | 7 |
intestinal epithelial cell | 9.94e-08 | 9 |
epithelial cell of alimentary canal | 9.94e-08 | 9 |
M cell of gut | 7.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.09e-27 | 15 |
intestine | 3.67e-21 | 31 |
intestinal mucosa | 2.88e-20 | 13 |
wall of intestine | 2.88e-20 | 13 |
gastrointestinal system mucosa | 2.88e-20 | 13 |
organ component layer | 1.86e-16 | 24 |
ileal mucosa | 1.32e-13 | 3 |
ileum | 1.32e-13 | 3 |
mucosa of small intestine | 1.32e-13 | 3 |
wall of small intestine | 1.32e-13 | 3 |
gastrointestinal system | 3.21e-13 | 47 |
small intestine | 2.48e-10 | 4 |
mesonephros | 5.10e-10 | 4 |
duct of male reproductive system | 5.10e-10 | 4 |
male genital duct | 5.10e-10 | 4 |
pronephros | 5.10e-10 | 4 |
internal male genitalia | 5.10e-10 | 4 |
nephrogenic cord | 5.10e-10 | 4 |
urogenital ridge | 5.10e-10 | 4 |
pronephric mesoderm | 5.10e-10 | 4 |
rostral part of nephrogenic cord | 5.10e-10 | 4 |
presumptive pronephric mesoderm | 5.10e-10 | 4 |
colon | 1.35e-09 | 2 |
large intestine | 1.35e-09 | 2 |
gut-associated lymphoid tissue | 1.49e-09 | 2 |
mucosa-associated lymphoid tissue | 1.49e-09 | 2 |
lymphoid tissue | 1.49e-09 | 2 |
adult organism | 1.89e-08 | 51 |
epithelium of mucosa | 9.94e-08 | 9 |
gastrointestinal system epithelium | 9.94e-08 | 9 |
intestinal epithelium | 9.94e-08 | 9 |